Query 014010
Match_columns 432
No_of_seqs 237 out of 2456
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 00:58:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014010.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014010hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK04201 zinc transporter ZupT 100.0 1E-38 2.2E-43 312.1 27.5 250 71-415 3-265 (265)
2 PF02535 Zip: ZIP Zinc transpo 100.0 1.3E-32 2.7E-37 274.0 26.3 277 83-410 12-316 (317)
3 COG0428 Predicted divalent hea 100.0 1.9E-32 4.1E-37 267.5 25.3 246 70-415 5-265 (266)
4 PLN02159 Fe(2+) transport prot 99.9 1E-24 2.2E-29 219.2 27.0 135 275-411 183-334 (337)
5 TIGR00820 zip ZIP zinc/iron tr 99.9 1.9E-24 4E-29 217.1 22.5 136 275-412 170-322 (324)
6 KOG1558 Fe2+/Zn2+ regulated tr 99.9 1.1E-23 2.4E-28 210.0 23.3 276 84-412 28-325 (327)
7 COG0428 Predicted divalent hea 99.9 2.1E-24 4.6E-29 210.9 15.7 144 9-154 118-264 (266)
8 PRK04201 zinc transporter ZupT 99.9 4.4E-24 9.6E-29 209.0 16.8 142 10-153 120-263 (265)
9 KOG2694 Putative zinc transpor 99.9 2.5E-22 5.5E-27 189.1 21.8 267 72-412 64-358 (361)
10 PF02535 Zip: ZIP Zinc transpo 99.9 5.3E-22 1.2E-26 197.6 14.5 137 10-150 171-316 (317)
11 KOG2693 Putative zinc transpor 99.9 1.2E-22 2.6E-27 209.8 7.4 141 270-410 297-449 (453)
12 TIGR00820 zip ZIP zinc/iron tr 99.8 1.6E-18 3.4E-23 174.3 16.3 138 12-153 172-323 (324)
13 PLN02159 Fe(2+) transport prot 99.8 2.5E-18 5.3E-23 173.1 16.0 139 11-153 184-336 (337)
14 KOG2693 Putative zinc transpor 99.7 5.9E-18 1.3E-22 175.2 5.2 142 9-152 301-451 (453)
15 KOG1558 Fe2+/Zn2+ regulated tr 99.7 2.9E-16 6.3E-21 157.0 14.4 141 9-153 174-326 (327)
16 KOG2694 Putative zinc transpor 99.6 1.5E-14 3.2E-19 136.9 9.8 147 6-154 207-360 (361)
17 KOG2474 Zinc transporter and r 99.5 2.1E-15 4.6E-20 150.3 3.5 131 280-410 249-400 (406)
18 KOG2474 Zinc transporter and r 99.0 1E-10 2.2E-15 117.2 1.6 142 9-153 243-403 (406)
19 KOG3907 ZIP-like zinc transpor 98.9 2.7E-11 6E-16 113.9 -5.0 130 280-409 145-296 (303)
20 KOG3907 ZIP-like zinc transpor 98.8 7.2E-11 1.6E-15 111.2 -8.2 139 13-152 143-299 (303)
21 KOG0569 Permease of the major 94.8 7 0.00015 41.9 24.3 118 272-391 265-403 (485)
22 PF04306 DUF456: Protein of un 75.5 59 0.0013 28.9 12.4 120 10-154 7-127 (140)
23 PRK11469 hypothetical protein; 75.4 71 0.0015 29.8 16.3 22 276-297 107-128 (188)
24 PF02659 DUF204: Domain of unk 65.2 56 0.0012 24.8 8.1 39 59-97 6-48 (67)
25 PF11700 ATG22: Vacuole efflux 57.3 2.7E+02 0.0058 29.7 18.0 171 8-192 279-469 (477)
26 PF02673 BacA: Bacitracin resi 57.0 96 0.0021 30.5 10.0 76 330-405 174-258 (259)
27 PRK00281 undecaprenyl pyrophos 55.6 1.9E+02 0.0042 28.5 11.9 79 330-408 178-264 (268)
28 PF02673 BacA: Bacitracin resi 54.1 1E+02 0.0023 30.2 9.7 25 68-92 175-199 (259)
29 COG3859 Predicted membrane pro 53.9 83 0.0018 29.0 8.2 70 357-430 74-143 (185)
30 PRK00281 undecaprenyl pyrophos 49.5 2.5E+02 0.0054 27.8 11.6 24 69-92 180-203 (268)
31 PRK12554 undecaprenyl pyrophos 48.0 2.3E+02 0.005 28.2 11.1 79 331-409 181-268 (276)
32 COG1968 BacA Undecaprenyl pyro 47.1 3E+02 0.0065 27.3 11.9 81 331-411 180-268 (270)
33 PRK12554 undecaprenyl pyrophos 38.8 3.6E+02 0.0078 26.8 10.9 26 68-93 181-206 (276)
34 COG5336 Uncharacterized protei 33.7 1.2E+02 0.0026 26.0 5.5 15 84-98 54-68 (116)
35 PF04306 DUF456: Protein of un 33.1 3.5E+02 0.0075 24.0 13.4 117 277-413 9-126 (140)
36 TIGR02840 spore_YtaF putative 32.5 4.3E+02 0.0093 24.9 16.9 51 46-98 6-56 (206)
37 COG2814 AraJ Arabinose efflux 28.8 4E+02 0.0087 27.9 9.8 61 329-391 71-136 (394)
38 PF04632 FUSC: Fusaric acid re 28.4 8.1E+02 0.017 26.7 14.2 97 83-197 53-152 (650)
39 PRK00733 hppA membrane-bound p 28.1 8.6E+02 0.019 27.4 12.4 83 73-155 233-323 (666)
40 PF06946 Phage_holin_5: Phage 26.0 3.9E+02 0.0084 22.2 8.0 58 100-162 32-89 (93)
41 COG1968 BacA Undecaprenyl pyro 25.5 6.8E+02 0.015 24.9 11.5 25 69-93 181-205 (270)
42 PF07444 Ycf66_N: Ycf66 protei 24.5 1.9E+02 0.0041 23.5 5.1 45 363-408 8-53 (84)
43 TIGR03055 photo_alph_chp2 puta 22.9 3.5E+02 0.0076 26.5 7.4 59 61-119 14-72 (245)
44 PF10011 DUF2254: Predicted me 22.4 8.6E+02 0.019 25.0 11.6 89 102-194 45-150 (371)
45 TIGR02840 spore_YtaF putative 22.0 6.7E+02 0.014 23.6 10.1 49 309-359 6-54 (206)
46 PF06570 DUF1129: Protein of u 21.1 6.8E+02 0.015 23.3 10.2 7 371-377 120-126 (206)
No 1
>PRK04201 zinc transporter ZupT; Provisional
Probab=100.00 E-value=1e-38 Score=312.11 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=206.3
Q ss_pred ChHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhcchhhhhc--------CCChhHHHHHHH
Q 014010 71 SPQNAMLWSIITSLPQPIVAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKE--------ASPTPVASAATI 142 (432)
Q Consensus 71 s~~~a~l~~~l~~l~t~lGalig~~~~~~~~~~l~~llafAaG~mL~va~~eLlPea~~~--------~~~~~~~l~~l~ 142 (432)
+.++++++++++++++++|++++++..+.++++++.+++||+|+|+|+++.|++||+.+. ........++++
T Consensus 3 ~~~~a~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~~~ 82 (265)
T PRK04201 3 NVSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAFFG 82 (265)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHH
Confidence 457889999999999999999999888889999999999999999999999999999974 123344667888
Q ss_pred HHHHHHHHHHHHhhhccccCCCCccchhhhhhhcccchhhHHHHHHHhhhhccchhhccccccccchhcCCCchhhhhhc
Q 014010 143 SVAFMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLS 222 (432)
Q Consensus 143 G~~l~~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (432)
|+++++++|+++++. ++|+++++++
T Consensus 83 G~ll~~~ld~~~~~~-------------------------------------~~~~~~~~~~------------------ 107 (265)
T PRK04201 83 GILGIFLIDRLVPHE-------------------------------------NPHELMQKEE------------------ 107 (265)
T ss_pred HHHHHHHHHHhcccc-------------------------------------Cccccccccc------------------
Confidence 888888888864320 1111100000
Q ss_pred cccCchhHHHHhhhccccccccchhhHHhhcccCCCCcCCCCCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHhhhccc
Q 014010 223 SKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKA 302 (432)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~al~lH~~~EGlaiG~s~~~~ 302 (432)
+++ +.++.++..+.++++.+|+++||+|||+++|+++..+
T Consensus 108 -------------------------~~~---------------~~~~~~~~~~~~~~~~~a~~lH~~~eGlalg~~~~~~ 147 (265)
T PRK04201 108 -------------------------MEF---------------QQPLPKSLKRTGILTALAISIHNFPEGIATFVAALSN 147 (265)
T ss_pred -------------------------ccc---------------cccchHHHHHHHHHHHHHHHHHhcchhhhhhhhhhcc
Confidence 000 0001123356789999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHHH-h--hhhHHHHHHHHHHHhhh-H
Q 014010 303 YGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA-G--IDYSGLDHVMVFACGGL-L 378 (432)
Q Consensus 303 ~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~~-~--~~~~~~~~~la~aaG~~-y 378 (432)
.+.|+.++++|.+||+|||++++.++++++.+|||++.+.+++++++|+|+++|+++ + .++...+++++|++|+| |
T Consensus 148 ~~~g~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~ly 227 (265)
T PRK04201 148 PELGFPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVF 227 (265)
T ss_pred hhhHHHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999875 2 46778899999999999 9
Q ss_pred HhHhhhhhhhhccC-cchHHHHHHHHHHHHHHHHHHHH
Q 014010 379 PSFGRIVKRAASLD-TRKGSCGLIFGVGFATLCLTCTK 415 (432)
Q Consensus 379 i~~~ellPe~~~~~-~~~~~~~~~~G~~l~~~~l~~~~ 415 (432)
|++.|++||+++++ ++.+.+++++|+.+|++.+..++
T Consensus 228 v~~~el~pea~~~~~~~~~~~~~~~G~~~m~~~~~~~~ 265 (265)
T PRK04201 228 ISLDELLPAAKEYGPHHLPSYGLIAGMAVMALSLVLLQ 265 (265)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999998864 46789999999999999887653
No 2
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.3e-32 Score=273.98 Aligned_cols=277 Identities=17% Similarity=0.173 Sum_probs=185.3
Q ss_pred HhHHHHHHHHHHHHh-----hhhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCC-----------hhHHHHHHHHHHH
Q 014010 83 SLPQPIVAVPSFICA-----DAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP-----------TPVASAATISVAF 146 (432)
Q Consensus 83 ~l~t~lGalig~~~~-----~~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~-----------~~~~l~~l~G~~l 146 (432)
.+.+.+|.++-+.+. +.+++++.++.+|++|+|+++++.||+||+.+..+. ......+++|+++
T Consensus 12 ~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~~~Gfl~ 91 (317)
T PF02535_consen 12 FIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIFLVGFLL 91 (317)
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHHHHHHHH
Confidence 344555555555553 346788999999999999999999999999975421 3567788899999
Q ss_pred HHHHHHHHhhhccccCCCCccchhhhhhhcccchhhHHHHHHHhhhhccchhhccccccccchhcCCCchhhhhhccccC
Q 014010 147 MEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLSSKMG 226 (432)
Q Consensus 147 ~~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (432)
++++|+++....++.. .+.|.+.+++++.+..+....+++. .
T Consensus 92 ~~~ie~i~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~------~- 133 (317)
T PF02535_consen 92 FFFIERILHSIFEHDH-------------------------------SHSHDHSHSHSSSELNSDEPSNSVS------S- 133 (317)
T ss_pred HHHHHHHHHHHhhccc-------------------------------cccccccccccccccccccccCccc------c-
Confidence 9999998865422100 0111111111100000000000000 0
Q ss_pred chhHHHHhhhccccccccchhhHHhhcccCCCCcCCCCCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHhhhccchhhH
Q 014010 227 FIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLG 306 (432)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~al~lH~~~EGlaiG~s~~~~~~~g 306 (432)
++..+....+..++..+.+.+.+.+...+.++..+..+.++++.+|+++||++||+++|+++..+. +
T Consensus 134 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~--~ 200 (317)
T PF02535_consen 134 -----------SEIEDDSNSEHSDQNSHHSHSSHSHSHHDDKSGVSQNIRALILLIALSIHSFFEGLAIGAAFSSDS--G 200 (317)
T ss_pred -----------ccccCCcccccccccccccccccccccccccchhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhh--H
Confidence 000000000000000000000000000111111111245899999999999999999999776555 8
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHHH------hhhhHHHHHHHHHHHhhh-HH
Q 014010 307 QHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA------GIDYSGLDHVMVFACGGL-LP 379 (432)
Q Consensus 307 ~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~~------~~~~~~~~~~la~aaG~~-yi 379 (432)
+.++++|.+||+||+++++.++++++.++++++.+.+++++++|+|+++|+.+ ...+...++++++++|+| ||
T Consensus 201 ~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv 280 (317)
T PF02535_consen 201 WSLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYV 280 (317)
T ss_pred HHHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 356677889999999999 99
Q ss_pred hHhhhhhhhhccCc-----chHHHHHHHHHHHHHHH
Q 014010 380 SFGRIVKRAASLDT-----RKGSCGLIFGVGFATLC 410 (432)
Q Consensus 380 ~~~ellPe~~~~~~-----~~~~~~~~~G~~l~~~~ 410 (432)
++.|++||+.++++ ..+.+++++|+.+|+++
T Consensus 281 ~~~ell~~~~~~~~~~~~~~~~~~~~~~G~~~~~~l 316 (317)
T PF02535_consen 281 AFVELLPEEFHNKHSRKSRLLKFLGFLIGFLLMALL 316 (317)
T ss_pred HHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887643 66788999999999874
No 3
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-32 Score=267.51 Aligned_cols=246 Identities=24% Similarity=0.313 Sum_probs=198.3
Q ss_pred CChHHHHHHHHHHHhHHHHHHHHHHHH-hhhhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCC--------hhHHHHH
Q 014010 70 VSPQNAMLWSIITSLPQPIVAVPSFIC-ADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP--------TPVASAA 140 (432)
Q Consensus 70 ~s~~~a~l~~~l~~l~t~lGalig~~~-~~~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~--------~~~~l~~ 140 (432)
.+....+..++++++.+.+|+++.++. .+.++++....++|++|+|++.++++++|+..+.... .....+
T Consensus 5 ~~~l~~~~~~ll~~~~t~lG~~~~~~~~~~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~g- 83 (266)
T COG0428 5 NSLLFALLLGLLAGLATALGALLVVLAVRKVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLPALAG- 83 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHhhcccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccccchhhHHHHHH-
Confidence 345567888999999999999999983 5778899999999999999999999999988865432 122333
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCccchhhhhhhcccchhhHHHHHHHhhhhccchhhccccccccchhcCCCchhhhh
Q 014010 141 TISVAFMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLL 220 (432)
Q Consensus 141 l~G~~l~~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 220 (432)
|+.|+.+++.+|++.. |+|..+..+
T Consensus 84 ---------------------------------------~~~G~~~~~~~d~l~~-h~h~~~~~~--------------- 108 (266)
T COG0428 84 ---------------------------------------FLLGVLFIFLLDRLVP-HEHEGKSVE--------------- 108 (266)
T ss_pred ---------------------------------------HHHHHHHHHHHHHcCC-ccCCCCCcc---------------
Confidence 4455555555555443 433111000
Q ss_pred hccccCchhHHHHhhhccccccccchhhHHhhcccCCCCcCCCCCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHhhhc
Q 014010 221 LSSKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAP 300 (432)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~al~lH~~~EGlaiG~s~~ 300 (432)
..+ +.+++..+.++++++++++||||||+++|+++.
T Consensus 109 ---------------------------~~~-----------------~~~~~~~~~~~l~~lai~iHnfpEGlai~va~~ 144 (266)
T COG0428 109 ---------------------------GLE-----------------GLRKPNLRRGFLLALAISLHNFPEGLAIGVAFL 144 (266)
T ss_pred ---------------------------ccc-----------------cccCcchhHHHHHHHHHHHhccchhHHHHHHHh
Confidence 000 000112456899999999999999999999999
Q ss_pred cchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHHH-hhhh-HHHHHHHHHHHhhh-
Q 014010 301 KAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA-GIDY-SGLDHVMVFACGGL- 377 (432)
Q Consensus 301 ~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~~-~~~~-~~~~~~la~aaG~~- 377 (432)
.++..|+.+++||.+||+|||++++.|++.+++||+|++.++.++++.+|+|+++|+.. +... ..+++.+++++|+|
T Consensus 145 ~~~~~gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~lgavig~~~~~~~~~~~l~~~la~aaG~mv 224 (266)
T COG0428 145 SNPSLGIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPLGAVIGAYLLGISSPLVLPFALAFAAGAMV 224 (266)
T ss_pred ccchHHHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHHHHHHHHHHHhhchHHHHHHHHHHHhhcch
Confidence 99999999999999999999999999999999999999999999999999999999754 4444 88999999999999
Q ss_pred HHhHhhhhhhhhccC---cchHHHHHHHHHHHHHHHHHHHH
Q 014010 378 LPSFGRIVKRAASLD---TRKGSCGLIFGVGFATLCLTCTK 415 (432)
Q Consensus 378 yi~~~ellPe~~~~~---~~~~~~~~~~G~~l~~~~l~~~~ 415 (432)
|+++.|++||+++++ ++..+.++++|+++|+++...+.
T Consensus 225 ~v~~~eliPea~~~~~~~~~~~~~~~~~G~~~~~~l~~~l~ 265 (266)
T COG0428 225 YVVVDELLPEAKRHGGGSEKLATAGLFAGFLVMAVLDVLLG 265 (266)
T ss_pred hhhHHHHhhHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999852 36789999999999999987653
No 4
>PLN02159 Fe(2+) transport protein
Probab=99.94 E-value=1e-24 Score=219.17 Aligned_cols=135 Identities=15% Similarity=0.182 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHH
Q 014010 275 LQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAI 354 (432)
Q Consensus 275 ~~~~~l~~al~lH~~~EGlaiG~s~~~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~ 354 (432)
..++++.+|+++||++||+++|+++..+...+ +.+||.+||+|||++++.++.+++.++++.+.+.+++++++|+|++
T Consensus 183 ~~a~~l~~gl~lHS~~eGlalG~~~~~~~~~~--l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~~ 260 (337)
T PLN02159 183 VIAMVLELGIIVHSVVIGLSLGATNDTCTIKG--LIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGIF 260 (337)
T ss_pred HHHHHHHHHHHHHHHHhchhhhcCCCchhHHH--HHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHHH
Confidence 34689999999999999999999765555544 5669999999999999999999999999999999999999999999
Q ss_pred HHHHH-hh----hh---HHHHHHHHHHHhhh-HHhHhhhhhhhhccC--------cchHHHHHHHHHHHHHHHH
Q 014010 355 GAILA-GI----DY---SGLDHVMVFACGGL-LPSFGRIVKRAASLD--------TRKGSCGLIFGVGFATLCL 411 (432)
Q Consensus 355 lg~~~-~~----~~---~~~~~~la~aaG~~-yi~~~ellPe~~~~~--------~~~~~~~~~~G~~l~~~~l 411 (432)
+|+.. +. ++ .+.++++++++|+| ||++.|++|++...+ +.++.+++++|+.+|+++.
T Consensus 261 iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Mall~ 334 (337)
T PLN02159 261 LGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMSIVA 334 (337)
T ss_pred HHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99765 21 11 35689999999999 999999999764322 1245567899999998764
No 5
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=99.93 E-value=1.9e-24 Score=217.13 Aligned_cols=136 Identities=13% Similarity=0.140 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHH
Q 014010 275 LQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAI 354 (432)
Q Consensus 275 ~~~~~l~~al~lH~~~EGlaiG~s~~~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~ 354 (432)
...+++.+|+++||++||+++|++. +....+.+++||.+||+|||++++.++.+++.++++.+.+.+++++++|+|++
T Consensus 170 ~~~~~l~~gl~~Hs~~eGlalG~~~--~~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~ 247 (324)
T TIGR00820 170 VVAQVLELGIIVHSVVIGLSLGASQ--SPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIA 247 (324)
T ss_pred HHHHHHHHHHHhcchhhhhhhhhcc--CcchHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHH
Confidence 3578899999999999999999965 33446788999999999999999999999999999999999999999999999
Q ss_pred HHHHH-h----hhh---HHHHHHHHHHHhhh-HHhHhhhhhhhhccC--------cchHHHHHHHHHHHHHHHHH
Q 014010 355 GAILA-G----IDY---SGLDHVMVFACGGL-LPSFGRIVKRAASLD--------TRKGSCGLIFGVGFATLCLT 412 (432)
Q Consensus 355 lg~~~-~----~~~---~~~~~~la~aaG~~-yi~~~ellPe~~~~~--------~~~~~~~~~~G~~l~~~~l~ 412 (432)
+|+.+ + .++ .+.++++++++|+| ||++.|++|++..++ +.++.+++++|+.+|++...
T Consensus 248 iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma~l~~ 322 (324)
T TIGR00820 248 IGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMSLLAK 322 (324)
T ss_pred HHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99765 2 122 35689999999999 999999999754332 13567788999999987653
No 6
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.1e-23 Score=210.05 Aligned_cols=276 Identities=17% Similarity=0.149 Sum_probs=181.3
Q ss_pred hHHHHHHHHHHHHhh-----hhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHHHHHHHHHHHHHhhhc
Q 014010 84 LPQPIVAVPSFICAD-----AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALSTLFQNLS 158 (432)
Q Consensus 84 l~t~lGalig~~~~~-----~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G~~l~~ll~~~l~~~~ 158 (432)
+.+.+|..+-++..+ ..++...+..+|++|++|+..+.|++||+.|..+...
T Consensus 28 ~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~----------------------- 84 (327)
T KOG1558|consen 28 LLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLC----------------------- 84 (327)
T ss_pred HHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhccc-----------------------
Confidence 456667776666653 3456788899999999999999999999998643210
Q ss_pred cccCCCCccchhhhhhhcccchh--hHHHHHHHhhhhccchhhccccccccchhcCCCchhhhhhccccCchhHHHHhhh
Q 014010 159 HDYNSQDASGYFVSLLFGLGPLL--GGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLSSKMGFIPLVFLLAA 236 (432)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (432)
. .......|+.+.|+ .|+++++++|.+.+.+..+.+...+.+. ..+. +++.+.- ..
T Consensus 85 ---~-----~~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~-----~~~~---~~~~~~~------~~ 142 (327)
T KOG1558|consen 85 ---L-----ADNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNE-----VAVS---EEGEDLR------AV 142 (327)
T ss_pred ---c-----cCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccc-----cCCc---CcCcccc------cc
Confidence 0 01123345555555 6777888888777544321111000000 0000 0000000 00
Q ss_pred ccccccccchhhHHhhcccCCCCcCCCCCCCCCcchhhHHHHHHHHHHHHhhhhhHHHHHhhhccchhhHHHHHHHHHHh
Q 014010 237 GAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLH 316 (432)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~al~lH~~~EGlaiG~s~~~~~~~g~~l~iaI~lH 316 (432)
+...+..+ +++|...+...+ ++....+.......++.+.+|+++|+++||+++|+ +.+...-+.+..|+.+|
T Consensus 143 ~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~iL~lgi~~HSvfeGlalGv--~~~~~ti~~L~~al~fH 214 (327)
T KOG1558|consen 143 GNGEHGAI--HVGHSHGHSEPS----TPGVVDDGQASRLRSLILELGLSFHSVFEGLALGV--QDSVSTIWTLFLALSFH 214 (327)
T ss_pred cccCCccc--cCCCCCCCCCCC----CccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc--cCCHHHHHHHHHHHHHH
Confidence 00000000 001110000000 00001111124566788999999999999999999 55666779999999999
Q ss_pred hhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHHHhh-------hhHHHHHHHHHHHhhh-HHhHhhhhhhh
Q 014010 317 GLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILAGI-------DYSGLDHVMVFACGGL-LPSFGRIVKRA 388 (432)
Q Consensus 317 ~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~~~~-------~~~~~~~~la~aaG~~-yi~~~ellPe~ 388 (432)
|..|||+++..+.+++.++++++.+.+.+++++|+|..+|..... ..-..+++.++++|++ |+++.|++|.+
T Consensus 215 k~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~e 294 (327)
T KOG1558|consen 215 KLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAE 294 (327)
T ss_pred HHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHH
Confidence 999999999999999999999999999999999999999986522 2235678999999999 99999999987
Q ss_pred hccCc-------chHHHHHHHHHHHHHHHHH
Q 014010 389 ASLDT-------RKGSCGLIFGVGFATLCLT 412 (432)
Q Consensus 389 ~~~~~-------~~~~~~~~~G~~l~~~~l~ 412 (432)
+.+++ ..++++.++|+.+|.+...
T Consensus 295 f~~~~~~~~~~~i~~~i~~~~G~alms~l~~ 325 (327)
T KOG1558|consen 295 FANPKMQSLKLQILKLIALLLGFALMSLLAI 325 (327)
T ss_pred hcCchhhhHHHHHHHHHHHHHhHHHHHHHHH
Confidence 76643 5678999999999987653
No 7
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=2.1e-24 Score=210.93 Aligned_cols=144 Identities=35% Similarity=0.563 Sum_probs=135.3
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHH
Q 014010 9 AAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPI 88 (432)
Q Consensus 9 ~~~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~l 88 (432)
+|+++++++++++||||||+++|+++..++.. |+.+++||.+||+|||++++.+++.++.+|+|++.++.++++..++
T Consensus 118 ~~~~~l~~lai~iHnfpEGlai~va~~~~~~~--gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~l 195 (266)
T COG0428 118 LRRGFLLALAISLHNFPEGLAIGVAFLSNPSL--GIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPL 195 (266)
T ss_pred hhHHHHHHHHHHHhccchhHHHHHHHhccchH--HHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHH
Confidence 56899999999999999999999999988865 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhh-hhhhHHHHHHHHHHHHHHHHhcchhhhhc--CCChhHHHHHHHHHHHHHHHHHHH
Q 014010 89 VAVPSFICADAFN-KFLPFCTGFAAGCMIWMVIAEVLPDAFKE--ASPTPVASAATISVAFMEALSTLF 154 (432)
Q Consensus 89 Galig~~~~~~~~-~~l~~llafAaG~mL~va~~eLlPea~~~--~~~~~~~l~~l~G~~l~~ll~~~l 154 (432)
|+++|++....+. .++++++++++|.|+|+++.|++||++++ .+.+..+.++.+|+++|++++..+
T Consensus 196 gavig~~~~~~~~~~~l~~~la~aaG~mv~v~~~eliPea~~~~~~~~~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 196 GAVIGAYLLGISSPLVLPFALAFAAGAMVYVVVDELLPEAKRHGGGSEKLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHhhcchhhhHHHHhhHHHhcCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999877666 89999999999999999999999999994 466778999999999999999864
No 8
>PRK04201 zinc transporter ZupT; Provisional
Probab=99.92 E-value=4.4e-24 Score=208.95 Aligned_cols=142 Identities=26% Similarity=0.361 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHHH
Q 014010 10 AKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIV 89 (432)
Q Consensus 10 ~~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~lG 89 (432)
++++++.+++++||+|||+++|+++..+... |+.++++|++||+|||++++.++++++.++++++++.+++++++|+|
T Consensus 120 ~~~~~~~~a~~lH~~~eGlalg~~~~~~~~~--g~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G 197 (265)
T PRK04201 120 RTGILTALAISIHNFPEGIATFVAALSNPEL--GFPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLG 197 (265)
T ss_pred HHHHHHHHHHHHHhcchhhhhhhhhhcchhh--HHHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence 6678999999999999999999999888765 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh--hhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHHHHHHHHHHHH
Q 014010 90 AVPSFICAD--AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALSTL 153 (432)
Q Consensus 90 alig~~~~~--~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G~~l~~ll~~~ 153 (432)
+++|+++.+ .++.+.+++++|++|+|+|+++.|++||+.+.++++....++++|+.+|.+++..
T Consensus 198 ~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~~~~~~~~~~~G~~~m~~~~~~ 263 (265)
T PRK04201 198 AVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLDELLPAAKEYGPHHLPSYGLIAGMAVMALSLVL 263 (265)
T ss_pred HHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHH
Confidence 999998764 3667889999999999999999999999999877778899999999999998765
No 9
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=2.5e-22 Score=189.12 Aligned_cols=267 Identities=15% Similarity=0.138 Sum_probs=191.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHhh----------hhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCC--------
Q 014010 72 PQNAMLWSIITSLPQPIVAVPSFICAD----------AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP-------- 133 (432)
Q Consensus 72 ~~~a~l~~~l~~l~t~lGalig~~~~~----------~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~-------- 133 (432)
|...|+++++.+....+.++.-.++.+ ..++.+..+++||.|.++..++.|++||+.+..+.
T Consensus 64 k~d~Wi~sLlGs~~vglsGifPl~~iP~e~~~~l~s~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl 143 (361)
T KOG2694|consen 64 KEDMWIYSLLGSSLVGLSGIFPLFLIPAEIHVLLSSSAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQDPSSENSL 143 (361)
T ss_pred ccchhHHHHhhhHHHhhcccceeeeechhhhhhccCchhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCCCCCCCch
Confidence 334578888877776666554443321 24567899999999999999999999999976421
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccCCCCccchhhhhhhcccchhhHHHHHHHhhhhccchhhccccccccchhcCC
Q 014010 134 TPVASAATISVAFMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGG 213 (432)
Q Consensus 134 ~~~~l~~l~G~~l~~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 213 (432)
....++++.|++.+.++++++..-++ |+.+ +.|..|
T Consensus 144 ~siGLwVlaGiLtF~~ieK~f~ss~E----E~~~--------------------------q~p~~~-------------- 179 (361)
T KOG2694|consen 144 SSIGLWVLAGILTFSLIEKLFASSEE----EQHK--------------------------QSPSAH-------------- 179 (361)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcchh----hccc--------------------------cCCCcc--------------
Confidence 12478899999999999988743110 1100 001000
Q ss_pred CchhhhhhccccCchhHHHHhhhccccccccchhhHHhhcccCCCCcCCCCCCCCCcchhhHHHHHHHHHHHHhhhhhHH
Q 014010 214 WRPVQLLLSSKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGL 293 (432)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~al~lH~~~EGl 293 (432)
+ ++ .+.+... ..+--+++.+..| +..++..+..||+..++-+++||..|+
T Consensus 180 --~-------------~~--ac~~~~g--~~c~~r~~~q~~~-----------~~~~q~~kvagYLNLlAN~iDNFtHGL 229 (361)
T KOG2694|consen 180 --F-------------LN--ACGGACG--KVCFLREQEQKSK-----------ERKEQPKKVAGYLNLLANIIDNFTHGL 229 (361)
T ss_pred --h-------------hh--Hhhhccc--cceecchhhcccc-----------cccccchhHHHHHHHHHHhhhhhhhhh
Confidence 0 00 0000000 0000000000000 111233456789999999999999999
Q ss_pred HHHhhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHHH--h---hhhHHHHH
Q 014010 294 ALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA--G---IDYSGLDH 368 (432)
Q Consensus 294 aiG~s~~~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~~--~---~~~~~~~~ 368 (432)
+++.||..+.+.|+.++++|.+|+||+++++++.+.++|++||.+....+.++....+|+.+++-. + ..+.-.+|
T Consensus 230 AVa~SFLVS~k~GiltT~aILLHEIPHEvgDFAILLRagF~rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E~~tsw 309 (361)
T KOG2694|consen 230 AVASSFLVSTKFGILTTIAILLHEIPHEVGDFAILLRAGFGRWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIETRTSW 309 (361)
T ss_pred HHhhhhhhhhhhhHHHHHHHHHhhccchhhhhHHHHHhccchhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhhhhcce
Confidence 999999999999999999999999999999999999999999999999999999999999888632 3 33455779
Q ss_pred HHHHHHhhh-HHhHhhhhhhhhccCc----chHHHHHHHHHHHHHHHHH
Q 014010 369 VMVFACGGL-LPSFGRIVKRAASLDT----RKGSCGLIFGVGFATLCLT 412 (432)
Q Consensus 369 ~la~aaG~~-yi~~~ellPe~~~~~~----~~~~~~~~~G~~l~~~~l~ 412 (432)
++.|++|+| ||+..+++|+..++.. ..+++.++.|+++|.+.-.
T Consensus 310 ~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~lv~Gi~~M~~~sl 358 (361)
T KOG2694|consen 310 LLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLMLVTGILTMSFLSL 358 (361)
T ss_pred eeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999999998665532 5689999999999987643
No 10
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=99.88 E-value=5.3e-22 Score=197.59 Aligned_cols=137 Identities=27% Similarity=0.469 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHHH
Q 014010 10 AKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIV 89 (432)
Q Consensus 10 ~~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~lG 89 (432)
++++++.+++++||++||+++|+++..+. ++.++++|++||+||+++++.++++++.++++++++.+++++++|+|
T Consensus 171 ~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~----~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~piG 246 (317)
T PF02535_consen 171 IRALILLIALSIHSFFEGLAIGAAFSSDS----GWSLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLSTPIG 246 (317)
T ss_pred HHHHHHHHHHHhhcchhhhhhhcchhhhh----HHHHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHHHHH
Confidence 45899999999999999999999886543 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-----hhhhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCC----ChhHHHHHHHHHHHHHHH
Q 014010 90 AVPSFIC-----ADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEAS----PTPVASAATISVAFMEAL 150 (432)
Q Consensus 90 alig~~~-----~~~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~----~~~~~l~~l~G~~l~~ll 150 (432)
+++|+++ ...++...++++++++|+|+|+++.|++||..++.+ .....+++++|+.+|.++
T Consensus 247 ~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~~~~~~~~~~~~~~G~~~~~~l 316 (317)
T PF02535_consen 247 ALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHSRKSRLLKFLGFLIGFLLMALL 316 (317)
T ss_pred HHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 446777899999999999999999999999998876 356688999999999876
No 11
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=1.2e-22 Score=209.84 Aligned_cols=141 Identities=16% Similarity=0.208 Sum_probs=125.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhh
Q 014010 270 VSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMG 349 (432)
Q Consensus 270 ~~~~~~~~~~l~~al~lH~~~EGlaiG~s~~~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~ 349 (432)
+......+|++.+|+++|||.||+|||++|..+...|+.+++|+.+||+|+++++++.|+++|.++++++++++++++++
T Consensus 297 ~~~l~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnllsal~a 376 (453)
T KOG2693|consen 297 VEELKKVAYMILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLLSALTA 376 (453)
T ss_pred ccchhhHhHHHHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHHhHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh--hhHHHHHHHHHHHhhh-HHhHhhhhhhhhccCc---------chHHHHHHHHHHHHHHH
Q 014010 350 PTSAIGAILAGI--DYSGLDHVMVFACGGL-LPSFGRIVKRAASLDT---------RKGSCGLIFGVGFATLC 410 (432)
Q Consensus 350 plGa~lg~~~~~--~~~~~~~~la~aaG~~-yi~~~ellPe~~~~~~---------~~~~~~~~~G~~l~~~~ 410 (432)
.+|..+|..++. .+....|++++++|.| ||+..+++||..+.++ ..+..+++.||.+|++.
T Consensus 377 ~~G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~i 449 (453)
T KOG2693|consen 377 FAGLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLI 449 (453)
T ss_pred HhhhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhh
Confidence 999999987744 4788889999999999 9999999998765532 23566777777777654
No 12
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=99.79 E-value=1.6e-18 Score=174.33 Aligned_cols=138 Identities=14% Similarity=0.158 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHHHHH
Q 014010 12 VVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAV 91 (432)
Q Consensus 12 ~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~lGal 91 (432)
.+++.+|+++||++||+++|++...+ . .+.+++||++||+|||++++.++.+++.++++.+++.+++++++|+|++
T Consensus 172 ~~~l~~gl~~Hs~~eGlalG~~~~~~--~--~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~ 247 (324)
T TIGR00820 172 AQVLELGIIVHSVVIGLSLGASQSPD--T--IKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIA 247 (324)
T ss_pred HHHHHHHHHhcchhhhhhhhhccCcc--h--HHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHH
Confidence 78889999999999999999986322 2 6789999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh----hh---hhhhHHHHHHHHHHHHHHHHhcchhhhhcCC-------ChhHHHHHHHHHHHHHHHHHH
Q 014010 92 PSFICADA----FN---KFLPFCTGFAAGCMIWMVIAEVLPDAFKEAS-------PTPVASAATISVAFMEALSTL 153 (432)
Q Consensus 92 ig~~~~~~----~~---~~l~~llafAaG~mL~va~~eLlPea~~~~~-------~~~~~l~~l~G~~l~~ll~~~ 153 (432)
+|+.+.+. ++ ...+++.++++|+|+|+++.|++|+.....+ ..+..+++++|+.+|.++..+
T Consensus 248 iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma~l~~w 323 (324)
T TIGR00820 248 IGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMSLLAKW 323 (324)
T ss_pred HHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99987642 22 2578999999999999999999998764331 123567899999999998764
No 13
>PLN02159 Fe(2+) transport protein
Probab=99.78 E-value=2.5e-18 Score=173.11 Aligned_cols=139 Identities=14% Similarity=0.178 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHHHH
Q 014010 11 KVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVA 90 (432)
Q Consensus 11 ~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~lGa 90 (432)
..+++.+|+++||++||+++|+++..+. -..+.++|.+||+|||++++..+.+++.++++.+++.+++++++|+|.
T Consensus 184 ~a~~l~~gl~lHS~~eGlalG~~~~~~~----~~~l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~ 259 (337)
T PLN02159 184 IAMVLELGIIVHSVVIGLSLGATNDTCT----IKGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGI 259 (337)
T ss_pred HHHHHHHHHHHHHHHhchhhhcCCCchh----HHHHHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHH
Confidence 3588999999999999999999864433 233677999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhh-------hhhhHHHHHHHHHHHHHHHHhcchhhhhcCC-------ChhHHHHHHHHHHHHHHHHHH
Q 014010 91 VPSFICADAFN-------KFLPFCTGFAAGCMIWMVIAEVLPDAFKEAS-------PTPVASAATISVAFMEALSTL 153 (432)
Q Consensus 91 lig~~~~~~~~-------~~l~~llafAaG~mL~va~~eLlPea~~~~~-------~~~~~l~~l~G~~l~~ll~~~ 153 (432)
.+|+.+.+..+ ...+++.++++|+|+|+++.|++|+.....+ ..+..+++++|+.+|.++..+
T Consensus 260 ~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Mall~~w 336 (337)
T PLN02159 260 FLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMSIVAKW 336 (337)
T ss_pred HHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99998755311 3578999999999999999999998754321 123456899999999998764
No 14
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.71 E-value=5.9e-18 Score=175.16 Aligned_cols=142 Identities=18% Similarity=0.345 Sum_probs=129.2
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHH
Q 014010 9 AAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPI 88 (432)
Q Consensus 9 ~~~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~l 88 (432)
..++|+++++.++|||.||+|||++|..+... |++.++|+..||+|+++++.+.|+++|.+.++++++++++++...+
T Consensus 301 ~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~--G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnllsal~a~~ 378 (453)
T KOG2693|consen 301 KKVAYMILAGDGLHNFTDGLAIGAAFTSSLLH--GISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLLSALTAFA 378 (453)
T ss_pred hhHhHHHHhccccccchhhhhhccccccccch--hHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHHhHHHHHh
Confidence 46899999999999999999999999988866 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-hhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCCh--------hHHHHHHHHHHHHHHHHH
Q 014010 89 VAVPSFICADA-FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT--------PVASAATISVAFMEALST 152 (432)
Q Consensus 89 Galig~~~~~~-~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~--------~~~l~~l~G~~l~~ll~~ 152 (432)
|..+|.++... .+....+++++++|.++|++..+++||..+..+.. ....+++.|+.+|+++..
T Consensus 379 G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~ia~ 451 (453)
T KOG2693|consen 379 GLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLIAL 451 (453)
T ss_pred hhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhhhc
Confidence 99999988765 56778899999999999999999999999876532 236688999999998865
No 15
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=99.69 E-value=2.9e-16 Score=156.96 Aligned_cols=141 Identities=22% Similarity=0.256 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHH
Q 014010 9 AAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPI 88 (432)
Q Consensus 9 ~~~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~l 88 (432)
..+.+.+.+|+++||++||+++|++...+ .-+.++.++.+||.-||++++..+..++.++++++.+.+.+++.||+
T Consensus 174 ~~~~~iL~lgi~~HSvfeGlalGv~~~~~----ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPi 249 (327)
T KOG1558|consen 174 RLRSLILELGLSFHSVFEGLALGVQDSVS----TIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPI 249 (327)
T ss_pred hHHHHHHHHHHHHHHHHHhhhccccCCHH----HHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHH
Confidence 56788999999999999999999874322 37889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh------hhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCC------ChhHHHHHHHHHHHHHHHHHH
Q 014010 89 VAVPSFICADA------FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEAS------PTPVASAATISVAFMEALSTL 153 (432)
Q Consensus 89 Galig~~~~~~------~~~~l~~llafAaG~mL~va~~eLlPea~~~~~------~~~~~l~~l~G~~l~~ll~~~ 153 (432)
|..+|..+... .....+++.++|+|+++|+++.|++|+.+.+.+ +...+++.++|+.+|.++..+
T Consensus 250 Gi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i~~~~G~alms~l~~w 326 (327)
T KOG1558|consen 250 GIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLIALLLGFALMSLLAIW 326 (327)
T ss_pred HHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999988653 223688999999999999999999999887543 135688999999999998764
No 16
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.55 E-value=1.5e-14 Score=136.91 Aligned_cols=147 Identities=27% Similarity=0.307 Sum_probs=128.5
Q ss_pred cchhHHHHHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhH
Q 014010 6 GADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLP 85 (432)
Q Consensus 6 ~~~~~~~~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~ 85 (432)
-+++..+|+.+++-+++||..|++++.+|..+.+. |++.+++|++|+||++.++++.+.++|..||.+...-+.++..
T Consensus 207 q~~kvagYLNLlAN~iDNFtHGLAVa~SFLVS~k~--GiltT~aILLHEIPHEvgDFAILLRagF~rw~Aa~aQL~TA~~ 284 (361)
T KOG2694|consen 207 QPKKVAGYLNLLANIIDNFTHGLAVASSFLVSTKF--GILTTIAILLHEIPHEVGDFAILLRAGFGRWNAALAQLTTAAF 284 (361)
T ss_pred cchhHHHHHHHHHHhhhhhhhhhHHhhhhhhhhhh--hHHHHHHHHHhhccchhhhhHHHHHhccchhHHHHHHHHHHHH
Confidence 34456799999999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh----hhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCCh---hHHHHHHHHHHHHHHHHHHH
Q 014010 86 QPIVAVPSFICAD----AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPT---PVASAATISVAFMEALSTLF 154 (432)
Q Consensus 86 t~lGalig~~~~~----~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~---~~~l~~l~G~~l~~ll~~~l 154 (432)
..+|+++++--.. ..+....+++.|.+|-++|++.++++|+..++.+++ ...+.++.|+++|.++...+
T Consensus 285 GlLGalvAi~g~~g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~lv~Gi~~M~~~sl~f 360 (361)
T KOG2694|consen 285 GLLGALVAIHGHTGNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLMLVTGILTMSFLSLSF 360 (361)
T ss_pred HHhhhHHHhhcCcCCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988874321 234456789999999999999999999999877655 45789999999999986643
No 17
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=99.54 E-value=2.1e-15 Score=150.32 Aligned_cols=131 Identities=22% Similarity=0.256 Sum_probs=94.8
Q ss_pred HHHHHHHhhhhhHH-HHHhhhccc----h-----hhHHHHHHHHH---HhhhHHHHHHHHHHHhcCCChHHHHHHHHHH-
Q 014010 280 SCGAVALHALAEGL-ALGVAAPKA----Y-----GLGQHMVLPVS---LHGLPRGAAVASCIYGATASLPASLAAAALI- 345 (432)
Q Consensus 280 l~~al~lH~~~EGl-aiG~s~~~~----~-----~~g~~l~iaI~---lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~- 345 (432)
....+..||.|||+ +|++++..- + ...-..+++|. +||+|||++++.+++.++.||||++++..+.
T Consensus 249 ~~~~~~~h~~P~g~~~I~va~~~alst~pE~Fe~~~ns~~a~Gf~v~li~nf~Eglavslpl~~a~~Sr~~afl~~a~~g 328 (406)
T KOG2474|consen 249 LTLSITVHNHPEGLIGIQVALGAALSTFPEGFESFYNSSLAIGFGVFLIHNFVEGLAVSLPLAGAGFSRLKAFLYGAVLG 328 (406)
T ss_pred hcchhhcccCcchhhHHHHHHHhhhhcCcHHHHHHhccccccchhHHHHhcccccceeeeehhhhhhHHHHHHHHHHHhh
Confidence 34567778888887 676655310 0 00001344554 9999999999999999999999999886554
Q ss_pred HhhhHHHHHHHHHH--hhhhHHHHHHHHHHHhhh-HHhHhhhhhhhhccCc-chHHHHHHHH---HHHHHHH
Q 014010 346 GFMGPTSAIGAILA--GIDYSGLDHVMVFACGGL-LPSFGRIVKRAASLDT-RKGSCGLIFG---VGFATLC 410 (432)
Q Consensus 346 al~~plGa~lg~~~--~~~~~~~~~~la~aaG~~-yi~~~ellPe~~~~~~-~~~~~~~~~G---~~l~~~~ 410 (432)
++..|+|.++++.. .......++++++++|++ |+...+++||+.++++ +....+.++| ++++..+
T Consensus 329 ~~s~~lGll~a~~v~la~~igl~~~~~a~aaG~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~v~l~l 400 (406)
T KOG2474|consen 329 GVSPPLGLLIAFAVFLAEPIGLLPYALAFAAGAMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFLVTLIL 400 (406)
T ss_pred cchhhHHHHHHHHHHhcCccchhhHHHHHhccceEEEEeccccccccccccccccccccchhhhhHHHHHHH
Confidence 57778999999865 333335899999999999 9999999999988754 5555555555 5544443
No 18
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=99.00 E-value=1e-10 Score=117.23 Aligned_cols=142 Identities=27% Similarity=0.436 Sum_probs=105.6
Q ss_pred hHHHHHHHHHHHHhhhHHHH-HHHHHhhc-------------CCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHH
Q 014010 9 AAKVVLVIGIMTLHSFGEGS-GVGVSFAG-------------SKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQN 74 (432)
Q Consensus 9 ~~~~~~~~ial~lHs~~eGl-aiG~~~~~-------------~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~ 74 (432)
|++--.....+..||.|||+ +|++++.. +...+.|+.+++ +||+|||+++..++..++.+||+
T Consensus 243 w~~i~l~~~~~~~h~~P~g~~~I~va~~~alst~pE~Fe~~~ns~~a~Gf~v~l---i~nf~Eglavslpl~~a~~Sr~~ 319 (406)
T KOG2474|consen 243 WRRIHLLTLSITVHNHPEGLIGIQVALGAALSTFPEGFESFYNSSLAIGFGVFL---IHNFVEGLAVSLPLAGAGFSRLK 319 (406)
T ss_pred hHHHhhhcchhhcccCcchhhHHHHHHHhhhhcCcHHHHHHhccccccchhHHH---HhcccccceeeeehhhhhhHHHH
Confidence 56666667777788888886 66555432 101112333333 99999999999999999999999
Q ss_pred HHHHHHHH-HhHHHHHHHHHHHHhhh-hhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHH---HHHHHH
Q 014010 75 AMLWSIIT-SLPQPIVAVPSFICADA-FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATIS---VAFMEA 149 (432)
Q Consensus 75 a~l~~~l~-~l~t~lGalig~~~~~~-~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G---~~l~~l 149 (432)
++++.... +..-|+|.++++.+... ....+++++++++|.|+|+...+++||+..+++.+..-.+.++| +++++.
T Consensus 320 afl~~a~~g~~s~~lGll~a~~v~la~~igl~~~~~a~aaG~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~v~l~ 399 (406)
T KOG2474|consen 320 AFLYGAVLGGVSPPLGLLIAFAVFLAEPIGLLPYALAFAAGAMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFLVTLI 399 (406)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHhcCccchhhHHHHHhccceEEEEeccccccccccccccccccccchhhhhHHHHHH
Confidence 99997555 56888899888876432 22359999999999999999999999999887665555555555 888887
Q ss_pred HHHH
Q 014010 150 LSTL 153 (432)
Q Consensus 150 l~~~ 153 (432)
++..
T Consensus 400 l~~~ 403 (406)
T KOG2474|consen 400 LDVA 403 (406)
T ss_pred HHHh
Confidence 7764
No 19
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.93 E-value=2.7e-11 Score=113.94 Aligned_cols=130 Identities=19% Similarity=0.230 Sum_probs=104.4
Q ss_pred HHHHHHHhhhhhHHHHHhhhcc-chhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHH
Q 014010 280 SCGAVALHALAEGLALGVAAPK-AYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAIL 358 (432)
Q Consensus 280 l~~al~lH~~~EGlaiG~s~~~-~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~ 358 (432)
..+|+.+|...||+|+|++... ..++-+.+++||.+||.|..|++...|.+.+..||++..-.+++++++|+|.++-|+
T Consensus 145 ~tlgLvVHaaaDGVALGaaattn~~svqiIVfvAImlHKaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~ivt~l 224 (303)
T KOG3907|consen 145 VTLGLVVHAAADGVALGAAATTNNDSVQIIVFVAIMLHKAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIVTYL 224 (303)
T ss_pred eEEEEEEeeccccceecccccccCCcEEEeehhHHHHhcccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHHHHH
Confidence 3578999999999999976543 456668899999999999999999999999999999999999999999999999986
Q ss_pred H--h-----hhhHHHHHHHHHHHhhh-HHhHhhhhhhhhccC-------------cchHHHHHHHHHHHHHH
Q 014010 359 A--G-----IDYSGLDHVMVFACGGL-LPSFGRIVKRAASLD-------------TRKGSCGLIFGVGFATL 409 (432)
Q Consensus 359 ~--~-----~~~~~~~~~la~aaG~~-yi~~~ellPe~~~~~-------------~~~~~~~~~~G~~l~~~ 409 (432)
. + .++..++.+|-|++|+| |+++...+||....+ ++.....+++|.++=.+
T Consensus 225 li~q~s~~m~~~satGvlmLfSaGtfLYvatvhvlpe~~~~dh~l~vea~~g~~l~~~E~v~li~G~~iPlI 296 (303)
T KOG3907|consen 225 LILQHSKTMLSESATGVLMLFSAGTFLYVATVHVLPELSHTDHSLSVEATGGAVLPHDELVYLIIGALIPLI 296 (303)
T ss_pred hhhccChhhhhhhhcceeeeecCCeeEEEEEEEEccccCCCCcccccccccccccchhHHHHHHHhHHHHHH
Confidence 5 2 23344568899999999 999999999854311 13345556667655433
No 20
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.77 E-value=7.2e-11 Score=111.16 Aligned_cols=139 Identities=16% Similarity=0.236 Sum_probs=112.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHHHHHH
Q 014010 13 VLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVP 92 (432)
Q Consensus 13 ~~~~ial~lHs~~eGlaiG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~lGali 92 (432)
....+|+.+|..-||+|+|.+..++.. +.-+.+++||.+||.|..|++...+.+.+.-||+...--+++++++|+|.++
T Consensus 143 ~t~tlgLvVHaaaDGVALGaaattn~~-svqiIVfvAImlHKaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~iv 221 (303)
T KOG3907|consen 143 ITVTLGLVVHAAADGVALGAAATTNND-SVQIIVFVAIMLHKAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIV 221 (303)
T ss_pred ceeEEEEEEeeccccceecccccccCC-cEEEeehhHHHHhcccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHH
Confidence 456789999999999999987766543 2367899999999999999999999999999999998889999999999999
Q ss_pred HHHHhhh------hhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCC------------ChhHHHHHHHHHHHHHHHHH
Q 014010 93 SFICADA------FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEAS------------PTPVASAATISVAFMEALST 152 (432)
Q Consensus 93 g~~~~~~------~~~~l~~llafAaG~mL~va~~eLlPea~~~~~------------~~~~~l~~l~G~~l~~ll~~ 152 (432)
-++.... ++...+.++-|++|+++|+++.+.+||.-..+. ++.-...+++|.++-.++..
T Consensus 222 t~lli~q~s~~m~~~satGvlmLfSaGtfLYvatvhvlpe~~~~dh~l~vea~~g~~l~~~E~v~li~G~~iPlIis~ 299 (303)
T KOG3907|consen 222 TYLLILQHSKTMLSESATGVLMLFSAGTFLYVATVHVLPELSHTDHSLSVEATGGAVLPHDELVYLIIGALIPLIISY 299 (303)
T ss_pred HHHhhhccChhhhhhhhcceeeeecCCeeEEEEEEEEccccCCCCcccccccccccccchhHHHHHHHhHHHHHHHHh
Confidence 8876432 223457889999999999999999999775321 22336677778777766643
No 21
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.80 E-value=7 Score=41.93 Aligned_cols=118 Identities=9% Similarity=-0.129 Sum_probs=61.6
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHHhhhc--------cchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHH
Q 014010 272 VLTLQSFLSCGAVALHALAEGLALGVAAP--------KAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAA 343 (432)
Q Consensus 272 ~~~~~~~~l~~al~lH~~~EGlaiG~s~~--------~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~ 343 (432)
+..|.+..+.+.+.+=.-+.|+..=..+. -+.........++.+=|+|-.+.- +..-....||+.++...
T Consensus 265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~--~~lid~~gRRpLll~~~ 342 (485)
T KOG0569|consen 265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVS--PFLIDRLGRRPLLLISL 342 (485)
T ss_pred cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCcHHHHHHH
Confidence 34555555555556556666665422211 123334566778888888855543 33334555666555554
Q ss_pred HHHhhhHHHHHHHHHH-hhhhHH---------HH--HHHHHHHhhh-HHhHhhhhhhhhcc
Q 014010 344 LIGFMGPTSAIGAILA-GIDYSG---------LD--HVMVFACGGL-LPSFGRIVKRAASL 391 (432)
Q Consensus 344 l~al~~plGa~lg~~~-~~~~~~---------~~--~~la~aaG~~-yi~~~ellPe~~~~ 391 (432)
......-+-..+.... +....+ .. ...++.-|-+ |....||.|.+.|.
T Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~ 403 (485)
T KOG0569|consen 343 SLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARS 403 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchH
Confidence 4433333333333222 111111 11 2234455678 99999999977654
No 22
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=75.52 E-value=59 Score=28.89 Aligned_cols=120 Identities=15% Similarity=0.096 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhhhHHHHH-HHHHhhcCCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHH
Q 014010 10 AKVVLVIGIMTLHSFGEGSG-VGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPI 88 (432)
Q Consensus 10 ~~~~~~~ial~lHs~~eGla-iG~~~~~~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~l 88 (432)
.-..+...+.-++.+.+|.. ++..+ -..+.+-.++=++-|=++-....++.|-|++..+ ...+
T Consensus 7 PG~~l~~~g~l~~~~~~g~~~~~~~~--------l~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~--------ga~i 70 (140)
T PF04306_consen 7 PGTPLIWLGILLYAFFTGFSEFGWWF--------LAILAVLALLGEVLDYLAGAYGAKRFGASRWGIW--------GAII 70 (140)
T ss_pred ChHHHHHHHHHHHHHHcCCCcccHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH--------HHHH
Confidence 33456677888888887766 44332 1222333356677777778888888898888665 4556
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHHHHHHHHHHHHH
Q 014010 89 VAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALSTLF 154 (432)
Q Consensus 89 Galig~~~~~~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G~~l~~ll~~~l 154 (432)
|+++|.++... . ++-.|.++.+-..|++ +.++..+......+.+.|+....+.+...
T Consensus 71 G~IvG~f~~~p----~----G~iiG~~~Ga~l~El~-~~~~~~~A~~~~~ga~~g~~~g~~~k~~~ 127 (140)
T PF04306_consen 71 GGIVGFFVLPP----L----GLIIGPFLGAFLGELL-RGKDFRRALRAGIGALVGFLAGTLIKLVL 127 (140)
T ss_pred HHHHHHHHhhH----H----HHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777765431 1 4444555555555763 22222223355667777877777776654
No 23
>PRK11469 hypothetical protein; Provisional
Probab=75.35 E-value=71 Score=29.79 Aligned_cols=22 Identities=27% Similarity=0.300 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHHh
Q 014010 276 QSFLSCGAVALHALAEGLALGV 297 (432)
Q Consensus 276 ~~~~l~~al~lH~~~EGlaiG~ 297 (432)
..+++.++.+++++.-|+..+.
T Consensus 107 ~~l~LaiAtSiDAlavGi~~~~ 128 (188)
T PRK11469 107 LLVTTAIATSLDAMAVGVGLAF 128 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888999999888886654
No 24
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=65.24 E-value=56 Score=24.76 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHH----hHHHHHHHHHHHHh
Q 014010 59 LAVSMMLASKGVSPQNAMLWSIITS----LPQPIVAVPSFICA 97 (432)
Q Consensus 59 ~a~~~~L~~~g~s~~~a~l~~~l~~----l~t~lGalig~~~~ 97 (432)
++++...--.+.++++.+..++..+ +++.+|..+|..+.
T Consensus 6 f~vg~~~g~~~~~~~~~~~~~~~ig~~~~~~~~~G~~~G~~~~ 48 (67)
T PF02659_consen 6 FAVGISYGLRGISRRIILLIALIIGIFQFIMPLLGLLLGRRLG 48 (67)
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333555555555544444 44555555555443
No 25
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=57.28 E-value=2.7e+02 Score=29.74 Aligned_cols=171 Identities=15% Similarity=0.156 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHHHH----Hhhc---CCcchhHHHHHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHH
Q 014010 8 DAAKVVLVIGIMTLHSFGEGSGVGV----SFAG---SKGFSQGLLVTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSI 80 (432)
Q Consensus 8 ~~~~~~~~~ial~lHs~~eGlaiG~----~~~~---~~~~~~g~~l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~ 80 (432)
+.|.....+++-.+=+ ||+..=. -+.. +.+...-..+.+.+-+=-+|=++..+..-.+-|.+.++.+...+
T Consensus 279 ~~~~~~~fLia~~l~~--dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l 356 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYS--DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL 356 (477)
T ss_pred hChHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 3455556666666544 6655422 2222 11111122222333333344333333333344555457777777
Q ss_pred HHHhHHHHHHHHHHHHhh--hhhhhhhHHHHHHHHHHHHHH-------HHhcchhhhhcCCC-hhH---HHHHHHHHHHH
Q 014010 81 ITSLPQPIVAVPSFICAD--AFNKFLPFCTGFAAGCMIWMV-------IAEVLPDAFKEASP-TPV---ASAATISVAFM 147 (432)
Q Consensus 81 l~~l~t~lGalig~~~~~--~~~~~l~~llafAaG~mL~va-------~~eLlPea~~~~~~-~~~---~l~~l~G~~l~ 147 (432)
+.....++-+++|..... ..+++.-+.+++-.|.++.-. +.+++|+.++.... .+. -..-++|=+++
T Consensus 357 ~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 357 ILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 777788888888776533 344444555555555555432 57999997764311 111 22344554444
Q ss_pred HHHHHHHhhhccccCCCCccchhhhhhhcccchhhHHHHHHHhhh
Q 014010 148 EALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHA 192 (432)
Q Consensus 148 ~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 192 (432)
-++....+. .-++.++-+.=|+.|+.++..+|.
T Consensus 437 g~i~~~tg~------------~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 437 GLITDATGS------------QRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHhCC------------chhHHHHHHHHHHHHHHHHhhccc
Confidence 444443321 115566556566688888877655
No 26
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=57.03 E-value=96 Score=30.48 Aligned_cols=76 Identities=9% Similarity=-0.099 Sum_probs=52.4
Q ss_pred hcCCChHHHHHHHHHHHhhhHHHHHHHHHH---h---hhhHHHHHHHHHHHhhh--HHhHhhhhhhhhccCc-chHHHHH
Q 014010 330 GATASLPASLAAAALIGFMGPTSAIGAILA---G---IDYSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGL 400 (432)
Q Consensus 330 ~~~~s~~~al~~~~l~al~~plGa~lg~~~---~---~~~~~~~~~la~aaG~~--yi~~~ellPe~~~~~~-~~~~~~~ 400 (432)
-.|.+|.++.-++++.+++..+|+.+--.. . ........+.++.+... |++..-++-=.++++- ....+++
T Consensus 174 ~~G~~r~~A~~fSFllsiP~ilga~~l~~~~~~~~~~~~~~~~~~~ig~~~afv~g~l~i~~ll~~~~~~~~~~F~~Y~~ 253 (259)
T PF02673_consen 174 LLGLDREEAARFSFLLSIPAILGAGLLELKDLFSAGLDSGSWPPLLIGFVVAFVVGYLAIKWLLRFLKRRKLRPFAIYRI 253 (259)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceeehhHHh
Confidence 479999999999999999999998774332 1 12344556666665555 7777777754444433 5577778
Q ss_pred HHHHH
Q 014010 401 IFGVG 405 (432)
Q Consensus 401 ~~G~~ 405 (432)
++|..
T Consensus 254 ~lg~~ 258 (259)
T PF02673_consen 254 ILGII 258 (259)
T ss_pred hHHHh
Confidence 87765
No 27
>PRK00281 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=55.61 E-value=1.9e+02 Score=28.54 Aligned_cols=79 Identities=13% Similarity=-0.065 Sum_probs=52.4
Q ss_pred hcCCChHHHHHHHHHHHhhhHHHHHHHHHHhh-h----hHHHHHHHHHHHhhh--HHhHhhhhhhhhccCc-chHHHHHH
Q 014010 330 GATASLPASLAAAALIGFMGPTSAIGAILAGI-D----YSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGLI 401 (432)
Q Consensus 330 ~~~~s~~~al~~~~l~al~~plGa~lg~~~~~-~----~~~~~~~la~aaG~~--yi~~~ellPe~~~~~~-~~~~~~~~ 401 (432)
-.|.+|..+.-++++.+++..+|+.+--.... . ......+.++....+ |++..-++-=.++++- ...+++++
T Consensus 178 ~~G~~r~~Aa~fSFLlsiPai~gA~~l~~~~~~~~~~~~~~~~~~~g~i~afi~g~~~I~~ll~~~~~~~~~~F~~Yri~ 257 (268)
T PRK00281 178 LLGLSREAAAEFSFLLAIPAMLGASLLDLLKLFHLLSAADLPLLAVGFVVAFVVALIAIKWLLKYIKRHSFTPFAIYRII 257 (268)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceehHHHHHH
Confidence 37899999999999999999999877432111 0 112234555554444 7777777754444433 56788898
Q ss_pred HHHHHHH
Q 014010 402 FGVGFAT 408 (432)
Q Consensus 402 ~G~~l~~ 408 (432)
+|..+..
T Consensus 258 lG~i~l~ 264 (268)
T PRK00281 258 LGALLLI 264 (268)
T ss_pred HHHHHHH
Confidence 8877654
No 28
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=54.09 E-value=1e+02 Score=30.24 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=13.9
Q ss_pred CCCChHHHHHHHHHHHhHHHHHHHH
Q 014010 68 KGVSPQNAMLWSIITSLPQPIVAVP 92 (432)
Q Consensus 68 ~g~s~~~a~l~~~l~~l~t~lGali 92 (432)
.|.+|.++.-++++-+++..+|+.+
T Consensus 175 ~G~~r~~A~~fSFllsiP~ilga~~ 199 (259)
T PF02673_consen 175 LGLDREEAARFSFLLSIPAILGAGL 199 (259)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555544
No 29
>COG3859 Predicted membrane protein [Function unknown]
Probab=53.94 E-value=83 Score=29.03 Aligned_cols=70 Identities=14% Similarity=0.095 Sum_probs=43.5
Q ss_pred HHHhhhhHHHHHHHHHHHhhhHHhHhhhhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCc
Q 014010 357 ILAGIDYSGLDHVMVFACGGLLPSFGRIVKRAASLDTRKGSCGLIFGVGFATLCLTCTKLVCLHTPYCNSAPEA 430 (432)
Q Consensus 357 ~~~~~~~~~~~~~la~aaG~~yi~~~ellPe~~~~~~~~~~~~~~~G~~l~~~~l~~~~~~~~~~~~~~~~~~~ 430 (432)
|....++.+++++++|.+ +.+..+.....+.++....-..+.|..+..+.=++.-..+=+-|+-+.||+-
T Consensus 74 Y~lhpsQ~~ldYilaf~~----iG~aG~F~~~~~~~~~k~i~~~~~~~~~av~lRyl~HfisGivFfgsyApkG 143 (185)
T COG3859 74 YILHPSQVLLDYILAFMA----IGFAGLFASSVRKQKKKLINKALGGVFIAVFLRYLFHFISGIVFFGSYAPKG 143 (185)
T ss_pred hhccHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeccCCCC
Confidence 555678888999999877 4444555433333222222334445555555666677777778888888873
No 30
>PRK00281 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=49.51 E-value=2.5e+02 Score=27.76 Aligned_cols=24 Identities=25% Similarity=0.360 Sum_probs=13.7
Q ss_pred CCChHHHHHHHHHHHhHHHHHHHH
Q 014010 69 GVSPQNAMLWSIITSLPQPIVAVP 92 (432)
Q Consensus 69 g~s~~~a~l~~~l~~l~t~lGali 92 (432)
|.+|..+.-++++-+++..+|+.+
T Consensus 180 G~~r~~Aa~fSFLlsiPai~gA~~ 203 (268)
T PRK00281 180 GLSREAAAEFSFLLAIPAMLGASL 203 (268)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555666666555555554
No 31
>PRK12554 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=48.02 E-value=2.3e+02 Score=28.15 Aligned_cols=79 Identities=13% Similarity=-0.091 Sum_probs=52.0
Q ss_pred cCCChHHHHHHHHHHHhhhHHHHHHHHHH---hhh---hHHHHHHHHHHHhhh--HHhHhhhhhhhhccCc-chHHHHHH
Q 014010 331 ATASLPASLAAAALIGFMGPTSAIGAILA---GID---YSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGLI 401 (432)
Q Consensus 331 ~~~s~~~al~~~~l~al~~plGa~lg~~~---~~~---~~~~~~~la~aaG~~--yi~~~ellPe~~~~~~-~~~~~~~~ 401 (432)
.|.+|..+.-++++.+++..+|+.+--.. +.. ......+.++....+ |++..-++-=.++++- ...+++++
T Consensus 181 ~G~~r~~Aa~fSFllsiP~i~gA~~l~~~~~~~~~~~~~~~~~~~~g~i~afi~~~l~i~~ll~~~~~~~~~~Fa~Yr~~ 260 (276)
T PRK12554 181 LGLTREAAARFSFLLAIPAVFGAGLLELYKIFHDPNASTLLGPTAVAFIVAFIVGYISIAWFMNFLKKGSLKYFAIYRII 260 (276)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEEehHHHH
Confidence 68999999999999999999998774321 111 122234455554444 7777777654444432 56788899
Q ss_pred HHHHHHHH
Q 014010 402 FGVGFATL 409 (432)
Q Consensus 402 ~G~~l~~~ 409 (432)
+|..+...
T Consensus 261 lG~~~l~~ 268 (276)
T PRK12554 261 LGVLLLIL 268 (276)
T ss_pred HHHHHHHH
Confidence 99877643
No 32
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=47.06 E-value=3e+02 Score=27.32 Aligned_cols=81 Identities=11% Similarity=-0.039 Sum_probs=53.8
Q ss_pred cCCChHHHHHHHHHHHhhhHHHHHHHHHHh-----hhhHHHHHHHHHHHhhh--HHhHhhhhhhhhccCc-chHHHHHHH
Q 014010 331 ATASLPASLAAAALIGFMGPTSAIGAILAG-----IDYSGLDHVMVFACGGL--LPSFGRIVKRAASLDT-RKGSCGLIF 402 (432)
Q Consensus 331 ~~~s~~~al~~~~l~al~~plGa~lg~~~~-----~~~~~~~~~la~aaG~~--yi~~~ellPe~~~~~~-~~~~~~~~~ 402 (432)
-|.+|..+.-++++.+.++.+||..--+.. ..........|+.+... |++..-++-=.++++- ...++.+++
T Consensus 180 lG~~r~~AaefSFlLaIP~m~GA~~l~l~k~~~~~~~~~~~~l~vg~i~AFvv~~~~I~~ll~~i~~~~~~~F~~Yrivl 259 (270)
T COG1968 180 LGLSREAAAEFSFLLAIPAMFGASALDLFKSGDALSAADLPILLVGFIVAFVVSLIAIKFLLRFIKRHSFIPFAIYRIVL 259 (270)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehHHHHHHH
Confidence 588999999999999999999987653321 12222334455555545 6666666644455543 667888889
Q ss_pred HHHHHHHHH
Q 014010 403 GVGFATLCL 411 (432)
Q Consensus 403 G~~l~~~~l 411 (432)
|..+.....
T Consensus 260 gi~~l~~~~ 268 (270)
T COG1968 260 GIVVLVLLF 268 (270)
T ss_pred HHHHHHHHH
Confidence 988876653
No 33
>PRK12554 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=38.75 E-value=3.6e+02 Score=26.79 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=15.7
Q ss_pred CCCChHHHHHHHHHHHhHHHHHHHHH
Q 014010 68 KGVSPQNAMLWSIITSLPQPIVAVPS 93 (432)
Q Consensus 68 ~g~s~~~a~l~~~l~~l~t~lGalig 93 (432)
.|.+|..+.-++++-++++.+|+.+-
T Consensus 181 ~G~~r~~Aa~fSFllsiP~i~gA~~l 206 (276)
T PRK12554 181 LGLTREAAARFSFLLAIPAVFGAGLL 206 (276)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666666666666666666553
No 34
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.69 E-value=1.2e+02 Score=26.00 Aligned_cols=15 Identities=7% Similarity=-0.133 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHhh
Q 014010 84 LPQPIVAVPSFICAD 98 (432)
Q Consensus 84 l~t~lGalig~~~~~ 98 (432)
-.+.+|+.+|+++.+
T Consensus 54 sGilVGa~iG~llD~ 68 (116)
T COG5336 54 SGILVGAGIGWLLDK 68 (116)
T ss_pred HHHHHHHHHHHHHHH
Confidence 356677777776654
No 35
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=33.14 E-value=3.5e+02 Score=23.96 Aligned_cols=117 Identities=15% Similarity=-0.016 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhhhhHHH-HHhhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHH
Q 014010 277 SFLSCGAVALHALAEGLA-LGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIG 355 (432)
Q Consensus 277 ~~~l~~al~lH~~~EGla-iG~s~~~~~~~g~~l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~l 355 (432)
..++..|..++.+.+|.. ++.. .+ ..+++-..+-++-|=++-....++.|.||+..+ ...+|+++
T Consensus 9 ~~l~~~g~l~~~~~~g~~~~~~~-----~l-~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~--------ga~iG~Iv 74 (140)
T PF04306_consen 9 TPLIWLGILLYAFFTGFSEFGWW-----FL-AILAVLALLGEVLDYLAGAYGAKRFGASRWGIW--------GAIIGGIV 74 (140)
T ss_pred HHHHHHHHHHHHHHcCCCcccHH-----HH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH--------HHHHHHHH
Confidence 356778899999988876 4432 12 222333356667777888888899999998765 33466666
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhHHhHhhhhhhhhccCcchHHHHHHHHHHHHHHHHHH
Q 014010 356 AILAGIDYSGLDHVMVFACGGLLPSFGRIVKRAASLDTRKGSCGLIFGVGFATLCLTC 413 (432)
Q Consensus 356 g~~~~~~~~~~~~~la~aaG~~yi~~~ellPe~~~~~~~~~~~~~~~G~~l~~~~l~~ 413 (432)
|.++..+ ...+++... -.-..|++-..+.++..+...+.+.|+....+.-..
T Consensus 75 G~f~~~p---~G~iiG~~~---Ga~l~El~~~~~~~~A~~~~~ga~~g~~~g~~~k~~ 126 (140)
T PF04306_consen 75 GFFVLPP---LGLIIGPFL---GAFLGELLRGKDFRRALRAGIGALVGFLAGTLIKLV 126 (140)
T ss_pred HHHHhhH---HHHHHHHHH---HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6553111 123333333 344456642111111144445555555544444333
No 36
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=32.55 E-value=4.3e+02 Score=24.87 Aligned_cols=51 Identities=16% Similarity=0.207 Sum_probs=30.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCChHHHHHHHHHHHhHHHHHHHHHHHHhh
Q 014010 46 VTLAIAVHNIPEGLAVSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICAD 98 (432)
Q Consensus 46 l~iaI~lH~ipeg~a~~~~L~~~g~s~~~a~l~~~l~~l~t~lGalig~~~~~ 98 (432)
+.++..+-.+--+++.+ +...+.+.+.++..+++..+++.+|..+|..+.+
T Consensus 6 laials~Daf~vgi~~G--~~~~~~~~~~~l~ig~~~~~~~~lg~~~G~~~~~ 56 (206)
T TIGR02840 6 LAFAVSLDSFGVGIAYG--LRKIKIPFLSNLIIAVISGLFIFISMLLGKFLAK 56 (206)
T ss_pred HHHHHHHHHHHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444443 2222335567777778888888888888877654
No 37
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=28.77 E-value=4e+02 Score=27.91 Aligned_cols=61 Identities=13% Similarity=-0.049 Sum_probs=35.7
Q ss_pred HhcCCChHHHHHHHH-HHHhhhHHHHHHHHHHhhhhHHHHHHHHHHHhhh-H---HhHhhhhhhhhcc
Q 014010 329 YGATASLPASLAAAA-LIGFMGPTSAIGAILAGIDYSGLDHVMVFACGGL-L---PSFGRIVKRAASL 391 (432)
Q Consensus 329 ~~~~~s~~~al~~~~-l~al~~plGa~lg~~~~~~~~~~~~~la~aaG~~-y---i~~~ellPe~~~~ 391 (432)
..++.+||+.+++.. ++.+...+.++.--+ ..--....+.+++.|.| - ....++.|+.++-
T Consensus 71 lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f--~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~ 136 (394)
T COG2814 71 LTGRLERRRLLLGLLALFIVSNLLSALAPSF--AVLLLARALAGLAHGVFWSIAAALAARLVPPGKRG 136 (394)
T ss_pred HHcccchHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchh
Confidence 345778888876644 444444444433211 01123458889999998 3 3445888877664
No 38
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=28.40 E-value=8.1e+02 Score=26.74 Aligned_cols=97 Identities=8% Similarity=0.052 Sum_probs=52.5
Q ss_pred HhHHHHHHHHHHHHhh---hhhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHHHHHHHHHHHHHhhhcc
Q 014010 83 SLPQPIVAVPSFICAD---AFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALSTLFQNLSH 159 (432)
Q Consensus 83 ~l~t~lGalig~~~~~---~~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G~~l~~ll~~~l~~~~~ 159 (432)
-++|.+|+..+..+.. .++......+++-.|...|.+... ++.......+.|+....+.-....
T Consensus 53 ~~GT~iGa~~~~~lv~~~~~~p~l~~~~lal~i~~c~~~~~~~---------~~~~~y~~~lag~T~~iv~~~~~~---- 119 (650)
T PF04632_consen 53 LIGTLIGAAAGLLLVALFPQSPLLFLLALALWIGLCLYLSLLD---------RNFRSYAFMLAGYTAAIVALPAVG---- 119 (650)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---------CCcchHHHHHHHHHHHHHHhhccc----
Confidence 3445555555554432 244445556666667777766631 112223344455544443322111
Q ss_pred ccCCCCccchhhhhhhcccchhhHHHHHHHhhhhccch
Q 014010 160 DYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQH 197 (432)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 197 (432)
+.++.+--.+....+...|++...+++.+..|.
T Consensus 120 -----~p~~~f~~a~~R~~ei~iGi~~a~~v~~l~~P~ 152 (650)
T PF04632_consen 120 -----NPEQVFDLALWRVLEILIGILCATLVSMLFFPQ 152 (650)
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 112334456677788888999988888888763
No 39
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=28.09 E-value=8.6e+02 Score=27.36 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhhhhh-----hhh---hHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHHH
Q 014010 73 QNAMLWSIITSLPQPIVAVPSFICADAFN-----KFL---PFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISV 144 (432)
Q Consensus 73 ~~a~l~~~l~~l~t~lGalig~~~~~~~~-----~~l---~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G~ 144 (432)
++.+.+-++......+..++|.++.+..+ +.+ -+.-++-.-+..|....-++|+......++..+.+.++|+
T Consensus 233 ~~~v~~Pl~i~~~gii~Siig~~~v~~~~~~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~~~~~~f~~~~iGl 312 (666)
T PRK00733 233 VAGVLFPLLIAAVGIIASIIGIFFVRLGKGGNPMKALNRGLIVTAVLSIVLTYFATYWLLGDGADGFTWLNLFGAVLIGL 312 (666)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHeeEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHH
Confidence 45566667777777777777777654111 111 1122222233334444455654222223445566777777
Q ss_pred HHHHHHHHHHh
Q 014010 145 AFMEALSTLFQ 155 (432)
Q Consensus 145 ~l~~ll~~~l~ 155 (432)
....++..+.|
T Consensus 313 v~g~li~~iTe 323 (666)
T PRK00733 313 VVGALIGLITE 323 (666)
T ss_pred HHHHHHHHHHh
Confidence 77666666544
No 40
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=26.04 E-value=3.9e+02 Score=22.24 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=36.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhhhcCCChhHHHHHHHHHHHHHHHHHHHhhhccccC
Q 014010 100 FNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVAFMEALSTLFQNLSHDYN 162 (432)
Q Consensus 100 ~~~~l~~llafAaG~mL~va~~eLlPea~~~~~~~~~~l~~l~G~~l~~ll~~~l~~~~~~~~ 162 (432)
+.++++. +++..|+++.....-+-++. .-....+.+.+.|...--+.|.+-.+ +.+|+
T Consensus 32 ~~K~iPl-Is~viGilLG~~~~~~~~~~---~l~~~~~aG~laGlAaTGL~e~~t~r-~~~~~ 89 (93)
T PF06946_consen 32 PNKWIPL-ISVVIGILLGAAAYPLTGDG---NLALMAWAGGLAGLAATGLFEQFTNR-SKKYG 89 (93)
T ss_pred CcchhhH-HHHHHHHHHHHHhhhcCCCc---cHHHHHHHHHHhhhhhhhHHHHHHhh-hhhcC
Confidence 5567764 56777777777654332211 11123577888999888888887664 66776
No 41
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=25.47 E-value=6.8e+02 Score=24.89 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=12.5
Q ss_pred CCChHHHHHHHHHHHhHHHHHHHHH
Q 014010 69 GVSPQNAMLWSIITSLPQPIVAVPS 93 (432)
Q Consensus 69 g~s~~~a~l~~~l~~l~t~lGalig 93 (432)
|.+|..+.-++++-++++.+|+-.-
T Consensus 181 G~~r~~AaefSFlLaIP~m~GA~~l 205 (270)
T COG1968 181 GLSREAAAEFSFLLAIPAMFGASAL 205 (270)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555433
No 42
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=24.46 E-value=1.9e+02 Score=23.54 Aligned_cols=45 Identities=13% Similarity=0.034 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHhhhHHhHhhhhhhhhccC-cchHHHHHHHHHHHHH
Q 014010 363 YSGLDHVMVFACGGLLPSFGRIVKRAASLD-TRKGSCGLIFGVGFAT 408 (432)
Q Consensus 363 ~~~~~~~la~aaG~~yi~~~ellPe~~~~~-~~~~~~~~~~G~~l~~ 408 (432)
...+++++++++.++|. ....-||.+++. -.+...+++.|..+..
T Consensus 8 ~~iLgi~l~~~~~~Ly~-lr~~~Pev~Rd~D~~fs~vgLl~g~IL~~ 53 (84)
T PF07444_consen 8 SYILGIILILGGLALYF-LRFFRPEVSRDYDIFFSSVGLLYGLILWF 53 (84)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHCcchhhhhhHHHHHHHHHHHHHHHH
Confidence 34566777775555575 467888887764 4777788887766654
No 43
>TIGR03055 photo_alph_chp2 putative photosynthetic complex assembly protein 2. This uncharacterized protein family was identified, by the method of partial phylogenetic profiling, as having a matching phylogenetic distribution to that of the photosynthetic reaction center of the alpha-proteobacterial type. It is nearly always encoded near other photosynthesis-related genes, including puhA.
Probab=22.87 E-value=3.5e+02 Score=26.46 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=42.8
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHH
Q 014010 61 VSMMLASKGVSPQNAMLWSIITSLPQPIVAVPSFICADAFNKFLPFCTGFAAGCMIWMV 119 (432)
Q Consensus 61 ~~~~L~~~g~s~~~a~l~~~l~~l~t~lGalig~~~~~~~~~~l~~llafAaG~mL~va 119 (432)
.+..+.......++...++.+.+....+.++.|+.....+....+.-++|.++.++---
T Consensus 14 TG~iL~~ld~~~~~~~~~s~~~~t~ll~~~l~gl~~t~~d~sv~gaY~aF~~al~vWgW 72 (245)
T TIGR03055 14 TGAVLWLLDSLGRSTHLRSVVAGLPLLTGGLWGLSATADDVSVGGAYVAFTCAIFVWGW 72 (245)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 33444412334455688888888888899999988777777888889999998887543
No 44
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=22.41 E-value=8.6e+02 Score=24.99 Aligned_cols=89 Identities=19% Similarity=0.134 Sum_probs=46.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHh--------------cchhhhhc---CCChhHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 014010 102 KFLPFCTGFAAGCMIWMVIAE--------------VLPDAFKE---ASPTPVASAATISVAFMEALSTLFQNLSHDYNSQ 164 (432)
Q Consensus 102 ~~l~~llafAaG~mL~va~~e--------------LlPea~~~---~~~~~~~l~~l~G~~l~~ll~~~l~~~~~~~~~~ 164 (432)
.....+++.-+|.|+.++.+- .=|...+. .+..+..+++++|-.++.++-...-+ .+.++.
T Consensus 45 ~~ar~lLstia~smitv~~~~fSi~~val~~assq~sPR~l~~f~~d~~~q~vLg~Figtfvy~l~~l~~i~-~~~~~~- 122 (371)
T PF10011_consen 45 DGARTLLSTIAGSMITVTGFVFSITLVALQLASSQFSPRLLRNFMRDRVTQVVLGTFIGTFVYSLLVLIAIR-SGDYGS- 122 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHcc-cccccc-
Confidence 345566677777777665421 11444432 23345677777777777766554332 112211
Q ss_pred CccchhhhhhhcccchhhHHHHHHHhhhhc
Q 014010 165 DASGYFVSLLFGLGPLLGGIVLLAFAHAFS 194 (432)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (432)
..........+..+++=+.++++||.+.
T Consensus 123 --~p~~~~~~a~~l~i~~v~~li~fI~~i~ 150 (371)
T PF10011_consen 123 --VPRLSVFIALALAILSVVLLIYFIHHIA 150 (371)
T ss_pred --CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233333444445567788888766
No 45
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=21.98 E-value=6.7e+02 Score=23.56 Aligned_cols=49 Identities=18% Similarity=0.195 Sum_probs=28.8
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhcCCChHHHHHHHHHHHhhhHHHHHHHHHH
Q 014010 309 MVLPVSLHGLPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA 359 (432)
Q Consensus 309 l~iaI~lH~iPeg~a~~~~l~~~~~s~~~al~~~~l~al~~plGa~lg~~~ 359 (432)
+++|..+-.+--+++.+ ++....+.+..+..++...+++.+|..+|..+
T Consensus 6 laials~Daf~vgi~~G--~~~~~~~~~~~l~ig~~~~~~~~lg~~~G~~~ 54 (206)
T TIGR02840 6 LAFAVSLDSFGVGIAYG--LRKIKIPFLSNLIIAVISGLFIFISMLLGKFL 54 (206)
T ss_pred HHHHHHHHHHHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444443 33333355666777778888888888888654
No 46
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.08 E-value=6.8e+02 Score=23.31 Aligned_cols=7 Identities=14% Similarity=0.102 Sum_probs=2.8
Q ss_pred HHHHhhh
Q 014010 371 VFACGGL 377 (432)
Q Consensus 371 a~aaG~~ 377 (432)
++.+|.+
T Consensus 120 ~i~~G~~ 126 (206)
T PF06570_consen 120 SIVGGLV 126 (206)
T ss_pred HHHHHHH
Confidence 3344433
Done!