Query 014012
Match_columns 432
No_of_seqs 63 out of 65
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 03:54:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8i_A Putative dioxygenase; Y 14.1 58 0.002 28.1 1.2 18 384-401 69-86 (117)
2 2peb_A Putative dioxygenase; s 12.9 66 0.0022 28.0 1.2 18 384-401 66-83 (122)
3 4hkr_A Calcium release-activat 8.8 8.5E+02 0.029 23.0 7.2 124 21-158 2-136 (214)
4 3nkl_A UDP-D-quinovosamine 4-d 8.6 2.3E+02 0.0078 22.7 3.0 23 385-408 17-39 (141)
5 1qz7_B Axin; beta-catenin, pro 7.9 1.6E+02 0.0054 23.6 1.6 21 215-235 21-44 (70)
6 1xou_A ESPA; coiled coil, heli 6.9 99 0.0034 28.9 0.0 27 387-413 107-138 (192)
7 3tqu_A Non-canonical purine NT 6.9 1.7E+02 0.0059 27.0 1.6 14 23-36 13-26 (203)
8 1vp2_A Putative xanthosine tri 6.7 1.9E+02 0.0065 27.0 1.8 16 304-319 184-199 (208)
9 3sao_A Extracellular fatty aci 6.7 2.1E+02 0.0071 23.9 2.0 29 16-44 114-142 (160)
10 1m45_B IQ2, IQ2 motif from MYO 6.7 52 0.0018 21.4 -1.4 11 388-398 6-16 (26)
No 1
>2p8i_A Putative dioxygenase; YP_555069.1, structural genomics, JOIN for structural genomics, JCSG, protein structure initiative oxidoreductase; HET: MSE CIT; 1.40A {Burkholderia xenovorans} SCOP: d.58.55.1 PDB: 2nyh_A*
Probab=14.11 E-value=58 Score=28.14 Aligned_cols=18 Identities=22% Similarity=0.471 Sum_probs=16.2
Q ss_pred HHHHHHHhhhCCCceEEE
Q 014012 384 RQALVNYFENNRAGITVF 401 (432)
Q Consensus 384 RQAlVtYLq~N~~GITvf 401 (432)
-.++|.+|+.||||.+|+
T Consensus 69 f~~~v~WL~~nrg~LsVL 86 (117)
T 2p8i_A 69 FADLVGWLTLNHGALDIF 86 (117)
T ss_dssp HHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHHhCCCCeEE
Confidence 458999999999999987
No 2
>2peb_A Putative dioxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 1.46A {Nostoc punctiforme}
Probab=12.87 E-value=66 Score=28.03 Aligned_cols=18 Identities=22% Similarity=0.477 Sum_probs=16.1
Q ss_pred HHHHHHHhhhCCCceEEE
Q 014012 384 RQALVNYFENNRAGITVF 401 (432)
Q Consensus 384 RQAlVtYLq~N~~GITvf 401 (432)
-.++|.||+.||||.+|+
T Consensus 66 f~~~v~WL~lnrg~LsVL 83 (122)
T 2peb_A 66 FDKVVPWLMLNREGLDIL 83 (122)
T ss_dssp HHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHHhCCCceEE
Confidence 348999999999999997
No 3
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=8.78 E-value=8.5e+02 Score=23.04 Aligned_cols=124 Identities=20% Similarity=0.249 Sum_probs=50.3
Q ss_pred cchhHHHHHHHHHhhhheecCCCcchhHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCcchhh----------hhhh
Q 014012 21 SHAQDELHSFRSYLKWMCVDQSNCFTACLSWSMFVLFTIVVPAISHFVLACDTCDGTHKRPYDGVV----------QLSL 90 (432)
Q Consensus 21 s~~~deLr~fr~~L~w~~ldqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~~cd~~~~~~f~~~V----------q~s~ 90 (432)
|...||++++ ..|.|=-++-|+--=++.||..=++-|++.-++.=+-++- +.++...+ ++..
T Consensus 2 ~~~~~~~h~~-~~l~~R~l~ls~aqLKA~S~lSALLaGFAMVAmVE~ql~~-------~~~~p~~LLi~fav~Ttllv~v 73 (214)
T 4hkr_A 2 SQSGEDLHSP-TYLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVEVQLDH-------DTNVPPGMLIAFAICTTLLVAV 73 (214)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------CHHHHHHHHHHHHHH
T ss_pred CcccccccCh-hhccHHHHHHHHHHHHHHHHHHHHHhccceeeEEEEeccC-------CCCCChHHHHHHHHHHHHHHHH
Confidence 4456666664 4566666677776667777777666666554443222210 11111111 1122
Q ss_pred hHHHHHHHHHhhhhhhhc-ccceeecccccCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhhe
Q 014012 91 SSVAALSFICLSSFVKKY-GLRRFLFLDKLCDESEMVRSRYMEQLNRSLKILSIFVLPCFLVESAYKIW 158 (432)
Q Consensus 91 s~lAavsf~cLS~~~rky-GLRr~LflD~l~~~s~~vr~gY~~~l~~sfRlLa~~vLPcf~~e~a~ki~ 158 (432)
-.+|.+-=-|+--+.-.| |+...- ..+|++--| ....++-++..-..+-++-|++|.|--.|
T Consensus 74 ml~AlMIsTcILPnIeav~~~h~~~----~v~esPH~r--~~~yIE~AW~fST~lGi~LFL~evall~W 136 (214)
T 4hkr_A 74 HMLALMISTCILPNIETVSNLHSIS----LVHESPHER--LHWYIETAWAFSTLLGLILFLLEIAILCW 136 (214)
T ss_dssp HHHHHHHHHHTTTC--------------------CHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHhhccccc----ccCCChHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhe
Confidence 222222112222222222 222221 133554433 34455566666678889999999998776
No 4
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=8.64 E-value=2.3e+02 Score=22.69 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=18.6
Q ss_pred HHHHHHhhhCCCceEEEEEeeehh
Q 014012 385 QALVNYFENNRAGITVFGFTLDRS 408 (432)
Q Consensus 385 QAlVtYLq~N~~GITvfGf~lDR~ 408 (432)
+.+..++++|+ |..+.||+-|..
T Consensus 17 ~~l~~~l~~~~-g~~vvg~~d~~~ 39 (141)
T 3nkl_A 17 LQLANMLRQGK-EFHPIAFIDDDR 39 (141)
T ss_dssp HHHHHHHHHSS-SEEEEEEECSCG
T ss_pred HHHHHHHHhCC-CcEEEEEEECCc
Confidence 45788898887 899999987764
No 5
>1qz7_B Axin; beta-catenin, protein-protein complex, cell adhesion; 2.20A {Xenopus laevis}
Probab=7.94 E-value=1.6e+02 Score=23.56 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=14.6
Q ss_pred hhHhhhcc---cCCHHHHHHHHHH
Q 014012 215 DFAQVFQT---DSDVDSVLAEHLR 235 (432)
Q Consensus 215 ~~~klfe~---~sdv~~il~EH~R 235 (432)
||..++-+ |.|..+||.||+.
T Consensus 21 g~~g~~~rd~~EedPesILDeHvs 44 (70)
T 1qz7_B 21 GCVGMQIRDAHEENPESILDEHVQ 44 (70)
T ss_pred cccccccccccccChHHHHHHHHH
Confidence 34444444 5699999999974
No 6
>1xou_A ESPA; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.1
Probab=6.94 E-value=99 Score=28.89 Aligned_cols=27 Identities=30% Similarity=0.623 Sum_probs=0.0
Q ss_pred HHHHhhhCCCceEEEEEe-----eehhhHHHH
Q 014012 387 LVNYFENNRAGITVFGFT-----LDRSTLHTI 413 (432)
Q Consensus 387 lVtYLq~N~~GITvfGf~-----lDR~~LhTI 413 (432)
.+.|++.-|-||||=|-. ||.|=|-++
T Consensus 107 VI~Ymrd~~NgItVdG~s~IddyLdkG~LqaV 138 (192)
T 1xou_A 107 VISYINDPRNDITISGIDNINAQLGAGDLQTV 138 (192)
T ss_dssp --------------------------------
T ss_pred HHHHHHccCCCeeecCchhHHHHhccccHHHH
Confidence 389999999999999999 888776654
No 7
>3tqu_A Non-canonical purine NTP pyrophosphatase; HAM1 protein, hydrolase; HET: MSE; 1.90A {Coxiella burnetii}
Probab=6.87 E-value=1.7e+02 Score=27.04 Aligned_cols=14 Identities=14% Similarity=0.235 Sum_probs=7.6
Q ss_pred hhHHHHHHHHHhhh
Q 014012 23 AQDELHSFRSYLKW 36 (432)
Q Consensus 23 ~~deLr~fr~~L~w 36 (432)
-...++.++..|.-
T Consensus 13 N~~K~~E~~~iL~~ 26 (203)
T 3tqu_A 13 NSSKLAEMQELLRD 26 (203)
T ss_dssp CHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHhhh
Confidence 34455566666643
No 8
>1vp2_A Putative xanthosine triphosphate pyrophosphatase/ protein homolog; structural genomics, joint center for structural genomics, JCSG; 1.78A {Thermotoga maritima} SCOP: c.51.4.1
Probab=6.74 E-value=1.9e+02 Score=26.96 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=8.6
Q ss_pred hhhhhhhhHHHHHhhh
Q 014012 304 KITHKAQAVTCLAAKW 319 (432)
Q Consensus 304 KITHRAQ~I~siAskW 319 (432)
+|+||++++--+...+
T Consensus 184 ~iSHR~kAl~~l~~~l 199 (208)
T 1vp2_A 184 KISHRSKAFRKLFSVL 199 (208)
T ss_dssp HHSHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHH
Confidence 5555555555555443
No 9
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=6.73 E-value=2.1e+02 Score=23.92 Aligned_cols=29 Identities=17% Similarity=0.109 Sum_probs=27.1
Q ss_pred ccccccchhHHHHHHHHHhhhheecCCCc
Q 014012 16 LSRSISHAQDELHSFRSYLKWMCVDQSNC 44 (432)
Q Consensus 16 ~~r~~s~~~deLr~fr~~L~w~~ldqSs~ 44 (432)
|.|++....+.++.|+...+-.|+|.++.
T Consensus 114 lsR~~~~~~e~~~~f~~~~~~~G~~~~~i 142 (160)
T 3sao_A 114 YSRSREVSPTAMAIFRKLARERNYTDEMV 142 (160)
T ss_dssp EESSSSCCHHHHHHHHHHHHTTTCCGGGE
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCCHHHE
Confidence 79999999999999999999999998874
No 10
>1m45_B IQ2, IQ2 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae}
Probab=6.68 E-value=52 Score=21.45 Aligned_cols=11 Identities=36% Similarity=0.842 Sum_probs=8.8
Q ss_pred HHHhhhCCCce
Q 014012 388 VNYFENNRAGI 398 (432)
Q Consensus 388 VtYLq~N~~GI 398 (432)
+.|||||-.|.
T Consensus 6 ikylqnnikgf 16 (26)
T 1m45_B 6 IKYLQNNIKGF 16 (26)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhccceE
Confidence 68999997664
Done!