Query 014020
Match_columns 432
No_of_seqs 146 out of 732
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 04:03:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 3E-113 9E-118 895.0 36.0 370 38-421 16-394 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 1E-108 4E-113 854.7 36.3 362 41-421 4-370 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 9E-106 3E-110 842.5 38.3 378 35-422 19-403 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 2.9E-95 1E-99 758.9 38.4 370 37-418 6-382 (451)
5 1cza_N Hexokinase type I; stru 100.0 2.2E-89 7.5E-94 766.6 39.7 366 41-420 468-840 (917)
6 2yhx_A Hexokinase B; transfera 100.0 1.5E-88 5.2E-93 709.1 33.7 367 40-421 6-376 (457)
7 1cza_N Hexokinase type I; stru 100.0 4.3E-75 1.5E-79 651.2 34.5 369 39-421 18-393 (917)
8 1z6r_A MLC protein; transcript 98.7 3.2E-07 1.1E-11 93.0 18.0 189 45-264 35-231 (406)
9 1z05_A Transcriptional regulat 98.7 3.7E-07 1.3E-11 93.5 18.3 184 46-264 59-253 (429)
10 2hoe_A N-acetylglucosamine kin 98.6 1.2E-06 4.2E-11 88.3 17.2 187 45-264 38-231 (380)
11 2qm1_A Glucokinase; alpha-beta 98.6 1.2E-06 4.2E-11 85.5 16.5 141 97-264 6-153 (326)
12 2ap1_A Putative regulator prot 98.3 5E-06 1.7E-10 81.6 13.9 136 97-264 24-165 (327)
13 2ch5_A NAGK protein; transfera 98.3 2.3E-06 7.9E-11 84.3 10.7 131 98-263 7-138 (347)
14 4db3_A Glcnac kinase, N-acetyl 98.2 2.1E-05 7.1E-10 77.8 14.5 135 98-264 25-165 (327)
15 2yhw_A Bifunctional UDP-N-acet 98.1 2.8E-05 9.5E-10 76.9 13.2 142 96-264 29-176 (343)
16 3vgl_A Glucokinase; ROK family 98.1 2.1E-05 7.2E-10 77.3 11.4 133 98-264 3-141 (321)
17 1woq_A Inorganic polyphosphate 98.0 0.00012 4E-09 70.0 15.7 148 93-264 8-160 (267)
18 1zbs_A Hypothetical protein PG 98.0 4.5E-05 1.5E-09 73.9 12.1 124 99-263 2-126 (291)
19 3r8e_A Hypothetical sugar kina 98.0 3.9E-05 1.3E-09 75.4 11.2 181 95-331 17-203 (321)
20 3mcp_A Glucokinase; structural 98.0 5.3E-05 1.8E-09 76.8 12.5 137 95-264 7-166 (366)
21 3vov_A Glucokinase, hexokinase 98.0 8.5E-05 2.9E-09 72.5 13.6 135 99-264 3-143 (302)
22 1zxo_A Conserved hypothetical 97.9 9.9E-06 3.4E-10 78.6 6.7 122 99-263 2-124 (291)
23 2aa4_A Mannac kinase, putative 97.9 9.7E-05 3.3E-09 70.9 12.1 134 99-264 3-140 (289)
24 3htv_A D-allose kinase, alloki 97.9 3.4E-05 1.2E-09 75.8 8.9 142 95-264 5-151 (310)
25 4htl_A Beta-glucoside kinase; 97.8 0.00017 6E-09 70.0 12.9 132 98-264 5-142 (297)
26 3epq_A Putative fructokinase; 97.7 0.00035 1.2E-08 68.4 12.8 133 98-264 4-142 (302)
27 1zc6_A Probable N-acetylglucos 97.6 0.00078 2.7E-08 65.4 13.9 124 98-263 12-139 (305)
28 2q2r_A Glucokinase 1, putative 97.5 0.00034 1.2E-08 70.1 10.2 190 97-331 29-256 (373)
29 2gup_A ROK family protein; sug 97.5 0.00045 1.5E-08 66.4 10.3 129 98-264 5-137 (292)
30 2e2o_A Hexokinase; acetate and 97.3 0.00048 1.6E-08 66.4 7.9 116 98-257 3-118 (299)
31 1sz2_A Glucokinase, glucose ki 97.0 0.0045 1.5E-07 60.9 11.6 183 96-331 13-212 (332)
32 1saz_A Probable butyrate kinas 96.5 0.0031 1.1E-07 63.6 6.8 145 98-264 3-194 (381)
33 3lm2_A Putative kinase; struct 96.3 0.024 8.2E-07 53.5 10.9 124 95-263 4-129 (226)
34 2p3r_A Glycerol kinase; glycer 94.1 0.14 4.7E-06 53.5 8.9 64 95-161 1-67 (510)
35 3ifr_A Carbohydrate kinase, FG 93.7 0.13 4.3E-06 53.8 7.8 63 96-161 6-71 (508)
36 3h3n_X Glycerol kinase; ATP-bi 93.4 0.19 6.5E-06 52.4 8.6 61 98-161 6-69 (506)
37 3g25_A Glycerol kinase; IDP007 93.4 0.22 7.6E-06 51.7 9.0 61 98-161 7-70 (501)
38 4e1j_A Glycerol kinase; struct 93.2 0.18 6.3E-06 52.7 8.1 61 98-161 27-90 (520)
39 2dpn_A Glycerol kinase; thermu 93.0 0.25 8.5E-06 51.2 8.8 61 98-161 3-66 (495)
40 2itm_A Xylulose kinase, xylulo 93.0 0.22 7.4E-06 51.4 8.2 59 99-160 2-63 (484)
41 3hz6_A Xylulokinase; xylulose, 92.7 0.2 6.9E-06 52.2 7.5 57 98-157 6-65 (511)
42 2zf5_O Glycerol kinase; hypert 92.5 0.32 1.1E-05 50.4 8.7 61 98-161 4-67 (497)
43 3ezw_A Glycerol kinase; glycer 92.5 0.24 8.4E-06 51.8 7.9 66 94-162 1-69 (526)
44 2d4w_A Glycerol kinase; alpha 92.4 0.32 1.1E-05 50.5 8.7 61 98-161 3-66 (504)
45 2w40_A Glycerol kinase, putati 92.4 0.34 1.2E-05 50.3 8.8 60 98-160 5-67 (503)
46 3l0q_A Xylulose kinase; xlylul 92.3 0.21 7.1E-06 52.6 7.1 61 98-161 6-69 (554)
47 3ll3_A Gluconate kinase; xylul 91.9 0.29 9.8E-06 51.0 7.5 59 98-159 5-66 (504)
48 3jvp_A Ribulokinase; PSI-II, N 91.6 0.31 1.1E-05 51.6 7.4 61 98-161 6-81 (572)
49 2uyt_A Rhamnulokinase; rhamnos 87.8 2 6.9E-05 44.1 9.8 79 98-184 5-91 (489)
50 3h6e_A Carbohydrate kinase, FG 85.9 0.87 3E-05 47.3 5.8 57 98-157 7-65 (482)
51 3bex_A Type III pantothenate k 82.2 2.9 9.8E-05 39.6 7.2 44 99-151 5-48 (249)
52 3i8b_A Xylulose kinase; strain 82.2 2.3 7.8E-05 44.4 7.1 52 98-155 6-58 (515)
53 4gni_A Putative heat shock pro 73.5 25 0.00086 34.6 11.5 51 210-262 166-221 (409)
54 3h1q_A Ethanolamine utilizatio 71.2 62 0.0021 29.6 14.1 29 212-242 110-138 (272)
55 3djc_A Type III pantothenate k 70.8 5.4 0.00019 38.2 5.7 49 99-161 4-52 (266)
56 3i33_A Heat shock-related 70 k 69.9 36 0.0012 33.3 11.6 51 210-262 174-230 (404)
57 3qfu_A 78 kDa glucose-regulate 68.4 43 0.0015 32.4 11.8 48 210-259 169-219 (394)
58 4ehu_A Activator of 2-hydroxyi 61.8 40 0.0014 31.2 9.7 36 228-263 75-111 (276)
59 2v7y_A Chaperone protein DNAK; 46.7 1.1E+02 0.0038 31.3 10.9 46 211-258 126-173 (509)
60 3mdq_A Exopolyphosphatase; str 46.7 58 0.002 31.5 8.3 62 98-159 5-68 (315)
61 2fsj_A Hypothetical protein TA 46.2 35 0.0012 33.3 6.7 52 95-155 188-239 (346)
62 4bc3_A Xylulose kinase; transf 45.1 32 0.0011 35.7 6.5 21 98-118 11-31 (538)
63 2h3g_X Biosynthetic protein; p 44.6 52 0.0018 31.2 7.5 44 99-151 2-45 (268)
64 3hi0_A Putative exopolyphospha 41.3 53 0.0018 34.1 7.5 76 82-159 2-79 (508)
65 2kho_A Heat shock protein 70; 38.0 1.5E+02 0.0051 31.2 10.4 127 97-256 2-196 (605)
66 4b9q_A Chaperone protein DNAK; 37.9 26 0.00089 37.1 4.5 52 211-264 152-206 (605)
67 1hux_A Activator of (R)-2-hydr 37.1 22 0.00075 33.5 3.4 33 228-260 78-110 (270)
68 1t6c_A Exopolyphosphatase; alp 35.0 79 0.0027 30.6 7.2 62 98-159 13-76 (315)
69 2ych_A Competence protein PILM 31.3 67 0.0023 31.0 6.0 33 207-241 150-182 (377)
70 4a2a_A Cell division protein F 31.1 4.1E+02 0.014 26.5 13.3 52 208-261 168-221 (419)
71 1mul_A NS2, HU-2, DNA binding 30.0 80 0.0027 24.6 5.2 36 40-75 4-39 (90)
72 2o97_B NS1, HU-1, DNA-binding 28.4 84 0.0029 24.5 5.1 36 40-75 4-39 (90)
73 1p71_A DNA-binding protein HU; 28.2 82 0.0028 24.8 5.0 36 40-75 4-39 (94)
74 1b8z_A Protein (histonelike pr 28.1 84 0.0029 24.4 5.0 36 40-75 4-39 (90)
75 1u6z_A Exopolyphosphatase; alp 27.7 1.3E+02 0.0045 31.1 7.7 63 98-160 12-76 (513)
76 3rhi_A DNA-binding protein HU; 27.3 82 0.0028 24.8 4.8 35 41-75 8-42 (93)
77 3c4i_A DNA-binding protein HU 26.1 93 0.0032 24.8 5.0 35 41-75 5-39 (99)
78 1owf_A IHF-alpha, integration 25.0 1E+02 0.0035 24.5 5.0 36 40-75 6-41 (99)
79 3nuw_A 2-OXO-3-deoxygalactonat 22.4 73 0.0025 31.0 4.3 18 98-115 7-24 (295)
80 3cer_A Possible exopolyphospha 22.2 1.5E+02 0.0052 29.0 6.6 63 98-160 17-82 (343)
81 1owf_B IHF-beta, integration H 21.1 1.4E+02 0.0049 23.3 5.1 36 40-75 4-40 (94)
82 3tai_A DNA double-strand break 20.7 90 0.0031 32.2 4.6 49 51-103 23-71 (471)
83 3t69_A Putative 2-dehydro-3-de 20.0 94 0.0032 30.7 4.6 53 98-157 8-60 (330)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=2.7e-113 Score=895.03 Aligned_cols=370 Identities=34% Similarity=0.555 Sum_probs=341.4
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCCccccEEEEeeCCceeEEEEEE
Q 014020 38 RVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEG--GSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQ 115 (432)
Q Consensus 38 ~~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~--~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~ 115 (432)
+..+.++++.+.|.++.++|++|+++|++||++||++++ +|+++||||||+++|+|+|+|+|||||||||||||++|+
T Consensus 16 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 16 MKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEE
Confidence 455666777777889999999999999999999998763 488999999999999999999999999999999999999
Q ss_pred EcCCc--ceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEE
Q 014020 116 LGGQR--SSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILI 193 (432)
Q Consensus 116 L~g~~--~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li 193 (432)
|.+++ .+..++.+++|+||+++|.+++++||||||+||++|+++++. .++++||||||||||+|+++++|+|+
T Consensus 96 L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~-----~~~~lpLGfTFSFP~~Q~sl~~g~Li 170 (470)
T 3f9m_A 96 VGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQM-----KHKKLPLGFTFSFPVRHEDIDKGILL 170 (470)
T ss_dssp EEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTC-----SSSCCEEEEEECSCEEEEETTEEEEC
T ss_pred ECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhccc-----cccccceEEEEeccccccCCCceEEE
Confidence 97654 335556667899999999999999999999999999998764 24679999999999999999999999
Q ss_pred eeccceecCCCCCCcHHHHHHHHHHHcC-CCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCccccc
Q 014020 194 KWTKGFAIESMVGQEVTESLQRALDKRG-LDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQ 272 (432)
Q Consensus 194 ~wtKgF~~~~~~G~dv~~lL~~al~r~~-l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~ 272 (432)
+|||||++++++|+||+++|++||+|+| ++++|+||||||||||||++|.+++|.||+|+|||||+||+|++++|+|++
T Consensus 171 ~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~ 250 (470)
T 3f9m_A 171 NWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVE 250 (470)
T ss_dssp CCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeecccccccc
Confidence 9999999999999999999999999998 799999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEEcccCCcCCCC---CCCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCC-CCcc
Q 014020 273 GLLTTSGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASS 348 (432)
Q Consensus 273 ~~~~~~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~-~~~~ 348 (432)
+ ..++||||||||+||+++ +|+|+||+++|++|+|||+|+|||||||||||||+|+||++|++++.||+ ..|+
T Consensus 251 ~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~ 327 (470)
T 3f9m_A 251 G---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASE 327 (470)
T ss_dssp C---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCT
T ss_pred C---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcH
Confidence 6 467899999999999765 57999999999999999999999999999999999999999999999998 8889
Q ss_pred ccccCCccCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHhhhH
Q 014020 349 RLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLFCLL 421 (432)
Q Consensus 349 ~l~~~~~l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~~~~ 421 (432)
+|.+||+|+|++||.|++|++++ +.++.+|++ ++++ ++.+|+++||+||++|..|++ ||.|+....+
T Consensus 328 ~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA---~L~Aa~iaai 394 (470)
T 3f9m_A 328 QLRTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAA---HMCSAGLAGV 394 (470)
T ss_dssp TTTSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HhcCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99999999999999999999998 999999987 9996 677999999999999999888 8888776544
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-108 Score=854.75 Aligned_cols=362 Identities=37% Similarity=0.586 Sum_probs=334.6
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCccccEEEEeeCCceeEEEEEEEcCCc
Q 014020 41 GVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQR 120 (432)
Q Consensus 41 ~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g~~ 120 (432)
+.++++.+.|.++.++|++|+++|++||++||++++ |+++||||||+++|+|+|+|+|||||||||||||++|+|.++
T Consensus 4 ~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~- 81 (445)
T 3hm8_A 4 RLLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG- 81 (445)
T ss_dssp HHHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc-
Confidence 345566666779999999999999999999999765 889999999999999999999999999999999999999664
Q ss_pred ceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEeecccee
Q 014020 121 SSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGFA 200 (432)
Q Consensus 121 ~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~wtKgF~ 200 (432)
....+++|+||+++|.+++++||||||+||++|+++++. .++++||||||||||+|+++++|+|++|||||+
T Consensus 82 ---~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~-----~~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~ 153 (445)
T 3hm8_A 82 ---VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGL-----SGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFK 153 (445)
T ss_dssp ---EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTC-----TTCCCCEEEEECSCEECSSTTCCEECCCCTTCC
T ss_pred ---eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCc-----ccccCcceEEEeeeeEeccCCceEEEEeecccc
Confidence 334456799999999999999999999999999998764 246799999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCcccccCCCCCCC
Q 014020 201 IESMVGQEVTESLQRALDKR-GLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSG 279 (432)
Q Consensus 201 ~~~~~G~dv~~lL~~al~r~-~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~ 279 (432)
+++++|+||+++|++|++|+ +++++|+||+|||||||++++|.+++|.||+|+|||||+||+|++++|+|+++ ..+
T Consensus 154 ~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~ 230 (445)
T 3hm8_A 154 ASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSG 230 (445)
T ss_dssp CBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSS
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCC
Confidence 99999999999999999998 58999999999999999999999999999999999999999999999999876 356
Q ss_pred cEEEEcccCCcCCCCC---CCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCC-CCccccccCCc
Q 014020 280 GMVVNMEWGNFWSSHL---PRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSRLSMAFI 355 (432)
Q Consensus 280 ~miINtEwG~fg~~~l---p~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~-~~~~~l~~~~~ 355 (432)
+||||||||+||++++ |+|+||+++|++|.|||+|+|||||||||||||+|+||++|++++.||+ ..|++|.+||+
T Consensus 231 ~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~ 310 (445)
T 3hm8_A 231 RMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDI 310 (445)
T ss_dssp EEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTC
T ss_pred cEEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCC
Confidence 8999999999998764 8999999999999999999999999999999999999999999999998 89999999999
Q ss_pred cCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHhhhH
Q 014020 356 LRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLFCLL 421 (432)
Q Consensus 356 l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~~~~ 421 (432)
|+|++||.||+|++ ++..++.+|++ +++ ++|.+|+++||+||++|+.|++ ||.|+....+
T Consensus 311 l~T~~ls~ie~D~~-~~~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA---~L~Aa~iaai 370 (445)
T 3hm8_A 311 FKTKFLSEIESDSL-ALRQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAA---QLCGAGVAAV 370 (445)
T ss_dssp SCHHHHHHHTCTTC-CHHHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred CCcHHHHHHhcCCc-hHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99999999999865 58889999987 999 6999999999999999999888 8888776544
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=9e-106 Score=842.52 Aligned_cols=378 Identities=35% Similarity=0.577 Sum_probs=349.2
Q ss_pred hHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCccccEEEEeeCCceeEEEEE
Q 014020 35 KWKRVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRV 114 (432)
Q Consensus 35 ~~~~~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V 114 (432)
-+.++.+.++++++.|.++.++|++|+++|++||++||++++ ++++||||||+++|+|+|+|.|||||+|||||||++|
T Consensus 19 ~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V 97 (485)
T 3o8m_A 19 VPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLV 97 (485)
T ss_dssp SCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEE
Confidence 345688889999999999999999999999999999998764 7899999999999999999999999999999999999
Q ss_pred EEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEe
Q 014020 115 QLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIK 194 (432)
Q Consensus 115 ~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~ 194 (432)
+|.|++. .+...++|+||++++.+++++||||||+||++|+++++... ..+.+++|||||||++|+++++|+|++
T Consensus 98 ~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li~ 172 (485)
T 3o8m_A 98 KLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQR 172 (485)
T ss_dssp EEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEECC
T ss_pred EECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEee
Confidence 9977643 22334579999999999999999999999999999986431 246799999999999999999999999
Q ss_pred eccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCcccccC-
Q 014020 195 WTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQG- 273 (432)
Q Consensus 195 wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~- 273 (432)
|||||++++++|+||+++|+++++|+|+||+|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|||+++
T Consensus 173 wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~ 252 (485)
T 3o8m_A 173 WTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGL 252 (485)
T ss_dssp CCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTT
T ss_pred ccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeecccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred ---CCCCCCcEEEEcccCCcCCC--CCCCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCC-CCc
Q 014020 274 ---LLTTSGGMVVNMEWGNFWSS--HLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PAS 347 (432)
Q Consensus 274 ---~~~~~~~miINtEwG~fg~~--~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~-~~~ 347 (432)
..+.+++||||||||+||+. .+|+|+||+++|++|.|||+|+|||||||||||||+|+||++|++++.||+ ..|
T Consensus 253 ~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~ 332 (485)
T 3o8m_A 253 LPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDI 332 (485)
T ss_dssp CCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCC
T ss_pred ccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCCc
Confidence 23456789999999999875 389999999999999999999999999999999999999999999999998 888
Q ss_pred cccccCCccCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHhhhHH
Q 014020 348 SRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLFCLLY 422 (432)
Q Consensus 348 ~~l~~~~~l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~~~~~ 422 (432)
++|.+||+|+|++||.|++|++++++.++.+|++.||++ +|.+|+++||+||++|..|++ +|.|+...-+.
T Consensus 333 ~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA---~L~Aa~iaail 403 (485)
T 3o8m_A 333 SKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAA---RLTVCGVSAIC 403 (485)
T ss_dssp GGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 999999999999999999888 88887766554
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=2.9e-95 Score=758.95 Aligned_cols=370 Identities=34% Similarity=0.559 Sum_probs=341.5
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeecccccCCCCCccccEEEEeeCCceeEEEEE
Q 014020 37 KRVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLAS--EGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRV 114 (432)
Q Consensus 37 ~~~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~--~~~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V 114 (432)
+.+.+.++++.+.|.++.++|++|+++|.+||++||++ ++.|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V 85 (451)
T 1bdg_A 6 QQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSV 85 (451)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEEE
Confidence 34667888999999999999999999999999999984 3358999999999999999999999999999999999999
Q ss_pred EEcC-CcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEE
Q 014020 115 QLGG-QRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILI 193 (432)
Q Consensus 115 ~L~g-~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li 193 (432)
++.| ++. .+...++|+||.+++.+++++||||||+||++|+++++. ..+.+++|||||||++|+++++|+|+
T Consensus 86 ~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~-----~~~~~~lG~tfsfPv~q~~~~~G~l~ 158 (451)
T 1bdg_A 86 TLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGM-----KDKKFDLGFTFSFPCVQKGLTHATLV 158 (451)
T ss_dssp EECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTC-----CSSCEEEEEEECSCEEEETTTEEEEC
T ss_pred ecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCC-----CccccceEEEEeeEeccccCCCeEEe
Confidence 9977 432 222345799999999999999999999999999998753 23569999999999999999999999
Q ss_pred eeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCcccccC
Q 014020 194 KWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQG 273 (432)
Q Consensus 194 ~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~ 273 (432)
+|||||++++++|+||+++|+++++|+|+||+|+||+|||||||++++|.+++|.||+|+|||+|+||+|+.++|+|+++
T Consensus 159 ~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~g 238 (451)
T 1bdg_A 159 RWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDG 238 (451)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGCS
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCcEEEEcccCCcCCCC---CCCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCC-CCccc
Q 014020 274 LLTTSGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSR 349 (432)
Q Consensus 274 ~~~~~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~-~~~~~ 349 (432)
. ..++|+||+|||.||+++ +|+|+||.++|..|.|||+|+||||+||+|||||+|++|+++.+++.+|. ..|++
T Consensus 239 ~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~~ 316 (451)
T 1bdg_A 239 V--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPER 316 (451)
T ss_dssp C--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCSG
T ss_pred C--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchHh
Confidence 3 457899999999999876 89999999999999999999999999999999999999999999999998 88999
Q ss_pred cccCCccCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHh
Q 014020 350 LSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLF 418 (432)
Q Consensus 350 l~~~~~l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~ 418 (432)
|.+++.|+|++||.|++|++++++.++.++++.++++.++.+|++++|++|.+|..|+. ++.|+..
T Consensus 317 l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA---~lla~~i 382 (451)
T 1bdg_A 317 LKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAA---YLAGAGI 382 (451)
T ss_dssp GGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred hcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 99999999999999999999999999999998889976799999999999999999988 5555544
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=2.2e-89 Score=766.65 Aligned_cols=366 Identities=37% Similarity=0.576 Sum_probs=333.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeecccccCCCCCccccEEEEeeCCceeEEEEEEEcC
Q 014020 41 GVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE--GGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGG 118 (432)
Q Consensus 41 ~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~--~~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g 118 (432)
+.++++.+.|.++.++|++|+++|++||++||+++ +.|+++||||||+++|+|+|+|.|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 34567777778999999999999999999999753 3588999999999999999999999999999999999999964
Q ss_pred CcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEeeccc
Q 014020 119 QRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKG 198 (432)
Q Consensus 119 ~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~wtKg 198 (432)
++.++.++.+++|+||.+++.+++++||||||+||++|+++++.. .+.+||||||||||+|+++++|.|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 433355556678999999999999999999999999999987532 356899999999999999999999999999
Q ss_pred eecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCcccccCCCCC
Q 014020 199 FAIESMVGQEVTESLQRALDKR-GLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTT 277 (432)
Q Consensus 199 F~~~~~~G~dv~~lL~~al~r~-~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~ 277 (432)
|++++++|+||+++|+++++|+ +++|+++||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+++.+ .
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999875 3
Q ss_pred CCcEEEEcccCCcCCCC---CCCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCC-CCccccccC
Q 014020 278 SGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSRLSMA 353 (432)
Q Consensus 278 ~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~-~~~~~l~~~ 353 (432)
.++|+||||||+||+++ +|+|+||+++|+.|.|||+|+||||+||+|||||+|++|+++.+++.+|. ..|++|.++
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~ 779 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTR 779 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTST
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccC
Confidence 56899999999999865 58999999999999999999999999999999999999999999999998 788999999
Q ss_pred CccCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHhhh
Q 014020 354 FILRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLFCL 420 (432)
Q Consensus 354 ~~l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~~~ 420 (432)
+.|+|++||.||+|++ ++..++.+++. ++++ ++.+|++++|++|++|..|++ +|.|+...-
T Consensus 780 ~~~~t~~ls~ie~d~~-~~~~~~~i~~~-~~~~-~~~~D~~~~~~ia~~v~~RaA---~l~a~~iaa 840 (917)
T 1cza_N 780 GIFETKFLSQIESDRL-ALLQVRAILQQ-LGLN-STCDDSILVKTVCGVVSRRAA---QLCGAGMAA 840 (917)
T ss_dssp TCSCHHHHHHHTCSSC-CHHHHHHHHHH-HTCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred CccchHHhhhhhcCcc-hhhHHHHHHHH-hCCC-CChHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 9999999999999987 47788889986 8994 899999999999999999988 676665443
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=1.5e-88 Score=709.07 Aligned_cols=367 Identities=17% Similarity=0.241 Sum_probs=333.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCccccEEEEeeCCceeEEEEEEEcCC
Q 014020 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQ 119 (432)
Q Consensus 40 ~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g~ 119 (432)
.+.+++|.+.|.+|.++|++|+++|.+||+ ||++++ |+++||||||+++|+|+|+|.|||||+||||||+++|+++|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 356677778888999999999999999999 998754 789999999999999999999999999999999999999775
Q ss_pred cceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEeeccce
Q 014020 120 RSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGF 199 (432)
Q Consensus 120 ~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~wtKgF 199 (432)
.. .+...+++++|.+++.+++++||||||+||++|+++++.. ..+.+++|||||||+.|+++++|+|++|||||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 32 2333457999999999999999999999999999986532 23568999999999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCcccccCCC-C-C
Q 014020 200 AIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLL-T-T 277 (432)
Q Consensus 200 ~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~-~-~ 277 (432)
++++++ ||+++|+++++|+|+|++|++|+|||+||+++.+|.++++.||+|+|||+|+||+|+.++|+|+++.. + .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999996531 3 4
Q ss_pred CCcEEEEcccCCcCCCC--CCCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCCCCccccccCCc
Q 014020 278 SGGMVVNMEWGNFWSSH--LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFI 355 (432)
Q Consensus 278 ~~~miINtEwG~fg~~~--lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~~~~~~l~~~~~ 355 (432)
.+.|+||||||+|++++ +|+|+||+++|..|.||| |+||||+||||||||+|++|+++++++.+|...|++|.++|+
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~~~~~l~~~~~ 314 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXXXAXSFXAANV 314 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSSCCCSCCSTTC
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccccchhcccccC
Confidence 67899999999998654 899999999999999999 999999999999999999999999999888768899999999
Q ss_pred cCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHhhhH
Q 014020 356 LRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLFCLL 421 (432)
Q Consensus 356 l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~~~~ 421 (432)
|+|++||.|++|++++++.++.+|++.++++ +|.+|+++||++|++|..|++ +|.|+...-+
T Consensus 315 ~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA---~l~A~~iaai 376 (457)
T 2yhx_A 315 ENTSYPAKIQKLPHFDLRXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAF---RLVVCXIXAI 376 (457)
T ss_dssp SCTHHHHHHHHCCSSSCHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHH---HHHTHHHHHH
T ss_pred cChHHHHHHhcCCchhhhHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 9999999999999999999999997779996 699999999999999999888 7777665443
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=4.3e-75 Score=651.21 Aligned_cols=369 Identities=35% Similarity=0.557 Sum_probs=332.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCCccccEEEEeeCCceeEEEEEEE
Q 014020 39 VMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEG--GSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQL 116 (432)
Q Consensus 39 ~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~--~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L 116 (432)
..+.+++|.+.|.++.++|++|+++|++||++||+++. .|+++||||||+++|+|+|+|.|||||+||||+||++|++
T Consensus 18 ~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~~ 97 (917)
T 1cza_N 18 QVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQV 97 (917)
T ss_dssp HHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEEe
Confidence 44567888888899999999999999999999998754 4789999999999999999999999999999999999999
Q ss_pred cCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEeec
Q 014020 117 GGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWT 196 (432)
Q Consensus 117 ~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~wt 196 (432)
.|++...++...+++++|++++.+++++||||||++|++|+++++.. .+.+++|||||||++|+++++|+|++||
T Consensus 98 ~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~wt 172 (917)
T 1cza_N 98 NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITWT 172 (917)
T ss_dssp EEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCCC
T ss_pred cCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEecc
Confidence 76533333334457999998888899999999999999999887532 2457999999999999999999999999
Q ss_pred cceecCCCCCCcHHHHHHHHHHHcC-CCceEEEEEechHHhhhcccccCCcceEEEEeecccceeeEcccCCcccccCCC
Q 014020 197 KGFAIESMVGQEVTESLQRALDKRG-LDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLL 275 (432)
Q Consensus 197 KgF~~~~~~G~dv~~lL~~al~r~~-l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~ 275 (432)
|||++++++|+|++++|++++.|+| +|+++++|+|||+||+++.+|.++++.||+|+|||+|+||+|+..+|+++.+.
T Consensus 173 kgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~- 251 (917)
T 1cza_N 173 KRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD- 251 (917)
T ss_dssp TTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC-
T ss_pred cCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC-
Confidence 9999999999999999999999998 89999999999999999999999999999999999999999999999998762
Q ss_pred CCCCcEEEEcccCCcCCCC---CCCCcchhhhhccCCCCCCceeeecccccchHHHHHHHHHHHhhcCCCCC-CCccccc
Q 014020 276 TTSGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSRLS 351 (432)
Q Consensus 276 ~~~~~miINtEwG~fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~iL~~l~~~~~lF~-~~~~~l~ 351 (432)
.++|+||+|||.|++++ .|+|+||..+|..+.|||+|+||||+||+||||++|+++.++++++.+|. ..|+.|.
T Consensus 252 --~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l~ 329 (917)
T 1cza_N 252 --EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELL 329 (917)
T ss_dssp --SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTTT
T ss_pred --CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhhc
Confidence 45799999999998765 36999999999999999999999999999999999999999999888887 6788899
Q ss_pred cCCccCchhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhHhhhhhhchHHHHHHHhhhH
Q 014020 352 MAFILRTPLMAAMHEDDSPELTEVARILNDVLEVDESLVSSLGLFVHQMNFFFFWVNGITWLMQSLFCLL 421 (432)
Q Consensus 352 ~~~~l~T~~ls~i~~d~s~~l~~~~~iL~~~~~~~~~t~~d~~~vr~i~~~V~~r~~~~~~~~~~~~~~~ 421 (432)
+++.++++++|.++ |+++++..++.+++. ++++ ++..|++.++.+|.+|+.|+. +++|+...-+
T Consensus 330 ~~~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~~-~~~~D~~~~~~~a~~v~~raa---~llA~gia~i 393 (917)
T 1cza_N 330 TRGKFNTSDVSAIE-KNKEGLHNAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSA---NLVAATLGAI 393 (917)
T ss_dssp STTSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred cccccChHHHHHHh-cccccHHHHHHHHHH-hCCC-CCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99999999999999 568889999999987 8995 899999999999999999888 6666555443
No 8
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.73 E-value=3.2e-07 Score=93.02 Aligned_cols=189 Identities=16% Similarity=0.152 Sum_probs=121.7
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CCcceeecccccCCCCCccccEEEEeeCCceeEEEEEEEcCCc
Q 014020 45 ELEEGCETTVSRLRQVVDAMAVEMHAGLASEGG----SKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQR 120 (432)
Q Consensus 45 ~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~----s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g~~ 120 (432)
++.+...+|..++..+++++.+ +||-.+.. ++----|+.+.--| +.+.++++|+|||++|++++.+.++
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4555667888888888888876 67732211 11112222222112 4567999999999999999998663
Q ss_pred ceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEeecccee
Q 014020 121 SSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGFA 200 (432)
Q Consensus 121 ~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~wtKgF~ 200 (432)
+.... .++.|. .+.+++++.+++.|.+++++.+.. ..+..-+|+.+.-|++. ++|++. +...+
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~~l- 170 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMPFY- 170 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECTTC-
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCCCC-
Confidence 33322 233332 246789999999999999875421 12234455555555654 346666 33332
Q ss_pred cCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCcceEEEEeecccceeeEcc
Q 014020 201 IESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAVIIGTGTNACYLER 264 (432)
Q Consensus 201 ~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~~~iGlIlGTGtNacY~E~ 264 (432)
++..+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+.+|||..++++.+
T Consensus 171 -~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 231 (406)
T 1z6r_A 171 -EDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITD 231 (406)
T ss_dssp -TTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred -CCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEEC
Confidence 2334678888888876 454 56889999988876542 456789999999999999864
No 9
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.72 E-value=3.7e-07 Score=93.55 Aligned_cols=184 Identities=17% Similarity=0.197 Sum_probs=120.8
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCC----C---CcceeecccccCCCCCccccEEEEeeCCceeEEEEEEEcC
Q 014020 46 LEEGCETTVSRLRQVVDAMAVEMHAGLASEGG----S---KLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGG 118 (432)
Q Consensus 46 ~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~----s---~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g 118 (432)
+.+...+|..++.++++.+.+ +||-.+.. | .-+.+.++. | +.+.++++|+|||++|++++.+.|
T Consensus 59 la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~G 129 (429)
T 1z05_A 59 LSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELGG 129 (429)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETTS
T ss_pred HHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCCC
Confidence 444566888888888888876 56632211 0 012222222 2 456799999999999999999865
Q ss_pred CcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCceEEEeeccc
Q 014020 119 QRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKG 198 (432)
Q Consensus 119 ~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~g~Li~wtKg 198 (432)
. +.... .++.|. .+.+++++.+++.|.+++++.+.. ..+..-+|+...-|++. ++|++. +...
T Consensus 130 ~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~~ 192 (429)
T 1z05_A 130 E---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVL-QMPH 192 (429)
T ss_dssp C---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEE-ECSS
T ss_pred C---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEe-ecCC
Confidence 3 33322 344443 247899999999999999876421 12234455555555664 345554 3333
Q ss_pred eecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCcceEEEEeecccceeeEcc
Q 014020 199 FAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAVIIGTGTNACYLER 264 (432)
Q Consensus 199 F~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~~~iGlIlGTGtNacY~E~ 264 (432)
+. -.+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+++|||..++++.+
T Consensus 193 l~---w~~~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 253 (429)
T 1z05_A 193 YN---VKNLALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLD 253 (429)
T ss_dssp SB---CSSBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred CC---CCCCCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEEC
Confidence 32 23568888888776 454 56889999988876543 457889999999999999864
No 10
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.59 E-value=1.2e-06 Score=88.25 Aligned_cols=187 Identities=14% Similarity=0.215 Sum_probs=119.4
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCC---CCCcceeecccccCCCCCccccEEEEeeCCceeEEEEEEEcCCcc
Q 014020 45 ELEEGCETTVSRLRQVVDAMAVEMHAGLASEG---GSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQRS 121 (432)
Q Consensus 45 ~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~---~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g~~~ 121 (432)
++.+...+|..++..+++++.+ +||-.+. .++-=--|+.+.-- .+.+.++++|+|||++|++++.+.+.
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~~---~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKIS---PNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEEC---GGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEEc---cCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4444556899999999888876 6773211 11111112211111 24567999999999999999998653
Q ss_pred eeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeee--eeeccCCceEEEeeccce
Q 014020 122 SILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFP--VKQTSVSSGILIKWTKGF 199 (432)
Q Consensus 122 ~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP--~~qt~i~~g~Li~wtKgF 199 (432)
+.... .++.|.. .+.+++++.+++.|.+++++.+.. ..-.+|..++.| ++. .+|++. +...+
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~------~~~i~gigi~~pG~vd~---~~g~v~-~~~~l 173 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL------GSKLSALTVAAPGPIDT---ERGIII-DPRNF 173 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT------TCCCCEEEEEESSCEET---TTTEEC-CCSSC
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCC------cCcEEEEEEEeeccEEC---CCCEEe-ccCCC
Confidence 33322 3444432 257889999999999999875321 112345555555 543 245544 22223
Q ss_pred ecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCC--cceEEEEeecccceeeEcc
Q 014020 200 AIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDE--DTVAAVIIGTGTNACYLER 264 (432)
Q Consensus 200 ~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~--~~~iGlIlGTGtNacY~E~ 264 (432)
+..+.++.+.|++.+ ++| +.|.||..+..++-.+... +..+.+++|||..++++.+
T Consensus 174 ---~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~ 231 (380)
T 2hoe_A 174 ---PLSQIPLANLLKEKY---GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIID 231 (380)
T ss_dssp ---TTBTSCHHHHHHHHH---CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEET
T ss_pred ---CCcCCChHHHHHHHh---CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEEC
Confidence 224678888888876 443 6788999999888654332 7789999999999999864
No 11
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.58 E-value=1.2e-06 Score=85.45 Aligned_cols=141 Identities=17% Similarity=0.227 Sum_probs=97.1
Q ss_pred ccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccce
Q 014020 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGF 176 (432)
Q Consensus 97 G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGf 176 (432)
+.+|++|+|||++|++++.+.++ +.... .++.|.. .+.+++++.+++.|.+++++.+.. ..-.+|.
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~------~~~i~~i 71 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMK------KEDFVGI 71 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCC------GGGEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCC------ccceeEE
Confidence 46899999999999999998653 33322 3444432 346789999999999999876421 1223455
Q ss_pred eeeee--eeeccCCceEEEeeccceecCCCCCC-cHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc----cCCcceE
Q 014020 177 TFSFP--VKQTSVSSGILIKWTKGFAIESMVGQ-EVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVA 249 (432)
Q Consensus 177 TFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~-dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay----~~~~~~i 249 (432)
.++.| ++. ++|+++ ++..+. -.+. ++.+.|++.+ ++| +.|.||+.+..++-.+ .+.+..+
T Consensus 72 gi~~pG~vd~---~~g~v~-~~~~l~---w~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~ 138 (326)
T 2qm1_A 72 GMGTPGSVDI---EKGTVV-GAYNLN---WTTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVI 138 (326)
T ss_dssp EEEESSEEET---TTTEEE-CBGGGT---BCSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEE
T ss_pred EEecccceeC---CCCEEE-ecCCCC---ccCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEE
Confidence 55555 543 346554 232232 2356 8888888776 444 6688999999887544 3457889
Q ss_pred EEEeecccceeeEcc
Q 014020 250 AVIIGTGTNACYLER 264 (432)
Q Consensus 250 GlIlGTGtNacY~E~ 264 (432)
.+++|||..++++.+
T Consensus 139 ~l~~GtGiG~giv~~ 153 (326)
T 2qm1_A 139 FITLGTGVGGGIVAA 153 (326)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECCceEEEEEEC
Confidence 999999999999864
No 12
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.34 E-value=5e-06 Score=81.59 Aligned_cols=136 Identities=19% Similarity=0.308 Sum_probs=92.5
Q ss_pred ccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccce
Q 014020 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGF 176 (432)
Q Consensus 97 G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGf 176 (432)
+.+|++|+|||++|++++.+.++ +.... .++.|.. +.+++++.|.+.+.++..... ...|.
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~----------~i~~i 84 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPHT----SYSAFLDAVCELVEEADQRFG----------VKGSV 84 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCS----CHHHHHHHHHHHHHHHHHHHT----------SCCEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC----------CccEE
Confidence 35899999999999999998653 33322 3444431 467888999888888776532 13345
Q ss_pred eeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCcceEE
Q 014020 177 TFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAA 250 (432)
Q Consensus 177 TFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~~~iG 250 (432)
.++.| ++. ++|+++ ++ +.+...+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.
T Consensus 85 gi~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~ 151 (327)
T 2ap1_A 85 GIGIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMG 151 (327)
T ss_dssp EEEESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEE
T ss_pred EEEeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEE
Confidence 55554 554 234443 22 223345678888888876 344 67889999988875543 3567899
Q ss_pred EEeecccceeeEcc
Q 014020 251 VIIGTGTNACYLER 264 (432)
Q Consensus 251 lIlGTGtNacY~E~ 264 (432)
+++|||..++++.+
T Consensus 152 l~~GtGiG~giv~~ 165 (327)
T 2ap1_A 152 LILGTGVGGGLVLN 165 (327)
T ss_dssp EEESSSEEEEEEET
T ss_pred EEECCcEEEEEEEC
Confidence 99999999998864
No 13
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.31 E-value=2.3e-06 Score=84.34 Aligned_cols=131 Identities=21% Similarity=0.213 Sum_probs=82.1
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
.+|++|+|||+.|++++.+.|+ +.... ..+ |......+.+++++.|++.|.+++++.+.. ...-..|..
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEA--DGL-STNHWLIGTDKCVERINEMVNRAKRKAGVD-----PLVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE--EEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCC-----TTCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEE--eCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCC-----cccceeEEE
Confidence 5899999999999999988653 33322 121 111111356889999999999999876421 010133444
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHhhhcccccCCcceEEEEeecc
Q 014020 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKR-GLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTG 256 (432)
Q Consensus 178 FSFP~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~-~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTG 256 (432)
++.| +.+..+-...|.+.|+++ +.....+.|.||+.+..++ .+ .+..+.+++|||
T Consensus 76 i~~p---------------------G~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~--~~~~v~v~~GTG 131 (347)
T 2ch5_A 76 LSLS---------------------GGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT-AT--PDGGVVLISGTG 131 (347)
T ss_dssp EEET---------------------TTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HC--SSCEEEEEESSS
T ss_pred Eecc---------------------CCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh-hC--CCCcEEEEEcCC
Confidence 4444 222211123445555543 2001236788999999998 44 356789999999
Q ss_pred cceeeEc
Q 014020 257 TNACYLE 263 (432)
Q Consensus 257 tNacY~E 263 (432)
.+++.+.
T Consensus 132 ig~~~v~ 138 (347)
T 2ch5_A 132 SNCRLIN 138 (347)
T ss_dssp EEEEEEC
T ss_pred ceeEEEc
Confidence 9998775
No 14
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.19 E-value=2.1e-05 Score=77.76 Aligned_cols=135 Identities=19% Similarity=0.332 Sum_probs=93.9
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
-++++|+|||++|++++.+.++ +.... .++.|.. +.+++++.|++.+.++..+.+ ...|..
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~----------~~~gig 85 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPTD----DYPLLLETIAGLVAKYDQEFA----------CEGKIG 85 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCTT----CHHHHHHHHHHHHHHHHHHHT----------SCCEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC----------CccEEE
Confidence 5899999999999999988653 33322 3455532 578899999999988876542 134555
Q ss_pred eeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCcceEEE
Q 014020 178 FSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAV 251 (432)
Q Consensus 178 FSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~~~iGl 251 (432)
++.| ++. .+|++. .+ . .+...+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+
T Consensus 86 i~~pG~vd~---~~g~v~-~~-~--~~~~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l 152 (327)
T 4db3_A 86 LGLPGMEDA---DDATVL-TV-N--VPAAKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGL 152 (327)
T ss_dssp EEESEEECT---TTCCEE-ES-S--SGGGTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEE
T ss_pred EEeeccEeC---CCCEEE-cC-C--CccccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEE
Confidence 6655 442 245443 32 1 22235678888888776 455 56789999888776553 45678999
Q ss_pred EeecccceeeEcc
Q 014020 252 IIGTGTNACYLER 264 (432)
Q Consensus 252 IlGTGtNacY~E~ 264 (432)
.+|||..++++.+
T Consensus 153 ~~GtGiG~gii~~ 165 (327)
T 4db3_A 153 ILGTGFGGGLIYE 165 (327)
T ss_dssp EESSSEEEEEEET
T ss_pred EeCccceEEEEEC
Confidence 9999999999864
No 15
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.09 E-value=2.8e-05 Score=76.88 Aligned_cols=142 Identities=25% Similarity=0.275 Sum_probs=94.5
Q ss_pred cccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccc
Q 014020 96 KGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELG 175 (432)
Q Consensus 96 ~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LG 175 (432)
.+.+|++|+|||++|++++.+.++ +.... .++.|. +.+++++.+.+.+.+++.+.... ..-.+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~~------~~~i~g 92 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNPK-----TYEERINLILQMCVEAAAEAVKL------NCRILG 92 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECCS-----SHHHHHHHHHHHHHHHHHHHHHT------TEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCCC-----CHHHHHHHHHHHHHHHHHhcccc------cCceEE
Confidence 357899999999999999988653 33322 233342 46788899999999988764311 123456
Q ss_pred eeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCcceE
Q 014020 176 FTFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVA 249 (432)
Q Consensus 176 fTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~~~i 249 (432)
..+|.| ++. ++|+++.-+ .+ .++-.+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+
T Consensus 93 igi~~pG~vd~---~~g~v~~~~-~~-~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v 161 (343)
T 2yhw_A 93 VGISTGGRVNP---REGIVLHST-KL-IQEWNSVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKGLENFV 161 (343)
T ss_dssp EEEEESSEEET---TTTEEEECC-TT-SSSCSSEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEE
T ss_pred EEEecccCEeC---CCCEEEeCC-cC-CCCCcCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCCCCcEE
Confidence 666666 443 245554211 11 01223567788888765 444 66889999988876542 446789
Q ss_pred EEEeecccceeeEcc
Q 014020 250 AVIIGTGTNACYLER 264 (432)
Q Consensus 250 GlIlGTGtNacY~E~ 264 (432)
-+++|||..++++.+
T Consensus 162 ~i~~GtGiG~gii~~ 176 (343)
T 2yhw_A 162 TLITGTGIGGGIIHQ 176 (343)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECCCEEEEEEEC
Confidence 999999999998864
No 16
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.05 E-value=2.1e-05 Score=77.32 Aligned_cols=133 Identities=20% Similarity=0.263 Sum_probs=89.6
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
.+|++|+|||++|++++.+.+. +.... .++.| .+.+++++.|++.+.+++++. -..|..
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~-----------~i~gig 61 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEGH-----------DVEAVG 61 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC-----------CEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc-----------CceEEE
Confidence 5799999999999999987653 23222 23333 247889999999998886431 235666
Q ss_pred eeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc----cCCcceEEE
Q 014020 178 FSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAV 251 (432)
Q Consensus 178 FSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay----~~~~~~iGl 251 (432)
++.| ++. +.|++.. +-.+ +-.+.++.+.|++.+ ++| +.|.||..+..++-.+ .+.+..+.+
T Consensus 62 i~~pG~vd~---~~g~v~~-~~~l---~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l 128 (321)
T 3vgl_A 62 IGAAGYVDD---KRATVLF-APNI---DWRHEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVICI 128 (321)
T ss_dssp EEESSEECT---TSSCEEE-CSSS---CCEEECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEE
T ss_pred EeccccEeC---CCCEEEe-CCCC---CCcCCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEE
Confidence 6665 443 2344332 1111 223467778887776 454 6688999988877544 345788999
Q ss_pred EeecccceeeEcc
Q 014020 252 IIGTGTNACYLER 264 (432)
Q Consensus 252 IlGTGtNacY~E~ 264 (432)
.+|||.-++++.+
T Consensus 129 ~~GtGiG~gii~~ 141 (321)
T 3vgl_A 129 TLGTGLGGGIIIG 141 (321)
T ss_dssp EESSSEEEEEEET
T ss_pred EeCcceEEEEEEC
Confidence 9999999999874
No 17
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.02 E-value=0.00012 Score=70.04 Aligned_cols=148 Identities=19% Similarity=0.283 Sum_probs=92.4
Q ss_pred CCccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccc
Q 014020 93 GSEKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRR 172 (432)
Q Consensus 93 G~E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l 172 (432)
..+...++++|+|||++|++++.+.+. .+... ...++.|.. .+.+++++.|++.+.+++++.... ....
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~-~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~ 76 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGE-RFRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGS 76 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTT--EEEEE-EEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTC
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCC--eEEEE-EEecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccc
Confidence 344556899999999999999998532 23321 123444421 246889999999999987643210 1112
Q ss_pred ccceeeeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCc-c
Q 014020 173 ELGFTFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DED-T 247 (432)
Q Consensus 173 ~LGfTFSFP~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~-~ 247 (432)
-+|+...=|++ +|+++ ++-.+. ++-.+.++.+.|++.+ ++| +.+.||.-+..++-.+. +.+ .
T Consensus 77 ~igi~~pG~v~-----~g~v~-~~~~l~-~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~~~ 143 (267)
T 1woq_A 77 PVGVTFPGIIQ-----HGVVH-SAANVD-KSWLNTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAGVKGT 143 (267)
T ss_dssp CEEEEESSCEE-----TTEEC-CCTTSC-GGGTTCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTTCCSE
T ss_pred eEEEEccceEc-----CCEEE-eCCCCC-CCCCCCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCCCCCc
Confidence 24544444564 45543 332221 0223678888888876 444 67889999988875442 233 4
Q ss_pred eEEEEeecccceeeEcc
Q 014020 248 VAAVIIGTGTNACYLER 264 (432)
Q Consensus 248 ~iGlIlGTGtNacY~E~ 264 (432)
.+.+.+|||.-++.+.+
T Consensus 144 ~~~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 144 VLVITLGTGIGSAFIFD 160 (267)
T ss_dssp EEEEEESSSEEEEEEET
T ss_pred EEEEEECcceEEEEEEC
Confidence 67899999999999864
No 18
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.98 E-value=4.5e-05 Score=73.95 Aligned_cols=124 Identities=17% Similarity=0.165 Sum_probs=73.4
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceee
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTF 178 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTF 178 (432)
+++||+|||+.|++++. +++ +..... .+ |........+++++.|.+.+.+.+.... . -..|..+
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~~~--~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~-------~--~i~~igi 65 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGRFQ--TS-GINPFQQDRNEIDTALRSEVLPAIGQKA-------S--SIRAVYF 65 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEEE--EE-CCCTTTSCHHHHHHHHTTTTHHHHTTST-------T--TCCEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEEEE--CC-CCCcccCCHHHHHHHHHHHHHHHhCCCc-------c--cccEEEE
Confidence 78999999999999998 542 333221 11 1111122467788888877776542110 1 1234445
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCc-eEEEEEechHHhhhcccccCCcceEEEEeeccc
Q 014020 179 SFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDM-RVAALVNDTVGTLALGHYHDEDTVAAVIIGTGT 257 (432)
Q Consensus 179 SFP~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v-~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGt 257 (432)
+.| +.+ .+-...|++.|+++ ++. ..+.|.||..+..++.. ..+..+.+|+|||.
T Consensus 66 g~p---------------------G~~-~~~~~~l~~~l~~~-~~~~~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 66 YGA---------------------GCT-PAKAPMLNEALDSM-LPHCDRIEVAGDMLGAARALC--GDSEGIACILGTGS 120 (291)
T ss_dssp EET---------------------TCC-TTTHHHHHHHHHHH-STTCSEEEEECHHHHHHHHHT--TTSCEEEEEESSSE
T ss_pred ECC---------------------CCC-hHHHHHHHHHHHHh-cCCCCcEEEeCcHHHHHHhhc--CCCCcEEEEecCCh
Confidence 554 111 00012344555443 222 35888999999988753 44667999999999
Q ss_pred ceeeEc
Q 014020 258 NACYLE 263 (432)
Q Consensus 258 NacY~E 263 (432)
+++.+.
T Consensus 121 gg~~i~ 126 (291)
T 1zbs_A 121 NSCLFD 126 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 976653
No 19
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.96 E-value=3.9e-05 Score=75.44 Aligned_cols=181 Identities=17% Similarity=0.180 Sum_probs=111.3
Q ss_pred ccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccc
Q 014020 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (432)
Q Consensus 95 E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~L 174 (432)
..+.+|++|+|||++|++++.+.++ +.... .++.|. ..+.+++++.|++.+.++++. . . -..
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~---~~~~~~~~~~i~~~i~~~~~~-~-------~--~i~ 78 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTAD---WVNGIGFVESMKLEIGNFLKQ-Y-------P--IVK 78 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHH---HHTTTCHHHHHHHHHHHHHHH-C-------T--TCC
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCC---CCCHHHHHHHHHHHHHHHHhc-c-------C--Cee
Confidence 4567999999999999999987553 33322 233332 125678999999999998862 1 1 234
Q ss_pred ceeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc----cCCcce
Q 014020 175 GFTFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTV 248 (432)
Q Consensus 175 GfTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay----~~~~~~ 248 (432)
|+.++.| ++. ++|+++.-+ . .++..+.++.+.|++.+. ++| +.|.||..+..++-.+ .+.+..
T Consensus 79 gigi~~pG~vd~---~~g~v~~~~-~--l~~w~~~~l~~~l~~~~~--~~p---V~v~NDa~aaalaE~~~g~~~~~~~~ 147 (321)
T 3r8e_A 79 GVGIGWPGLVSL---DRTKVILLP-N--IPSVVNVPIVEILRSEFP--HIH---FKIENDAKCAALGEYYFGENKRMQTF 147 (321)
T ss_dssp EEEEEESSEECT---TSCCEEEBT-T--BCCCCSCCHHHHHHHHCT--TSE---EEEEEHHHHHHHHHHHHSTTTTCSSE
T ss_pred EEEEEecccEEC---CCCEEEeCC-C--CccccCCCHHHHHHHHcC--CCC---EEEEchHHHHHHHHHHhCCCCCCCcE
Confidence 5555555 542 355555322 1 122345777777776542 333 6788999988776544 345778
Q ss_pred EEEEeecccceeeEcccCCcccccCCCCCCCcEEEEcccCCcCCCCCCCCcchhhhhccCCCCCCceeeecccccchHHH
Q 014020 249 AAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDI 328 (432)
Q Consensus 249 iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEi 328 (432)
+-+.+|||.-++.+.+-. -+.+.. -.--|||.. + ..| .-.+|..+|+..|-+.
T Consensus 148 v~l~~GtGiG~gii~~G~---l~~G~~------g~aGEiGh~-----~--~~~-----------~gclE~~~S~~al~~~ 200 (321)
T 3r8e_A 148 ILLALGTGVGSGVMMNGK---LFIGGR------GNGTEVGHM-----L--TTR-----------GKSLENQVGINHLIAY 200 (321)
T ss_dssp EEEEESSSEEEEEEETTE---ECCCTT------SCCCCGGGC-----B--CTT-----------SSBSHHHHSHHHHHHH
T ss_pred EEEEECCceEEEEEECCE---EecCCC------CCCcccccc-----c--CCC-----------CCcHHHhcCHHHHHHH
Confidence 999999999999986411 011110 012355533 2 111 4578999999887666
Q ss_pred HHH
Q 014020 329 VRR 331 (432)
Q Consensus 329 vR~ 331 (432)
.+.
T Consensus 201 ~~~ 203 (321)
T 3r8e_A 201 THE 203 (321)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 20
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.96 E-value=5.3e-05 Score=76.75 Aligned_cols=137 Identities=23% Similarity=0.318 Sum_probs=90.5
Q ss_pred ccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHH---HHHHHHHhhCCCCCCCCCcc
Q 014020 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIAS---ALQQFVEKEGNGSEPPPIRR 171 (432)
Q Consensus 95 E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~---~i~~fl~~~~~~~~~~~~~~ 171 (432)
+.+.++++|+|||++|++++. .++ +.... ..++.|.. +.+++++.|++ .+.++++ .
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~------------~ 65 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP------------E 65 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS------------S
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh------------c
Confidence 456789999999999999998 552 33322 13455432 57888888888 5554432 1
Q ss_pred cccceeeeee--eeeccCCceEEEeeccceecCCCC-CCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc------
Q 014020 172 RELGFTFSFP--VKQTSVSSGILIKWTKGFAIESMV-GQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY------ 242 (432)
Q Consensus 172 l~LGfTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~-G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay------ 242 (432)
-..|..++.| ++. ++|++.. +-.+ ++-. |.++.+.|++.+ ++| +.|.||.-+..++-.+
T Consensus 66 ~i~gIGIavPG~Vd~---~~G~i~~-~~nl--p~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~ 133 (366)
T 3mcp_A 66 APVAISFAFPGPADY---QAGIIGD-LPNF--PSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPE 133 (366)
T ss_dssp CCCEEEEECCSSEET---TTTEECC-CTTC--GGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHH
T ss_pred CCeEEEEEecceEeC---CCCEEEe-CCCc--ccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcc
Confidence 2455555555 654 3465542 2212 2334 678888888876 555 6788998887776543
Q ss_pred -----------cCCcceEEEEeecccceeeEcc
Q 014020 243 -----------HDEDTVAAVIIGTGTNACYLER 264 (432)
Q Consensus 243 -----------~~~~~~iGlIlGTGtNacY~E~ 264 (432)
.+.+..+.+.+|||.-++.+.+
T Consensus 134 ~~~~l~~~g~~~~~~~~v~l~lGtGIG~givi~ 166 (366)
T 3mcp_A 134 INRRLREAGSTKRYKNLLGVTLGTGFGAGVVID 166 (366)
T ss_dssp HHHHHHHTTCCCCCCEEEEEEESSSEEEEEEET
T ss_pred cccccccccccCCCCcEEEEEECCcceEEEEEC
Confidence 3357789999999999999864
No 21
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.95 E-value=8.5e-05 Score=72.51 Aligned_cols=135 Identities=21% Similarity=0.247 Sum_probs=90.7
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceee
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTF 178 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTF 178 (432)
++++|+|||++|++++.+.+ ++. ...++.|.. ..+++++.|++.+.+++++... -..|..+
T Consensus 3 ~lgiDiGgt~i~~~l~d~~~----~l~--~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~---------~i~gigi 63 (302)
T 3vov_A 3 VVGLDLGGTKIAAGVFDGKR----LLS--KVVVPTPKE----GGERVAEALAEAAERAEREAGV---------RGEAIGL 63 (302)
T ss_dssp EEEEEECSSEEEEEEECSSS----BSC--CEEEECCSS----CHHHHHHHHHHHHHHHHHHHTC---------CCSSEEE
T ss_pred EEEEEEcCCEEEEEEEeCCC----cEE--EEEEcCCCC----ChHHHHHHHHHHHHHHHhhccC---------CceEEEE
Confidence 68999999999999997642 222 223455542 2378999999999998876421 2355555
Q ss_pred eee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc----cCCcceEEEE
Q 014020 179 SFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAVI 252 (432)
Q Consensus 179 SFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay----~~~~~~iGlI 252 (432)
+.| ++. ++|++.. .- +.++-.+.++.+.|++.+ ++| +.+.||..+..++-.+ .+.+..+-+.
T Consensus 64 ~~pG~vd~---~~g~v~~-~~--~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 131 (302)
T 3vov_A 64 GTPGPLDF---RRGVIRF-AP--NIPGVQDFPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLYLT 131 (302)
T ss_dssp EESSCEET---TTTEEC------CCTTCTTCCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEE
T ss_pred EecccEeC---CCCEEEc-CC--CCCCcCCCChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEEEE
Confidence 555 543 3454442 11 123345678888888766 444 6688999888776654 3456789999
Q ss_pred eecccceeeEcc
Q 014020 253 IGTGTNACYLER 264 (432)
Q Consensus 253 lGTGtNacY~E~ 264 (432)
+|||.-++++.+
T Consensus 132 ~GtGiG~gii~~ 143 (302)
T 3vov_A 132 VSTGIGGGVVLG 143 (302)
T ss_dssp ESSSEEEEEEET
T ss_pred ECCceeEEEEEC
Confidence 999999999864
No 22
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=97.95 E-value=9.9e-06 Score=78.60 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=61.6
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceee
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTF 178 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTF 178 (432)
|++||+|||+.|++++. +++ +..... .+ |.+......+++.+.|++.+.+.++.. -..|..+
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~~~~--~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~-----------~i~~igi 63 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIKRLG--TK-GINPFFQSEEEIQQKLTASLLPQLPEG-----------KFNAVYF 63 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEEEEE--EC-CCCTTTSCSTTTTTTTTC------------------------CEE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEEEEE--CC-CCCcccCCHHHHHHHHHHHHHHhcCcc-----------cccEEEE
Confidence 68999999999999997 543 333221 11 111111123455555555554443111 1134445
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCc-eEEEEEechHHhhhcccccCCcceEEEEeeccc
Q 014020 179 SFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDM-RVAALVNDTVGTLALGHYHDEDTVAAVIIGTGT 257 (432)
Q Consensus 179 SFP~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v-~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGt 257 (432)
+.|=-- .. .|. .|++.|+++ ++. ..+.|.||..+.+++.. ..+..+.+|+|||.
T Consensus 64 g~pG~~--~~----------------~~~----~l~~~l~~~-~~~~~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 64 YGAGCT--PE----------------KAP----VLRRAIADS-LPVIGNIKANSDMLAAAHGLC--GQKAGIACILGTGS 118 (291)
T ss_dssp ECTTCC--TT----------------TTH----HHHHHHHHH-SCCCSCCEEECSHHHHHHHTT--TTSCBEEEEESSSE
T ss_pred EcCCCC--HH----------------HHH----HHHHHHHHh-cCCCceEEEECcHHHHHHhhc--CCCCcEEEEeCCCh
Confidence 554110 00 012 344445443 222 24678899999988764 44567899999999
Q ss_pred ceeeEc
Q 014020 258 NACYLE 263 (432)
Q Consensus 258 NacY~E 263 (432)
+++.+.
T Consensus 119 ~g~gi~ 124 (291)
T 1zxo_A 119 NSCFYN 124 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 855553
No 23
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.87 E-value=9.7e-05 Score=70.90 Aligned_cols=134 Identities=16% Similarity=0.238 Sum_probs=86.3
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceee
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTF 178 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTF 178 (432)
++++|+|||++|++++.+.++ +.... .++.|.. .+.+++++.|.+.+.+++.+. .-+|+..
T Consensus 3 ~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~-----------~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAHA-----------QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGGC-----------SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhhC-----------CEEEEEe
Confidence 799999999999999987553 33332 3444432 246788888887776654321 1255544
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----CCcceEEEEee
Q 014020 179 SFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAVIIG 254 (432)
Q Consensus 179 SFP~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~----~~~~~iGlIlG 254 (432)
.=|++. ++|+++ ++-.+ ++-.+.++.+.|++.+ ++| +.+.||..+..++-.+. +. ..+.+++|
T Consensus 64 pG~vd~---~~g~v~-~~~~~--~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~G 130 (289)
T 2aa4_A 64 TGIIRD---GSLLAL-NPHNL--GGLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDIT-DMVFITVS 130 (289)
T ss_dssp SSEEET---TEEECS-SGGGG--GGGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEES
T ss_pred ccceeC---CCCEEE-eCCCC--CcccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCc-eEEEEEeC
Confidence 445654 234432 22222 1234567888887766 444 66889999988876543 23 78999999
Q ss_pred cccceeeEcc
Q 014020 255 TGTNACYLER 264 (432)
Q Consensus 255 TGtNacY~E~ 264 (432)
||..++++.+
T Consensus 131 tGiG~gii~~ 140 (289)
T 2aa4_A 131 TGVGGGVVSG 140 (289)
T ss_dssp SSEEEEEEET
T ss_pred ccEEEEEEEC
Confidence 9999998864
No 24
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.86 E-value=3.4e-05 Score=75.76 Aligned_cols=142 Identities=16% Similarity=0.248 Sum_probs=87.1
Q ss_pred ccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccc
Q 014020 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (432)
Q Consensus 95 E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~L 174 (432)
+.+.++++|+|||++|++++.+.+. +.... .++.|+. ..+++++.|.+.+.+++++.+ .-.+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~---------~~i~ 66 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFN---------ARCH 66 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHT---------EEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcC---------CCee
Confidence 4567999999999999999998663 33322 2333321 245678888888888776543 1245
Q ss_pred ceeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccc---ccCCcceE
Q 014020 175 GFTFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGH---YHDEDTVA 249 (432)
Q Consensus 175 GfTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~a---y~~~~~~i 249 (432)
|..++.| ++. ++|+++.- -.+...+.-+.++.+.|++.+ ++| +.+-||.-+..++.. ....+..+
T Consensus 67 gigi~~pG~vd~---~~g~v~~~-~~l~~~~~~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 67 GLVMGFPALVSK---DKRTIIST-PNLPLTAADLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEEEESSCBCT---TSSCBCSC-CSSSCCHHHHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEEEeccccEeC---CCCEEEeC-CCCCCccccCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceEE
Confidence 6666666 442 23433221 111111001135666776655 454 667899987665321 12346678
Q ss_pred EEEeecccceeeEcc
Q 014020 250 AVIIGTGTNACYLER 264 (432)
Q Consensus 250 GlIlGTGtNacY~E~ 264 (432)
.+.+|||.-++.+.+
T Consensus 137 ~v~~GtGiG~gii~~ 151 (310)
T 3htv_A 137 AAYLGTGMGFAVWMN 151 (310)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEeceeEEEEEEEC
Confidence 899999999999864
No 25
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.81 E-value=0.00017 Score=70.04 Aligned_cols=132 Identities=23% Similarity=0.351 Sum_probs=83.6
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
.++++|+|||++|++++.+.++ +.... .++.|. .+.+++.+.+.+ ++.+.. -..|..
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~----~~~~~~----------~i~gig 61 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKV----FLAENT----------DVTGIA 61 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHH----HHHTCT----------TCCEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHH----HHhhcC----------CeeEEE
Confidence 5899999999999999987553 33332 234442 234555555544 443321 234555
Q ss_pred eeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc----cCCcceEEE
Q 014020 178 FSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAV 251 (432)
Q Consensus 178 FSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay----~~~~~~iGl 251 (432)
++.| ++. ++|++..-. ..++..+.++.+.|++.+ ++| +.+.||.-+..++-.+ .+.+..+.+
T Consensus 62 i~~pG~vd~---~~g~v~~~~---~l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l 129 (297)
T 4htl_A 62 VSAPGYVNP---KTGLITMGG---AIRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCL 129 (297)
T ss_dssp EEESSEECT---TTCEEEECT---TCGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEE
T ss_pred EecCcceeC---CCCEEEeCC---CCCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 5555 543 346554321 112234567888887766 455 6788999887776544 356778999
Q ss_pred EeecccceeeEcc
Q 014020 252 IIGTGTNACYLER 264 (432)
Q Consensus 252 IlGTGtNacY~E~ 264 (432)
.+|||.-++.+.+
T Consensus 130 ~~GtGiG~giv~~ 142 (297)
T 4htl_A 130 TIGTGIGGGIFSN 142 (297)
T ss_dssp EESSSEEEEEEET
T ss_pred EECcceEEEEEEC
Confidence 9999999999864
No 26
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.68 E-value=0.00035 Score=68.41 Aligned_cols=133 Identities=14% Similarity=0.197 Sum_probs=84.2
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
-|+++|+|||++|++++.+.++ +.... .++.| +.+++++.|++ ++++. +..-+|+.
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~t~------~~~~~l~~i~~----~~~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDRI--EFPTX------MPDETIEXVIQ----YFSQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECC------CHHHHHHHHHH----HHTTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEEE--EecCC------ChHHHHHHHHH----HhccC---------CceEEEEE
Confidence 4799999999999999987553 33322 23333 34555555544 33221 12334444
Q ss_pred eeeeeeecc--CCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc----cCCcceEEE
Q 014020 178 FSFPVKQTS--VSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAV 251 (432)
Q Consensus 178 FSFP~~qt~--i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay----~~~~~~iGl 251 (432)
..=|++... ...|.+..-. ..+-.+.++.+.|++.+ ++| +.+.||.-+..++-.+ .+.+..+.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l 129 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLDSCLYI 129 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred eceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 444566532 1125554322 13345778888888877 454 6788999888776554 345788999
Q ss_pred EeecccceeeEcc
Q 014020 252 IIGTGTNACYLER 264 (432)
Q Consensus 252 IlGTGtNacY~E~ 264 (432)
.+|||.-++.+.+
T Consensus 130 ~~GtGiG~gii~~ 142 (302)
T 3epq_A 130 TIGTGIGAGAIVE 142 (302)
T ss_dssp EESSSEEEEEEET
T ss_pred EECCceEEEEEEC
Confidence 9999999999864
No 27
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.60 E-value=0.00078 Score=65.41 Aligned_cols=124 Identities=16% Similarity=0.124 Sum_probs=76.8
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccc-ccce
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRR-ELGF 176 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l-~LGf 176 (432)
.+|++|+|||+.|++++.+.++ +..... .+ |... ..+.+++++.+++.+.+++++.+.. .... +.|.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~~--~~-~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~-----~~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMAE--GG-ASAL-SQGIAKSWQAVLSTLEAAFQQAGLP-----AAPASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEEE--ES-CCCG-GGCHHHHHHHHHHHHHHHHHHTTCC-----CCCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEEe--CC-CCCc-ccCHHHHHHHHHHHHHHHHHhcCCC-----hhhhccceE
Confidence 5899999999999999987553 332221 11 1111 1346889999999999999875421 1223 2455
Q ss_pred eeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCC-ceEEEEEechHHhhhcccccCCcceEEEEe
Q 014020 177 TFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLD-MRVAALVNDTVGTLALGHYHDEDTVAAVII 253 (432)
Q Consensus 177 TFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~-v~v~aivNDTVgTLla~ay~~~~~~iGlIl 253 (432)
.++.| ++... |. . |..+ ++ -..+.|.||..+..++. +. .+..+.+++
T Consensus 80 gig~pG~v~~~~--------~~---------------~----l~~~-~~~~~pv~v~NDa~aaa~ge-~~-~~~~v~v~~ 129 (305)
T 1zc6_A 80 GLGLSGVHNRQW--------AG---------------E----FESQ-APGFARLSLATDGYTTLLGA-HG-GQPGIIVAL 129 (305)
T ss_dssp EEEESCCCTTSH--------HH---------------H----HHHT-CCCCSEEEEECHHHHHHHHH-TT-TSSEEEEEE
T ss_pred EEEecCCCchHH--------HH---------------H----HHHh-CCCCceEEEECCHHHHHHhh-cC-CCCeEEEEe
Confidence 55555 33211 21 0 2222 32 23478899999987775 33 355778999
Q ss_pred ecccceeeEc
Q 014020 254 GTGTNACYLE 263 (432)
Q Consensus 254 GTGtNacY~E 263 (432)
|||..++.+.
T Consensus 130 GTGigg~~i~ 139 (305)
T 1zc6_A 130 GTGSIGEALY 139 (305)
T ss_dssp SSSEEEEEEC
T ss_pred cCCeEEEEEe
Confidence 9999655443
No 28
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.51 E-value=0.00034 Score=70.08 Aligned_cols=190 Identities=17% Similarity=0.148 Sum_probs=106.0
Q ss_pred ccEEEEeeCCceeEEEEEEE----cCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccc
Q 014020 97 GIYYALDLGGTNFRVLRVQL----GGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRR 172 (432)
Q Consensus 97 G~fLAlDlGGTNlRv~~V~L----~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l 172 (432)
+.+|++|+|||+.|++++.+ .+ ++.... . ..|. .+.+++++.|++.+.++..... .-
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g---~il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~---------~~ 89 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSV---HACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM---------KR 89 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCE---EEEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH---------TT
T ss_pred CeEEEEEEccccEEEEEEecccCCCc---cEEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc---------cc
Confidence 46899999999999999998 33 233322 1 1232 2457788888887766543211 12
Q ss_pred ccceeeeee--eeeccCCceEEEeeccceecCCCCCC-cHHHHHHHHHHHcCCCceEEEEEechHHhhhc----------
Q 014020 173 ELGFTFSFP--VKQTSVSSGILIKWTKGFAIESMVGQ-EVTESLQRALDKRGLDMRVAALVNDTVGTLAL---------- 239 (432)
Q Consensus 173 ~LGfTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~-dv~~lL~~al~r~~l~v~v~aivNDTVgTLla---------- 239 (432)
.+|..++.| ++. |++. .. .++..+. ++.+++++ .+++..+.|.||..+..++
T Consensus 90 i~gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~-----~~~~~pv~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 90 VKAGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKA-----LFPPGHSAILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTT-----TSCTTSEEEEEHHHHHHHHHHHHHHTTCH
T ss_pred ccEEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHH-----hcCCCCEEEEccHhHHhccccccChhhhc
Confidence 356666666 443 3332 11 1111222 44333322 1334347789999998888
Q ss_pred -----ccc----------------cCCcceEEEEeecccceeeEcccCCcccccCCCCCCCcEEEEcccCCcCCCCCCCC
Q 014020 240 -----GHY----------------HDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRT 298 (432)
Q Consensus 240 -----~ay----------------~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~miINtEwG~fg~~~lp~T 298 (432)
-.+ .+.+..+.+++|||..++++.+-.- ..+....-.|||...-+.-..+
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l---------~~G~~~~aGE~Gh~~~~~~~~c 225 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPP---------MNQHIVVPLELGSQTLPMRKDI 225 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC------------CEEEEEECGGGSBCCCSSCH
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcc---------cCCCcccccccceeecCCCCCc
Confidence 222 2346789999999999999864210 1234566678886522100001
Q ss_pred cchhhhhccCCCCCCceeeecccccchHHHHHH
Q 014020 299 SYDIDLDAESPNPNDQGFEKMISGMYLGDIVRR 331 (432)
Q Consensus 299 ~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~ 331 (432)
.....+-.... +.-.+|..+||..|-++.+.
T Consensus 226 ~cg~~l~~~~~--~~g~lE~~~S~~~l~~~~~~ 256 (373)
T 2q2r_A 226 DYIQTLHAELK--LFPNYENMVSGAGLEFHYRQ 256 (373)
T ss_dssp HHHHHHHHHHT--SCCBHHHHSSHHHHHHHHHH
T ss_pred chhHHHHHHhh--ccccHhHhcCHHHHHHHHHH
Confidence 11111111110 24678999999888766554
No 29
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.48 E-value=0.00045 Score=66.39 Aligned_cols=129 Identities=23% Similarity=0.343 Sum_probs=78.5
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
.++++|+|||++|++++.+.++ +.... .++.| .+.+++.+.|.+. +++ . -..|..
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~-----~~~~~~~~~i~~~----i~~-~----------~i~gig 59 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTP-----ENLEDLLAWLDQR----LSE-Q----------DYSGIA 59 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCC-----SSHHHHHHHHHHH----HTT-S----------CCSEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EEeCC-----CCHHHHHHHHHHH----HHh-C----------CCcEEE
Confidence 3899999999999999987553 33322 34444 2355666655544 432 1 124555
Q ss_pred eeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccc--cCCcceEEEEe
Q 014020 178 FSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY--HDEDTVAAVII 253 (432)
Q Consensus 178 FSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay--~~~~~~iGlIl 253 (432)
++.| ++. ++|++.. +..+ +.-.+.++.+.| +. -++| +.+.||..+..++-.+ .+.+..+.+++
T Consensus 60 i~~pG~vd~---~~g~v~~-~~~~--~~~~~~~l~~~l-~~---~~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~ 126 (292)
T 2gup_A 60 MSVPGAVNQ---ETGVIDG-FSAV--PYIHGFSWYEAL-SS---YQLP---VHLENDANCVGLSELLAHPELENAACVVI 126 (292)
T ss_dssp EEESSEECT---TTCBEES-CCSS--GGGSSSBHHHHT-GG---GCCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEE
T ss_pred EEecCcccC---CCCEEEe-cCCC--CcccCCCHHHHH-HH---cCCC---EEEechHHHHHHHHHHhcCCCCeEEEEEE
Confidence 5555 543 2354442 1111 111245666665 43 3554 5678999998887643 34567899999
Q ss_pred ecccceeeEcc
Q 014020 254 GTGTNACYLER 264 (432)
Q Consensus 254 GTGtNacY~E~ 264 (432)
|||..++.+.+
T Consensus 127 GtGiG~giv~~ 137 (292)
T 2gup_A 127 GTGIGGAMIIN 137 (292)
T ss_dssp SSSEEEEEEET
T ss_pred CCceEEEEEEC
Confidence 99999998853
No 30
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.29 E-value=0.00048 Score=66.45 Aligned_cols=116 Identities=16% Similarity=0.120 Sum_probs=73.1
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccccee
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfT 177 (432)
.+|++|+|||+.|++++.+.++ +.... .++.|. ....+.+++++.|++.+.+++.+. +.|..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~------------~~~ig 64 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGN-YHNVGLTRAIENIKEAVKIAAKGE------------ADVVG 64 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCC-HHHHCHHHHHHHHHHHHHHHHTSC------------CSEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCC-cccCCHHHHHHHHHHHHHHHHhcC------------CCEEE
Confidence 3799999999999999987553 33322 233332 112356889999999888876421 23444
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCCcceEEEEeeccc
Q 014020 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGT 257 (432)
Q Consensus 178 FSFP~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIlGTGt 257 (432)
++.|=.. .+.+. ..|.+.|++ +++ .+.+.||..+..++... .+..+-+++|||.
T Consensus 65 i~~~G~~--~~~~~-------------------~~l~~~l~~--~~~-pv~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 65 MGVAGLD--SKFDW-------------------ENFTPLASL--IAP-KVIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp EEETTCC--SHHHH-------------------HHHHHHHTT--SSS-EEEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred EEcCCCC--chhHH-------------------HHHHHHHHh--CCC-CEEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 5544221 01111 234555555 443 46789999999887654 4567889999994
No 31
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.99 E-value=0.0045 Score=60.87 Aligned_cols=183 Identities=15% Similarity=0.150 Sum_probs=98.6
Q ss_pred cccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccc
Q 014020 96 KGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELG 175 (432)
Q Consensus 96 ~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LG 175 (432)
.+.++++|+||||+|++++.+... ++.... .+ |.. +.+.+ .+.|.+++++... -..|
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g--~i~~~~--~~--~~~----~~~~~----~~~i~~~~~~~~~---------~i~g 69 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASG--EISQAK--TY--SGL----DYPSL----EAVIRVYLEEHKV---------EVKD 69 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTC--CEEEEE--EE--EGG----GCSCH----HHHHHHHHHHSCC---------CCCE
T ss_pred CCEEEEEEechhheEEEEEECCCC--cEEEEE--Ee--cCC----CcCCH----HHHHHHHHHhcCC---------CccE
Confidence 346899999999999999987322 233221 22 221 11223 3444556654321 2456
Q ss_pred eeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhccccc----------
Q 014020 176 FTFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH---------- 243 (432)
Q Consensus 176 fTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~---------- 243 (432)
..++.| ++ .+.+ . .-.+.. . .+ .+.|++.+ ++| .+.|.||.-+..++-.+.
T Consensus 70 igi~~pG~vd-----~~~~-~-~~nl~w---~-~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~ 132 (332)
T 1sz2_A 70 GCIAIACPIT-----GDWV-A-MTNHTW---A-FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGG 132 (332)
T ss_dssp EEEEESSCCC-----SSEE-C-CSSSCC---C-EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSS
T ss_pred EEEEEeCcee-----CCEE-e-eeCCCC---c-CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCC
Confidence 666666 54 2332 1 111111 1 23 34555443 444 367889999988877643
Q ss_pred ----CCcceEEEEeecccceeeEcccCCcccccCCCCCCCcEEEEcccCCcCCCCCCCCcchhhhhc-cCCCCCCceeee
Q 014020 244 ----DEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDA-ESPNPNDQGFEK 318 (432)
Q Consensus 244 ----~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~miINtEwG~fg~~~lp~T~~D~~lD~-~S~nPG~q~fEK 318 (432)
+.+..+.+.+|||.-++.+.+-. .+..-.-.|+|... ..|....+..+-. --.+-|.-.+|.
T Consensus 133 g~~~~~~~~~~v~~GTGiG~giv~~g~-----------~G~~g~agE~GH~~--v~~~~~~~~~l~~~~c~~~g~gclE~ 199 (332)
T 1sz2_A 133 AEPVEGKPIAVYGAGTGLGVAHLVHVD-----------KRWVSLPGEGGHVD--FAPNSEEEAIILEILRAEIGHVSAER 199 (332)
T ss_dssp CCCCTTCCEEEEEESSSEEEEEEEEET-----------TEEEEEECCGGGSB--CCCCSHHHHHHHHHHHHHSSSCBGGG
T ss_pred CCCCCCCcEEEEEcCccceEEEEecCC-----------CCeeeCCCCccccC--cCCCChHHHHHHHHHHhccCCcchhh
Confidence 34667899999999999987521 22234556666431 1122221111000 000123457899
Q ss_pred cccccchHHHHHH
Q 014020 319 MISGMYLGDIVRR 331 (432)
Q Consensus 319 miSG~YLGEivR~ 331 (432)
++||.-|-...|.
T Consensus 200 ~~S~~~l~~~~~~ 212 (332)
T 1sz2_A 200 VLSGPGLVNLYRA 212 (332)
T ss_dssp TSSHHHHHHHHHH
T ss_pred hccHHHHHHHHHH
Confidence 9999888666654
No 32
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.54 E-value=0.0031 Score=63.65 Aligned_cols=145 Identities=14% Similarity=0.160 Sum_probs=77.6
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHH---HHHHHHHHHhhCCCCCCCCCccccc
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFI---ASALQQFVEKEGNGSEPPPIRRREL 174 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~I---A~~i~~fl~~~~~~~~~~~~~~l~L 174 (432)
.+|+||+|||++|++++.++ ++.... .++.|.... .+.+++.+.+ ++.|.+++++.+. ...-..
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~------~~~~i~ 69 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGY------SLSSFS 69 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTC------CGGGCS
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCC------CccCce
Confidence 47999999999999999852 333322 233332100 0122344555 7778888876532 122457
Q ss_pred ceeeeeeeeeccCCceEEEe-----------eccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechH---------
Q 014020 175 GFTFSFPVKQTSVSSGILIK-----------WTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTV--------- 234 (432)
Q Consensus 175 GfTFSFP~~qt~i~~g~Li~-----------wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTV--------- 234 (432)
|+ .+.|=.-.. .+|.+.. +++....+.. +-++.+.|++.+ ++|+ .+.||.-
T Consensus 70 gI-i~~pG~vd~-~~G~~~~i~~~~~~~l~~~~~~~~~~nl-~~~l~~~l~~~~---~~Pv---~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 70 AF-VSRGGLLDP-IPGGVYLVDGLMIKTLKSGKNGEHASNL-GAIIAHRFSSET---GVPA---YVVDPVVVDEMEDVAR 140 (381)
T ss_dssp EE-EEECCSCSC-BCSSEEECCHHHHHHHHHTTTCCCTTHH-HHHHHHHHHHHH---CCCE---EEESCTTBCCCCGGGT
T ss_pred EE-EecCCCCCC-CCCceEecCHHHHHHHHhcccccChhhh-hHHHHHHHHHhc---CCCE---EEeCCCccccCcHHHH
Confidence 88 887732111 1233310 0000111111 333444444333 6664 4899996
Q ss_pred Hhhh-----------------cc-----cccCCc--ceEEEEeecccceeeEcc
Q 014020 235 GTLA-----------------LG-----HYHDED--TVAAVIIGTGTNACYLER 264 (432)
Q Consensus 235 gTLl-----------------a~-----ay~~~~--~~iGlIlGTGtNacY~E~ 264 (432)
+.-+ +- .-.+.+ ..+.+.+|||.-+|.+.+
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~ 194 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRK 194 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEET
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEEC
Confidence 3333 22 112334 789999999999999864
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.30 E-value=0.024 Score=53.50 Aligned_cols=124 Identities=16% Similarity=0.187 Sum_probs=70.3
Q ss_pred ccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCccccc
Q 014020 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (432)
Q Consensus 95 E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~L 174 (432)
+.+.++++|+|||++|+ +...+. + . .+.+.|. ..+.+++.+.|++. +++. -..
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~-~---~~~~t~~---~~~~~~~~~~i~~~----i~~~-----------~i~ 56 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---E-E---RKVESGK---TMTGPEMVAAVTAM----AKDM-----------TYD 56 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---C-E---EEEECCT---TCCHHHHHHHHHHH----TTTC-----------CCS
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---E-E---EEEECCC---CCCHHHHHHHHHHH----HHhC-----------CCC
Confidence 34579999999999994 444332 2 1 1233332 23455666655543 3221 124
Q ss_pred ceeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCCcceEEEE
Q 014020 175 GFTFSFP--VKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVI 252 (432)
Q Consensus 175 GfTFSFP--~~qt~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~~~~iGlI 252 (432)
|..++.| ++. ++. +..+-.+. ++-.+.++. + +.++| +.+.||.-+.-++-.+. ...+.+.
T Consensus 57 gigi~~pG~Vd~----~~~-~~~~~nl~-~~w~~~~l~----~---~~~~p---v~v~NDanaaalge~~~--~~~~~l~ 118 (226)
T 3lm2_A 57 VIAMGYPGPVVH----NKP-LREPVNLG-EGWVGYDYE----G---AFGRP---VRIVNDALMQAIGSYNG--GRMLFLG 118 (226)
T ss_dssp EEEEEESSCEET----TEE-CSCCTTSC-SCCTTCCHH----H---HHTSC---EEEEEHHHHHHHHHCCS--SEEEEEE
T ss_pred EEEEEEEeEEEC----CeE-EEECCcCC-ccccCCchH----H---hcCCe---EEEEEHHHHHHHHHhhc--CcEEEEE
Confidence 5555555 653 232 22221110 122344543 2 23554 56789998887776554 5788999
Q ss_pred eecccceeeEc
Q 014020 253 IGTGTNACYLE 263 (432)
Q Consensus 253 lGTGtNacY~E 263 (432)
+|||.-++.+.
T Consensus 119 ~GtGiG~gii~ 129 (226)
T 3lm2_A 119 LGTGLGAAMIV 129 (226)
T ss_dssp ESSSEEEEEEE
T ss_pred eCCceEEEEEE
Confidence 99999999886
No 34
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.05 E-value=0.14 Score=53.53 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=44.7
Q ss_pred ccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhhC
Q 014020 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 95 E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
|...+|+||+|+|+.|++++...|+ ++...+.+++ .|+ .....+.+++++-+.+++.+.+++.+
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 3446899999999999999976443 3333333332 122 22345688999999999999988754
No 35
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=93.67 E-value=0.13 Score=53.77 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=43.9
Q ss_pred cccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecC--C-ccccccChhHHHHHHHHHHHHHHHhhC
Q 014020 96 KGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 96 ~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
..-+|+||+|+|+.|++++...| +++...+.+++. | +.....+.+++++-+.+++.+.+++.+
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 71 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPD---TVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAG 71 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTT---EEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEecCcceEEEEECCCC---CEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcC
Confidence 34689999999999999997544 244333333332 2 222345689999999999999987654
No 36
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=93.40 E-value=0.19 Score=52.35 Aligned_cols=61 Identities=18% Similarity=0.342 Sum_probs=43.7
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CC-ccccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IP-PELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
.+|+||+|+|+.|++++...|+ ++...+.+++ .| +.....+.+++++.+.+++.+.+++.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999987543 3333333332 22 223345689999999999999988754
No 37
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=93.37 E-value=0.22 Score=51.72 Aligned_cols=61 Identities=11% Similarity=0.279 Sum_probs=43.2
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
-+|+||+|+|+.|++++...|+ ++...+.+++ .|+ .....+.+++++-+.+++.+.+++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINEND 70 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999976443 3333333332 122 22345688999999999999987654
No 38
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=93.21 E-value=0.18 Score=52.73 Aligned_cols=61 Identities=20% Similarity=0.328 Sum_probs=43.4
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
.+|+||+|+|+.|++++...|+ ++...+.+++ .|+ .....+.+++++-+.++|.+.+++.+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 90 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSG 90 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999976443 3333333332 222 22345689999999999999987654
No 39
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.03 E-value=0.25 Score=51.21 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=42.3
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
.+|+||+|||+.|++++...|+ ++.....+++ .|+ .....+.+++++.+.+++.+.+++.+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAG 66 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcC
Confidence 4799999999999999975442 3333332332 121 12344678999999999999988754
No 40
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=93.00 E-value=0.22 Score=51.44 Aligned_cols=59 Identities=17% Similarity=0.376 Sum_probs=40.8
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhh
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKE 160 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~ 160 (432)
||+||+|||+.|++++..+|+ ++...+.+++ .|+ .....+.+++++.+.+++.+.+++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~ 63 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH 63 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC
Confidence 799999999999999965432 3333332332 122 1234467899999999999988763
No 41
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=92.69 E-value=0.2 Score=52.25 Aligned_cols=57 Identities=11% Similarity=0.097 Sum_probs=40.9
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CC-ccccccChhHHHHHHHHHHHHHH
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IP-PELMTGTSEDLFDFIASALQQFV 157 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip-~~~~~g~~~~LFd~IA~~i~~fl 157 (432)
.+|+||+|+|+.|++++...|+ ++...+.+++ .| +.....+.+++++.+.+++.+.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 5899999999999999976442 3333333332 12 22345578999999999999988
No 42
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=92.50 E-value=0.32 Score=50.43 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=42.5
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
.+|+||+|||+.|++++...|+ ++.....+++ .|+ .....+.+++++.+.+++.+.+++.+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 67 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSAR 67 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 4899999999999999965432 4433333332 122 12344678999999999999988754
No 43
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.49 E-value=0.24 Score=51.77 Aligned_cols=66 Identities=21% Similarity=0.254 Sum_probs=45.1
Q ss_pred CccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeec--CCc-cccccChhHHHHHHHHHHHHHHHhhCC
Q 014020 94 SEKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEGN 162 (432)
Q Consensus 94 ~E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~~ 162 (432)
+|+--||+||+|.|+.|++++...|+ ++...+.+++ .|+ .....+.+++++-+.++|.+.+++.+.
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~ 69 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADI 69 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCC
Confidence 35656789999999999999865442 3333333333 222 234557899999999999999987653
No 44
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=92.44 E-value=0.32 Score=50.49 Aligned_cols=61 Identities=16% Similarity=0.266 Sum_probs=42.3
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecC--Cc-cccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--PP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
.+|+||+|+|+.|++++...|+ ++.....+++. |+ .....+.+++++.+.+++.+.+++.+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGN 66 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcC
Confidence 4799999999999999976442 33333333321 21 12234678999999999999988754
No 45
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=92.40 E-value=0.34 Score=50.29 Aligned_cols=60 Identities=7% Similarity=0.028 Sum_probs=42.1
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecC--Cc-cccccChhHHHHHHHHHHHHHHHhh
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--PP-ELMTGTSEDLFDFIASALQQFVEKE 160 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~g~~~~LFd~IA~~i~~fl~~~ 160 (432)
.+|+||+|||+.|++++...++ ++.....+++. |+ .....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~ 67 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVL 67 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999986543 33333333321 21 1223467899999999999998764
No 46
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=92.27 E-value=0.21 Score=52.63 Aligned_cols=61 Identities=16% Similarity=0.402 Sum_probs=43.6
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecC--C-ccccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
-+|+||+|+|+.|++++...|+ ++...+.++++ | +.....+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999986443 33333333321 2 223455789999999999999988754
No 47
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=91.91 E-value=0.29 Score=51.02 Aligned_cols=59 Identities=15% Similarity=0.267 Sum_probs=42.3
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecC--C-ccccccChhHHHHHHHHHHHHHHHh
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEK 159 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~g~~~~LFd~IA~~i~~fl~~ 159 (432)
.+|+||+|+|+.|++++...|+ ++...+.+++. | +.....+.+++++.+.+++.+.+++
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~ 66 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK 66 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999976442 34333333332 2 2233557899999999999998875
No 48
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=91.58 E-value=0.31 Score=51.60 Aligned_cols=61 Identities=20% Similarity=0.342 Sum_probs=42.8
Q ss_pred cEEEEeeCCceeEEEEEEE-cCCcceeeeecceeec-------CC-------ccccccChhHHHHHHHHHHHHHHHhhC
Q 014020 98 IYYALDLGGTNFRVLRVQL-GGQRSSILSSDVERQP-------IP-------PELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L-~g~~~~~~~~~~~~~~-------Ip-------~~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
-+|+||+|+|+.|++++.. +|+ ++......++ .| +.....+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred EEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999987 553 4443333343 12 223345678999999999999987654
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=87.85 E-value=2 Score=44.08 Aligned_cols=79 Identities=18% Similarity=0.165 Sum_probs=46.2
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecce-eec--CCc-cccccChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccc
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVE-RQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRE 173 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~-~~~--Ip~-~~~~g~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~ 173 (432)
.||+||+|+|+.|++++..+++.......... ..+ .|. .....+.+++++-+.+++.+..... .+..-
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~--------~~i~~ 76 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAG--------IAIDS 76 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHTT--------CCCCE
T ss_pred eEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhCC--------CCceE
Confidence 48999999999999999875532111111100 001 111 1123357789999999888876421 12244
Q ss_pred cceee----eeeeee
Q 014020 174 LGFTF----SFPVKQ 184 (432)
Q Consensus 174 LGfTF----SFP~~q 184 (432)
+|++- --|++.
T Consensus 77 Igis~q~~~~v~~D~ 91 (489)
T 2uyt_A 77 IGIDTWGVDFVLLDQ 91 (489)
T ss_dssp EEEEECSSCEEEECT
T ss_pred EEEecCcccEEEECC
Confidence 66666 556665
No 50
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=85.91 E-value=0.87 Score=47.30 Aligned_cols=57 Identities=19% Similarity=0.214 Sum_probs=39.2
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecC-C-ccccccChhHHHHHHHHHHHHHH
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI-P-PELMTGTSEDLFDFIASALQQFV 157 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~I-p-~~~~~g~~~~LFd~IA~~i~~fl 157 (432)
.||+||+|+|+.|++++.-++ +++...+.++++ | +.....+.+++++.+.+++.+.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G---~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG---RMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS---CEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCC---cEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 589999999999999996332 344444333432 1 12234568999999999999876
No 51
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=82.21 E-value=2.9 Score=39.64 Aligned_cols=44 Identities=18% Similarity=0.323 Sum_probs=27.6
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHH
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIAS 151 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~ 151 (432)
+|+||.|+||+++++++ ++ ++.. .+++|-+ ...+.+++..++.+
T Consensus 5 ~L~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~-~~~t~de~~~~l~~ 48 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITE--DG--KTFR----RWRLSTG-VFQTEDELFSHLHP 48 (249)
T ss_dssp EEEEEECSSEEEEEEES--SS--SSCE----EEEEECC-TTCCHHHHHHHHHH
T ss_pred EEEEEECCCeEEEEEEE--CC--EEEE----EEEecCC-CCCCHHHHHHHHHH
Confidence 69999999999999984 32 2222 2344422 23456777766654
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=82.17 E-value=2.3 Score=44.40 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=36.0
Q ss_pred cEEEEeeCCceeEEEEEEE-cCCcceeeeecceeecCCccccccChhHHHHHHHHHHHH
Q 014020 98 IYYALDLGGTNFRVLRVQL-GGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQ 155 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L-~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~ 155 (432)
.+|+||+|+|+.|++++.+ +| +++...+.+ .|. ....+.+++++.+.+++++
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G---~i~~~~~~~--~~g-~~e~d~~~~~~~i~~~l~~ 58 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETG---ELVRFGQAK--HPN-GTSVDPSYWWSAFQEAAEQ 58 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTC---CEEEEEEEE--CCS-SSEECTHHHHHHHHHHHHH
T ss_pred EEEEEEeccccEEEEEEECCCC---eEEEEEEEe--CCC-CceECHHHHHHHHHHHHHh
Confidence 5899999999999999984 34 244433333 343 2345678899988887765
No 53
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=73.50 E-value=25 Score=34.60 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHhhhcccccC---C--cceEEEEeecccceeeE
Q 014020 210 TESLQRALDKRGLDMRVAALVNDTVGTLALGHYHD---E--DTVAAVIIGTGTNACYL 262 (432)
Q Consensus 210 ~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~---~--~~~iGlIlGTGtNacY~ 262 (432)
.+.+++|.++.|+ +++.++|+.+|..++..... . ...+=+=+|-||--..+
T Consensus 166 r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 166 KAALIAAAAAADL--EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHcCC--CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEE
Confidence 4677888888877 67889999999988776543 1 22222226777665444
No 54
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=71.21 E-value=62 Score=29.56 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=21.0
Q ss_pred HHHHHHHHcCCCceEEEEEechHHhhhcccc
Q 014020 212 SLQRALDKRGLDMRVAALVNDTVGTLALGHY 242 (432)
Q Consensus 212 lL~~al~r~~l~v~v~aivNDTVgTLla~ay 242 (432)
.++++.++.|+ ++..++++..|.+.+...
T Consensus 110 ~~~~~~~~~g~--~~~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 110 ACGHVVAGAGL--ELVTLVDEPVAAARALGI 138 (272)
T ss_dssp HHHHHHHHTTC--EEEEEECHHHHHHHHHTC
T ss_pred HHHHHHHHcCC--eeeecccHHHHHHHHHcC
Confidence 46667777665 567788999999876544
No 55
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=70.75 E-value=5.4 Score=38.24 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=30.8
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHHHhhC
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEG 161 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl~~~~ 161 (432)
+|+||+|+||.++++++ ++ ++.. .+++|-+ ..+.+++ +..+.++++..+
T Consensus 4 lL~IDIGNT~iK~gl~d--~~--~l~~----~~r~~T~--~~t~de~----~~~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD--GD--EIKL----RFRHTSK--VSTSDEL----GIFLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEEE----EEEEECS--CCCHHHH----HHHHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEE--CC--EEEE----EEEecCC--CCCHHHH----HHHHHHHHHHcC
Confidence 79999999999999984 32 3332 3555544 3455555 444555665543
No 56
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=69.87 E-value=36 Score=33.31 Aligned_cols=51 Identities=18% Similarity=0.207 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHhhhcccccCC------cceEEEEeecccceeeE
Q 014020 210 TESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDE------DTVAAVIIGTGTNACYL 262 (432)
Q Consensus 210 ~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~------~~~iGlIlGTGtNacY~ 262 (432)
.+.+++|.++.|+ +++.++|+.+|..++...... ...+=+=+|-||--..+
T Consensus 174 r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv 230 (404)
T 3i33_A 174 RQATKDAGTITGL--NVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSI 230 (404)
T ss_dssp HHHHHHHHHHHTC--EEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHcCC--CeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEE
Confidence 4667788877777 578899999999887655432 12222225666654443
No 57
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=68.45 E-value=43 Score=32.44 Aligned_cols=48 Identities=19% Similarity=0.240 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHhhhcccccCC-cceEEEE--eecccce
Q 014020 210 TESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDE-DTVAAVI--IGTGTNA 259 (432)
Q Consensus 210 ~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~-~~~iGlI--lGTGtNa 259 (432)
.+.+.+|.++.|+ +++.++|+.+|..++...... ....-+| +|-||--
T Consensus 169 r~~~~~a~~~aGl--~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~d 219 (394)
T 3qfu_A 169 RQATKDAGTIAGL--NVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFD 219 (394)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHcCC--ceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCcee
Confidence 4567778777776 568899999999887644322 2222233 5666653
No 58
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=61.78 E-value=40 Score=31.21 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=25.0
Q ss_pred EEEechHHhhhcccccCCcceEEEEeecccc-eeeEc
Q 014020 228 ALVNDTVGTLALGHYHDEDTVAAVIIGTGTN-ACYLE 263 (432)
Q Consensus 228 aivNDTVgTLla~ay~~~~~~iGlIlGTGtN-acY~E 263 (432)
-.||.-+|...+..+.++....-+.+|-|+. ..+++
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLD 111 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEEC
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEE
Confidence 4579999998888887776666666665544 45554
No 59
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=46.67 E-value=1.1e+02 Score=31.25 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCCceEEEEEechHHhhhcccccCCcceEEEEe--ecccc
Q 014020 211 ESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVII--GTGTN 258 (432)
Q Consensus 211 ~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~~~~iGlIl--GTGtN 258 (432)
+.+.+|.+..|+ +++.++|..+|..++...........+|+ |-||-
T Consensus 126 ~a~~~a~~~AGl--~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~ 173 (509)
T 2v7y_A 126 QATKDAGRIAGL--EVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTF 173 (509)
T ss_dssp HHHHHHHHHTTC--EEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCE
T ss_pred HHHHHHHHHcCC--CeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeE
Confidence 556677777775 57889999999988665443333344454 55543
No 60
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=46.65 E-value=58 Score=31.47 Aligned_cols=62 Identities=18% Similarity=0.256 Sum_probs=42.8
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCcccc-ccC-hhHHHHHHHHHHHHHHHh
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELM-TGT-SEDLFDFIASALQQFVEK 159 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~g~-~~~LFd~IA~~i~~fl~~ 159 (432)
.|-+||+|-.++|..+++..++..+++....+..++-+.+. ++. .++=.+-..+++..|...
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 47799999999999999996644455554444555665543 222 456667778888888654
No 61
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=46.22 E-value=35 Score=33.27 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=33.9
Q ss_pred ccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHH
Q 014020 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQ 155 (432)
Q Consensus 95 E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~ 155 (432)
+.|.++.+|+||.++=+++++++++. ++...+...+ .| ++++-++|++.+..
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~~s~~~~------lG-g~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVELSFSLQ------IG-VGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGGGCEEES------CC-HHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEeecCCCcc------hh-HHHHHHHHHHHHHH
Confidence 45778999999999999999985532 2221111122 22 66788888776543
No 62
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=45.07 E-value=32 Score=35.71 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=18.5
Q ss_pred cEEEEeeCCceeEEEEEEEcC
Q 014020 98 IYYALDLGGTNFRVLRVQLGG 118 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g 118 (432)
-||+||+|.|+.|++++...|
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G 31 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAEL 31 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEEcCcCEEEEEECCCC
Confidence 689999999999999997544
No 63
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=44.56 E-value=52 Score=31.25 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=26.9
Q ss_pred EEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHH
Q 014020 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIAS 151 (432)
Q Consensus 99 fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~ 151 (432)
+|+||.|.||+++++.+ ++ ++.. .++++-+ ...+.+++..++.+
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~-~~~t~de~~~~l~~ 45 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELRQ----HWRMETD-RHKTEDEYGMLVKQ 45 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEEE----EEEEECC-TTCCHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE--CC--EEEE----EEEecCC-CcCCHHHHHHHHHH
Confidence 68999999999999985 22 2332 2344422 12345666655544
No 64
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=41.29 E-value=53 Score=34.07 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=44.5
Q ss_pred eeecccccCCCCCccccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCcccc-ccC-hhHHHHHHHHHHHHHHHh
Q 014020 82 MLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELM-TGT-SEDLFDFIASALQQFVEK 159 (432)
Q Consensus 82 MlPTyv~~lPtG~E~G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~g~-~~~LFd~IA~~i~~fl~~ 159 (432)
|=|.+.. |.-...-.|=|||+|-.++|..+++..++...+........++-+.+. +|. .++=.+-..+++..|...
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~ 79 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVL 79 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 4455533 222233368899999999999999886544444443333455555442 221 345567777778777543
No 65
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=38.04 E-value=1.5e+02 Score=31.18 Aligned_cols=127 Identities=15% Similarity=0.188 Sum_probs=0.0
Q ss_pred ccEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccc---ccc---------------------------------
Q 014020 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPEL---MTG--------------------------------- 140 (432)
Q Consensus 97 G~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~---~~g--------------------------------- 140 (432)
+..++||||-||-.|+.++ ++...++....-...+|.-+ .++
T Consensus 2 ~~viGIDlGTt~s~va~~~--~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d 79 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMD--GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD 79 (605)
T ss_dssp --CEEEECCSSEEEEEEEE--TTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSS
T ss_pred CCEEEEEcCCcCEEEEEEE--CCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCc
Q ss_pred -------------------------------ChhHHHHHHHHHHHHHHHhhCCCCCCCCCcccccceeeeeeeeeccCCc
Q 014020 141 -------------------------------TSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSS 189 (432)
Q Consensus 141 -------------------------------~~~~LFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~qt~i~~ 189 (432)
+.+++...+-.++.+..+... ..-.-.+.++-|..-....+
T Consensus 80 ~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l--------~~~v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 80 EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYL--------GEPVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHH--------CSCCCEEEEEECTTCCHHHH
T ss_pred HHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHh--------CCCCcEEEEEECCCCCHHHH
Q ss_pred eEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccCC-cceEEEEeecc
Q 014020 190 GILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDE-DTVAAVIIGTG 256 (432)
Q Consensus 190 g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~~-~~~iGlIlGTG 256 (432)
+.+.+|....|+ +++.++|+.+|..++...... ....-+|+--|
T Consensus 152 ---------------------~a~~~A~~~AGl--~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlG 196 (605)
T 2kho_A 152 ---------------------QATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLG 196 (605)
T ss_dssp ---------------------HHHHHHHHTTTC--EEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEEC
T ss_pred ---------------------HHHHHHHHHcCC--ceEEEecCHHHHHHHhhhcccCCCCEEEEEECC
No 66
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=37.86 E-value=26 Score=37.09 Aligned_cols=52 Identities=17% Similarity=0.183 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCceEEEEEechHHhhhcccccC--C-cceEEEEeecccceeeEcc
Q 014020 211 ESLQRALDKRGLDMRVAALVNDTVGTLALGHYHD--E-DTVAAVIIGTGTNACYLER 264 (432)
Q Consensus 211 ~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~--~-~~~iGlIlGTGtNacY~E~ 264 (432)
+.+++|....|+ +++.++|+.+|.-++..... + ...+=+=+|-||--..+-.
T Consensus 152 ~a~~~Aa~~AGl--~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 4b9q_A 152 QATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIE 206 (605)
T ss_dssp HHHHHHHHHTTC--EEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHcCC--ceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 334445555555 56889999999987654432 1 2222233677776554443
No 67
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=37.11 E-value=22 Score=33.53 Aligned_cols=33 Identities=6% Similarity=-0.039 Sum_probs=23.3
Q ss_pred EEEechHHhhhcccccCCcceEEEEeeccccee
Q 014020 228 ALVNDTVGTLALGHYHDEDTVAAVIIGTGTNAC 260 (432)
Q Consensus 228 aivNDTVgTLla~ay~~~~~~iGlIlGTGtNac 260 (432)
.++|+.++...+..|..|++..-+=+|.++.-+
T Consensus 78 ~~v~Ei~ah~~ga~~~~~~~~~vidiGGqd~k~ 110 (270)
T 1hux_A 78 KQMSELSCHAMGASFIWPNVHTVIDIGGQDVKV 110 (270)
T ss_dssp EEECHHHHHHHHHHHHCTTCCEEEEEETTEEEE
T ss_pred CCcccHHHHHHHHHHhCCCCCEEEEECCCceEE
Confidence 348999999988888888776655566654433
No 68
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=35.03 E-value=79 Score=30.58 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=38.9
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCcccc-ccC-hhHHHHHHHHHHHHHHHh
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELM-TGT-SEDLFDFIASALQQFVEK 159 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~g~-~~~LFd~IA~~i~~fl~~ 159 (432)
.|-+||+|-+++|+.+++..++....+....+..++-+.+. ++. .++=.+-..+++..|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 68899999999999999996443333443333344444432 121 244556666778777654
No 69
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=31.27 E-value=67 Score=30.96 Aligned_cols=33 Identities=24% Similarity=0.127 Sum_probs=24.8
Q ss_pred CcHHHHHHHHHHHcCCCceEEEEEechHHhhhccc
Q 014020 207 QEVTESLQRALDKRGLDMRVAALVNDTVGTLALGH 241 (432)
Q Consensus 207 ~dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~a 241 (432)
++.++.+.+++++.|++ +..++|..+|...+..
T Consensus 150 ~~~v~~~~~~~~~aGl~--~~~i~~ep~Aaa~~~~ 182 (377)
T 2ych_A 150 QEAVAGVLEALRGAGLV--PVVLDVKPFAGLYPLE 182 (377)
T ss_dssp HHHHHHHHHHHHHTTCE--EEEEEEHHHHTTGGGH
T ss_pred HHHHHHHHHHHHHCCCc--eEEEecchHHHHHHHH
Confidence 34567888888887754 5788999999877653
No 70
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=31.14 E-value=4.1e+02 Score=26.45 Aligned_cols=52 Identities=17% Similarity=0.049 Sum_probs=32.6
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechHHhhhcccccC-CcceEEEE-eecccceee
Q 014020 208 EVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHD-EDTVAAVI-IGTGTNACY 261 (432)
Q Consensus 208 dv~~lL~~al~r~~l~v~v~aivNDTVgTLla~ay~~-~~~~iGlI-lGTGtNacY 261 (432)
++++-+.+++++.|+++ ..++|...|.-.+....+ .+.-+.+| +|-||---.
T Consensus 168 ~~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdis 221 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSP--FQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLI 221 (419)
T ss_dssp HHHHHHHHHHHTTSCSC--EEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEE
T ss_pred HHHHHHHHHHHHcCCcE--EEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEE
Confidence 47788899999888765 567899888765432221 11224444 777765433
No 71
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=30.02 E-value=80 Score=24.59 Aligned_cols=36 Identities=8% Similarity=0.211 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 40 ~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356777777788999999999999999999999863
No 72
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=28.40 E-value=84 Score=24.50 Aligned_cols=36 Identities=11% Similarity=0.283 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 40 ~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 2o97_B 4 SQLIDKIAAGADISKAAAGRALDAIIASVTESLKEG 39 (90)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 366777777888999999999999999999999864
No 73
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=28.19 E-value=82 Score=24.78 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 40 ~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (94)
T 1p71_A 4 GELVDAVAEKASVTKKQADAVLTAALETIIEAVSSG 39 (94)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356666667778999999999999999999999864
No 74
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=28.12 E-value=84 Score=24.42 Aligned_cols=36 Identities=8% Similarity=0.221 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 40 ~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1b8z_A 4 KELIDRVAKKAGAKKKDVKLILDTILETITEALAKG 39 (90)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356666777778999999999999999999999864
No 75
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=27.71 E-value=1.3e+02 Score=31.08 Aligned_cols=63 Identities=21% Similarity=0.262 Sum_probs=42.7
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccc-cC-hhHHHHHHHHHHHHHHHhh
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMT-GT-SEDLFDFIASALQQFVEKE 160 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~-g~-~~~LFd~IA~~i~~fl~~~ 160 (432)
.|=|||+|-.++|..+++..++..+++.......++-+.+.. |. .++=.+-..+++..|...-
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999965444445444444555555432 22 3566777778888887653
No 76
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=27.30 E-value=82 Score=24.82 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 41 GVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 41 ~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
++++.+.+...++..+...+.+.|.+.|.+.|..+
T Consensus 8 eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g 42 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKEATVVVQTVVESITNTLAAG 42 (93)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56666666778999999999999999999999864
No 77
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=26.14 E-value=93 Score=24.80 Aligned_cols=35 Identities=6% Similarity=0.081 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 41 GVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 41 ~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 5 eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~g 39 (99)
T 3c4i_A 5 ELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKG 39 (99)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56666666778999999999999999999999864
No 78
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=25.01 E-value=1e+02 Score=24.53 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 40 ~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 6 ~eli~~ia~~~~ls~~~~~~vl~~~~~~i~~~L~~G 41 (99)
T 1owf_A 6 AEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENG 41 (99)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356667777778999999999999999999999863
No 79
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=22.36 E-value=73 Score=31.00 Aligned_cols=18 Identities=44% Similarity=0.606 Sum_probs=16.7
Q ss_pred cEEEEeeCCceeEEEEEE
Q 014020 98 IYYALDLGGTNFRVLRVQ 115 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~ 115 (432)
.++|+|=|.||||+-++.
T Consensus 7 ~~IavDWGTs~lRa~l~~ 24 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQ 24 (295)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred cEEEEEecchheeeeeec
Confidence 689999999999999886
No 80
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=22.16 E-value=1.5e+02 Score=28.96 Aligned_cols=63 Identities=10% Similarity=0.148 Sum_probs=40.6
Q ss_pred cEEEEeeCCceeEEEEEEEcCCc-ceeeeecceeecCCcccc-ccC-hhHHHHHHHHHHHHHHHhh
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQR-SSILSSDVERQPIPPELM-TGT-SEDLFDFIASALQQFVEKE 160 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~-~~~~~~~~~~~~Ip~~~~-~g~-~~~LFd~IA~~i~~fl~~~ 160 (432)
.|-+||+|-.++|+.+.++..++ ..++....+..++-+.+. ++. .++=.+-..+++..|...-
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI 82 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999996332 333433333344544442 122 3456677778888887654
No 81
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=21.07 E-value=1.4e+02 Score=23.27 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=30.6
Q ss_pred HHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhhcCC
Q 014020 40 MGVLRELEEG-CETTVSRLRQVVDAMAVEMHAGLASE 75 (432)
Q Consensus 40 ~~~l~~~~~~-f~~~~~~L~~i~~~f~~em~~GL~~~ 75 (432)
.++++.+.+. ..++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~~ls~~~~~~~l~~~~~~i~~~L~~g 40 (94)
T 1owf_B 4 SELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQG 40 (94)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3667777777 48999999999999999999999864
No 82
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=20.68 E-value=90 Score=32.23 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCccccEEEEe
Q 014020 51 ETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALD 103 (432)
Q Consensus 51 ~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlPTyv~~lPtG~E~G~fLAlD 103 (432)
.+|+..+++|.+-+.+++.+-.+.- .+.|++++..++|+..+ ..++|+|
T Consensus 23 ~is~~~~~~I~~~L~~~l~~~~~~~---~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 23 LLSKQSIERITKILLDELENVRENE---QIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTTCS---SHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred eccHhHHHHHHHHHHHHHHHHHhhh---chhhhhhhceECCCCCC-ceEEEec
Confidence 3899999999999999998887652 68899999999997644 4788888
No 83
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=20.04 E-value=94 Score=30.73 Aligned_cols=53 Identities=17% Similarity=0.316 Sum_probs=30.1
Q ss_pred cEEEEeeCCceeEEEEEEEcCCcceeeeecceeecCCccccccChhHHHHHHHHHHHHHH
Q 014020 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFV 157 (432)
Q Consensus 98 ~fLAlDlGGTNlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~g~~~~LFd~IA~~i~~fl 157 (432)
.++|+|=|.||||+-++.- + .++..+.. -+..++.....++-+-+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~--~-g~vl~~~~----~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGE--D-GAVLAERR----SAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECT--T-SCEEEEEE----ESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecC--C-CCchhhhc----CCcchhhcCcccHHHHHHHHHHHhh
Confidence 6999999999999988733 2 23444322 3443433333334444455555543
Done!