BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014013
(432 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CP40|NUF2_CRYNJ Probable kinetochore protein NUF2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=NUF2 PE=3 SV=1
Length = 467
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 183/447 (40%), Gaps = 95/447 (21%)
Query: 6 YPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLLIFL-----DVLHEDDQ-- 58
+P L+A +I+ L +I E DL P +Y LL L + + Q
Sbjct: 15 FPLLTAHDILECLAALDIPAQME-DLTKPTAQSTQSIYGSLLEVLMGASINSIEGPKQAL 73
Query: 59 -GQLDFAALE---------QLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMNFTLKDLIR 108
G +++ L L +++ ++Q M + + + P +F + DL R
Sbjct: 74 LGMMEYKVLSFRSMKRTQINLSRQEMYSDTLQFMMFFKHCRRLALLCGIP-DFAISDLAR 132
Query: 109 PDATRTE-------------DTKMNLLRPIAEDLTRLDEQRSELEDKISQLNA---EIAA 152
PDA R D +M E+L + ++ +L K +L EI A
Sbjct: 133 PDANRLRKVLSGIMNFAKFRDERMQTQARFQENLQKHQKKAVDLRRKTEELETQFQEITA 192
Query: 153 YNEVRERELPLVQEVDAKVKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFD 212
N E P ++ + + L+ + +LN ++ +LK++ L E+ +
Sbjct: 193 RNAA---ERPQSEQAQKRNELLKSELLELNSQRLKEVQEYEELKKERQTLLEQVNHNNRI 249
Query: 213 LVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAMQSFQEKT--------- 263
+ Q Q +S++VQSP++++R + E A +EK + SFQ+K
Sbjct: 250 VTQLELQIGSAKSRLVQSPDRIKRHISEMSF----AIQSEKAKLASFQQKARELTNRLEV 305
Query: 264 -TTLEVYQKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSLKARLNDDVVLDKSLEAKLI 322
LEV + L + +A E+ +KS +L+AR LE + I
Sbjct: 306 IGALEVDLRGLIDLEHSIQDQRAKTEEAKRSKS------ALEAR----------LEGRQI 349
Query: 323 ERQGKVEQLDELQQQLE----------------KERN------LKSEDATRAFENVKLEM 360
E QG +L++LQ+QL+ +ER LK+E RA E + E
Sbjct: 350 ESQGLAAKLEQLQRQLQNASHKLARQEETRKGMRERGARRIDELKAEYKVRARE--RGEW 407
Query: 361 ESKRQDLEARQKKVEAVVTEVDAITSK 387
+ +R DL A QK++E +E+ A +K
Sbjct: 408 QKQRDDLLAEQKELE---SEMAAFVTK 431
>sp|P0CP41|NUF2_CRYNB Probable kinetochore protein NUF2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=NUF2 PE=3 SV=1
Length = 467
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 183/447 (40%), Gaps = 95/447 (21%)
Query: 6 YPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLLIFL-----DVLHEDDQ-- 58
+P L+A +I+ L +I E DL P +Y LL L + + Q
Sbjct: 15 FPLLTAHDILECLAALDIPAQME-DLTKPTAQSTQSIYGSLLEVLMGASINSIEGPKQAL 73
Query: 59 -GQLDFAALE---------QLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMNFTLKDLIR 108
G +++ L L +++ ++Q M + + + P +F + DL R
Sbjct: 74 LGMMEYKVLSFRSMKRTQINLSRQEMYSDTLQFMMFFKHCRRLALLCGIP-DFAISDLAR 132
Query: 109 PDATRTE-------------DTKMNLLRPIAEDLTRLDEQRSELEDKISQLNA---EIAA 152
PDA R D +M E+L + ++ +L K +L EI A
Sbjct: 133 PDANRLRKVLSGIMNFAKFRDERMQTQARFQENLQKHQKKAVDLRRKTEELETQFQEITA 192
Query: 153 YNEVRERELPLVQEVDAKVKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFD 212
N E P ++ + + L+ + +LN ++ +LK++ L E+ +
Sbjct: 193 RNAA---ERPQSEQAQKRNELLKSELLELNSQRLKEVQEYEELKKERQTLLEQVNHNNRI 249
Query: 213 LVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAMQSFQEKT--------- 263
+ Q Q +S++VQSP++++R + E A +EK + SFQ+K
Sbjct: 250 VTQLELQIGSAKSRLVQSPDRIKRHISEMSF----AIQSEKAKLASFQQKARELTNRLEV 305
Query: 264 -TTLEVYQKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSLKARLNDDVVLDKSLEAKLI 322
LEV + L + +A E+ +KS +L+AR LE + I
Sbjct: 306 IGALEVDLRGLIDLEHSIQDQRAKTEEAKRSKS------ALEAR----------LEGRQI 349
Query: 323 ERQGKVEQLDELQQQLE----------------KERN------LKSEDATRAFENVKLEM 360
E QG +L++LQ+QL+ +ER LK+E RA E + E
Sbjct: 350 ESQGLAAKLEQLQRQLQNASHKLARQEETRKGMRERGARRIDELKAEYKVRARE--RGEW 407
Query: 361 ESKRQDLEARQKKVEAVVTEVDAITSK 387
+ +R DL A QK++E +E+ A +K
Sbjct: 408 QKQRDDLLAEQKELE---SEMAAFVTK 431
>sp|Q6CJ06|NUF2_KLULA Probable kinetochore protein NUF2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NUF2 PE=3 SV=1
Length = 451
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 1 MSKFDYPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLL-IFLDVLHE---D 56
MSK +P L +E+VT L + ++ E ++ P+ +V LY +++ F+ V +
Sbjct: 1 MSKDVFPLLELSELVTCLQSCDFSLAVEENISKPSSQYVITLYKQIIDTFMGVSPDTLLS 60
Query: 57 DQGQLDFAALEQLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMNFTLKDLIRPDATRTE- 115
++ D + ++ + +V+++ L + + + +F + DL +PD+ RT
Sbjct: 61 NEALFDNSGSNDIQQNPAYTETVKVLALNKICFKFFQDIGVS-DFNMMDLYKPDSLRTRR 119
Query: 116 --DTKMNLLRPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVRERELPLVQEVDAKVKE 173
+N R E + D+ S+ E ++QL ++ YN ++++ E++ + E
Sbjct: 120 LLSAVVNYARFREERMFDCDKFMSKTEFLLNQLRSKFDDYNYLQQQINKHRNEIELREGE 179
Query: 174 LRQTIQDLNKH---QVS----LRTTLN 193
+T+Q NKH Q+S L+ TLN
Sbjct: 180 TFETLQQQNKHLDQQISRLKGLQETLN 206
>sp|Q9BZD4|NUF2_HUMAN Kinetochore protein Nuf2 OS=Homo sapiens GN=NUF2 PE=1 SV=2
Length = 464
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 152/347 (43%), Gaps = 58/347 (16%)
Query: 1 MSKFDYPRLSATEIVT-----ILTETEIAVITENDL-KNPNPDFVSDLYTRLLIFLDVLH 54
M +PR + EIV ILT + +T+NDL NP P+ + +Y R L
Sbjct: 1 METLSFPRYNVAEIVIHIRNKILTGADGKNLTKNDLYPNPKPEVLHMIYMRAL------- 53
Query: 55 EDDQGQLDFAA-LEQLENPDLH--VRSVQIMKLYSMVKEVVTTVN-----CPMN-FTLKD 105
Q+ + LE ++ V +M+ + +VT ++ C +N F D
Sbjct: 54 -----QIVYGIRLEHFYMMPVNSEVMYPHLMEGFLPFSNLVTHLDSFLPICRVNDFETAD 108
Query: 106 LIRPDATRTEDTKMNLLRPIA------EDLTRLDEQRSELEDKISQLNAEIAAYNEV--- 156
++ P A RT ++ I E Q DK+ QLNA A+ E
Sbjct: 109 ILCPKAKRTSRFLSGIINFIHFREACRETYMEFLWQYKSSADKMQQLNA---AHQEALMK 165
Query: 157 --RERELPL-----VQEVDAKVKELRQTI-QDLNKHQVSLRTTLNKLKEKTGALDEKFSQ 208
R +P+ +++ ++EL+Q++ QD ++ + L+ ++ K ++ ++
Sbjct: 166 LERLDSVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTIVLQEGNSQKKSNISEKTKRLNE 225
Query: 209 TEFDLVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAMQSFQ-------- 260
+ +V + L++KIV SPEKL+ E+ K ++ ++A + ++ ++
Sbjct: 226 LKLSVVSLKEIQESLKTKIVDSPEKLKNYKEKMKDTVQKLKNARQEVVEKYEIYGDSVDC 285
Query: 261 EKTTTLEV--YQKTLKKMSKQSAQMQAIL-EQVNSAKSIEKDYKSLK 304
+ LEV YQK ++ +S ++ +IL E +N IE D LK
Sbjct: 286 LPSCQLEVQLYQKKIQDLSDNREKLASILKESLNLEDQIESDESELK 332
>sp|Q7ZW63|NUF2_DANRE Kinetochore protein Nuf2 OS=Danio rerio GN=nuf2 PE=2 SV=1
Length = 454
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 207/469 (44%), Gaps = 74/469 (15%)
Query: 1 MSKFDYPRLSATEIVT-----ILTETEIAVITENDL-KNPNPDFVSDLYTRLLIFLDVLH 54
MS+ +P IV +LT E T+NDL P P+ V LY R+L L
Sbjct: 1 MSENTFPVYKVDVIVQFYRTEVLTGQESKHFTKNDLTPTPKPESVQRLYMRILQLLFRFR 60
Query: 55 EDDQGQLDFAALEQLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMNFTLKDLIRPDATRT 114
+ + + E ++ P L+ IM +Y + + + +F+L DL+ P RT
Sbjct: 61 PECHYTVPLS--ENIQYPMLYESFAPIMSVYMRMCQFLPVCRV-YDFSLSDLLNPKTKRT 117
Query: 115 EDTKMNLLRPIAEDLTRLDEQRSELE-----------DKISQLNAEIAAYNEVRERELPL 163
+ +L I ++ +QR E+ D++ EI + E+ +
Sbjct: 118 ----ITILSAI-QNFLHFRKQRLEITAAHQQSFRADMDRLQAYTREIKEAEKKIEKLTTI 172
Query: 164 VQEVDAKVKELRQTIQDLN---KHQVSLRTTLN----KLKEKTGALDEKFSQTEFDLVQS 216
E A+ KEL + +L+ +H+ + +N + K + L +K +Q + ++
Sbjct: 173 PPEQQAEAKELASALAELSTNTQHEYQDVSAINEKVAQFKTEIAELSQKLTQRKVEVATL 232
Query: 217 VQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLA----------MQSFQEKTTTL 266
+ + L+S+IV+SPE+L+ +E + + + +++LA +Q + +
Sbjct: 233 KDEISKLKSQIVESPEELKNEMERMRETAKNIKMSKELADERLVELQMLVQCASQVEAEI 292
Query: 267 EVYQKTLKKMSKQSAQMQAILEQVNSAK----SIEKDYKSLKARLNDDVVLDKSLEAKLI 322
++ K L+ + ++ + E+V S + S++K+ KSL + ++ L ++L KL
Sbjct: 293 QILLKQLQDLQSSMSKTKQRKEEVQSLEVMNESLQKELKSLSS---EEAQLKRALTMKLD 349
Query: 323 ERQGKVEQLDELQQQLEKERNLKSEDATRAFENVKLE---MESKRQDLEARQKKVEAVVT 379
+ E +QQ+ +++ K E + +N+ + M KRQ++ KK+E
Sbjct: 350 K---------ESKQQIRRQK--KKEVKDQQVKNIYGQYDKMHQKRQEI---VKKIEECNR 395
Query: 380 EVDAITSKTKFVKESGAAKLQELASKAEEIVEK----FQQYTNSIGTLL 424
E K + ++E+ + Q KA+EI E+ +QY I +L
Sbjct: 396 ETKQFKEKMQALRENCNQRTQ----KAQEIYERLLTTLEQYHKRIEKIL 440
>sp|Q6AYL9|NUF2_RAT Kinetochore protein Nuf2 OS=Rattus norvegicus GN=Nuf2 PE=2 SV=1
Length = 464
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 203/460 (44%), Gaps = 94/460 (20%)
Query: 1 MSKFDYPRLSATEIVT-----ILTETEIAVITEND-LKNPNPDFVSDLYTRLLIFLDVLH 54
M +PR + EIV +LT + ++++D L NP P+ + +Y R L
Sbjct: 1 METLSFPRYNIAEIVVHIRNKLLTGADGKNLSKSDFLPNPKPEVLYMIYMRAL------- 53
Query: 55 EDDQGQLDFAALEQLENPDLHVRSVQIMKLYSMVKEVVTTVN------------CPMN-F 101
QL + +LE+ ++ V I +Y + E V+ C +N F
Sbjct: 54 -----QLVYGV--RLEH--FYMMPVNIEVMYPHIMEGFLPVSNLFFHLDSFMPICRVNDF 104
Query: 102 TLKDLIRPDATRTEDTKMNLLRPIAEDLTRLDE------QRSELEDKISQL-NAEIAAYN 154
+ D++ P A RT ++ I T L++ Q DKI QL NA A
Sbjct: 105 EIADILYPKANRTSRFLSGIINFIHFRETCLEKYEEFLLQNKSSVDKIQQLSNAHQEALM 164
Query: 155 EVRERELPLVQEVDAKVKELRQTIQDLNKHQVSLRTTLNK-LKEKTGALDEKFSQTEFDL 213
++ + V+E + + K+L+ IQ+L + LN+ ++KT L E++++ + D
Sbjct: 165 KLEKLNSVPVEEQE-EFKQLKDDIQEL-------QHLLNQDFRQKTTLLQERYTKMKSDF 216
Query: 214 -------------VQSVQQNAD-LRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAMQSF 259
V S+++ D L+SKIV SPEKL+ E+ K ++ R A + M+ +
Sbjct: 217 SEKTKHVNELKLSVVSLKEVQDSLKSKIVDSPEKLKNYKEKMKDTVQKLRSAREEVMEKY 276
Query: 260 QEKTTTLEVYQKTLKKMSKQSAQMQAILEQVNS---AKSIEKDYKSLKARLNDDVVLDKS 316
++Y+ ++ + S Q++ L Q S A + EK LK LN
Sbjct: 277 -------DIYRDSVDCLP--SCQLEVQLYQKKSQDLADNREKLSSILKESLN-------- 319
Query: 317 LEAKLIERQGKVEQLDELQQQLEKERNLKSED-ATRAF------ENVKLEMESKRQDLEA 369
LE ++ ++++L + L + LK E AT F E+VK + +D
Sbjct: 320 LEGQIDSDSSELKKLKTEENSLIRLMTLKKERLATMQFKINKKQEDVKQYKRTMIEDCNK 379
Query: 370 RQKKVEAVVTEVDAITSKTKFVKESGAAKLQELASKAEEI 409
Q+K +AV +V AI +K SG +L++ A K E++
Sbjct: 380 VQEKRDAVCEQVTAINQDIHKIK-SGIQQLRD-AEKREKL 417
>sp|Q7S9H0|NUF2_NEUCR Probable kinetochore protein nuf-2 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=nuf-2 PE=3 SV=1
Length = 464
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 28/255 (10%)
Query: 8 RLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLLIFLDVLHEDDQGQLD---FA 64
RL EIV + E I T DL+ PNP V ++ F ++L + +D A
Sbjct: 32 RLPDREIVGCINELGIP-FTLADLQKPNPIQVQMIFE---WFGELLMNKTRQTVDPAMRA 87
Query: 65 ALEQLENPDLHVRSV-----QIMKLYSMVKEVVTTVNCPMN-FTLKDLIRPDA---TRTE 115
A E + P+L + ++ Y ++ ++ ++C +N F+ DL +P R
Sbjct: 88 AAEDVCGPELGEAMMPSDTRNLLGFYVSLRRLM--LDCGVNDFSFNDLYKPTHDRLVRML 145
Query: 116 DTKMNLLRPIAEDLTRLDEQRSELED---KISQLNAEI----AAYNEVRERELP---LVQ 165
+N +R + +DE ++ E +I QL E A E+R LVQ
Sbjct: 146 SYVINFVRFRESQTSVIDEHCNKAEQTKARIEQLYVENQNMEAQLEEMRHNRRAMEVLVQ 205
Query: 166 EVDAKVKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFDLVQSVQQNADLRS 225
E + +EL++ + +L + Q + L + K K G L + + + Q++A LR
Sbjct: 206 EKTVRNEELKKRLLELRRSQEKVAARLEEAKTKKGELAAELEEKTATKIALKQESAKLRP 265
Query: 226 KIVQSPEKLQRTLEE 240
++QSP LQ +L E
Sbjct: 266 YVLQSPSALQASLAE 280
>sp|Q2UEA0|NUF2_ASPOR Probable kinetochore protein nuf2 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=nuf2 PE=3 SV=1
Length = 463
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 180/402 (44%), Gaps = 77/402 (19%)
Query: 8 RLSATEIVTILTETEIAVITENDLKNPNPD---FVSDLYTRLLIFLDVLHE--------- 55
RL EI + + I T DL PNP V + + LL +++ HE
Sbjct: 33 RLPDKEIAGCINDIGIP-FTAADLIKPNPQQIQMVFEWFAELL--MNITHEAVEPAMRAA 89
Query: 56 -DDQGQLDFAALEQLENPDL-HVRSVQIMKLYSMVKEVVTTVNCPMN-FTLKDLIRPDAT 112
DD G DF PD+ + +M + +++++ + C +N FT DL +P
Sbjct: 90 ADDVGG-DF--------PDIVPTDTRNLMGFFVSLRKLM--MECGVNDFTFTDLTKPTHD 138
Query: 113 R---TEDTKMNLLRPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVRERELPLVQEV-- 167
R +N +R +DE ++ E ++++ A E+ +R + + +
Sbjct: 139 RLVKIFSYLINFVRFRESQTPVIDEHFNKSEKTKARIDTLYAENQEMEQRLEEMRRNLRA 198
Query: 168 -DAKVKE-------LRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFD-----LV 214
+A+VKE L+ + +L ++Q + TL ++K D+ QT+ + +V
Sbjct: 199 NEAQVKEKVRRNDELKARLLELRRNQERVAETLERVK-----ADKTRRQTQLEEKTEKVV 253
Query: 215 QSVQQNADLRSKIVQSPEKLQRTLEE--KKSIREEAR-DAEKLAMQSFQEKTTTLEVY-- 269
++ Q+ LR ++SP LQ +L E + +RE+A+ DA + ++ Q + T V
Sbjct: 254 RTRQEVEKLRPYAMESPVSLQASLTELSENLLREKAQIDAMEKRARALQTSSDTFTVVSN 313
Query: 270 ----------------QKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSLK---ARLNDD 310
QK + S+ S +AI E+ NS + +E+ K L+ AR N+
Sbjct: 314 DVQACVKLLEDISVELQKEEDEESRASRNKEAISERGNSVREVEQTEKLLQRQLARWNER 373
Query: 311 V-VLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSEDATR 351
+ L K+ + K Q ++E+L E+Q+QL +ER K D R
Sbjct: 374 IETLRKNAQEKAEAAQARMEELREVQKQLREERAEKQRDMER 415
>sp|Q10173|NUF2_SCHPO Kinetochore protein nuf2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=nuf2 PE=1 SV=1
Length = 441
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 206/447 (46%), Gaps = 54/447 (12%)
Query: 3 KFDYPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLL-IFLDVLHEDDQGQL 61
K +P L EI+ + I T +L P V LY L +F+ + ++ + ++
Sbjct: 4 KHTFPSLKRAEILECIDGLGIP-FTAKELDQPTSKAVIPLYEEFLDLFMGLTRQNLEEKV 62
Query: 62 DFAALEQLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMNFTLKDLIRPDATRTE------ 115
+ + + +EN ++ S++ Y ++ + + + C +FT++DL++PD R +
Sbjct: 63 N-SLQDSVENFEIIHESLRFTVFYQILSQFMQNI-CFHDFTIQDLLKPDRNRLQLILSAV 120
Query: 116 --------------DTKMNLLRPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVREREL 161
D + + E T LD QR +LE+K+ + + + E E
Sbjct: 121 INFAKLREERLQQFDDDIQKRESLLETYTLLDAQRKDLEEKV------LLSQDRKLESE- 173
Query: 162 PLVQEVDAKVKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFDLVQSVQQNA 221
++++ + + +E+ Q++ + + +RT ++++ + L ++ + + ++++
Sbjct: 174 AIIKQNEERNEEMFQSLIEDKRLCSQVRTEYDRIRMEASELKIRYHNVDSLMASTLEEIE 233
Query: 222 DLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAM----QSFQEKTTTLEVYQKTLKKMS 277
L+S IV SPEKL+ + + S+R + ++++ + + K +L++ + L
Sbjct: 234 KLQSSIVHSPEKLKGKIADT-SLRIQNDRSQQVELDKKSKILHTKLNSLQLIEGDLNACL 292
Query: 278 KQSAQMQAILEQVNSAKSIEKDYKSLKARLNDDVVLDKS-LEAKLIERQGKVEQLDELQQ 336
K + L+++ A + S L D + ++K LE + ++ ++QL Q+
Sbjct: 293 KVLEECLVELDKLEHATVL----LSTNQELCDQIEINKKKLEFR---KEQLLKQLSNAQE 345
Query: 337 QLEKE---RNLKSEDATRAFENVKLEMESKRQDLEARQKKVEAVVTEVDAITSKTKFVKE 393
+LE E RN K E A + +N++ E + Q+ R KK++ E + + + ++
Sbjct: 346 KLEHEQHSRNQKLEAAKQRMDNIREEYKVITQE---RNKKIQ----ETEKKNAMIEMTEQ 398
Query: 394 SGAAKLQELASKAEEIVEKFQQYTNSI 420
A +EL S+ I +F++ + +
Sbjct: 399 KIAGMREELESQISSITMEFEKLKSHV 425
>sp|P33895|NUF2_YEAST Kinetochore protein NUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NUF2 PE=1 SV=1
Length = 451
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 6 YPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLL-IFLDV-----LHEDDQG 59
+P L E+V L + A+ T+ ++ P D++ LY +++ F+ + L+ +Q
Sbjct: 8 FPILDLQELVICLQSCDFALATQENISRPTSDYMVTLYKQIIENFMGISVESLLNSSNQE 67
Query: 60 QLDFAALEQLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMNFTLKDLIRPDATRTEDTKM 119
D E EN ++++ ++ ++ L + + + +F + DL +P+A RT+
Sbjct: 68 TGDGHLQE--ENENIYLDTLNVLVLNKICFKFFENIGVQ-DFNMTDLYKPEAQRTQ---- 120
Query: 120 NLLRPIAEDLTRLDEQRS--------ELEDKISQLNAEIAAYNEVRERELPLVQEVDAKV 171
LL + + R E+R ++E + QL ++ YN + +++L ++VD
Sbjct: 121 RLLSAVV-NYARFREERMFDCNSFILQMESLLGQLRSKFDDYNLI-QQQLKQYEDVDGDN 178
Query: 172 KELRQTIQDLNKHQVSLRTTLNKL 195
Q +Q L + L L KL
Sbjct: 179 IPDEQELQKLEEQNKELEIQLKKL 202
>sp|Q9SN90|SMC22_ARATH Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis
thaliana GN=SMC2-2 PE=2 SV=1
Length = 1171
Score = 39.3 bits (90), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 51/278 (18%)
Query: 111 ATRTEDTKMNLLRPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVRERELPLVQEVDAK 170
A + D ++++ + +T +DEQ + + +IS+L +I A + RE + +
Sbjct: 242 AEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASM------GGE 295
Query: 171 VKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQS 230
VK L + L+ + L ++ D +Q ++NA+ K+V +
Sbjct: 296 VKALSDKVDSLSNEVTRELSKLTNME---------------DTLQGEEKNAE---KMVHN 337
Query: 231 PEKLQRTLEEKKSIREEARDAEKLAMQSFQEKTTTLEVYQKTLKKMSKQSAQMQAILEQV 290
E L++++EE+ S + + Q FQE +TTLE ++ + Q IL
Sbjct: 338 IEDLKKSVEERASALNKCDEGAAELKQKFQEFSTTLEECER----------EHQGIL--- 384
Query: 291 NSAKSIEKDYKSLKARLNDDVVLDKSLEAKLIERQGKVEQLD-ELQQQLEKERNLKSEDA 349
+ KS + K L+ +L D + + E +L + K+ + EL+++ K + + +D
Sbjct: 385 -AGKSSGDEEKCLEDQLRDAKISVGTAETELKQLNTKISHCEKELKEK--KSQLMSKQDE 441
Query: 350 TRAFENVKLEMESKRQDLEARQKKVEAVVTEVDAITSK 387
A EN +L+AR+ VE+V D++ K
Sbjct: 442 AVAVEN----------ELDARKNDVESVKRAFDSLPYK 469
>sp|Q9UZC8|RAD50_PYRAB DNA double-strand break repair Rad50 ATPase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=rad50 PE=3 SV=1
Length = 880
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 148/304 (48%), Gaps = 60/304 (19%)
Query: 34 PNPDFVSDLYTRLL---IFLDVLHEDDQGQLDFAALEQLENPDLHVRSV----QIMKLYS 86
P+ + VS R+L +FL+ ++ QGQ+D A LE E D VR + ++ Y
Sbjct: 112 PSMESVSSYIERILPYNVFLNAIY-IRQGQID-AILESDETRDKVVREILNLDKLESAYE 169
Query: 87 MVKEVVTTVNCPMNFTLKDLIRPDATRTEDTKMNLLRPIAEDLTRLDEQRSELEDKISQL 146
+K + T +N + + K I RTE+ E+L + +E EL K+S++
Sbjct: 170 NLKRIKTNINLLIE-SKKSFI----ARTENI---------EELIKANE--DELTKKLSEI 213
Query: 147 NAEIAAYNEVRERELPLVQEVDAKVKELRQTIQDLN--KHQVS-LRTTLNKLKEKTGALD 203
N EI++ +LP ++ +++++R+ +++L K ++S L+ + KLK + L+
Sbjct: 214 N-EISS-------KLPPIR---GELEKVRENVKELESIKGKISELKIQVEKLKGRKKGLE 262
Query: 204 EKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQ--------------------RTLEEKKS 243
EK Q E + + + ++L +IV+ KLQ R LE++ S
Sbjct: 263 EKIVQIERSIEEKKAKISEL-EEIVKDIPKLQEKEKEYRKLKGFRDEYESKLRRLEKELS 321
Query: 244 IREEARDAEKLAMQSFQEKTTTLEVYQKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSL 303
E A + ++ ++K E ++ L ++ K+ +++ +E++ AK ++K + L
Sbjct: 322 KWESELKAIEEVIKEGEKKKERAEEIREKLSEIEKRLEELKPYVEELEDAKQVQKQIERL 381
Query: 304 KARL 307
KARL
Sbjct: 382 KARL 385
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1
Length = 3674
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 41/227 (18%)
Query: 139 LEDKISQLNAEIAAYNEVRERELPLVQEVDA-KVKELRQTIQ-DLNKHQVSLRTTLNKLK 196
++D +S ++ ++A Y + +VDA ++ + Q IQ DL H++SL +
Sbjct: 1378 IQDSLSSIDHQLAVY---------IADKVDAAQMPQEAQKIQSDLTSHEISLEEMKKHYQ 1428
Query: 197 EKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAM 256
K A SQ E L Q Q+ ++ ++ Q P ++ L+E K I +E K+ +
Sbjct: 1429 GKEAA-PRVLSQIE--LAQKKLQDVSMKFRLFQKPANFEQRLQESKMILDEV----KMHL 1481
Query: 257 QSFQEKTTTLEVYQKTL-------KKMSKQSAQMQAIL---------EQVNSAKSIEKDY 300
+ + K+ EV Q L K +S+ ++++ ++ +Q + K +++
Sbjct: 1482 PALEIKSVEQEVVQSQLNHCVNLYKSLSEVKSEVEMVIKTGRQIVQKKQTENPKELDERV 1541
Query: 301 KSLKARLNDDVVLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSE 347
+LK N+ L AK+ ER+ ++E+ +L +++ KE N+ +E
Sbjct: 1542 TALKLHYNE-------LGAKVTERKQQLEKCLKLSRKMRKEMNVLTE 1581
>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3
Length = 3685
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 58/300 (19%)
Query: 139 LEDKISQLNAEIAAYNEVRERELPLVQEVDA-KVKELRQTIQ-DLNKHQVSLRTTLNKLK 196
+++ ++ ++ ++AAY + +VDA ++ + Q IQ DL H++SL + K
Sbjct: 1382 IQESLTFIDKQLAAY---------IADKVDAAQMPQEAQKIQSDLTSHEISLEE-MKKHN 1431
Query: 197 EKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAM 256
+ A SQ D+ Q Q+ ++ ++ Q P ++ L+E K I +E K+ +
Sbjct: 1432 QGKEAAQRVLSQ--IDVAQKKLQDVSMKFRLFQKPANFEQRLQESKMILDEV----KMHL 1485
Query: 257 QSFQEKTTTLEVYQKTL-------KKMSKQSAQMQAIL---------EQVNSAKSIEKDY 300
+ + K+ EV Q L K +S+ ++++ ++ +Q + K +++
Sbjct: 1486 PALETKSVEQEVVQSQLNHCVNLYKSLSEVKSEVEMVIKTGRQIVQKKQTENPKELDERV 1545
Query: 301 KSLKARLNDDVVLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSE--DAT-------R 351
+LK N+ L AK+ ER+ ++E+ +L +++ KE N+ +E AT
Sbjct: 1546 TALKLHYNE-------LGAKVTERKQQLEKCLKLSRKMRKEMNVLTEWLAATDMELTKRS 1598
Query: 352 AFENVKLEMESKRQDLEARQKKVEAVVTEVDAITSKTKFVKESGAAKLQELASKAEEIVE 411
A E + ++S+ +A QK++E + +IT E G A L+ + K E +VE
Sbjct: 1599 AVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSIT-------EVGEA-LKTVLGKKETLVE 1650
>sp|Q9M7J4|MFP1_TOBAC MAR-binding filament-like protein 1-1 OS=Nicotiana tabacum
GN=MFP1-1 PE=2 SV=1
Length = 722
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 123 RPIAEDLTRLDEQRSELEDKISQLNAEIA-AYNEVREREL---PLVQEVDAKVKELRQTI 178
+ +A D L EQ E ++ QL ++ A +EVR+ + L QE + + L +
Sbjct: 366 KKVASDAKLLGEQ----EKRLHQLEEQLGTASDEVRKNNVLIADLTQEKENLRRMLDAEL 421
Query: 179 QDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRTL 238
++++K ++ ++ T L EK D+ Q +QQ+ L SK+ KLQ L
Sbjct: 422 ENISKLKLEVQVTQETL--------EKSRSDASDIAQQLQQSRHLCSKLEAEVSKLQMEL 473
Query: 239 EE-----KKSIREEARDAEKLAMQSFQEKTTTLEVYQKTLKKMSKQSAQMQAILEQ---- 289
EE +++I E R AE LA E TTT E+ +KT ++M S ++ A+ E
Sbjct: 474 EETRTSLRRNIDETKRGAELLAA----ELTTTRELLKKTNEEMHTMSHELAAVTENCDNL 529
Query: 290 ----VNSAKSIEKDYKSLKARLNDDVVLDKSL 317
V+ K E+ LK N V L+K L
Sbjct: 530 QTELVDVYKKAERAADELKQEKNIVVTLEKEL 561
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 139 LEDKISQLNAEIAAYNEVRERELPLVQEVDA-KVKELRQTIQ-DLNKHQVSLRTTLNKLK 196
+++ +S ++ ++AAY + +VDA ++ + Q IQ DL H++SL K
Sbjct: 1384 IQESLSSIDKQLAAY---------IADKVDAAQMPQEAQKIQSDLTSHEISLEEMK---K 1431
Query: 197 EKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAM 256
G + ++ D+ Q Q+ ++ ++ Q P ++ L+E K I +E K+ +
Sbjct: 1432 HNQGKETAQRVLSQIDVAQKKLQDVSMKFRLFQKPANFEQRLQESKMILDEV----KMHL 1487
Query: 257 QSFQEKTTTLEVYQKTL-------KKMSKQSAQMQAIL---------EQVNSAKSIEKDY 300
+ + K+ EV Q L K +S+ ++++ ++ +Q + K +++
Sbjct: 1488 PALETKSVEQEVVQSQLNHCVNLYKSLSEVKSEVEMVIKTGRQIVQKKQTENPKELDERV 1547
Query: 301 KSLKARLNDDVVLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSE--DAT-------R 351
+LK N+ L AK+ ER+ ++E+ +L +++ KE N +E AT
Sbjct: 1548 TALKLHYNE-------LGAKVTERKQQLEKCLKLSRKMRKEMNALTEWLAATDMELTKRS 1600
Query: 352 AFENVKLEMESKRQDLEARQKKVEAVVTEVDAITSKTKFVKESGAAKLQELASKAEEIVE 411
A E + ++S+ +A QK++E + ++T E G A L+ + K E +VE
Sbjct: 1601 AVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSVT-------EVGEA-LKTVLGKKEMLVE 1652
>sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle OS=Drosophila melanogaster GN=zip PE=1
SV=2
Length = 2057
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 136/262 (51%), Gaps = 23/262 (8%)
Query: 130 TRLDEQRSELEDKISQLNAEIAAYNEVRERELPLVQEVDAKVKELRQTIQDLNKHQVSLR 189
T L++ + LE + + L E+ + N R+ ++ ++++ EL+ + ++ + + L+
Sbjct: 1304 TVLEKAKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIERARSELQ 1363
Query: 190 TTLNKLKEKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEAR 249
KL+++ + + + E +V+ +++ S++ ++ + L+ +K + + R
Sbjct: 1364 EKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETRQKLGLSSKLR 1423
Query: 250 --DAEKLAMQ-SFQEKTTTLEVYQKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSLKAR 306
++EK A+Q +E Y++ K+++ + QMQ I ++ + K+ + K R
Sbjct: 1424 QIESEKEALQEQLEEDDEAKRNYER---KLAEVTTQMQEIKKKAEEDADLAKELEEGKKR 1480
Query: 307 LNDDVVLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSEDATRAFENVKLEMESKRQ- 365
LN D+ ++LE ++ E + ++LD+ +++++ E EDAT +E+E++R
Sbjct: 1481 LNKDI---EALERQVKELIAQNDRLDKSKKKIQSE----LEDAT-------IELEAQRTK 1526
Query: 366 --DLEARQKKVEAVVTEVDAIT 385
+LE +QK + ++ E AI+
Sbjct: 1527 VLELEKKQKNFDKILAEEKAIS 1548
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3
Length = 3678
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 146 LNAEIAAYNEVRERELPLVQEVDA-KVKELRQTIQ-DLNKHQVSLRTTLNKLKEKTGALD 203
++ ++AAY + +VDA ++ + Q IQ DL H++SL + K + A
Sbjct: 1391 IDKQLAAY---------ITDKVDAAQMPQEAQKIQSDLTSHEISLEE-MKKHNQGKDANQ 1440
Query: 204 EKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLAMQSFQEKT 263
SQ D+ Q Q+ ++ ++ Q P ++ LEE K I +E K+ + + + K+
Sbjct: 1441 RVLSQ--IDVAQKKLQDVSMKFRLFQKPANFEQRLEESKMILDEV----KMHLPALETKS 1494
Query: 264 TTLEVYQKTL-------KKMSKQSAQMQAIL---------EQVNSAKSIEKDYKSLKARL 307
EV Q L K +S+ ++++ ++ +Q + K +++ +LK
Sbjct: 1495 VEQEVIQSQLSHCVNLYKSLSEVKSEVEMVIKTGRQIVQKKQTENPKELDERVTALKLHY 1554
Query: 308 NDDVVLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSE 347
N+ L AK+ ER+ ++E+ +L +++ KE N+ +E
Sbjct: 1555 NE-------LGAKVTERKQQLEKCLKLSRKMRKEMNVLTE 1587
>sp|Q5BH14|NUF2_EMENI Probable kinetochore protein nuf2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nuf2 PE=3 SV=2
Length = 463
Score = 35.0 bits (79), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 186/428 (43%), Gaps = 72/428 (16%)
Query: 8 RLSATEIVTILTETEIAVITENDLKNPNPD---FVSDLYTRLLIFLDVLHEDDQGQLDFA 64
RL EI + + I T DL PNP V + + LL ++ E + + A
Sbjct: 33 RLPDKEIAGCINDIGIP-FTAADLIKPNPQQVQMVLEWFAELL--MNTTRETVEPAMRAA 89
Query: 65 ALEQLEN-PDL-HVRSVQIMKLYSMVKEVVTTVNCPMN-FTLKDLIRPDATR---TEDTK 118
A + + PD+ + +M + ++ ++ C +N FT DL +P R
Sbjct: 90 ADDICGDFPDIVPTDTRNLMGFFVNMRRLM--AECGVNDFTFTDLTKPTHDRLVKIFSYL 147
Query: 119 MNLLRPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVRER--ELPLV-----QEVDAKV 171
+N +R +DE ++ E ++ E+ +R E+ V EV KV
Sbjct: 148 INFVRFRESQTAVIDEHFNKTEKTKQRIETLYTENQEMEQRLEEMRRVLKANEAEVKEKV 207
Query: 172 K---ELRQTIQDLNKHQVSLRTTLNKLK----EKTGALDEKFSQTEFDLVQSVQQNADLR 224
+ EL+ +++L + Q + TL ++K + L EK +T V++ Q+ LR
Sbjct: 208 RRNDELKSRLRELGRTQEKVAETLERVKAEKARQQNLLKEKMERT----VRTRQEVEKLR 263
Query: 225 SKIVQSPEKLQRTLEE--KKSIREEAR-DAEKLAMQSFQEKTTTLEVY------------ 269
+++SP LQ +L E + +RE+ + DA + ++ Q + T V
Sbjct: 264 PYVMESPASLQSSLTELSESLLREKNQIDAMEKRARALQTSSDTFTVVSNDVQACIKLLE 323
Query: 270 ------QKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSLK---ARLNDDV-VLDKSLEA 319
QK + S+ S +AI E+ N+ + +E+ K L+ AR N+ + L +
Sbjct: 324 DIAVELQKEEDEESRASRNKEAISERGNNVREVEQTEKLLQRQLARWNERIEALRNTAHE 383
Query: 320 KLIERQGKVEQLDELQQQLEKERNLKSEDATRAFENVKLEMESKRQDLEARQKKV----E 375
K Q ++E+L E+Q +L +ER K D ME +R +E +KK+ E
Sbjct: 384 KAQVAQKRMEELREVQIKLREERTEKQRD-----------MERRRIRIEQTEKKMADLKE 432
Query: 376 AVVTEVDA 383
++ TE+ +
Sbjct: 433 SIETEIQS 440
>sp|Q4WVA0|NUF2_ASPFU Probable kinetochore protein nuf2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=nuf2
PE=3 SV=3
Length = 463
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 177/407 (43%), Gaps = 87/407 (21%)
Query: 8 RLSATEIVTILTETEIAVITENDLKNPNPD---FVSDLYTRLLI---------FLDVLHE 55
RL EI + + I T DL PNP V + + LL+ + E
Sbjct: 33 RLPDKEIAGCINDIGIP-FTAADLIKPNPQQIQMVFEWFAELLMNTTKETVEPAMRAAAE 91
Query: 56 DDQGQLDFAALEQLENPDLHVRSVQIMKLYSMVKEVVTTVNCPMN-FTLKDLIRPDATR- 113
D G D+ + LE +L M + ++ ++ + C +N FT DL +P R
Sbjct: 92 DICG--DYPDIVPLETRNL-------MGFFISLRRLM--MECGVNDFTFTDLTKPTHDRL 140
Query: 114 --TEDTKMNLLR-------PIAEDLTRLDEQRS----------ELEDKISQLNAEIAAYN 154
+N +R I E + ++ ++ E+E ++ ++ + A N
Sbjct: 141 VKIFSYLINFVRFRESQTQVIDEHFNKTEKTKARIDTLFMENQEMEQRLEEMRRSLKA-N 199
Query: 155 EVRERE-LPLVQEVDAKVKELRQTIQDLNKHQVSLRTTLNKLK----EKTGALDEKFSQT 209
E + +E + E+ A++ ELR ++Q + TL ++K + L+EK ++
Sbjct: 200 EAQVKEKVRRNDELKARLLELR-------RNQERIAETLERVKADKARRQAQLEEKTERS 252
Query: 210 EFDLVQSVQQNADLRSKIVQSPEKLQRTLEE--KKSIREEAR-DAEKLAMQSFQEKTTTL 266
V++ Q+ LR +QSP LQ L E + +RE+A+ DA + ++ Q + T
Sbjct: 253 ----VRTRQEVEKLRPYAMQSPVSLQSALTELSENLLREKAQIDAMEKRARALQTSSDTF 308
Query: 267 EV------------------YQKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKSLK---A 305
V QK ++ S+ S +AI E+ N+ + +E+ K L+ A
Sbjct: 309 TVVGNDVQACIKLLEDISVELQKEEEEESRASRNKEAISERGNNVREVEQTEKLLQRQLA 368
Query: 306 RLNDDV-VLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSEDATR 351
R N+ + L K+ + K Q ++++L ++Q++L +ER K D R
Sbjct: 369 RWNERIEALRKNAQEKAEVAQARMDELRDVQKKLREERAEKQRDMER 415
>sp|Q4IBX0|NUF2_GIBZE Probable kinetochore protein NUF2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=NUF2 PE=3
SV=1
Length = 462
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 173/414 (41%), Gaps = 62/414 (14%)
Query: 6 YPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRLL-IFLDVLHEDDQGQLDFA 64
+ RL EIV +T+ I T DL+ PN V ++ + L+ E + + A
Sbjct: 29 FMRLPDREIVGCITDIGI-TFTVADLQKPNAAHVQQIFEWFAELLLNATRETVEPAMRAA 87
Query: 65 ALE-QLENPDLHVRSVQ-IMKLYSMVKEVVTTVNCPM-NFTLKDLIRPDATR---TEDTK 118
A + E D+ + +M Y ++ ++ C + +F+ DL +P R
Sbjct: 88 AEDIAGEYADIIPSDTRNLMGFYVSLRRLL--FECGITDFSFNDLYKPTYDRLVKIFSYL 145
Query: 119 MNLLRPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVRERELPL-------------VQ 165
+N +R +D+ ++ E +++ Y E +E E L VQ
Sbjct: 146 INFVRFRESQTAVIDQHYNKAESTKTRIET---LYGENQENEGRLEDMKRNRKAMEAQVQ 202
Query: 166 EVDAKVKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFDLVQSVQQNADLRS 225
+ + +EL++ + +L ++Q + L + K+K G L Q + V Q++ LR
Sbjct: 203 QKTMRNEELKKRLLELRRNQERVAARLEEAKQKKGELTTALEQKTHEKVTLKQESTKLRP 262
Query: 226 KIVQSPEKLQRTLEEKKSIRE------EARDAEKLAMQ----SFQEKTTTLEVYQKTLKK 275
++QS LQ L E + I +A D A+Q SF +T + K L +
Sbjct: 263 YVLQSASDLQENLAELRDILNNDKSHIDALDRRARALQTSTDSFSVVSTDVASCIKILDE 322
Query: 276 MS-----------KQSAQMQAILEQVNSAKSIEKDYKSLKARLNDDVVLDKSLE----AK 320
++ + + Q A+ E+ N+A+ +E+ LK +L+ + + L K
Sbjct: 323 IASELAKEEEELARNAKQRDALSERSNNAREVERTETMLKRQLSKWMERTEKLREQSNHK 382
Query: 321 LIERQGKVEQLDELQQQLEKERNLKSEDATRAFENVKLEMESKRQDLEARQKKV 374
E + K+ +L + +QL +E K + EME +R +E +KK+
Sbjct: 383 AHEAKEKMHELRAIHRQLTEEHTEKGK-----------EMEVRRVRIEQTEKKM 425
>sp|Q9YFZ1|RAD50_AERPE DNA double-strand break repair Rad50 ATPase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=rad50 PE=3 SV=1
Length = 919
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 42/230 (18%)
Query: 178 IQDLNKHQVSLRTTLNKLKEKTGALDEKFSQTEFDLVQSVQQNADLRSKIVQSPEKLQRT 237
+QD + L + LN+L+E L E QT DL ++ Q+ LR ++ + KL+ +
Sbjct: 511 LQDKRRRIELLLSRLNQLEE---GLRELGFQTPEDLAKAEQKLRMLRERL-EELRKLENS 566
Query: 238 LEEKKSIREEARDAEKLAMQSFQEKTTTLEVYQK----------TLKKMSKQSAQMQAIL 287
LEEK +R +R E++A++ + KT LEV Q+ LK +S +S +++ +L
Sbjct: 567 LEEK--VRNLSR--EEVALR--EAKTRALEVLQRLGIKEEEAREKLKTLSSESKKLERML 620
Query: 288 EQVNSAKSIEKDYKSLKARLNDDVVLDKSLEAKLIERQGKVEQLDELQQQLEKERNLKSE 347
V+ A+ + R DD+ L+K+ EA +G ++L ++++LE+ R LK E
Sbjct: 621 --VSKAEDLATRLGITAYRSLDDL-LEKAREAL----EGVDKELSAIERRLEEARRLKEE 673
Query: 348 DATRAFENVKLEME---------------SKRQDLEARQKKVEAVVTEVD 382
A +E ++ S++ ++EAR K+V+ + E+D
Sbjct: 674 AAKLKWEAEQVMKRLEELEAEEKKLRKEVSRKSEIEARLKEVQNTLAELD 723
>sp|Q76I90|NUF2_CHICK Kinetochore protein Nuf2 OS=Gallus gallus GN=NUF2 PE=1 SV=1
Length = 469
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 155/379 (40%), Gaps = 90/379 (23%)
Query: 1 MSKFDYPRLSATEIVTILTETEIAVITENDLKNPNPDFVSDLYTRL------LIFLDVLH 54
M +PR S +IV L V+ + +N +DL+ L +IF+ +L
Sbjct: 1 MEALTFPRYSPDDIVAYLRS---HVLVGAEARNLTK---ADLFATLKPEVLHMIFIRILQ 54
Query: 55 EDDQGQLDFAALEQLE----NPDLHVRSVQIMKLYSMVKEVVTTVNCPMN-FTLKDLIRP 109
+ +L+ + + P + + + LY ++ + C +N F + D+I P
Sbjct: 55 KVYGIRLEHFYMMPVNVDIVYPQIFEGFLPVCNLYIHMERFLPV--CRVNDFQMSDVINP 112
Query: 110 DATRTEDTKMNLL--------------------RPIAEDLTRLDEQRSELEDKISQLNAE 149
A RT +L + E +L+ ELE K+ +LN
Sbjct: 113 KAKRTARFLSGILNFVHFRECRREAYLELQLNYKSAMEKHQQLETANQELEMKLEKLNT- 171
Query: 150 IAAYNEVRERELPLVQEVDAKVKELRQTIQDLNKHQVSLRTTLNKLKEKTGALDEKFSQT 209
+P+ Q+ A+ K+L IQ+L + + + KT AL E SQ
Sbjct: 172 -----------VPVEQQ--AEFKQLSDDIQELEQ------LLSHDYRRKTAALQEVISQK 212
Query: 210 EFDLVQSV--------------QQNADLRSKIVQSPEKLQRTLEEKKSIREEARDAEKLA 255
+ D+ + ++ L+SKIV+SPE+L+ E K ++ + +++
Sbjct: 213 KSDITERTRKLNELKVTMATLKEEQEQLKSKIVESPEELKNYKELMKETVKKLKKSKQEV 272
Query: 256 MQSFQEKTTTLEV----------YQKTLKKMSKQSAQMQAILEQVNSAKSIEKDYKS--- 302
++ ++ +EV YQ KKM +Q+A ++ + ++ +++E +S
Sbjct: 273 IEKYEGYRDLVEVLPSCQLEVQLYQ---KKMERQAANVERLASVLSEVRNLEDQLESAQI 329
Query: 303 -LKARLNDDVVLDKSLEAK 320
LK D++ L + + AK
Sbjct: 330 ELKKGKTDEMSLKRLVTAK 348
>sp|P35579|MYH9_HUMAN Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4
Length = 1960
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 123 RPIAEDLTRLDEQRSELEDKISQLNAEIAAYNEVRERELPLVQEVDA-------KVKELR 175
R + D T L +Q +EL+ +I++L ++A E + L V+E A K++EL
Sbjct: 1051 RKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELE 1110
Query: 176 QTIQDLNKHQVSLRTTLNKLKEKTGALDEKFS--QTEF-DLVQSVQQNADLRSKIVQSPE 232
I +L + S R + NK +++ L E+ +TE D + S +LRSK Q
Sbjct: 1111 SQISELQEDLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVN 1170
Query: 233 KLQRTLEEKKSIRE 246
L++TLEE+ E
Sbjct: 1171 ILKKTLEEEAKTHE 1184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,009,363
Number of Sequences: 539616
Number of extensions: 5293419
Number of successful extensions: 47901
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 3683
Number of HSP's that attempted gapping in prelim test: 33963
Number of HSP's gapped (non-prelim): 10946
length of query: 432
length of database: 191,569,459
effective HSP length: 120
effective length of query: 312
effective length of database: 126,815,539
effective search space: 39566448168
effective search space used: 39566448168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)