BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014023
         (432 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/431 (91%), Positives = 412/431 (95%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT  ERQDLKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 107 MCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTS 166

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            GV YSFGSNSSGQLGHGTTEEEWRPR IRSLQGIRIIQAAAG GRTMLISDAG+VYAFG
Sbjct: 167 NGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGEVYAFG 226

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYGVQGTK VT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND +
Sbjct: 227 KDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDGK 286

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEPNDV PHPLLG LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 287 LGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 346

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQFQLLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 347 SRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 406

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV AL+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGHN   DGQGNRH NVL
Sbjct: 407 VPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVL 466

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLK+V ERVVQISLTNS+YWNAHTFALTESGKL+AFGAGDKGQLG+ELVNNQTE
Sbjct: 467 SPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGMELVNNQTE 526

Query: 421 RGNPERVDIDL 431
           RGNPE+VD+DL
Sbjct: 527 RGNPEQVDVDL 537


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/436 (91%), Positives = 418/436 (95%), Gaps = 5/436 (1%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT  ER+DLKQ+CGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS
Sbjct: 103 MCQKRAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KGVVYSFGSNSSGQLGHG TEEEWRPR IRSLQGIRIIQAAAG GRTMLISDAGQVYAFG
Sbjct: 163 KGVVYSFGSNSSGQLGHGNTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 223 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 282

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEP DVEPHPLLG LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 342

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQFQLLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 343 SRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 402

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQGNRH 356
           VPKVV AL+++KA+HVATGDYTTFVVSE+GDVYSFGCGESASLGH     A ADGQG RH
Sbjct: 403 VPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGCGESASLGHNAAAAANADGQG-RH 461

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ANVL+P+LVTSLK+VNERVVQISLTNSIYWNAHTFALT+SGKLYAFGAGDKGQLG ELVN
Sbjct: 462 ANVLSPELVTSLKEVNERVVQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVN 521

Query: 417 NQTERGNPERVDIDLS 432
           NQTERGNPERVDIDLS
Sbjct: 522 NQTERGNPERVDIDLS 537


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/432 (89%), Positives = 414/432 (95%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KRAIF+PM   ER+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT 
Sbjct: 103 MCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTV 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFG
Sbjct: 163 KGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+
Sbjct: 223 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 282

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 342

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +RTDEKHPRLIEQF++LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 343 TRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 402

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGES+SLGHN   DGQGNRHAN+L
Sbjct: 403 VPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANIL 462

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLKQ+ ER+VQISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTE
Sbjct: 463 SPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVANQTE 522

Query: 421 RGNPERVDIDLS 432
           RGNPERVDIDLS
Sbjct: 523 RGNPERVDIDLS 534


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/432 (89%), Positives = 414/432 (95%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KRAIF+PM   ER+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT 
Sbjct: 95  MCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTV 154

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFG
Sbjct: 155 KGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFG 214

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+
Sbjct: 215 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 274

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 275 LGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 334

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +RTDEKHPRLIEQF++LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 335 TRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 394

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGES+SLGHN   DGQGNRHAN+L
Sbjct: 395 VPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANIL 454

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLKQ+ ER+VQISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTE
Sbjct: 455 SPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVANQTE 514

Query: 421 RGNPERVDIDLS 432
           RGNPERVDIDLS
Sbjct: 515 RGNPERVDIDLS 526


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/432 (89%), Positives = 415/432 (96%), Gaps = 1/432 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT  +RQDLK +CGGSWKL LR+L+AGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 103 MCQKRAIFKPMTTEQRQDLKLRCGGSWKLALRYLMAGEACCRREKSQAIAGPGHSIAVTS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KGVVYSFGSNSSGQLGHGTT+EEWRPRPIR+LQGIRIIQAAAGAGRTML+SD+GQVYAFG
Sbjct: 163 KGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYGVQG+K V +PQ+VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 223 KDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 282

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGHHT+ +DVEPHPLLG LENIPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 342

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQF LLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 343 SRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 402

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANV 359
           VPKVV+AL++VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGHNA   D QGNRHANV
Sbjct: 403 VPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANV 462

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           L+P+LVTSLKQ+NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV NQT
Sbjct: 463 LSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQT 522

Query: 420 ERGNPERVDIDL 431
           ERGNPERV+IDL
Sbjct: 523 ERGNPERVEIDL 534


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/431 (88%), Positives = 409/431 (94%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KRAIFKPMT  ERQDLKQ+CGGSWKLVLR+LLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 104 MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTS 163

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFGSNSSGQLGHGTTEEEWRP+PIR+LQGIRIIQAAAGAGRTMLI+D+GQVYAFG
Sbjct: 164 KGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFG 223

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYG QG+K V +P+LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 224 KDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 283

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGHHT+ ND+EPHPLLG LE+IPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 343

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +RTDEK PRLIEQFQ LNLQP+V++AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+
Sbjct: 344 TRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA 403

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            PKVV AL +VKA+HVATGDYTTFVV+EDGDVYSFGCGESASLGHNA+ D +GNRHANVL
Sbjct: 404 APKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVL 463

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P+LVTSLKQ+NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTE
Sbjct: 464 NPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 523

Query: 421 RGNPERVDIDL 431
           R NPE+VDIDL
Sbjct: 524 RVNPEQVDIDL 534


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/431 (88%), Positives = 409/431 (94%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KRAIFKPMT  ERQDLKQ+CGGSWKLVLR+LLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 1   MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTS 60

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFGSNSSGQLGHGTTEEEWRP+PIR+LQGIRIIQAAAGAGRTMLI+D+GQVYAFG
Sbjct: 61  KGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFG 120

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYG QG+K V +P+LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 121 KDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 180

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGHHT+ ND+EPHPLLG LE+IPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 181 LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 240

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +RTDEK PRLIEQFQ LNLQP+V++AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+
Sbjct: 241 TRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA 300

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            PKVV AL +VKA+HVATGDYTTFVV+EDGDVYSFGCGESASLGHNA+ D +GNRHANVL
Sbjct: 301 APKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVL 360

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P+LVTSLKQ+NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTE
Sbjct: 361 NPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 420

Query: 421 RGNPERVDIDL 431
           R NPE+VDIDL
Sbjct: 421 RVNPEQVDIDL 431


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/426 (89%), Positives = 408/426 (95%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KRAIF+PM   ER+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT 
Sbjct: 105 MCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTV 164

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFG
Sbjct: 165 KGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFG 224

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+
Sbjct: 225 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 284

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 285 LGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 344

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +RTDEKHPRLIEQFQ+LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 345 TRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 404

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGES+SLGHN   DGQGNRHAN+L
Sbjct: 405 VPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANIL 464

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLKQ+ ER+VQISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTE
Sbjct: 465 SPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVXNQTE 524

Query: 421 RGNPER 426
           RGNPER
Sbjct: 525 RGNPER 530


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/432 (87%), Positives = 407/432 (94%), Gaps = 6/432 (1%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT  +RQDLK +CGGSWKLVLR+L+AGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 103 MCQKRAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGEACCRREKSQAIAGPGHSIAVTS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG+VYSFGSNSSGQLGHGTTEEEWRPRPIR+LQGIRIIQAAAGAGRTML+SD+GQVYAFG
Sbjct: 163 KGIVYSFGSNSSGQLGHGTTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
                EAEYGVQG+K V +PQ+VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 223 -----EAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDEK 277

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGHHT+ +DVEPHPLLG LENIPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 278 LGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 337

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDE++PRLIEQF LLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 338 SRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 397

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANV 359
           VPKVV+AL++VKA+HVATGDYTTFVVS+DGDVYSFGCG+SASLGHNA   D QGNRHA V
Sbjct: 398 VPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKV 457

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           L P+LVTSLKQ+NERVVQISLTN  YWNAHTFALTESGKLYAFGAGDKGQLGIELV NQT
Sbjct: 458 LDPELVTSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQT 517

Query: 420 ERGNPERVDIDL 431
           ERGNPERV+IDL
Sbjct: 518 ERGNPERVEIDL 529


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/432 (84%), Positives = 401/432 (92%), Gaps = 1/432 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT+ ER+  KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 9   MCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 68

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 69  SGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 128

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGE EY  QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYTFSWGND +
Sbjct: 129 KDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMK 188

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 189 LGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 248

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 249 SRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 308

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV++L +V+A+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G  NRH NVL
Sbjct: 309 VPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN-NRHTNVL 367

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLK+ NERV QISLTNSIYWNAHTFALT+SGKLYAFGAGDKGQLG ELV  ++E
Sbjct: 368 SPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESE 427

Query: 421 RGNPERVDIDLS 432
           RG PERV+IDLS
Sbjct: 428 RGTPERVEIDLS 439


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/432 (84%), Positives = 401/432 (92%), Gaps = 1/432 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT+ ER+  KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 104 MCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 163

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 GGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGE EY  QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYTFSWGND +
Sbjct: 224 KDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMK 283

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 SRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 403

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV++L +V+AIHVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G  NRH NVL
Sbjct: 404 VPKVVESLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN-NRHTNVL 462

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLK+ NERV QISLTNSIYWNAHTFALT+SGKLYAFGAGDKGQLG ELV  Q+E
Sbjct: 463 SPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQQSE 522

Query: 421 RGNPERVDIDLS 432
           RG PERV+IDLS
Sbjct: 523 RGTPERVEIDLS 534


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/432 (84%), Positives = 401/432 (92%), Gaps = 1/432 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPMT+ ER+  KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 104 MCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 163

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 SGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGE EY  QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYTFSWGND +
Sbjct: 224 KDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMK 283

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 SRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 403

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV++L +V+A+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G  NRH NVL
Sbjct: 404 VPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN-NRHTNVL 462

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLK+ NERV QISLTNSIYWNAHTFALT+SGKLYAFGAGDKGQLG ELV  ++E
Sbjct: 463 SPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESE 522

Query: 421 RGNPERVDIDLS 432
           RG PERV+IDLS
Sbjct: 523 RGTPERVEIDLS 534


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  770 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/433 (85%), Positives = 400/433 (92%), Gaps = 2/433 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC+KRAIFKPMT  + + +KQ+CGGSWKLVLRFL+AGE+CCRRE S AIAGPGHSIAVTS
Sbjct: 103 MCRKRAIFKPMTPEQHEAMKQRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFGSNSSGQLGHGTTEE+  PR IRSLQGIRIIQAAAG GRTMLISDAG VYAFG
Sbjct: 163 KGAVYSFGSNSSGQLGHGTTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYG QG ++VT+P+LVESLK+IFVVQAAIGNFFTAVLSREG VYTFSWG D+R
Sbjct: 223 KDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSR 282

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGHHTEPND+EP PL G LENIPVVQIAAGYCYLLALAC PSGM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHG 342

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNE+CES
Sbjct: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCES 402

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI-ADGQGNRHANV 359
            PKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGHN +  + +GNR  +V
Sbjct: 403 SPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHV 462

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           L P+LV SLKQ++ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL  NQT
Sbjct: 463 LKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELA-NQT 521

Query: 420 ERGNPERVDIDLS 432
           ERGNPE VDIDL+
Sbjct: 522 ERGNPELVDIDLN 534


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/432 (84%), Positives = 398/432 (92%), Gaps = 1/432 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KRAIFK MT  ER+  KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 104 MCHKRAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 163

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGSN+SGQLGH   EEEWRPRPIRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 SGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGE EYGVQG+++VT+PQ+VESLK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +
Sbjct: 224 KDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMK 283

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 SRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECES 403

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+AL  VKA+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G  NRH+NVL
Sbjct: 404 VPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIIEGN-NRHSNVL 462

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSLK+ NERVVQ+SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG ELV  Q E
Sbjct: 463 SPELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGTELVAQQNE 522

Query: 421 RGNPERVDIDLS 432
           RG PERV+IDLS
Sbjct: 523 RGAPERVEIDLS 534


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/432 (83%), Positives = 396/432 (91%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTS
Sbjct: 101 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTS 160

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VY+FG N+SGQLGHG TE+E R +P+RSLQG+RIIQAAAGA RTMLISD G+VYA G
Sbjct: 161 KGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACG 220

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K+SFGEAEYG QGTK VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 221 KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 280

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TE  DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 281 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 340

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PR+IEQFQ+LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 341 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 400

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+ L+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+   D QGNRHANVL
Sbjct: 401 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVL 460

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P +VTSLKQVNER+VQISLTNSIYWNAHTFALTESGKL+AFGAGD+GQLG EL  NQ E
Sbjct: 461 SPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKE 520

Query: 421 RGNPERVDIDLS 432
           R  PE+VDIDLS
Sbjct: 521 RCVPEKVDIDLS 532


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/432 (83%), Positives = 396/432 (91%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTS
Sbjct: 1   MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTS 60

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VY+FG N+SGQLGHG TE+E R +P+RSLQG+RIIQAAAGA RTMLISD G+VYA G
Sbjct: 61  KGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACG 120

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K+SFGEAEYG QGTK VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 121 KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 180

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TE  DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 181 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 240

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PR+IEQFQ+LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 241 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+ L+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+   D QGNRHANVL
Sbjct: 301 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVL 360

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P +VTSLKQVNER+VQISLTNSIYWNAHTFALTESGKL+AFGAGD+GQLG EL  NQ E
Sbjct: 361 SPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKE 420

Query: 421 RGNPERVDIDLS 432
           R  PE+VDIDLS
Sbjct: 421 RCVPEKVDIDLS 432


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/432 (84%), Positives = 395/432 (91%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHSIAVTS
Sbjct: 102 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSIAVTS 161

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VY+FG N+SGQLGHG TEE+ R +P+RSLQGIRIIQAAAGA RTMLISD G+VYA G
Sbjct: 162 KGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVYACG 221

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K+SFGEAEYG QGT+ VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 222 KESFGEAEYGGQGTQPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 281

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TE  DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 282 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 341

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           SRTDEK+PR+IEQF++LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 342 SRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 401

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+ LN VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+   D QGNRHANVL
Sbjct: 402 VPKVVEGLNHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVL 461

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P +VTSLKQ NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD+GQLG EL  N+ E
Sbjct: 462 SPAVVTSLKQANERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDQGQLGAELDRNRKE 521

Query: 421 RGNPERVDIDLS 432
           R  PE+VDIDLS
Sbjct: 522 RCVPEKVDIDLS 533


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/432 (81%), Positives = 398/432 (92%), Gaps = 1/432 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPM+  ER+  KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAV++
Sbjct: 104 MCQKRAIFKPMSTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVST 163

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G  Y+FGSN+SGQLGH + EEEWRPRP+RSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 SGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGE E+G QG++ V +PQ+VESLK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +
Sbjct: 224 KDSFGEVEFGNQGSRAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMK 283

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +RTDEK+PRLIEQFQ LN+QP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 TRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 403

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+AL+ VKA++VATGDYTTF+VS  GDVYSFGCGES+SLGHN   +G  NRH+NVL
Sbjct: 404 VPKVVEALSSVKAVYVATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGN-NRHSNVL 462

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P+LVTSL+  NE+VVQ+SLTNS+YWNAHTFALTESGKLYAFGAGDKGQLG ELV+ ++E
Sbjct: 463 SPELVTSLQSKNEKVVQVSLTNSVYWNAHTFALTESGKLYAFGAGDKGQLGSELVSQESE 522

Query: 421 RGNPERVDIDLS 432
           RG PERV+IDLS
Sbjct: 523 RGTPERVEIDLS 534


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/431 (80%), Positives = 383/431 (88%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIF PMT  +RQ LKQ+CGGSWKLVLRFLLAGEAC RRE SQ IAGPGHSIAVTS
Sbjct: 103 MCQKRAIFNPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACYRREKSQVIAGPGHSIAVTS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KGVVYSFGSNSSGQLGHGTTE+ W+PRPIR+LQGIRIIQA A  GRTMLISD+GQVYAFG
Sbjct: 163 KGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K  F E E G +G+K+VT+PQLVESLKNIFVVQAAIGN+FTAVLSREGRVYTFSWG+D +
Sbjct: 223 KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGSDGK 282

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           L H T+PNDVEP PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCG+GGKLGHG
Sbjct: 283 LCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHG 342

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           + TDEK+PRLIEQFQLLNLQP+V+AAG+WHAAVVGQDGRVCTWGWGR+GCLGHGNEEC  
Sbjct: 343 TETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECAL 402

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VPKVV+ L +VKA+HVA GDYTTFVVS+ GD YSFG GES +LGH+     Q + HA+VL
Sbjct: 403 VPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVL 462

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           TP+LVTS+KQ  ERV+QISLTNS+YW AHTFALTESGKLYAFGAGDKGQLG+EL   QTE
Sbjct: 463 TPKLVTSMKQNYERVIQISLTNSVYWIAHTFALTESGKLYAFGAGDKGQLGVELRPYQTE 522

Query: 421 RGNPERVDIDL 431
           R  P+RVDIDL
Sbjct: 523 RRKPQRVDIDL 533


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/433 (80%), Positives = 386/433 (89%), Gaps = 2/433 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQAIAGPGHSIAVT 59
           MCQKRAIFKPMT  +RQ LKQ+CGGSWKLVLRFLLAGEACCRR E SQ IAGPGHSIAVT
Sbjct: 106 MCQKRAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKSQVIAGPGHSIAVT 165

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           SKGVVYSFGSNSSGQLGHGTTE+ W+PRPIR+LQGIRIIQA A  GRTMLISD+GQ Y F
Sbjct: 166 SKGVVYSFGSNSSGQLGHGTTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAYVF 225

Query: 120 GKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           GK+SFGE E  V +G+K+VT+PQLVESLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG  
Sbjct: 226 GKESFGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCV 285

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +L H T+ NDVEP PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLG
Sbjct: 286 GKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLG 345

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           HG++T+E++PRLIEQFQLLNLQP+ +AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEEC
Sbjct: 346 HGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEEC 405

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           E VPKVV+ L +VKA+HVATGD+TTFVVS+ GDVYSFG GES SLGH      Q + H N
Sbjct: 406 ELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHEN 465

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           VLTP+LVT +KQ+NERVVQISLTN IYWNAHTFALTESGKLYAFGAGDKGQLG+EL  +Q
Sbjct: 466 VLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGVELGAHQ 525

Query: 419 TERGNPERVDIDL 431
           TE+G PERVDIDL
Sbjct: 526 TEKGKPERVDIDL 538


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/433 (80%), Positives = 386/433 (89%), Gaps = 2/433 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQAIAGPGHSIAVT 59
           MCQKRAIFKPMT  +RQ LKQ+CGGSWKLVLRFLLAGEACCRR E SQ IAGPGHSIAVT
Sbjct: 102 MCQKRAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKSQVIAGPGHSIAVT 161

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           SKGVVYSFGSNSSGQLGHGTTE+ W+PRPIR+LQGIRIIQA A  GRTMLISD+GQ Y F
Sbjct: 162 SKGVVYSFGSNSSGQLGHGTTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAYVF 221

Query: 120 GKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           GK+SFGE E  V +G+K+VT+PQLVESLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG  
Sbjct: 222 GKESFGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCV 281

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +L H T+ NDVEP PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLG
Sbjct: 282 GKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLG 341

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           HG++T+E++PRLIEQFQLLNLQP+ +AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEEC
Sbjct: 342 HGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEEC 401

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           E VPKVV+ L +VKA+HVATGD+TTFVVS+ GDVYSFG GES SLGH      Q + H N
Sbjct: 402 ELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHEN 461

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           VLTP+LVT +KQ+NERVVQISLTN IYWNAHTFALTESGKLYAFGAGDKGQLG+EL  +Q
Sbjct: 462 VLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGVELGAHQ 521

Query: 419 TERGNPERVDIDL 431
           TE+G PERVDIDL
Sbjct: 522 TEKGKPERVDIDL 534


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/433 (74%), Positives = 374/433 (86%), Gaps = 1/433 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC++RAIF+PMT  ER+ LK+ CGGSWKLVLRFL AGE C RRE  QAIAGPGHSI VT 
Sbjct: 107 MCKRRAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRREKIQAIAGPGHSIVVTK 166

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGS+SSGQLGHG+ +EEWRPR +RSLQG+RIIQA AG GRTMLISD G+VYAFG
Sbjct: 167 TGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAGVGRTMLISDTGRVYAFG 226

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFG+ EYG  G+K + +PQ+VESL  IFVVQAAIGNFFTAVLSREGRVYTFSWG DA+
Sbjct: 227 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 286

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEP D +P  L G LEN PVVQIAAGYCYLLAL CQ +GMAVYSVGCGLGGKLGHG
Sbjct: 287 LGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHG 346

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +R+DE+ P++IE FQ L LQP+ VAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNE+CE 
Sbjct: 347 TRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCEL 406

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH-NAIADGQGNRHANV 359
           +PKVV++L  VKA+HVATGDYTTFVV++ G+V+S GCGES+SLGH +   +GQ NRHANV
Sbjct: 407 LPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANV 466

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           L P+LV+SLKQ NE+V+QISLTNS+ WNAHTFAL +SG+L+AFGAGDKGQLG EL++N++
Sbjct: 467 LRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGDKGQLGTELLDNES 526

Query: 420 ERGNPERVDIDLS 432
           ERG PE VDIDLS
Sbjct: 527 ERGTPELVDIDLS 539


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/433 (74%), Positives = 374/433 (86%), Gaps = 1/433 (0%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC++RAIF+PMT  ER+ LK+ CGGSWKLVLRFL AGE C RRE  QAIAGPGHSI VT 
Sbjct: 76  MCKRRAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRREKIQAIAGPGHSIVVTK 135

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGS+SSGQLGHG+ +EEWRPR +RSLQG+RIIQA AG GRTMLISD G+VYAFG
Sbjct: 136 TGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAGVGRTMLISDTGRVYAFG 195

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFG+ EYG  G+K + +PQ+VESL  IFVVQAAIGNFFTAVLSREGRVYTFSWG DA+
Sbjct: 196 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 255

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH TEP D +P  L G LEN PVVQIAAGYCYLLAL CQ +GMAVYSVGCGLGGKLGHG
Sbjct: 256 LGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHG 315

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +R+DE+ P++IE FQ L LQP+ VAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNE+CE 
Sbjct: 316 TRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCEL 375

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH-NAIADGQGNRHANV 359
           +PKVV++L  VKA+HVATGDYTTFVV++ G+V+S GCGES+SLGH +   +GQ NRHANV
Sbjct: 376 LPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANV 435

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           L P+LV+SLKQ NE+V+QISLTNS+ WNAHTFAL +SG+L+AFGAGDKGQLG EL++N++
Sbjct: 436 LRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGDKGQLGTELLDNES 495

Query: 420 ERGNPERVDIDLS 432
           ERG PE VDI+LS
Sbjct: 496 ERGTPELVDINLS 508


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 293/436 (67%), Positives = 342/436 (78%), Gaps = 12/436 (2%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           +CQKRAIFK M E ERQ++K++CGGSWKLVL+FLLAGE  CRRE SQA+AGPGHSIAVTS
Sbjct: 115 ICQKRAIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCRREKSQALAGPGHSIAVTS 174

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KGVVYSFG N SGQLG GTT++ W+P P+RSL GIRIIQAA    RT +ISDAG+VYAFG
Sbjct: 175 KGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFVISDAGEVYAFG 234

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K  F EA+  V  TKL+T+PQ V+SL  IFVVQAAIGN+FTA+LSREGRVYT SWGND R
Sbjct: 235 KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAILSREGRVYTLSWGNDER 294

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV---GCGLGGKL 237
           LGH T+ +   P PLLG LENIPVVQIAAG+CYLLALA QP+GM+VYSV     G  G  
Sbjct: 295 LGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTGMSVYSVGCGLGGKLGHG 354

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
              S   EK+PRLI++F LLN++PV+V+AG WHAAVVG+DGRVCTWGWGR+GCLGHG EE
Sbjct: 355 LSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVCTWGWGRFGCLGHGTEE 414

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
            E+ PKVV  L DVKA+HVATG YTTFVVS+DG VYSFG G  A+LG + + +       
Sbjct: 415 AENAPKVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFGSG-GANLGQDDVDE------- 466

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
           N LTP+LV+SLK   ER+V +SLTNS     HTFA+TESG LYAFGAG++GQLG+EL  N
Sbjct: 467 NTLTPKLVSSLKDTKERMVHVSLTNSGNGTGHTFAMTESGTLYAFGAGNRGQLGVELGEN 526

Query: 418 QTERGNPERVD-IDLS 432
            TER  P +V  IDLS
Sbjct: 527 LTERAEPAKVAGIDLS 542


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/438 (57%), Positives = 324/438 (73%), Gaps = 15/438 (3%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKR +FK M + +++ LKQ+CGGSWK VL+++L  E    +  S+ IAGPGHSI ++S
Sbjct: 107 MCQKRTMFKLMKQEDQECLKQRCGGSWKHVLKYILVRE----KNGSRVIAGPGHSIVISS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VYSFG+N SGQLG G +E+ +RP  IRSLQGIRI QAA G+  TML+SD G VYAFG
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFRPCIIRSLQGIRITQAAVGSRWTMLVSDTGSVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KD+F  AE        +T+P++VESLK +FVVQAAIG +F+AVLSREGRVYTFSWG + R
Sbjct: 223 KDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKEER 282

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH ++P+DVEP  LL  LE++PV  I+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHSSDPSDVEPR-LLSGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHG 341

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
            +T++  P+LIEQFQ L+ +PV +AAG WHAA +G DGRVCTWGWG  GCLGHG+EE ++
Sbjct: 342 CKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKA 401

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VP +V+ L DVKA+H++TG+YTTFVV+E+GDVYSFG GES         D +     +  
Sbjct: 402 VPTLVEGLRDVKAVHLSTGEYTTFVVAENGDVYSFGSGESLVFQE----DDEAEEGPDFS 457

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIEL 414
           TP +V+SLK +N++VVQIS TN+ YW      + HTFA+ +SG L AFG G +GQLG++L
Sbjct: 458 TPSIVSSLKALNKKVVQISPTNASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQLGVKL 517

Query: 415 VNNQTERGNPERVDIDLS 432
           +    +   P  V I L+
Sbjct: 518 LEGVEKVSVPMHVPIVLN 535


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/437 (58%), Positives = 314/437 (71%), Gaps = 13/437 (2%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KR + K M + ER+ LKQ+CGGSWKLVL++++A E    R  S+ +AGPGHSI VT+
Sbjct: 204 MCHKRPMVKLMAQQEREQLKQRCGGSWKLVLKYIVARE----RNYSRIVAGPGHSIVVTT 259

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG  YSFG+N  GQLG G TE+ ++P  IRSLQGI+I QAA G+ +TML+SD G VYAFG
Sbjct: 260 KGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYAFG 319

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K SF   E        +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG   R
Sbjct: 320 KGSFVWEELS-DAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTER 378

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH ++P+DVEP  L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 379 LGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHG 438

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
            + ++   +LIE F  L+  PV VAAG WHAA +G DGRVCTWGWG  GCLGHG+EE   
Sbjct: 439 CKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRV 498

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +P VVQ L++VKA+HV+TG+YTTFVVS++GD YSFG  ES ++G     +   +   +  
Sbjct: 499 LPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS-- 556

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIEL 414
           TP LV SLK +N++ VQIS TNS YW        HTFAL ESGKLYAFG G KGQLG++L
Sbjct: 557 TPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKL 616

Query: 415 VNNQTERGNPERVDIDL 431
              Q    NPERV IDL
Sbjct: 617 SEGQERAQNPERVPIDL 633


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/437 (58%), Positives = 313/437 (71%), Gaps = 13/437 (2%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KR + K M + ER+ LKQ+CGGSWKLV ++++A E    R  S+ +AGPGHSI VT+
Sbjct: 179 MCHKRPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTT 234

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG  YSFG+N  GQLG G TE+ ++P  IRSLQ I+I QAA G+ +TML+SD G VYAFG
Sbjct: 235 KGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFG 294

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K SF   E        +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG   R
Sbjct: 295 KGSFVWEELS-DAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTER 353

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH ++P+DVEP  L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 354 LGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHG 413

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
            + ++  P+LIE F  L+  PV VAAG WHAA +G DGRVCTWGWG  GCLGHG+EE   
Sbjct: 414 CKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRV 473

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +P VVQ L++VKA+HV+TG+YTTFVVS++GD YSFG  ES ++G     +   +   +  
Sbjct: 474 LPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS-- 531

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIEL 414
           TP LV SLK +N++ VQIS TNS YW        HTFAL ESGKLYAFG G KGQLG++L
Sbjct: 532 TPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKL 591

Query: 415 VNNQTERGNPERVDIDL 431
              Q    NPERV IDL
Sbjct: 592 SEGQERAQNPERVPIDL 608


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/437 (58%), Positives = 313/437 (71%), Gaps = 13/437 (2%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MC KR + K M + ER+ LKQ+CGGSWKLV ++++A E    R  S+ +AGPGHSI VT+
Sbjct: 107 MCHKRPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTT 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG  YSFG+N  GQLG G TE+ ++P  IRSLQ I+I QAA G+ +TML+SD G VYAFG
Sbjct: 163 KGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFG 222

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           K SF   E        +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG   R
Sbjct: 223 KGSFVWEELS-DAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTER 281

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH ++P+DVEP  L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 282 LGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHG 341

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
            + ++  P+LIE F  L+  PV VAAG WHAA +G DGRVCTWGWG  GCLGHG+EE   
Sbjct: 342 CKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRV 401

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +P VVQ L++VKA+HV+TG+YTTFVVS++GD YSFG  ES ++G     +   +   +  
Sbjct: 402 LPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS-- 459

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIEL 414
           TP LV SLK +N++ VQIS TNS YW        HTFAL ESGKLYAFG G KGQLG++L
Sbjct: 460 TPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKL 519

Query: 415 VNNQTERGNPERVDIDL 431
              Q    NPERV IDL
Sbjct: 520 SEGQERAQNPERVPIDL 536


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/439 (56%), Positives = 320/439 (72%), Gaps = 17/439 (3%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKR +FK M + +++ LKQ+CGGSWK VL ++L  E    +  S+ IAGPGHSI +TS
Sbjct: 107 MCQKRTMFKQMKQEDQECLKQRCGGSWKHVLGYILVRE----KNGSRVIAGPGHSIIITS 162

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VYSFG+N SGQLG G +E+ ++P  IRSLQGIRI QAA G+  TML+SD G VY+FG
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRCTMLVSDTGSVYSFG 222

Query: 121 KDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           K+ F  AE  V G    +T+P++ ESLK +FVVQAAIG +F+AVLSREGRVYTFSWG   
Sbjct: 223 KEDFRVAEL-VDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKAE 281

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           RLGH ++P+DVEP  LL  LE++PV  I+AG CYLL LA QP+GM+VYSVGCGLGGKLGH
Sbjct: 282 RLGHSSDPSDVEPR-LLPGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGH 340

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G +T+   P+L+EQFQ ++ +PV +AAG WHA  +G DGRVCTWGWG  GCLGHG+EEC 
Sbjct: 341 GCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDEECR 400

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           +VP VV+ L DVKA+HV+TG+YTTFVV+E+GDVYSFG GES +       D +     + 
Sbjct: 401 AVPTVVEGLRDVKAVHVSTGEYTTFVVAENGDVYSFGSGESLAFQ----LDDEAEEEPDS 456

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIE 413
            TP +V+SLK +N++VVQIS TN+ YW      + HTFA+ +SG + AFG G +GQLG++
Sbjct: 457 STPSIVSSLKDLNKKVVQISHTNASYWMNSEMGHPHTFAVMDSGDVCAFGGGVRGQLGVK 516

Query: 414 LVNNQTERGNPERVDIDLS 432
           L     +   P  V I L+
Sbjct: 517 LHEGVEKVRVPMNVPIGLN 535


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/437 (56%), Positives = 314/437 (71%), Gaps = 11/437 (2%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQ+RA+FKPM   E++ LKQ+CGGSWKLVLR++L GE   RRE SQ IAGPGHSI VT+
Sbjct: 107 MCQERAMFKPMKPKEKEWLKQRCGGSWKLVLRYILVGEKNYRREKSQVIAGPGHSIVVTA 166

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           KG VYSFG N SGQLG G  E +++P  I SLQGIRI QAA G  RTML+SD G VY FG
Sbjct: 167 KGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGIRITQAAVGLRRTMLVSDTGSVYTFG 226

Query: 121 KDSFGEAE-YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
            D+FG  + YG      V SP+L+ESLK +FVVQA+IG +F+AVLSREGRVYTFSWG   
Sbjct: 227 LDTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAE 286

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           RLGH +E +DVEP  L G L+++ V QIAAG CYLL L+  P+GM+VYS+GCGLGGKLGH
Sbjct: 287 RLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGH 346

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EEC 298
           G++  E  P+LI  FQ  N++P+ ++AGAWHAAV+ +DGRV TWGW   GCLGHG+ E+C
Sbjct: 347 GNKDFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDC 406

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            ++P+ V+ LN+VKA+HV+ G++ TFVV+++GDVYSFG   S +LG           + +
Sbjct: 407 VTLPRAVEGLNNVKAVHVSAGEWCTFVVADNGDVYSFGFRGSHNLGFQ----DNDAENED 462

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLGIE 413
           VL P+  T L  +NER VQIS T++  WN      HT AL ESG +YAFG G  GQLG++
Sbjct: 463 VLPPKPATLLADLNERFVQISPTSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGVK 522

Query: 414 LVNNQTERGNPERVDID 430
           LV  +     P +V ID
Sbjct: 523 LVEGKEAMPTPVQVAID 539


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/443 (54%), Positives = 305/443 (68%), Gaps = 22/443 (4%)

Query: 2   CQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK 61
           C ++AIFK M + E+  LKQ+CGGSWKLVL +LL GE    R  S+ +AGPGH+IAVTSK
Sbjct: 95  CCQKAIFKSMEQKEKDSLKQRCGGSWKLVLTYLLVGEKNYHRGKSRVVAGPGHTIAVTSK 154

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G VYSFG+NSSGQLG G TEE+ +P  IRSLQGIRI QAA G+ RTML+SD G VY FG+
Sbjct: 155 GDVYSFGANSSGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRRTMLVSDTGSVYVFGQ 214

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           D F   E+    T   +SP++VESLK IFVVQA++G  F+AVLSREG+VYTF WG+DARL
Sbjct: 215 DIFAGLEFAGDYT---SSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWGHDARL 271

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           GHH++P D+EP  L    ++  V+QIAAG CYLL L  QP+GM+VYSVGCG GGKLGHG 
Sbjct: 272 GHHSDPTDLEPRLLSVPPKDALVMQIAAGNCYLLMLVYQPTGMSVYSVGCGEGGKLGHGC 331

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-GRYGCLGHGN-EECE 299
                 PR+I+QF+ L ++PV V+AGA+H AV+  DGRV TWGW    GCLGH + +E  
Sbjct: 332 TISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLGHDDKQEYV 391

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            +P  V  L  VKA +++TG  +TFVV+++GDVYSFGC  S +LG  A      +   +V
Sbjct: 392 VLPTAVAGLGSVKATYISTGYCSTFVVTDNGDVYSFGCDHSRNLGVKA------DVGEDV 445

Query: 360 LTPQLVTSLK-QVNERVVQISLTNSIYW----------NAHTFALTESGKLYAFGAGDKG 408
             P+L  +L   +NE+VVQIS TN+  W            HT  LTESG+LY+ G G +G
Sbjct: 446 RIPKLAANLNVSLNEKVVQISATNTWDWPSRSQNRITSECHTCVLTESGRLYSLGRGSEG 505

Query: 409 QLGIELVNNQTERGNPERVDIDL 431
           QLG++L   Q  R  P+ V IDL
Sbjct: 506 QLGVKLAEGQKIRPAPDGVAIDL 528


>gi|224118330|ref|XP_002317792.1| predicted protein [Populus trichocarpa]
 gi|222858465|gb|EEE96012.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/224 (90%), Positives = 210/224 (93%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
           MCQKRAIFKPM   ERQDLKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 97  MCQKRAIFKPMAPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTS 156

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VYSFGSNSSGQLGHGTTEEEWRPR IRSL+GIRIIQAAAG GRTMLISDAG+VYAFG
Sbjct: 157 NGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRIIQAAAGPGRTMLISDAGRVYAFG 216

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           KDSFGEAEYG QG+K+VT+PQLVESLKNIFVVQA IGNFFTAVLSREGRVYTFSWGND R
Sbjct: 217 KDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGNDGR 276

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +GH TEPNDVEPHPLLG LENIPVVQIAAGYCYLLALAC PSG+
Sbjct: 277 IGHQTEPNDVEPHPLLGALENIPVVQIAAGYCYLLALACHPSGI 320



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 13/155 (8%)

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
           AG  H+  V  +G V ++G    G LGHG  E E  P+ +++L  ++ I  A G   T +
Sbjct: 146 AGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRIIQAAAGPGRTML 205

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           +S+ G VY+FG     S G  A    QG++   V TPQLV SLK        I +  ++ 
Sbjct: 206 ISDAGRVYAFG---KDSFGE-AEYGAQGSKM--VTTPQLVESLK-------NIFVVQAVI 252

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            N  T  L+  G++Y F  G+ G++G +   N  E
Sbjct: 253 GNFFTAVLSREGRVYTFSWGNDGRIGHQTEPNDVE 287



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           S  AVYS G    G+LGHG+  +E  PR I   + + +  +  AAG     ++   GRV 
Sbjct: 156 SNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRI--IQAAAGPGRTMLISDAGRVY 213

Query: 282 TWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            +G   +G   +G +  + V  P++V++L ++  +    G++ T V+S +G VY+F  G 
Sbjct: 214 AFGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGN 273

Query: 340 SASLGH 345
              +GH
Sbjct: 274 DGRIGH 279



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           QA  G   +  ++  G VY+F   +  +LGH T   +  P  +  +L  I ++Q AAG  
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIR-SLRGIRIIQAAAGPG 201

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWH 270
             + ++       VY+ G    G+  +G++  +    P+L+E  +  N+  V    G + 
Sbjct: 202 RTMLIS---DAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESLK--NIFVVQAVIGNFF 256

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATG 319
            AV+ ++GRV T+ WG  G +GH  E  +  P  ++ AL ++  + +A G
Sbjct: 257 TAVLSREGRVYTFSWGNDGRIGHQTEPNDVEPHPLLGALENIPVVQIAAG 306


>gi|388507174|gb|AFK41653.1| unknown [Lotus japonicus]
          Length = 136

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/115 (88%), Positives = 113/115 (98%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           M+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ+LNLQP+VVAAGAWHAAVVG+DGRVCTW
Sbjct: 1   MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTW 60

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           GWGRYGCLGHGNE+CESVPKVV+AL +VKA++VATGDYTTFVVS+DGDVYSFGCG
Sbjct: 61  GWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCG 115



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGK 121
           VYS G    G+LGHGT  +E  PR I   Q + +  +  AAGA    ++   G+V  +G 
Sbjct: 3   VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGW 62

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
             +G   +G +  + V  P++VE+L N+  V  A G++ T V+S +G VY+F  GN
Sbjct: 63  GRYGCLGHGNEDCESV--PKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCGN 116



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+  V   G V ++G    G LGHG  + E  P+ + +L  ++ +  A G   T +
Sbjct: 43  AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFV 102

Query: 110 ISDAGQVYAFG 120
           +SD G VY+FG
Sbjct: 103 VSDDGDVYSFG 113



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 17/133 (12%)

Query: 284 GWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           G G  G LGHG    E  P++++     +++ + VA G +   VV +DG V ++G G   
Sbjct: 7   GCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYG 66

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LGH       GN     + P++V +L  V    V          +  TF +++ G +Y+
Sbjct: 67  CLGH-------GNEDCESV-PKVVEALTNVKAVYVATG-------DYTTFVVSDDGDVYS 111

Query: 402 FGAGDKGQLGIEL 414
           FG G+    GI L
Sbjct: 112 FGCGNLLVSGIML 124



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 140 PQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 196
           P+L+E  +  N+  +  A G +  AV+ ++GRV T+ WG    LGH  E  D E  P ++
Sbjct: 25  PRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNE--DCESVPKVV 82

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
             L N+  V +A G      ++       VYS GCG
Sbjct: 83  EALTNVKAVYVATGDYTTFVVSDDGD---VYSFGCG 115


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/423 (33%), Positives = 213/423 (50%), Gaps = 35/423 (8%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGE---------ACCRRENSQAIAG 51
           +C    ++  M    +++L  +CGG+WK VLRFL A E         AC    N Q   G
Sbjct: 64  LCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSAC----NMQVTTG 119

Query: 52  PGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
             H++ +    V YS GS+  G LGHG  TT+     R IR      ++Q +A       
Sbjct: 120 RYHTLLIRDSSV-YSCGSSLCGVLGHGAETTQCVAFTR-IRFPSLANVVQVSASHNHAAF 177

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +  +G+V+  G +S     +     + +  P+LVE+LK +   Q ++G  FT  L+R+G+
Sbjct: 178 VLQSGEVFTCGDNSSFCCGHK-DTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQ 236

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYS 228
           +YT       +LGH    +   P  ++  LE I PVVQIAAG  Y+LA+        VYS
Sbjct: 237 LYTCGSNTHGQLGHGDTLDRPTP-KIIELLEGIGPVVQIAAGPSYVLAVT---DNGVVYS 292

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G    LGHG + DE  PR I+ F+  ++  V V+AG  HA  +   G V +WG G  
Sbjct: 293 FGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC 352

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+E  +++P +V  L    A+        TFV+ +DG VY FGC     +G  ++
Sbjct: 353 GALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGC-----MGFGSL 407

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                +    V+TP+++ SL+    RV QIS    +Y   HT  +T  G+++ FG  ++ 
Sbjct: 408 GFPDRDITEKVMTPRVLDSLRA--HRVSQIS--TGLY---HTVVVTNQGQMFGFGDNERV 460

Query: 409 QLG 411
           QLG
Sbjct: 461 QLG 463



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 4/155 (2%)

Query: 42  RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           RR++   +   AG  H++A+ S G VYS+G    G LGHG   ++  P  +  L+    +
Sbjct: 319 RRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAV 378

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
           QA A   +T ++ D G VY FG   FG   +  +  T+ V +P++++SL+   V Q + G
Sbjct: 379 QACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTG 438

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
            + T V++ +G+++ F      +LGH T    ++P
Sbjct: 439 LYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQP 473


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 209/421 (49%), Gaps = 27/421 (6%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR-----RENSQAIAGPGHS 55
           +C   + +  M E  ++ L  +C G WK V RFL   E           N Q   G  H+
Sbjct: 64  LCISHSTYSGMGEDSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGNMQIATGRYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           + + S G VYS GS+  G LGHG+ T +      I     I + Q +A       ++ +G
Sbjct: 124 LLI-SNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVTQSG 182

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QV+  G +S     +     ++   P+LVE+L  I   Q ++G+ F+  L+R+G VYT  
Sbjct: 183 QVFTCGDNSSFCCGHRDTSCRIF-RPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCG 241

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
                +LGH        P  +   +E   V+QIAAG  Y+LA+    +   VYS G G  
Sbjct: 242 TNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVV---NDGRVYSFGSGSN 298

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
             LGHG + +E  PR+++ F+L N+  V V+AG  HA  +  +G V TWG G  G LGHG
Sbjct: 299 FCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHG 358

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQ 352
           +E  +++P+ + +L +  A+ V      TFV+ + G VY FG     SLG     ++D  
Sbjct: 359 DEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSD-- 416

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                 VL P+ + SL+    RV QIS    +Y   HT  +TE GK++ FG  ++ QLG 
Sbjct: 417 -----KVLRPRSLDSLRV--HRVSQIS--TGLY---HTVVVTEKGKIFGFGDNERAQLGH 464

Query: 413 E 413
           E
Sbjct: 465 E 465



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 6/152 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S G+VY++G    G LGHG   ++  P+P+ SL+    +Q  A   +T +
Sbjct: 330 AGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFV 389

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           + D G VY FG   FG   +  +G +  V  P+ ++SL+   V Q + G + T V++ +G
Sbjct: 390 LVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKG 449

Query: 169 RVYTFSWGNDARLGHHT-----EPNDVEPHPL 195
           +++ F     A+LGH +     EP ++  H L
Sbjct: 450 KIFGFGDNERAQLGHESLRGCLEPTEIFIHDL 481


>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 149/441 (33%), Positives = 221/441 (50%), Gaps = 36/441 (8%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHS 55
           +C   +++  M    +++L  +CGG+WK VLRFLLA E           N Q   G  H+
Sbjct: 64  LCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGRYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
           + + S   VYS GS+  G LGHG    +       +   + R++Q +A       I ++G
Sbjct: 124 LLI-SNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILESG 182

Query: 115 QVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           +V+  G +S      G Q T + +  P+ VE+LK +   Q A G  FT  L+R G VY+ 
Sbjct: 183 EVFTCGDNS--SFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSC 240

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                 +LGH    +   P  ++ + E I  V QIAAG  Y+LA+    SG+ VYS G G
Sbjct: 241 GTNTHGQLGHGDTLDRPTP-KIIESFEGIGSVAQIAAGPSYVLAVT--DSGV-VYSFGSG 296

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
               LGHG + +E HPR I+ F+  NL  V V+AG  H   +   G V TWG G  G LG
Sbjct: 297 SNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALG 356

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIAD 350
           HG+E  +++P+ + +L    A+ V      TFV+ + G V+ FG     SLG     ++D
Sbjct: 357 HGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSD 416

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                   V+ P+++ SL+    RV QIS    +Y   HT A+T  G+++ FG  ++ QL
Sbjct: 417 -------KVMRPRILDSLRA--HRVSQIS--TGLY---HTVAVTSQGQVFGFGDNERAQL 462

Query: 411 GIELVNNQTERGNPERVDIDL 431
           G     + T RG  E  +I L
Sbjct: 463 G-----HDTLRGCLEPTEIFL 478


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 206/421 (48%), Gaps = 23/421 (5%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHS 55
           +C+ R  F  M  A R +L  +CGGSWK VLRFL + E           N Q   G  H+
Sbjct: 55  LCEARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGNMQVATGRYHT 114

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
           + V    V YS GS+  G LGHG    +       S   + R++  +A       +++ G
Sbjct: 115 LLVHDSSV-YSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETG 173

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QV+  G +S     +G  G + +  P  +E+LK  F  Q A G  FT +L+REG+VYT  
Sbjct: 174 QVFTCGDNSSLCCGHGDVG-RTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCG 232

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
                +LGH    +   P  +     + PVVQ+AAG  Y  A+        V+S G    
Sbjct: 233 SNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVT---DDGTVHSFGSCTN 289

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
             LGHG + +E  PR I+ F+  N+  V V+AG  HA  +   G V TWG G  G LGHG
Sbjct: 290 FCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHG 349

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           +E  ++ P+++ +L    A+ V      TFV++++G V +FG     SLG     D + +
Sbjct: 350 DENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLG---FPDRESS 406

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
               V+ P ++ SL+     V QIS    +Y   HT A+T  G ++ FG  ++ QLG E 
Sbjct: 407 D--KVMKPCVLDSLR--GHYVSQIS--TGLY---HTVAVTNKGIVFGFGDNERAQLGQEY 457

Query: 415 V 415
           +
Sbjct: 458 I 458



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 4/172 (2%)

Query: 42  RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           +R N   +   AG  H++A+ + G VY++G    G LGHG   ++  P  I SL+G   +
Sbjct: 310 KRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAV 369

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           Q  A   +T +++D G V AFG   FG   +   + +  V  P +++SL+  +V Q + G
Sbjct: 370 QVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTG 429

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            + T  ++ +G V+ F     A+LG       ++P  ++    ++  + IAA
Sbjct: 430 LYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFHKSSMEDIAIAA 481


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 209/434 (48%), Gaps = 42/434 (9%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
           +C     F  M    +++L  +CGG+WK VLRFL + E   +       N Q   G  H+
Sbjct: 64  LCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGKYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + + S   VYS GS   G LG G+        T  +  P P       R++  +A     
Sbjct: 124 LLI-SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLP-------RVVHVSASFNHA 175

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
             +  +G+V+  G +S     +    T+ +  P+LVESLK I   Q A G  FT  L+R+
Sbjct: 176 AFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQ 234

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 226
           G VYT       +LGH     D +  P    +E +  VVQIAAG  Y+L++        V
Sbjct: 235 GHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTV 287

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           YS G G    LGHG + DE  PR I++F+   +  V V+AG  HA  +  +G V TWG G
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKG 347

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LGHG+E  ++ P+++ +L +  A+ V      TFV+   G VY FG     S+G  
Sbjct: 348 YCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFG-----SMGFG 402

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
           ++          VL P+++ +L+     V QIS    +Y   HT  +T  G+++ FG  +
Sbjct: 403 SLGFLDRRVSDKVLKPRILDTLRA--HHVSQIS--TGLY---HTVVITSRGQIFGFGDNE 455

Query: 407 KGQLGIELVNNQTE 420
           + QLG + + +  E
Sbjct: 456 RAQLGHDTLRSCLE 469



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S G VY++G    G LGHG   E+  P  + SL+    +Q  A   +T +
Sbjct: 327 AGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFV 386

Query: 110 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           + ++G VY FG   FG   +   + +  V  P+++++L+   V Q + G + T V++  G
Sbjct: 387 LVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRG 446

Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
           +++ F     A+LGH T  + +EP
Sbjct: 447 QIFGFGDNERAQLGHDTLRSCLEP 470


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 208/427 (48%), Gaps = 28/427 (6%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
           +C     +  M    +++L  +CGG+WK VLRFL + E   +       N Q   G  H+
Sbjct: 64  LCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
           + + S   VYS GS   G LG G+   +           + R++  +A       +  +G
Sbjct: 124 LLI-SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSG 182

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V+  G +S     +    T+ +  P+LVESLK I   Q A G  FT  L+R+G VYT  
Sbjct: 183 EVFTCGDNSSSCCGHR-DTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCG 241

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                +LGH     D +  P    +E +  VVQIAAG  Y+L++        VYS G G 
Sbjct: 242 TNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTVYSFGSGA 294

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
              LGHG + DE  PR I++F+   +  V V+AG  HA  +  +G V TWG G  G LGH
Sbjct: 295 NFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGH 354

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+E  ++ P+++ +L +   + V      TFV+ + G VY FG     S+G  ++     
Sbjct: 355 GDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFG-----SMGFGSLGFLDR 409

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                VL P+++ +L+     V QIS    +Y   HT  +T  G+++ FG  ++ QLG +
Sbjct: 410 RVSGKVLKPRILDTLR--THHVSQIS--TGLY---HTVVITSRGQIFGFGDNERAQLGHD 462

Query: 414 LVNNQTE 420
           ++ +  E
Sbjct: 463 ILRSCLE 469



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S G VY++G    G LGHG   E+  P  + SL+   ++Q  A   +T +
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFV 386

Query: 110 ISDAGQVYAFGKDSFGEAEY---GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           + D+G VY FG   FG   +    V G   V  P+++++L+   V Q + G + T V++ 
Sbjct: 387 LVDSGSVYGFGSMGFGSLGFLDRRVSGK--VLKPRILDTLRTHHVSQISTGLYHTVVITS 444

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP 192
            G+++ F     A+LGH    + +EP
Sbjct: 445 RGQIFGFGDNERAQLGHDILRSCLEP 470


>gi|361069249|gb|AEW08936.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|376339101|gb|AFB34079.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339103|gb|AFB34080.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339105|gb|AFB34081.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339107|gb|AFB34082.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339109|gb|AFB34083.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339111|gb|AFB34084.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339113|gb|AFB34085.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339115|gb|AFB34086.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
          Length = 96

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 80/96 (83%), Positives = 92/96 (95%)

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
           TDEK+PR+IEQF+LL L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1   TDEKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           KVV++L  VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61  KVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+  V   G V ++G    G LGHG  E E  P+ + SL  ++ +    G   T +
Sbjct: 24  AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPKVVESLLAVKAVHVTTGDYTTFV 83

Query: 110 ISDAGQVYAFG 120
           +++ G VY+FG
Sbjct: 84  VAENGDVYSFG 94



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 82  EEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
           +E  PR I   + +++  +  AAGA    ++   G+V  +G   +G   +G +  +  T 
Sbjct: 2   DEKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE--TV 59

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           P++VESL  +  V    G++ T V++  G VY+F  G
Sbjct: 60  PKVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 299 ESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           E  P++++    +K   + +A G +   VV +DG V ++G G    LGH       GN  
Sbjct: 3   EKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGH-------GNEE 55

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
              + P++V SL  V      + +T   Y    TF + E+G +Y+FG G
Sbjct: 56  CETV-PKVVESLLAVK----AVHVTTGDY---TTFVVAENGDVYSFGCG 96



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 140 PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           P+++E  K + +  V  A G +  AV+ ++GRV T+ WG    LGH  E  +  P  ++ 
Sbjct: 6   PRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP-KVVE 64

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +L  +  V +  G      +A       VYS GCG
Sbjct: 65  SLLAVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 207/427 (48%), Gaps = 28/427 (6%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
           +C     +  M    +++L  +CGG+WK VLRFL + E   +       N Q   G  H+
Sbjct: 64  LCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
           + + S   VYS GS   G LG G+   +           + R++  +A       +  +G
Sbjct: 124 LLI-SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSG 182

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V+  G +S     +    T+ +  P+LVESLK I   Q A G  FT  L+R+G VYT  
Sbjct: 183 EVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCG 241

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                +LGH     D +  P    +E +  VVQIAAG  Y+L++        VYS G G 
Sbjct: 242 TNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTVYSFGSGA 294

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
              LGHG + DE  PR I++F+   +  V V+AG  HA  +  +G V TWG G  G LGH
Sbjct: 295 NFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGH 354

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+E  ++ P+++ +L +   + V      TFV+ + G VY FG     S+G  ++     
Sbjct: 355 GDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFG-----SMGFGSLGFLDR 409

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                VL P+++ +L+     V QIS    +Y   HT  +T  G+++ FG  ++ QLG +
Sbjct: 410 RVSDKVLKPRILDTLR--THHVSQIS--TGLY---HTVVITSRGQIFGFGDNERAQLGHD 462

Query: 414 LVNNQTE 420
            + +  E
Sbjct: 463 TLRSCLE 469



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S G VY++G    G LGHG   E+  P  + SL+   ++Q  A   +T +
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFV 386

Query: 110 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           + D+G VY FG   FG   +   + +  V  P+++++L+   V Q + G + T V++  G
Sbjct: 387 LVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRG 446

Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
           +++ F     A+LGH T  + +EP
Sbjct: 447 QIFGFGDNERAQLGHDTLRSCLEP 470



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
           SQ   G  H++ +TS+G ++ FG N   QLGH T      P  I
Sbjct: 430 SQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEI 473


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 201/367 (54%), Gaps = 27/367 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VYS+G    GQLG G T ++ RP PI +L   RI+Q A G+G T++++D G+VY +G+  
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +G  G K V  P+LVE L+   + Q   G++ TA ++  G +YT+  G   +LGH
Sbjct: 63  DGRLGHGDNGWKFV--PRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E     P  L+ TL+ + V Q+A G  + + L        VY+ G    G  GHG   
Sbjct: 121 GNETGHSTPF-LVETLKGMQVRQVACGSRHTVVLLENKD---VYTWGDKENGVSGHGDTE 176

Query: 244 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             ++ P  +E+ +  N+  V ++A  +H A + + G V T+G G++G LGH +E  + V 
Sbjct: 177 GHQYLPCPVEELRGKNI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           + V+AL   +   VA G + T  V+E G+VY++G GE   LGH       G++  N   P
Sbjct: 235 RFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH-------GDK-VNKTVP 286

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
             V SL  V + VVQI+      W +HT ALT++G++Y +G GD G+LG    N+ T+  
Sbjct: 287 TRVESL--VEKLVVQITCG----W-SHTVALTDTGEVYTWGNGDHGKLGH---NDTTKVT 336

Query: 423 NPERVDI 429
            P+ VD+
Sbjct: 337 LPKLVDV 343



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 181/359 (50%), Gaps = 24/359 (6%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           +A   R   Q   G GH++ +T +G VY++G    G+LGHG    ++ PR +  L+G  I
Sbjct: 29  DALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNI 88

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            Q   G+  T  ++ +G +Y +G   +G+  +G +     ++P LVE+LK + V Q A G
Sbjct: 89  RQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH--STPFLVETLKGMQVRQVACG 146

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           +  T VL     VYT+    +   GH  TE +   P P+   L    +VQI+A  C    
Sbjct: 147 SRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV-EELRGKNIVQISA--CGFHT 203

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            A    G  V++ G G  G+LGH S  ++   R +E      ++ V  A G +H A V +
Sbjct: 204 AALSEFG-EVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQV--ACGGFHTAAVTE 260

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G V TWG G +G LGHG++  ++VP  V++L +   + +  G   T  +++ G+VY++G
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G+   LGHN            V  P+LV  L+   +RV+ ++      +N HT AL +
Sbjct: 321 NGDHGKLGHNDT--------TKVTLPKLVDVLE--GKRVISVA-----SYNEHTVALVD 364



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 91/188 (48%), Gaps = 17/188 (9%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           M VYS G G  G+LG G  +D+  P  I+   L   + V +A G+ H  V+  +G V TW
Sbjct: 1   MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTDEGEVYTW 58

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G  G LGHG+   + VP++V+ L       V  G Y T  V+  GD+Y++G G    L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH     G    H+   TP LV +LK +  R V          + HT  L E+  +Y +G
Sbjct: 119 GH-----GNETGHS---TPFLVETLKGMQVRQVACG-------SRHTVVLLENKDVYTWG 163

Query: 404 AGDKGQLG 411
             + G  G
Sbjct: 164 DKENGVSG 171


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 205/413 (49%), Gaps = 35/413 (8%)

Query: 16  RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
           R +L ++CGGSWK VLRFL +     G       N Q   G  H++ V    V YS GS+
Sbjct: 71  RGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHDSSV-YSCGSS 129

Query: 71  SSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS---F 124
             G LGHG  TT+     R P  SL   R++  +A       +++ G+V+  G +S    
Sbjct: 130 LCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAFVTELGEVFTCGDNSSLCC 187

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G  E G    + +  P  +++LK I   Q A G  FT +L+ +G+VYT       +LGH 
Sbjct: 188 GHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG 243

Query: 185 TEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
              +   P  ++   E + PVVQ+AAG  Y  A+        VYS G      LGHG + 
Sbjct: 244 DTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVT---DDGTVYSFGSCTNFCLGHGDQH 299

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           DE  PR I+ F+  N+  V V+AG  HA  +   G V TWG G  G LGHG+E  ++ P+
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPE 359

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++ +L    A+ V      TFV++++G V++FG     SLG              V+ P+
Sbjct: 360 LISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSD-----KVMRPR 414

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ++ SL+  +  V QIS    +Y   HT A+T  G ++ FG  ++ QLG E + 
Sbjct: 415 VLDSLR--DHYVSQIS--TGLY---HTVAVTNRGIVFGFGDNERAQLGQEYIR 460


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 205/413 (49%), Gaps = 35/413 (8%)

Query: 16  RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
           R +L ++CGGSWK VLRFL +     G       N Q   G  H++ V    V YS GS+
Sbjct: 71  RGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHDSSV-YSCGSS 129

Query: 71  SSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS---F 124
             G LGHG  TT+     R P  SL   R++  +A       +++ G+V+  G +S    
Sbjct: 130 LCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAFVTELGEVFTCGDNSSLCC 187

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G  E G    + +  P  +++LK I   Q A G  FT +L+ +G+VYT       +LGH 
Sbjct: 188 GHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG 243

Query: 185 TEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
              +   P  ++   E + PVVQ+AAG  Y  A+        VYS G      LGHG + 
Sbjct: 244 DTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVT---DDGTVYSFGSCTNFCLGHGDQH 299

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           DE  PR I+ F+  N+  V V+AG  HA  +   G V TWG G  G LGHG+E  ++ P+
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPE 359

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++ +L    A+ V      TFV++++G V++FG     SLG              V+ P+
Sbjct: 360 LISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSD-----KVMRPR 414

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ++ SL+  +  V QIS    +Y   HT A+T  G ++ FG  ++ QLG E + 
Sbjct: 415 VLDSLR--DHYVSQIS--TGLY---HTVAVTNRGIVFGFGDNERAQLGQEYIR 460


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/409 (33%), Positives = 208/409 (50%), Gaps = 29/409 (7%)

Query: 16  RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
           R +L ++CGGSWK VLRFL +     G       N Q   G  H++ V    V YS GS+
Sbjct: 71  RGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHDSSV-YSCGSS 129

Query: 71  SSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
             G LGHG  TT+     R P  SL   R++  +A       +++ G+V+  G +S    
Sbjct: 130 LCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAFVTELGEVFTCGDNSSLCC 187

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
            +G  G + +  P  +++LK I   Q A G  FT +L+ +G+VYT       +LGH    
Sbjct: 188 GHGEVG-RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTI 246

Query: 188 NDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
           +   P  ++   E + PVVQ+AAG  Y  A+        VYS G      LGHG + DE 
Sbjct: 247 DRATPK-IVELFEGLAPVVQVAAGASYTFAVT---DDGTVYSFGSCTNFCLGHGDQHDEL 302

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            PR I+ F+  N+  V V+AG  HA  +   G V TWG G  G LGHG+E  ++ P+++ 
Sbjct: 303 RPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIS 362

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
           +L    A+ V      TFV++++G V++FG     SLG      G  ++   V+ P+++ 
Sbjct: 363 SLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFP--DRGSSDK---VMRPRVLD 417

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           SL+  +  V QIS    +Y   HT A+T  G ++ FG  ++ QLG E +
Sbjct: 418 SLR--DHYVSQIS--TGLY---HTVAVTNRGIVFGFGDNERAQLGQEYI 459



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  H++AVT++G+V+ FG N   QLG        +P  I   + +  I  AA +G
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIAAPSG 484

Query: 106 R 106
           R
Sbjct: 485 R 485


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 146/442 (33%), Positives = 214/442 (48%), Gaps = 38/442 (8%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSI 56
           +C    ++  M    +++L   C G+WK +  FL + E      E SQ    IA   +  
Sbjct: 64  LCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHT 123

Query: 57  AVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
            + +   VYS G + SG L HG+ T +     PI      ++ Q +A    +  +  +GQ
Sbjct: 124 LLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQ 183

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V   G +S     + +  ++ +  P+LVE+LK     Q A G  FT  LSREG  YT   
Sbjct: 184 VLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGS 242

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGC 231
               +LGH     D    P+   +E +    PVVQIAAG  Y+LAL    S   VYS G 
Sbjct: 243 NTHGQLGH----GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGS---VYSFGS 295

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G    LGHG + DE  PR+I+ F+   +  + V+AG  HA  +  +GRV TWG G  G L
Sbjct: 296 GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGAL 355

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIA 349
           GHG+E  +  P+V+  LN+  A+ V      TFV+ E G +Y FG     SLG     ++
Sbjct: 356 GHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVS 415

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           D        VL P+++  LK    RV Q+S    +Y   HT  +T+ G+++ FG  ++ Q
Sbjct: 416 D-------KVLRPRVLECLKP--HRVSQVS--TGLY---HTIVVTQRGRIFGFGDNERAQ 461

Query: 410 LGIELVNNQTERGNPERVDIDL 431
           LG     + + RG  E  +I L
Sbjct: 462 LG-----HDSLRGCLEPTEIFL 478


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 214/442 (48%), Gaps = 38/442 (8%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSI 56
           +C    ++  M    +++L   C G+WK +  FL + E      E SQ    IA   +  
Sbjct: 64  LCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHT 123

Query: 57  AVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
            + +   VYS G + SG L HG+ T +     PI      ++ Q +A    +  +  +GQ
Sbjct: 124 LLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQ 183

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V   G +S     + +  ++ +  P+LVE+LK     Q A G  FT  LSREG  YT   
Sbjct: 184 VLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGS 242

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGC 231
               +LGH     D    P+   +E +    PVVQIAAG  Y+LA+    S   VYS G 
Sbjct: 243 NTHGQLGH----GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGS---VYSFGS 295

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G    LGHG + DE  PR+I+ F+   +  + V+AG  HA  +  +GRV TWG G  G L
Sbjct: 296 GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGAL 355

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIA 349
           GHG+E  +  P+V+  LN+  A+ V      TFV+ E G +Y FG     SLG     ++
Sbjct: 356 GHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVS 415

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           D        VL P+++  LK    RV Q+S    +Y   HT  +T+ G+++ FG  ++ Q
Sbjct: 416 D-------KVLRPRVLECLKP--HRVSQVS--TGLY---HTIVVTQRGRIFGFGDNERAQ 461

Query: 410 LGIELVNNQTERGNPERVDIDL 431
           LG     + + RG  E  +I L
Sbjct: 462 LG-----HDSLRGCLEPTEIFL 478


>gi|361069251|gb|AEW08937.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|376339117|gb|AFB34087.1| hypothetical protein CL2350Contig1_01, partial [Pinus mugo]
 gi|383168843|gb|AFG67538.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168845|gb|AFG67539.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168847|gb|AFG67540.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168849|gb|AFG67541.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168851|gb|AFG67542.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168853|gb|AFG67543.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168855|gb|AFG67544.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168857|gb|AFG67545.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168859|gb|AFG67546.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168861|gb|AFG67547.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168863|gb|AFG67548.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168865|gb|AFG67549.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168867|gb|AFG67550.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168869|gb|AFG67551.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168871|gb|AFG67552.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168873|gb|AFG67553.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168875|gb|AFG67554.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
          Length = 96

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/96 (82%), Positives = 90/96 (93%)

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
           TDEK+PR IEQF+ L L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1   TDEKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           KVV++L  VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61  KVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+  V   G V ++G    G LGHG  E E  P+ + SL  ++ +    G   T +
Sbjct: 24  AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPKVVESLLRVKAVHVTTGDYTTFV 83

Query: 110 ISDAGQVYAFG 120
           +++ G VY+FG
Sbjct: 84  VAENGDVYSFG 94



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 80  TEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           T+E++ PR I   + +++  +  AAGA    ++   G+V  +G   +G   +G +  +  
Sbjct: 1   TDEKY-PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE-- 57

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           T P++VESL  +  V    G++ T V++  G VY+F  G
Sbjct: 58  TVPKVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 299 ESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           E  P+ ++    +K   + +A G +   VV +DG V ++G G    LGH       GN  
Sbjct: 3   EKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGH-------GNEE 55

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
              + P++V SL     RV  + +T   Y    TF + E+G +Y+FG G
Sbjct: 56  CETV-PKVVESLL----RVKAVHVTTGDY---TTFVVAENGDVYSFGCG 96



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 140 PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           P+ +E  K++ +  V  A G +  AV+ ++GRV T+ WG    LGH  E  +  P  ++ 
Sbjct: 6   PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP-KVVE 64

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +L  +  V +  G      +A       VYS GCG
Sbjct: 65  SLLRVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 145/439 (33%), Positives = 214/439 (48%), Gaps = 32/439 (7%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSI 56
           +C    ++  M    +++L   C G+WK +L FL + E      E SQ    IA   +  
Sbjct: 64  LCSMHPVYVGMGLTTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQGKMQIATGKYHT 123

Query: 57  AVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
            + +   VYS G + SG L HG  T +     PI      ++ Q +A    +  +  +G+
Sbjct: 124 LLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGE 183

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V   G +S     + +  ++ +  P+LVE LK     Q A G  FT  LSREG  YT   
Sbjct: 184 VLTCGDNSSHCCGH-LDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGS 242

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
               +LGH    +   P  ++  L+NI PVVQIAAG  Y+LA+    S   VYS G G  
Sbjct: 243 NTHGQLGHGDTMDRPAPK-VVEFLKNIGPVVQIAAGPSYVLAVTQDGS---VYSFGSGSN 298

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
             LGHG + DE  PR+I+ F+   +  + V+AG  HA  +  +GRV TWG G  G LGHG
Sbjct: 299 FCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHG 358

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQ 352
           +E  +  P+V+  L +  A+ V      TFV+ E G +Y FG     SLG     ++D  
Sbjct: 359 DENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD-- 416

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                 VL P+++  LK    RV Q+S    +Y   HT  +T+ G+++ FG  ++ QLG 
Sbjct: 417 -----KVLRPRVLECLKP--HRVSQVS--TGLY---HTIVVTQGGRIFGFGDNERAQLG- 463

Query: 413 ELVNNQTERGNPERVDIDL 431
               + + RG  E  +I L
Sbjct: 464 ----HNSLRGCLEPTEIFL 478


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/426 (33%), Positives = 211/426 (49%), Gaps = 31/426 (7%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHS 55
           +C  RA F  M  A R +L ++CGGSWK VLRFL +     G       + Q   G  H+
Sbjct: 55  LCAARAAFAAMGPAARGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGSMQVATGRYHT 114

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
           + V    V YS GS+  G LGHG    +       S   + R+I  +A       ++++G
Sbjct: 115 LLVHDSSV-YSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESG 173

Query: 115 QVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           +V+  G +S    G  E G    + +  P  VE+LK I   Q A G  FT +L+R+G+VY
Sbjct: 174 EVFTCGDNSSLCCGHGEVG----RTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVY 229

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           T       +LGH    +   P  L+   E    VVQIAAG  Y  A+        V+S G
Sbjct: 230 TCGSNTHGQLGHGDTIDRATP-KLIELFEGPTQVVQIAAGASYTFAVT---DDGTVHSFG 285

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
                 LGHG + DE  PR I+ F+  N+  V V+AG  HA  +   G V TWG G  G 
Sbjct: 286 SCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGA 345

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGHG+E  ++ P+++ +L    A+ V      TFV++++G V +FG     SLG   +  
Sbjct: 346 LGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGF--LDR 403

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           G  ++   V+ P+++ SL+  +  V QIS    +Y   HT A+T  G ++ FG  ++ QL
Sbjct: 404 GTSDK---VMRPRVLESLQ--DHYVSQIS--TGLY---HTVAVTNKGIVFGFGDNERAQL 453

Query: 411 GIELVN 416
           G E + 
Sbjct: 454 GQEYIR 459



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  H++AVT+KG+V+ FG N   QLG        +P  I   + I  I  AA +G
Sbjct: 424 SQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIEDIPIAAPSG 483


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/421 (33%), Positives = 206/421 (48%), Gaps = 31/421 (7%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHS 55
           +C    ++  M    ++ L  +C G+WK VLRFL A     G       N Q   G  H+
Sbjct: 64  LCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           + +    V YS GS+  G LGHG  TT+     R IR      +IQ +A       +  +
Sbjct: 124 LLIRDSSV-YSCGSSLCGVLGHGAETTQCVAFTR-IRFPSLAYVIQVSASHNHAAFVLQS 181

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+V+  G +S     +     + +  P+LVE+LK +   Q A+G  FT  L+R+G++YT 
Sbjct: 182 GEVFTCGDNSSFCCGHN-DTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTC 240

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                 +LGH    +   P  ++  LE +  VVQIAAG  Y+LA+        VYS G G
Sbjct: 241 GTNTHGQLGHGDTQDRPTP-KIIELLEGVGSVVQIAAGPSYVLAVT---DNGVVYSFGSG 296

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
               LGHG + DE  PR I+ F+  ++  V V+AG  HA  +   G V +WG G  G LG
Sbjct: 297 SNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALG 356

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIAD 350
           HG+E  +++P +V  L    A+ V      TFV+ + G VY FG     SLG     ++D
Sbjct: 357 HGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSD 416

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                   V+ P+++ SL+     V QIS    +Y   HT  +T  G+++ FG  ++ QL
Sbjct: 417 -------KVMRPRVLDSLRA--RHVSQIS--TGLY---HTVVVTNQGQMFGFGDNERAQL 462

Query: 411 G 411
           G
Sbjct: 463 G 463



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 4/155 (2%)

Query: 42  RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           RR++   +   AG  H++A+ S G VYS+G    G LGHG   ++  P  +  L+    +
Sbjct: 319 RRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAV 378

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
           Q  A   +T ++ D G VY FG   FG   +  +G +  V  P++++SL+   V Q + G
Sbjct: 379 QVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTG 438

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
            + T V++ +G+++ F     A+LGH T    ++P
Sbjct: 439 LYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQP 473


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 198/367 (53%), Gaps = 27/367 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VYS+G    GQLG G T ++ RP PI +L   RI+Q A G+G T+++++ G+VY +G+  
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +G  G K V  P+LVE L+   + Q   G++ TA ++  G +YT+  G   +LGH
Sbjct: 63  DGRLGHGDNGWKFV--PRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E     P+ L+ TL+++ V Q+A G  + + L        VY+ G    G  GHG   
Sbjct: 121 GNETGHSTPY-LVETLKSMQVRQVACGSRHTVVLLENKD---VYTWGDKENGVSGHGDT- 175

Query: 244 DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            E H  L    + L  + +V ++A  +H A + + G V T+G G++G LGH +E  + V 
Sbjct: 176 -EGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           + V AL   +   VA G + T  V+E G+VY++G GE   LGH       G++  N   P
Sbjct: 235 RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH-------GDK-VNKTVP 286

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
             V SL  + + V+QI+      W +HT  LT++G++Y +G GD G+LG    N+  +  
Sbjct: 287 TRVESL--LEKLVLQITCG----W-SHTVTLTDTGEVYTWGNGDHGKLGH---NDTAKVT 336

Query: 423 NPERVDI 429
            P+ VD+
Sbjct: 337 LPKPVDV 343



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 175/342 (51%), Gaps = 9/342 (2%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           +A   R   Q   G GH++ +T +G VY++G    G+LGHG    ++ PR +  L+G  I
Sbjct: 29  DALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNI 88

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            Q   G+  T  ++ +G +Y +G   +G+  +G +     ++P LVE+LK++ V Q A G
Sbjct: 89  RQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH--STPYLVETLKSMQVRQVACG 146

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           +  T VL     VYT+    +   GH  TE +   P P+   L    +VQI+A  C    
Sbjct: 147 SRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV-EELRGKSIVQISA--CGFHT 203

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            A    G  V++ G G  G+LGH S  ++   R ++      ++ V  A G +H A V +
Sbjct: 204 AALSEFG-EVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQV--ACGGFHTAAVTE 260

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G V TWG G +G LGHG++  ++VP  V++L +   + +  G   T  +++ G+VY++G
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWG 320

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
            G+   LGHN  A     +  +VL  + V S+   NE  V +
Sbjct: 321 NGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVAL 362



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 17/188 (9%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           M VYS G G  G+LG G  +D+  P  I+   L   + V +A G+ H  V+ ++G V TW
Sbjct: 1   MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTEEGEVYTW 58

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G  G LGHG+   + VP++V+ L       V  G Y T  V+  GD+Y++G G    L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH     G    H+   TP LV +LK +  R V          + HT  L E+  +Y +G
Sbjct: 119 GH-----GNETGHS---TPYLVETLKSMQVRQVACG-------SRHTVVLLENKDVYTWG 163

Query: 404 AGDKGQLG 411
             + G  G
Sbjct: 164 DKENGVSG 171



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 8/173 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T  G VY++G+   G+LGH  T +   P+P+  L G R+I  A+    
Sbjct: 299 QITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEH 358

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ + D     A  + S   + Y     +L+ S +  +     F+++    +   A+L+ 
Sbjct: 359 TVALVDP---VAMLRASMLTSSYVGDMRQLIDSAEFSDV---TFLIEGRAVHSHRAILAA 412

Query: 167 EGRVYTFSWGNDARLGHHTE-PNDVEPHPL-LGTLENIPVVQIAAGYCYLLAL 217
               +   + +  R  H  E P      P+ L  LE I V  I  G    L L
Sbjct: 413 RSDHFRAMFSSGMRESHEQEIPLSHTRVPVFLALLEYIYVDSINVGAEMALEL 465


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 185/327 (56%), Gaps = 31/327 (9%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           QAIA G  HS+A+T  G VYSFG    G+LGHG T+ +  P+ I  L  I+ I  AAG  
Sbjct: 81  QAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDF 138

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ ++ +G VY+FG    G +  G   T+  ++P+ +ESL ++  + AA GN   A L+
Sbjct: 139 HSLALTKSGDVYSFGN---GTSGLGHGNTEDQSTPKKIESLSDVQAI-AAGGNHSLA-LT 193

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGM 224
           + G VY+F +G   RLGH    + +EP      +E++  +Q IAAG  + LAL    SG 
Sbjct: 194 KSGDVYSFGFGLFGRLGHGDTDSQLEPK----KIEDLSDIQAIAAGGNHSLALTK--SG- 246

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            VYS G GL G+LGHG   ++  P+ IE   L ++Q   VAAGA H+  + + G V ++G
Sbjct: 247 DVYSFGWGLHGQLGHGDTENQLTPKKIE--DLSDIQ--AVAAGANHSLALTKSGEVYSFG 302

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G LGHG+ + +  PK ++ L D++AI  A GD+ +  +++ GDVYSFG G S  LG
Sbjct: 303 RGNTGQLGHGDTDDQLTPKKIEGLKDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-LG 359

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQV 371
           H           AN L P+ +  L  +
Sbjct: 360 H--------GDTANQLEPKKIEGLTDI 378



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 194/366 (53%), Gaps = 42/366 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+SFG    G+LGHG T  +  P+ I  L  I+ I  AAG   ++ ++ +G VY+FG   
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQAI--AAGTNHSLALTKSGDVYSFGFGL 106

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
           FG   +G   ++L   P+ +E L +I  + A  G+F +  L++ G VY+F  G  + LGH
Sbjct: 107 FGRLGHGNTDSQL--EPKKIEGLSDIQAIAA--GDFHSLALTKSGDVYSFGNGT-SGLGH 161

Query: 184 HTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
               +   P      +E++  VQ IAAG  + LAL    SG  VYS G GL G+LGHG  
Sbjct: 162 GNTEDQSTPK----KIESLSDVQAIAAGGNHSLALTK--SG-DVYSFGFGLFGRLGHGDT 214

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             +  P+ IE   L ++Q   +AAG  H+  + + G V ++GWG +G LGHG+ E +  P
Sbjct: 215 DSQLEPKKIE--DLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTP 270

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           K ++ L+D++A  VA G   +  +++ G+VYSFG G +  LGH    D         LTP
Sbjct: 271 KKIEDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDD--------QLTP 320

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
           + +  LK +               + H+ ALT+SG +Y+FG G  G LG     NQ E  
Sbjct: 321 KKIEGLKDIQAIAA---------GDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLE-- 368

Query: 423 NPERVD 428
            P++++
Sbjct: 369 -PKKIE 373



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 117/209 (55%), Gaps = 28/209 (13%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           ++V+S G G+ GKLGHG   ++  P+ IE   L ++Q   +AAG  H+  + + G V ++
Sbjct: 47  VSVFSFGMGMYGKLGHGDTANQLAPKKIE--GLSDIQ--AIAAGTNHSLALTKSGDVYSF 102

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G+G +G LGHGN + +  PK ++ L+D++AI  A GD+ +  +++ GDVYSFG G S  L
Sbjct: 103 GFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-L 159

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH    D          TP+ + SL  V                 H+ ALT+SG +Y+FG
Sbjct: 160 GHGNTEDQS--------TPKKIESLSDVQAIAA---------GGNHSLALTKSGDVYSFG 202

Query: 404 AGDKGQLGIELVNNQTERGNPERVDIDLS 432
            G  G+LG    ++Q E   P++++ DLS
Sbjct: 203 FGLFGRLGHGDTDSQLE---PKKIE-DLS 227



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 11/175 (6%)

Query: 47  QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           QAIA  G HS+A+T  G VYSFG    GQLGHG TE +  P+ I  L  I+ +  AAGA 
Sbjct: 230 QAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQAV--AAGAN 287

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ ++ +G+VY+FG+ + G+  +G    +L  +P+ +E LK+I  + A  G+F +  L+
Sbjct: 288 HSLALTKSGEVYSFGRGNTGQLGHGDTDDQL--TPKKIEGLKDIQAIAA--GDFHSLALT 343

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           + G VY+F  G  + LGH    N +EP  + G  +   +  IAAG  + LALA +
Sbjct: 344 KSGDVYSFGNGT-SGLGHGDTANQLEPKKIEGLTD---IQAIAAGANHSLALAVE 394


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 196/358 (54%), Gaps = 24/358 (6%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VY++G    GQLG G T +++ P  + +LQ  + +Q + G+G T++++D G+VY +G+  
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGD 62

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +G  G K V  P+LVE L++  V Q   G++ TA ++  G +YT+  G   +LGH
Sbjct: 63  DGRLGHGDNGWKFV--PRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGH 120

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E     P  L+ +++ + V Q+A G  + + L        VY+ G    G  GHG  +
Sbjct: 121 GNENGHSTP-SLVESIKGLYVRQVACGSRHTVVLL---ENQDVYTWGDKENGVSGHGDTS 176

Query: 244 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             ++ P  + +   +N++   ++A  +H A + ++G+V T+G G++G LGH +E  + V 
Sbjct: 177 GHQYSPYCVSELVEINIKQ--ISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVA 234

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           K + AL   +   VA G + T  V+E G V+++G GE   LGH       G++  N + P
Sbjct: 235 KCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGH-------GDK-VNQIIP 286

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
             V SL  +++ ++Q++      W +HT ALT+ G+++ +G GD G+LG    N  TE
Sbjct: 287 TRVESL--IDKNIIQLTCG----W-SHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTE 337



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 182/357 (50%), Gaps = 24/357 (6%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   R+  Q   G GH++ +T  G VY++G    G+LGHG    ++ PR +  L+  ++
Sbjct: 29  EALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKV 88

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            Q   G+  T  ++ +G++Y +G   +G+  +G +     ++P LVES+K ++V Q A G
Sbjct: 89  RQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGH--STPSLVESIKGLYVRQVACG 146

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           +  T VL     VYT+    +   GH  T  +   P+  +  L  I + QI+A  C    
Sbjct: 147 SRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPY-CVSELVEINIKQISA--CGFHT 203

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            A   +G  V++ G G  G+LGH S  ++   + I+   L+  +   VA G +H A V +
Sbjct: 204 AALSENGQ-VFTFGEGKFGRLGHNSERNQPVAKCIDA--LIGKRIKQVACGGFHTAAVTE 260

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G V TWG G +G LGHG++  + +P  V++L D   I +  G   T  +++ G+V+++G
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            G+   LGHN            V  P+L+ +    ++RV+ ++      +N HT AL
Sbjct: 321 NGDHGKLGHNDT--------NKVTEPKLIETFN--SKRVISVA-----SYNEHTVAL 362



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 131/261 (50%), Gaps = 25/261 (9%)

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           VYT+  G D +LG     +   P  L+  L++   VQI+ G  + + L        VY+ 
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHP-ILVEALQDRQTVQISCGSGHTVVLT---DDGKVYTW 58

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G G  G+LGHG    +  PRL+E  +   ++ V    G++H A V   G + TWG G YG
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQV--TCGSYHTAAVTVSGELYTWGGGMYG 116

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LGHGNE   S P +V+++  +    VA G   T V+ E+ DVY++G  E+   GH    
Sbjct: 117 KLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGH---- 172

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
              G+   +  +P  V+ L ++N  + QIS         HT AL+E+G+++ FG G  G+
Sbjct: 173 ---GDTSGHQYSPYCVSELVEIN--IKQISAC-----GFHTAALSENGQVFTFGEGKFGR 222

Query: 410 LGIELVNNQTERGNPERVDID 430
           LG     + +ER  P    ID
Sbjct: 223 LG-----HNSERNQPVAKCID 238



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 17/188 (9%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           M VY+ G G  G+LG G  +D+ HP L+E  Q  + Q V ++ G+ H  V+  DG+V TW
Sbjct: 1   MTVYTWGRGEDGQLGLGDTSDQYHPILVEALQ--DRQTVQISCGSGHTVVLTDDGKVYTW 58

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G  G LGHG+   + VP++V+ L D K   V  G Y T  V+  G++Y++G G    L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKL 118

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH     G  N H+   TP LV S+K +  R V          + HT  L E+  +Y +G
Sbjct: 119 GH-----GNENGHS---TPSLVESIKGLYVRQVACG-------SRHTVVLLENQDVYTWG 163

Query: 404 AGDKGQLG 411
             + G  G
Sbjct: 164 DKENGVSG 171


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 211/439 (48%), Gaps = 36/439 (8%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
           +C    I+  ++   ++DL  +CG +WK VLRFL + E           N Q   G  H+
Sbjct: 64  LCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           + +    V YS GS+  G LGHG  TT+     R I       + Q +A       +  +
Sbjct: 124 LLIKDSSV-YSCGSSLCGVLGHGPETTQCVAFSR-INFPPLAHVAQVSASHNHAAFVMQS 181

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+V+  G +S     +G    + +  P+LVE+LK +   Q A G  FT  L+ +G VYT 
Sbjct: 182 GEVFTCGDNSSFCCGHG-DTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                 +LGH    +   P  ++  LE + PVVQIAAG  Y  A+A    G  V+S G G
Sbjct: 241 GTNTHGQLGHGDTVDRRTP-KIVELLEGVGPVVQIAAGPSY--AMAVTDDG-TVHSFGSG 296

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
               LGHG + +E  PR I+ F+   +  V ++AG  H   +   G V TWG G  G LG
Sbjct: 297 SNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALG 356

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           HG+E  ++ P+++ +L    A+ V      TFV+ + G VY FG     SLG        
Sbjct: 357 HGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP------ 410

Query: 353 GNRHAN--VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            +R A+  V+ P ++ SL+     + QIS    +Y   HT A+   G+++ FG  ++ QL
Sbjct: 411 -DRGASDKVMRPWILDSLR--GHYISQIS--TGLY---HTVAVNNKGQIFGFGDNERAQL 462

Query: 411 GIELVNNQTERGNPERVDI 429
           G     + T RG P   +I
Sbjct: 463 G-----HDTLRGCPVPTEI 476


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 211/439 (48%), Gaps = 36/439 (8%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
           +C    I+  ++   ++DL  +CG +WK VLRFL + E           N Q   G  H+
Sbjct: 64  LCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHT 123

Query: 56  IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           + +    V YS GS+  G LGHG  TT+     R I       + Q +A       +  +
Sbjct: 124 LLIKDSSV-YSCGSSLCGVLGHGPETTQCVAFSR-INFPPLAHVAQVSASHNHAAFVMQS 181

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+V+  G +S     +G    + +  P+LVE+LK +   Q A G  FT  L+ +G VYT 
Sbjct: 182 GEVFTCGDNSSFCCGHG-DTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                 +LGH    +   P  ++  LE + PVVQIAAG  Y  A+A    G  V+S G G
Sbjct: 241 GTNTHGQLGHGDTVDRRTP-KIVELLEGVGPVVQIAAGPSY--AMAVTDDG-TVHSFGSG 296

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
               LGHG + +E  PR I+ F+   +  V ++AG  H   +   G V TWG G  G LG
Sbjct: 297 SNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALG 356

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           HG+E  ++ P+++ +L    A+ V      TFV+ + G VY FG     SLG        
Sbjct: 357 HGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP------ 410

Query: 353 GNRHAN--VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            +R A+  V+ P ++ SL+     + QIS    +Y   HT A+   G+++ FG  ++ QL
Sbjct: 411 -DRGASDKVMRPWILDSLR--GHYISQIS--TGLY---HTVAVXNKGQIFGFGDNERAQL 462

Query: 411 GIELVNNQTERGNPERVDI 429
           G     + T RG P   +I
Sbjct: 463 G-----HDTLRGCPVPTEI 476


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 174/319 (54%), Gaps = 21/319 (6%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSS-----GQLGHGTTEEEWRPRPIRSL 92
           EA  R       AG  HS+  T  G + SFG  S+     G+LGHG    +  PRP+ SL
Sbjct: 104 EALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL 163

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
            G+RI++ AAGA  ++++SD G V++FG    G   +G Q  +LV  P+L+ SL+   VV
Sbjct: 164 SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV--PKLISSLQREKVV 221

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
             A G+  + V++  G VY+F  G++  LGH      + P  +   ++  P V++AAG  
Sbjct: 222 DIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR-PAVKVAAGGS 280

Query: 213 YLLALA----CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ--PVVVAA 266
           + L L+     +  G  V S G    G+LG G  +     R+I     + ++   V + A
Sbjct: 281 HSLVLSKLYVLEQEGR-VLSFGQNSYGQLGLGHFS-----RMIASPAQVQVEAAAVEIEA 334

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFV 325
           GA H+ V+  DGRV ++G  ++G LGHGN+  ++  P ++Q+L   + + VA G+  + V
Sbjct: 335 GAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLV 394

Query: 326 VSEDGDVYSFGCGESASLG 344
           +S +G V+SFGCG++  LG
Sbjct: 395 LSAEGTVFSFGCGKNGRLG 413



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 184/371 (49%), Gaps = 38/371 (10%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G V SFG       GHG   ++ RP+ + +L   R+   +AG   +++ +  G + +FG 
Sbjct: 78  GNVVSFGLADPS--GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGY 135

Query: 122 DSF-----GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
            S      G   +G Q T+++  P L  SL  + +V+ A G   + VLS +G V++F  G
Sbjct: 136 GSANVVVDGRLGHGDQRTQMIPRPVL--SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVG 193

Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            D  LGH  +   + P  L+ +L+   VV IAAG  + L +A   SG  VYS G G  G 
Sbjct: 194 IDGSLGHGDQARQLVP-KLISSLQREKVVDIAAGSAHSLVVA--ESG-DVYSFGLGSEGA 249

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG------QDGRVCTWGWGRYGC 290
           LGHG       P+ IE F  +    V VAAG  H+ V+       Q+GRV ++G   YG 
Sbjct: 250 LGHGDTDMSLVPKKIEHF--VQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQ 307

Query: 291 LGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LG G+     + P  VQ   +  A+ +  G + + V++ DG VYSFG  +   LGH    
Sbjct: 308 LGLGHFSRMIASPAQVQV--EAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGH---- 361

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
              GN   +   P L+ SL++  ER+V ++  N+      +  L+  G +++FG G  G+
Sbjct: 362 ---GNDLRDNPEPTLIQSLER--ERIVDVAAGNNF-----SLVLSAEGTVFSFGCGKNGR 411

Query: 410 LGIELVNNQTE 420
           LG    +N T+
Sbjct: 412 LGKGDESNATQ 422



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 136/272 (50%), Gaps = 30/272 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ ++ +G V+SFG    G LGHG    +  P+ I SLQ  +++  AAG+  +++
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLV 232

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR--- 166
           ++++G VY+FG  S G   +G     LV  P+ +E       V+ A G   + VLS+   
Sbjct: 233 VAESGDVYSFGLGSEGALGHGDTDMSLV--PKKIEHFVQRPAVKVAAGGSHSLVLSKLYV 290

Query: 167 ---EGRVYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAGYCYLLA 216
              EGRV +F   S+G    LGH +         ++ +   + V    V+I AG  + L 
Sbjct: 291 LEQEGRVLSFGQNSYGQLG-LGHFSR--------MIASPAQVQVEAAAVEIEAGAHHSLV 341

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           L        VYS G    G+LGHG+   D   P LI+  +   +  V VAAG   + V+ 
Sbjct: 342 LTNDGR---VYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERI--VDVAAGNNFSLVLS 396

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
            +G V ++G G+ G LG G+E   + P VV A
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVVFA 428


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 183/353 (51%), Gaps = 30/353 (8%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           ++YS+G    GQ G+G+T ++  P P+  L+ + ++Q A G+G T+++++   V+++G+ 
Sbjct: 7   MLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
             G   +     K V  P LV +L    + Q   G++ TA +S  G ++T+  G   +LG
Sbjct: 67  DDGRLGHADNHWKYV--PHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 183 HHTEPNDVEPHPLLGTLENI---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           H  E      HP    +E      V QIA G  +  AL    +G  VY  G    G  G 
Sbjct: 125 HGNEVG----HPAPCRVEAFIGREVEQIACGSRHTAALL---AGGEVYCWGDRENGVCGI 177

Query: 240 GSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           G   + ++ P+ +E  + + +    +AA  +H A + QDG + +WG G++G LG GNE+ 
Sbjct: 178 GEAAEHQYLPKKLEALKGVKITQ--IAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKN 235

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           +  P  V+ L  V+   VA G + +  V+EDGDV +FG GE   LGH       G++  N
Sbjct: 236 QVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGH-------GDK-TN 287

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P LV +L+     +VQ++   S     HT  L+E GK++ FG GD G+LG
Sbjct: 288 RTVPCLVKALEGAG--IVQVTCGWS-----HTVTLSEDGKVFTFGNGDHGKLG 333



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G GH++ +T    V+S+G    G+LGH     ++ P  + +L G  I Q   G+  
Sbjct: 43  QIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYH 102

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  ISD G ++ +G   +G+  +G +      +P  VE+     V Q A G+  TA L  
Sbjct: 103 TAAISDTGALWTWGGGMYGKLGHGNEVGH--PAPCRVEAFIGREVEQIACGSRHTAALLA 160

Query: 167 EGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            G VY +    +   G      H   P  +E       L+ + + QIAA  C     A  
Sbjct: 161 GGEVYCWGDRENGVCGIGEAAEHQYLPKKLE------ALKGVKITQIAA--CGFHTAAIT 212

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             G A++S G G  G+LG G+  ++  P  +E  Q + ++ V  A G +H+A V +DG V
Sbjct: 213 QDG-ALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQV--ACGGFHSACVTEDGDV 269

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            T+G G +G LGHG++   +VP +V+AL     + V  G   T  +SEDG V++FG G+ 
Sbjct: 270 LTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH A        +A    P+LV SL   N +V +++      +N HT AL  + +  
Sbjct: 330 GKLGHGA--------NAKSALPKLVESL--ANMKVAKVA-----SYNEHTVALCHAEQEQ 374

Query: 401 AFGAGDKGQLGIELVNN 417
           A  + D  +    L+NN
Sbjct: 375 AVMSFDFLKDLRRLINN 391



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 24/305 (7%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +Y++G+   G+   G    + +  P  VE LK++ VVQ A G+  T VL+ +  V+++  
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGR 65

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
           G+D RLGH        PH L+  L    + Q+  G  +  A++      A+++ G G+ G
Sbjct: 66  GDDGRLGHADNHWKYVPH-LVSALTGKSIKQVTCGSYHTAAIS---DTGALWTWGGGMYG 121

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           KLGHG+      P  +E F  +  +   +A G+ H A +   G V  WG    G  G G 
Sbjct: 122 KLGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGE 179

Query: 296 E-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
             E + +PK ++AL  VK   +A   + T  +++DG ++S+G G+   LG       QGN
Sbjct: 180 AAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLG-------QGN 232

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
              N +TP  V  L+ V  RV Q++         H+  +TE G +  FG G+ GQLG   
Sbjct: 233 E-KNQVTPCCVEGLQGV--RVKQVACGGF-----HSACVTEDGDVLTFGGGEHGQLGHGD 284

Query: 415 VNNQT 419
             N+T
Sbjct: 285 KTNRT 289



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 15/136 (11%)

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            D  + +WG G  G  G+G+   + +P  V+ L  +  + +A G   T V++ED DV+S+
Sbjct: 4   HDSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSW 63

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G G+   LGH   AD           P LV++L    + + Q++  +      HT A+++
Sbjct: 64  GRGDDGRLGH---ADNHWK-----YVPHLVSAL--TGKSIKQVTCGSY-----HTAAISD 108

Query: 396 SGKLYAFGAGDKGQLG 411
           +G L+ +G G  G+LG
Sbjct: 109 TGALWTWGGGMYGKLG 124


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 177/349 (50%), Gaps = 24/349 (6%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+++G    GQLG G T ++  P  + +L+G+ + Q A G+G T++++  G+V+ +G+  
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +G  G K V  P++ +SL    V+Q   G++ TA ++  G +YT+  G   +LGH
Sbjct: 62  DGRLGHGDNGWKYV--PRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGH 119

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E     P  +   L    V QIA G  +    A   +  A+Y+ G    G  GHG   
Sbjct: 120 GDEAGHATPKRVE-ALVGATVAQIACGSRHT---AIVTASGALYTWGDKENGVAGHGETE 175

Query: 244 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             ++ PRL+E      +  +  +A  +H A+V   G + TWG G++G LGH +E     P
Sbjct: 176 GHQYLPRLLESMAAKRVAQI--SACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP 233

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            +V  +   K   V+ G + T VVSEDG +Y+FG GE   LGH        N   N +TP
Sbjct: 234 TIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGH--------NDRVNKMTP 285

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             V +L  +   V QI+   S     H+ ALT  G +Y +G GD G+LG
Sbjct: 286 TFVEALDGM--FVSQITCGWS-----HSVALTVKGLVYTWGNGDHGKLG 327



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 17/320 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G GH++ +T+ G V+++G    G+LGHG    ++ PR  +SL G  ++Q   G+  
Sbjct: 37  QIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYH 96

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  ++  G +Y +G   +G+  +G +      +P+ VE+L    V Q A G+  TA+++ 
Sbjct: 97  TAAVTGNGDLYTWGGGMYGKLGHGDEAGH--ATPKRVEALVGATVAQIACGSRHTAIVTA 154

Query: 167 EGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            G +YT+    +   GH  TE +   P  LL ++    V QI+A  C         +G  
Sbjct: 155 SGALYTWGDKENGVAGHGETEGHQYLPR-LLESMAAKRVAQISA--CGFHTAIVTDAG-E 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +++ G G  G+LGH S  +   P +++   ++  +P  V+ G +H AVV +DGR+ T+G 
Sbjct: 211 LFTWGEGKFGRLGHMSERNCHSPTIVDY--MVGKKPRQVSCGGFHTAVVSEDGRLYTFGG 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G +G LGH +   +  P  V+AL+ +    +  G   +  ++  G VY++G G+   LGH
Sbjct: 269 GEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGH 328

Query: 346 NAIADGQGNRHANVLTPQLV 365
                G G +   V  PQ V
Sbjct: 329 -----GNGRK---VAVPQAV 340



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 16/283 (5%)

Query: 27  WKLVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
           WK V R    LAG+        Q   G  H+ AVT  G +Y++G    G+LGHG      
Sbjct: 72  WKYVPRMTQSLAGQIVL-----QVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHA 126

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 143
            P+ + +L G  + Q A G+  T +++ +G +Y +G    G A +G  +G + +  P+L+
Sbjct: 127 TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYL--PRLL 184

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
           ES+    V Q +   F TA+++  G ++T+  G   RLGH +E N   P  ++  +    
Sbjct: 185 ESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP-TIVDYMVGKK 243

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             Q++   C     A       +Y+ G G  G+LGH  R ++  P  +E    + +  + 
Sbjct: 244 PRQVS---CGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQIT 300

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
              G  H+  +   G V TWG G +G LGHGN    +VP+ V+
Sbjct: 301 --CGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 17/187 (9%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           AV++ G G  G+LG G  +D+  P  ++  + + +Q   +A G+ H  V+  DG V TWG
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQ--IACGSGHTVVLTTDGEVFTWG 58

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G LGHG+   + VP++ Q+L     + V  G Y T  V+ +GD+Y++G G    LG
Sbjct: 59  RGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H   A      HA   TP+ V +L  V   V QI+  +      HT  +T SG LY +G 
Sbjct: 119 HGDEAG-----HA---TPKRVEAL--VGATVAQIACGSR-----HTAIVTASGALYTWGD 163

Query: 405 GDKGQLG 411
            + G  G
Sbjct: 164 KENGVAG 170


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 194/426 (45%), Gaps = 24/426 (5%)

Query: 2   CQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFL------LAGEACCRRENSQAIAGPGHS 55
           CQ   +F+      R +L  +C G+WKLVL FL                +    AG  H+
Sbjct: 60  CQMHPVFENFPPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHT 119

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAG 114
           + V  KG +Y+ G+  S    +       RP  I       RI+Q +A       ++++G
Sbjct: 120 LLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESG 179

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVY FG +       G  G + ++ P LV +L+     Q + G  +T  L+R G ++++ 
Sbjct: 180 QVYTFGDNVSCCCGVGESG-QPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWG 238

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             +  +LG         P  +    E+ PV Q++AG C+ LA+    SG  ++S G G  
Sbjct: 239 CNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVT--KSGQ-LFSWGYGSN 295

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
             LGH     E  P+ +E     +L  +  AAG  H+A +   G V TWG G  G LGHG
Sbjct: 296 YCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCGALGHG 355

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
               +  P VV AL   +A+ V      TFV+ ++G V+SFG     SLG       QG 
Sbjct: 356 AGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLGV------QGK 409

Query: 355 RHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
             ++ V++PQ +  L     +V  I+    +Y   HT  +T  G ++ FG  D  QLG  
Sbjct: 410 SASDTVVSPQSL-DLALHGHKVSTIAA--GMY---HTLVITRKGAIFGFGDNDSSQLGPV 463

Query: 414 LVNNQT 419
            V N+T
Sbjct: 464 SVTNET 469



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 156/340 (45%), Gaps = 26/340 (7%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKD-SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
           R +  AAG   T+L+   G++YA G   S       V   +   S  L  +   I  + A
Sbjct: 108 RDVLVAAGRYHTLLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISA 167

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
              +   A ++  G+VYTF        G       +    L+ TLE  P  Q++ G  Y 
Sbjct: 168 NFNH--AAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYT 225

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
           +AL        ++S GC   G+LG G+  ++  PR IE+F   N  PV  V+AG  H   
Sbjct: 226 VALT---RNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESN--PVAQVSAGICHTLA 280

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGD 331
           V + G++ +WG+G   CLGH +   E  PK V+    +D+  I  A GD  +  +   G 
Sbjct: 281 VTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGY 340

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           VY++G G   +LGH A  D +        TP +V +LK  + R VQ+     +     TF
Sbjct: 341 VYTWGKGYCGALGHGAGTDQR--------TPLVVAALK--STRAVQV-----VARRRKTF 385

Query: 392 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 431
            L ++G +++FG      LG++  +      +P+ +D+ L
Sbjct: 386 VLGDNGTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDLAL 425


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 6/282 (2%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VYS+G    GQLGHG  + + +PR + +  G  + Q + G   T ++ + G+V+ FG+ +
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
           FG+   G   T  V++P LV +L+   V Q A G   T  L   G++YT+  G   RLGH
Sbjct: 68  FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E     P  L+ +L+   V  +AAG  +   +     G  + + G G  G+LGHG  T
Sbjct: 128 GDEVRQASP-KLVESLQGKEVTFVAAGGFHSSVII---EGGNLLTWGGGYFGQLGHGDET 183

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           D K P++++  Q        VA G  H  ++ Q   V TWG G +G LG G+EE  + P 
Sbjct: 184 DRKTPKMVKGVQQCIAHE--VACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPI 241

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           ++ AL  V  IH++TG + +  ++ +G +Y++G G+   LGH
Sbjct: 242 MITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 23/322 (7%)

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           +  +VY++G+   G+  +G + T+    P+LV +     V Q + GN  TA+L   G V+
Sbjct: 4   EGSEVYSWGQGVLGQLGHGDEKTQ--RQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVF 61

Query: 172 TFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           TF  GN  +LG       +V    L+  L+   V Q+A G+ +  AL        +Y+ G
Sbjct: 62  TFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQ---LYTWG 118

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
            G  G+LGHG    +  P+L+E  Q    +   VAAG +H++V+ + G + TWG G +G 
Sbjct: 119 SGEYGRLGHGDEVRQASPKLVESLQ--GKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGHG+E     PK+V+ +    A  VA G + T ++++  +V+++G GE   LG   I D
Sbjct: 177 LGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLG---IGD 233

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            +  +HA    P ++T+L+ V   V+ IS         H+ ALT  G LY +G GDKGQL
Sbjct: 234 EE--KHAE---PIMITALQGVG--VIHISTGG-----FHSAALTSEGVLYTWGGGDKGQL 281

Query: 411 GIELVNNQTERGNPERVDIDLS 432
           G    N+Q      E +  D+S
Sbjct: 282 GHGDENSQNIPVVVEVISCDMS 303



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)

Query: 164 LSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +SREG  VY++  G   +LGH  E    +P  ++  L    V Q++ G  +   L     
Sbjct: 1   MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGE 59

Query: 223 GMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
              V++ G G  G+LG G+    +   P L+   Q  +++ V  A G  H   +  +G++
Sbjct: 60  ---VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQV--ACGWHHTCALIDNGQL 114

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            TWG G YG LGHG+E  ++ PK+V++L   +   VA G + + V+ E G++ ++G G  
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYF 174

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH    D +        TP++V  ++Q     V            HT  LT+S +++
Sbjct: 175 GQLGHGDETDRK--------TPKMVKGVQQCIAHEVACG-------THHTLMLTQSQEVW 219

Query: 401 AFGAGDKGQLGI 412
            +G+G+ G+LGI
Sbjct: 220 TWGSGEFGKLGI 231



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H+ A+   G +Y++GS   G+LGHG    +  P+ + SLQG  +   AAG   
Sbjct: 97  QVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFH 156

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           + +I + G +  +G   FG+  +G +  +   +P++V+ ++     + A G   T +L++
Sbjct: 157 SSVIIEGGNLLTWGGGYFGQLGHGDETDR--KTPKMVKGVQQCIAHEVACGTHHTLMLTQ 214

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
              V+T+  G   +LG   E    EP  ++  L+ + V+ I+ G  +  AL  +     +
Sbjct: 215 SQEVWTWGSGEFGKLGIGDEEKHAEP-IMITALQGVGVIHISTGGFHSAALTSEG---VL 270

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIE 252
           Y+ G G  G+LGHG    +  P ++E
Sbjct: 271 YTWGGGDKGQLGHGDENSQNIPVVVE 296



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           E+   +E +   AG  HS  +   G + ++G    GQLGHG   +   P+ ++ +Q    
Sbjct: 140 ESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIA 199

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            + A G   T++++ + +V+ +G   FG  + G+   +    P ++ +L+ + V+  + G
Sbjct: 200 HEVACGTHHTLMLTQSQEVWTWGSGEFG--KLGIGDEEKHAEPIMITALQGVGVIHISTG 257

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
            F +A L+ EG +YT+  G+  +LGH  E +           +NIPVV
Sbjct: 258 GFHSAALTSEGVLYTWGGGDKGQLGHGDENS-----------QNIPVV 294


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 175/347 (50%), Gaps = 39/347 (11%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G+VYS+G    GQLG G T ++ RP  + +L+   ++Q A G+G T+++S+ G VY +G+
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
              G   +G  G K V  P++VE+L+   +VQA  G++ TA ++ +G +YT+  G   +L
Sbjct: 67  GDDGRLGHGDNGWKYV--PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKL 124

Query: 182 GHHTEPNDVEPHPLLGTL---ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
           GH  E     P P +      E   V QIA G  + + L        VY+ G    G +G
Sbjct: 125 GHGNESG--HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGK---VYTWGDKENGVVG 179

Query: 239 HGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           H +    ++ PR++E  Q   +  V  AA  +H A +   G + TWG G++G LGHG E 
Sbjct: 180 HTNADGHQYLPRMLESLQAKTVTQV--AACGFHTAALTAAGEIFTWGEGKFGRLGHGMER 237

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVV-----------SEDGDVYSFGCGESASLGHN 346
            + VP++V+AL   +  HVA G + +  +            E G VY+FG G+   LGH 
Sbjct: 238 NQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHG 297

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            +          V  P LV  L  V   VV+++      +N HT AL
Sbjct: 298 DV--------RKVSVPTLVAGL--VKMHVVKVA-----SYNEHTAAL 329



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 20/285 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G GH++ ++  G VY++G    G+LGHG    ++ PR + +L+G RI+QA  G+  
Sbjct: 44  QVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYH 103

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVL 164
           T  ++D G++Y +G   +G+  +G +      +P +V+ L++    V Q A G+  T VL
Sbjct: 104 TAAVTDKGELYTWGGGMYGKLGHGNESGH--PTPCMVKHLRDEGARVTQIACGSRHTVVL 161

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G+VYT+    +  +GH           +L +L+   V Q+AA  C     A   +G 
Sbjct: 162 TDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAA--CGFHTAALTAAG- 218

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---------- 274
            +++ G G  G+LGHG   ++  PR++E   L+  +   VA G +H+A +          
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMVPRMVE--ALMGKRVGHVACGGFHSAAILDSGELYTWG 276

Query: 275 -GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
            G+ G+V T+G G +G LGHG+    SVP +V  L  +  + VA+
Sbjct: 277 GGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVAS 321



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 22/299 (7%)

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           AG VY++G+   G+   G+  T     P LV++LK+  VVQ A G+  T VLS +G VYT
Sbjct: 6   AGLVYSWGRGEDGQ--LGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYT 63

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +  G+D RLGH        P  ++  LE   +VQ   G  +  A+  +     +Y+ G G
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPR-IVEALEGQRIVQATCGSYHTAAVTDKGE---LYTWGGG 119

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           + GKLGHG+ +    P +++  +    +   +A G+ H  V+   G+V TWG    G +G
Sbjct: 120 MYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVG 179

Query: 293 HGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           H N +  + +P+++++L       VA   + T  ++  G+++++G G+   LGH      
Sbjct: 180 HTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGM---- 235

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                 N + P++V +L  + +RV  ++         H+ A+ +SG+LY +G G+ GQ+
Sbjct: 236 ----ERNQMVPRMVEAL--MGKRVGHVACGG-----FHSAAILDSGELYTWGGGEHGQV 283



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 22/253 (8%)

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VY++  G D +LG   + ND +   L+  L++  VVQ+A G  + + L+      AVY
Sbjct: 7   GLVYSWGRGEDGQLGL-GDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLS---EDGAVY 62

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G  G+LGHG    +  PR++E  +    + V    G++H A V   G + TWG G 
Sbjct: 63  TWGRGDDGRLGHGDNGWKYVPRIVEALE--GQRIVQATCGSYHTAAVTDKGELYTWGGGM 120

Query: 288 YGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           YG LGHGNE     P +V+ L D   +   +A G   T V+++ G VY++G  E+  +GH
Sbjct: 121 YGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                   N   +   P+++ SL+   + V Q++         HT ALT +G+++ +G G
Sbjct: 181 T-------NADGHQYLPRMLESLQA--KTVTQVAACG-----FHTAALTAAGEIFTWGEG 226

Query: 406 DKGQLGIELVNNQ 418
             G+LG  +  NQ
Sbjct: 227 KFGRLGHGMERNQ 239



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 104
           +Q   G  H++ +T  G VY++G   +G +GH   +  ++ PR + SLQ   + Q AA  
Sbjct: 149 TQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG 208

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++ AG+++ +G+  FG   +G++  ++V  P++VE+L    V   A G F +A +
Sbjct: 209 FHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV--PRMVEALMGKRVGHVACGGFHSAAI 266

Query: 165 -----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
                         G+VYTF  G+  +LG H +   V    L+  L  + VV++A+   +
Sbjct: 267 LDSGELYTWGGGEHGQVYTFGNGDHGKLG-HGDVRKVSVPTLVAGLVKMHVVKVASYNEH 325

Query: 214 LLALACQPSGMAVYS 228
             ALA   S     S
Sbjct: 326 TAALAGASSSTPALS 340


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 11/307 (3%)

Query: 46  SQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           S   +G  +S+A++  +  VYS+G    G+LGHG   + + P+PIR+L G  I++ A G 
Sbjct: 69  SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGD 128

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T+ ++D G++++FG++  G+   G     ++  PQ VESL+   V   A G   +   
Sbjct: 129 THTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL--PQPVESLRGQEVTSIACGGEHSLAA 186

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G V+ + WG    LG     +   P  + G LE + V  +A G+ +  ++A   +G 
Sbjct: 187 TSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRH--SIAADETG- 242

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           AVY+ G    G+LGHG   D+  P+ +E    L    +V+ AG W H +     G++ +W
Sbjct: 243 AVYTFGWSKYGQLGHGDCIDQLVPKAVES---LKDSRIVLIAGGWRHTSAADDSGKLYSW 299

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G LG G+    + P  VQ LN      ++ G   TF V+E GDV+S+G G +  L
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQL 359

Query: 344 GHNAIAD 350
           GHN   D
Sbjct: 360 GHNEPKD 366



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 14/297 (4%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            A   R   +   G  H++AVT  G ++SFG N +GQLG GTT +   P+P+ SL+G  +
Sbjct: 114 RALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEV 173

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
              A G   ++  + AG V+A+G   +G    G    + +  P  V  L+ + V   A G
Sbjct: 174 TSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHL--PSQVHGLEGVKVTSVACG 231

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +      G VYTF W    +LGH    + + P  +  +L++  +V IA G+ +    
Sbjct: 232 WRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVE-SLKDSRIVLIAGGWRH--TS 288

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQ 276
           A   SG  +YS G    G+LG GS TD   P  +   Q LN  PV + +  W H   V +
Sbjct: 289 AADDSGK-LYSWGWNKFGQLGIGSNTDSNAPVPV---QGLNTSPVKLLSCGWRHTFAVTE 344

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN----DVKAIHVATGDYTTFVVSED 329
            G V +WG G  G LGH   +  + P  +  L+     ++ + V+    TT+V   D
Sbjct: 345 AGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASPLTTYVPPAD 401



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 149/324 (45%), Gaps = 26/324 (8%)

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           ++  +R+   + G+  ++ +   G   ++G+   G+  +G    +    P+ +  L    
Sbjct: 10  AVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEER--KKPRAIFHLMQAS 67

Query: 151 VVQAAIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIA 208
                 G  ++  LS+    VY++ WG+  RLGH  + NDV  P P+   L    +V++A
Sbjct: 68  CSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGH-GDCNDVFIPQPIR-ALAGRNIVKVA 125

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G  + LA+        ++S G    G+LG G+ +D   P+ +E   L   +   +A G 
Sbjct: 126 CGDTHTLAVT---DTGELFSFGRNQNGQLGLGTTSDAILPQPVES--LRGQEVTSIACGG 180

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
            H+      G V  WGWGRYG LG G  E   +P  V  L  VK   VA G   +    E
Sbjct: 181 EHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADE 240

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY+FG  +   LGH    D         L P+ V SLK  + R+V I+      W  
Sbjct: 241 TGAVYTFGWSKYGQLGHGDCID--------QLVPKAVESLK--DSRIVLIAGG----WR- 285

Query: 389 HTFALTESGKLYAFGAGDKGQLGI 412
           HT A  +SGKLY++G    GQLGI
Sbjct: 286 HTSAADDSGKLYSWGWNKFGQLGI 309


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 183/392 (46%), Gaps = 33/392 (8%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           RR+     AG  HS+A+ S  +V S+G    GQLGHG  EE   P  + +L    I    
Sbjct: 13  RRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVT 72

Query: 102 AGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            GA  T  +S++ + VY++G   FG   +G      +  PQ +++LK + V Q A G+  
Sbjct: 73  CGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFI--PQPIKALKGLEVKQIACGDSH 130

Query: 161 TAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
              ++ +G V  +    + +LG  HTE + + PH L    E + V  +AAG  +  A+  
Sbjct: 131 CLAITTDGEVLGWGRNQNGQLGLGHTE-DVLTPHKLT-AFEGVAVKMLAAGAEHTTAVT- 187

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQD 277
                 +Y  G G  G LG G R D   P  +     +L+ +    VA G  H   V + 
Sbjct: 188 --ENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKM----VACGWRHTICVAES 241

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G + T+GW +YG LGHG+     +P  VQAL   K   +  G   TF +  DG +Y +G 
Sbjct: 242 GNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGW 301

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
            +   +G     D          +PQLV  L+     VVQ        W  HT A+T+ G
Sbjct: 302 NKFGQVGCGNTEDQS--------SPQLVKGLQDQVVTVVQCG------WR-HTLAMTDRG 346

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            +Y++G G  GQLG     +  +R  P+R++I
Sbjct: 347 NVYSWGRGTSGQLGH---GDTVDRSTPKRIEI 375



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 11/320 (3%)

Query: 44  ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           E S    G  H+ A++ S   VYS+G    G+LGHG + + + P+PI++L+G+ + Q A 
Sbjct: 67  EISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIAC 126

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    + I+  G+V  +G++  G+   G+  T+ V +P  + + + + V   A G   T 
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQ--LGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTT 184

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            ++  G++Y + WG    LG     + + P  +      + +  +A G+ + +   C   
Sbjct: 185 AVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL-MKMVACGWRHTI---CVAE 240

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVC 281
              +Y+ G    G+LGHG   D   P    Q Q L  + +    G W H   +  DGR+ 
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIPH---QVQALKSKKIQAITGGWRHTFALDSDGRLY 297

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WGW ++G +G GN E +S P++V+ L D     V  G   T  +++ G+VYS+G G S 
Sbjct: 298 GWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSG 357

Query: 342 SLGHNAIADGQGNRHANVLT 361
            LGH    D    +   +L+
Sbjct: 358 QLGHGDTVDRSTPKRIEILS 377



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 159/340 (46%), Gaps = 29/340 (8%)

Query: 91  SLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
           S +G+R  ++  +AGA  ++ +     V ++G+   G+  +G    +    P +V +L +
Sbjct: 8   SSRGVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF--PTIVSALDD 65

Query: 149 IFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
             +     G   T  LS   + VY++ WG+  RLGH    +   P P+   L+ + V QI
Sbjct: 66  CEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIK-ALKGLEVKQI 124

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + LA+        V   G    G+LG G   D   P  +  F+ + ++  ++AAG
Sbjct: 125 ACGDSHCLAITTDGE---VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVK--MLAAG 179

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           A H   V ++G++  WGWGRYG LG G+ E   VP  V A+       VA G   T  V+
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVA 239

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           E G++Y+FG  +   LGH   AD         L P  V +LK    + +         W 
Sbjct: 240 ESGNMYTFGWSKYGQLGHGDFADH--------LIPHQVQALKSKKIQAITGG------WR 285

Query: 388 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            HTFAL   G+LY +G    GQ+G     N  ++ +P+ V
Sbjct: 286 -HTFALDSDGRLYGWGWNKFGQVG---CGNTEDQSSPQLV 321


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 175/363 (48%), Gaps = 23/363 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S  VV SFG    GQLGHG  E+   PR I +L    I   A GA  T  
Sbjct: 12  AGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTA 71

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S     +Y++G   FG   +G      V  P  +++L+ + + Q A G+     ++ +G
Sbjct: 72  YSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIKALQGLEIRQIACGDSHCLAVTADG 129

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            VY++    + +LG     + + PH LL   E + V  +AAG  +  A+     G  +Y 
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVT---DGGKLYG 185

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P   E   + + +  +VA G  H   V Q G++ T+GW +Y
Sbjct: 186 WGWGRYGNLGLGDRGDRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+     +P  V AL +     V+ G   T  ++E G +Y +G  +   +G   +
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDV 303

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D          +PQL+ S+   ++RVVQ+S      W  HT A+T+   +Y++G G  G
Sbjct: 304 DDHT--------SPQLI-SIPGQHQRVVQVSCG----WR-HTVAVTDKNNVYSWGRGTSG 349

Query: 409 QLG 411
           QLG
Sbjct: 350 QLG 352



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 27/335 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  T+ +     V +FG+   G+  +G    + +  P+++ +L +  +   A
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL--PRIIGALNDCEISLVA 63

Query: 156 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G +  TA  +    +Y++ WG+  RLGH    +   PHP+   L+ + + QIA G  + 
Sbjct: 64  CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+        VYS G    G+LG G   D   P  +  F+ ++++  ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              G++  WGWGRYG LG G+     +P  V A+ D K   VA G   T  VS+ G +Y+
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH   AD         L P  V +L + N  + Q+S      W  HT ALT
Sbjct: 238 YGWSKYGQLGHGDYAD--------HLLPHQVAALAEFN--ITQVSGG----WR-HTVALT 282

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           E+GKLY +G    GQ+G   V++ T   +P+ + I
Sbjct: 283 EAGKLYGWGWNKFGQVGSGDVDDHT---SPQLISI 314



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 13/269 (4%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  H +AVT+ G VYS+G N +GQLG G T++   P  + + +G+ +   AAG
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAG 170

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           A  T  ++D G++Y +G   +G    G +G +++  P  V ++ +  +   A G   T  
Sbjct: 171 AEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAVGDEKMCMVACGWRHTIA 228

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +S+ G++YT+ W    +LGH    + + PH  +  L    + Q++ G+ + +AL      
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLPHQ-VAALAEFNITQVSGGWRHTVALT---EA 284

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +Y  G    G++G G   D   P+LI    Q Q +    V V+ G  H   V     V
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV----VQVSCGWRHTVAVTDKNNV 340

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN 309
            +WG G  G LGHG+    S PK +QAL+
Sbjct: 341 YSWGRGTSGQLGHGDAVDRSAPKGIQALS 369



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 16/312 (5%)

Query: 44  ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           E S    G  H+ A + ++  +YS+G    G+LGHG + + + P PI++LQG+ I Q A 
Sbjct: 58  EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIAC 117

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    + ++  G+VY++G++  G+   G     LV  P  + + + + V   A G   TA
Sbjct: 118 GDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLAFEGVSVKMLAAGAEHTA 175

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQ 220
            ++  G++Y + WG    LG     + + P   P +G   +  +  +A G+ + +A++  
Sbjct: 176 AVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEKMCMVACGWRHTIAVS-- 230

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGR 279
            SG  +Y+ G    G+LGHG   D   P  +      N+  V   +G W H   + + G+
Sbjct: 231 QSG-KLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV---SGGWRHTVALTEAGK 286

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           +  WGW ++G +G G+ +  + P+++       + + V+ G   T  V++  +VYS+G G
Sbjct: 287 LYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346

Query: 339 ESASLGHNAIAD 350
            S  LGH    D
Sbjct: 347 TSGQLGHGDAVD 358


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 189/392 (48%), Gaps = 33/392 (8%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           RR      AG  H++A+ S  +V S+G    GQLGHG  EE   P  I +L    I    
Sbjct: 13  RRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSIT 72

Query: 102 AGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            GA  T   S++ + VY++G   FG   +G      +  P+ ++ LK + + Q A G+  
Sbjct: 73  CGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFI--PRAIKGLKGLEIKQIACGDSH 130

Query: 161 TAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
              ++ +G V+++    + +LG  HTE  DV     +   E I V  +AAG  +  A+  
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTE--DVLVPNKVAAFEGIAVKMLAAGAEHTAAVT- 187

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQD 277
             SG  +Y  G G  G LG G R D   P  +     + +NL    VA G  H   V   
Sbjct: 188 -ESGK-LYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL----VACGWRHTIAVANS 241

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G + T+GW +YG LGHG+ E   VP  VQAL +     V+ G   T  + EDG++Y +G 
Sbjct: 242 GNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGW 301

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
            +   +G     D          +P+L+T +  VNE+V +++      W  HT A+T+ G
Sbjct: 302 NKFGQVGCGNTDDHN--------SPKLITGI--VNEKVTRVTCG----WR-HTVAITDRG 346

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            +Y++G G  GQLG     +  +R  P+R+++
Sbjct: 347 NVYSWGRGTSGQLGH---GDAVDRCVPKRIEL 375



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 8/266 (3%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  H +A+T  G V+S+G N +GQLG G TE+   P  + + +GI +   AAG
Sbjct: 120 EIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAG 179

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           A  T  ++++G++Y +G   +G    G +  +LV  P  V ++    +   A G   T  
Sbjct: 180 AEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLV--PGEVAAVPGEKMNLVACGWRHTIA 237

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           ++  G +YTF W    +LGH    + + PH +   L+N  +  ++ G+ + +AL      
Sbjct: 238 VANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVAL---DED 293

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             +Y  G    G++G G+  D   P+LI    ++N +   V  G  H   +   G V +W
Sbjct: 294 GELYGWGWNKFGQVGCGNTDDHNSPKLIT--GIVNEKVTRVTCGWRHTVAITDRGNVYSW 351

Query: 284 GWGRYGCLGHGNEECESVPKVVQALN 309
           G G  G LGHG+     VPK ++ L+
Sbjct: 352 GRGTSGQLGHGDAVDRCVPKRIELLS 377


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 23/363 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S  VV SFG    GQLGHG  E+   PR I +L    I   A GA  T  
Sbjct: 12  AGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTA 71

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S     +Y++G   FG   +G      V  P  +++L+ + + Q A G+     ++ +G
Sbjct: 72  YSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIKALQGLEIRQIACGDSHCLAVTADG 129

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            VY++    + +LG     + + PH LL   E + V  +AAG  +  A+    SG  +Y 
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVT--DSG-KLYG 185

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P   E   + + +  +VA G  H   V Q G++ T+GW +Y
Sbjct: 186 WGWGRYGNLGLGDRGDRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+     +P  V AL +     V+ G   T  ++E G +Y +G  +   +G   +
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDV 303

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D          +PQL+ S+   ++RVVQ+S      W  HT A+T+   +Y++G G  G
Sbjct: 304 DDHT--------SPQLI-SIPGQHQRVVQVSCG----WR-HTVAVTDKNNVYSWGRGTSG 349

Query: 409 QLG 411
           QLG
Sbjct: 350 QLG 352



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 169/335 (50%), Gaps = 27/335 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  T+ +     V +FG+   G+  +G    +L+  P+++ +L +  +   A
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLL--PRIIGALNDCEISLVA 63

Query: 156 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G +  TA  +    +Y++ WG+  RLGH    +   PHP+   L+ + + QIA G  + 
Sbjct: 64  CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+        VYS G    G+LG G   D   P  +  F+ ++++  ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              G++  WGWGRYG LG G+     +P  V A+ D K   VA G   T  VS+ G +Y+
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH   AD         L P  V +L + N  + Q+S      W  HT ALT
Sbjct: 238 YGWSKYGQLGHGDYADH--------LLPHQVAALAEFN--ITQVSGG----WR-HTVALT 282

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           E+GKLY +G    GQ+G   V++ T   +P+ + I
Sbjct: 283 EAGKLYGWGWNKFGQVGSGDVDDHT---SPQLISI 314



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 13/269 (4%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  H +AVT+ G VYS+G N +GQLG G T++   P  + + +G+ +   AAG
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAG 170

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           A  T  ++D+G++Y +G   +G    G +G +++  P  V ++ +  +   A G   T  
Sbjct: 171 AEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAVGDEKMCMVACGWRHTIA 228

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +S+ G++YT+ W    +LGH    + + PH  +  L    + Q++ G+ + +AL      
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLPHQ-VAALAEFNITQVSGGWRHTVALT---EA 284

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +Y  G    G++G G   D   P+LI    Q Q +    V V+ G  H   V     V
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV----VQVSCGWRHTVAVTDKNNV 340

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN 309
            +WG G  G LGHG+    S PK +QAL+
Sbjct: 341 YSWGRGTSGQLGHGDAVDRSAPKGIQALS 369



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 19/328 (5%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRP 86
           +L+ R + A   C   E S    G  H+ A + ++  +YS+G    G+LGHG + + + P
Sbjct: 45  RLLPRIIGALNDC---EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVP 101

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
            PI++LQG+ I Q A G    + ++  G+VY++G++  G+   G     LV  P  + + 
Sbjct: 102 HPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLAF 159

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPV 204
           + + V   A G   TA ++  G++Y + WG    LG     + + P   P +G   +  +
Sbjct: 160 EGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEKM 216

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             +A G+ + +A++   SG  +Y+ G    G+LGHG   D   P  +      N+  V  
Sbjct: 217 CMVACGWRHTIAVS--QSG-KLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV-- 271

Query: 265 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYT 322
            +G W H   + + G++  WGW ++G +G G+ +  + P+++       + + V+ G   
Sbjct: 272 -SGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRH 330

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIAD 350
           T  V++  +VYS+G G S  LGH    D
Sbjct: 331 TVAVTDKNNVYSWGRGTSGQLGHGDAVD 358


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  SL  +R IQ A G      ++  G+VY+ G 
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 3991

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++F+ + A+  G      LS EG VY++  G+D 
Sbjct: 3992 GAAGR--LGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH    +   P  L+  L  I +V IA G  +  A+    S   +Y+ G G  G+LGH
Sbjct: 4050 KLGHGNRLSYDRPK-LVEDLLGIEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4105

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+++E  Q   +  V   +G      V  D  V +WG G YG LG G  +  
Sbjct: 4106 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4165

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  I V  G   +  ++  G VY++G G+   LGH            +V
Sbjct: 4166 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4217

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4218 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4262



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 8/313 (2%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT+ G VYS G  ++G+LG G T+    P  + S+Q + I + A  +G    + +S  
Sbjct: 3978 FAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G VY++G+   G+  +G + +     P+LVE L  I +V  A G   +A ++  G +YT+
Sbjct: 4038 GHVYSWGEGDDGKLGHGNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTW 4095

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  ++  L++  V+ +A G      L C      V+S G G 
Sbjct: 4096 GKGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGD 4153

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  I+   L  L  + V  G+  +  + + G V TWG G Y  LGH
Sbjct: 4154 YGKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4211

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G ++    P+ V AL   K I +ATG       S+ G+V+++G  +   LG    +  Q 
Sbjct: 4212 GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQR 4271

Query: 354  NRHANVLTPQLVT 366
             R  + L  + +T
Sbjct: 4272 PRLVHALQGKKIT 4284



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 182/362 (50%), Gaps = 33/362 (9%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAG 114
            A   +  VY +G N   QLG G    + +  P+RS  L  ++ I  A G+    ++S  G
Sbjct: 2946 APPQQSAVYVWGLNDKDQLG-GLKGSKIKI-PVRSEVLSKLKPIHIAGGSKTLFIVSQEG 3003

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
            ++YA G+ + G    G+     +  P+L+  L    + + A+  G      L+++G+V++
Sbjct: 3004 KLYACGEGTNGR--LGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 3061

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            +  G D +LGH       +P  L+ +L++  +  IA G  +  A+A   S   +Y+ G G
Sbjct: 3062 WGEGEDGKLGHGNCTTLDKPR-LIESLKSKRIRDIACGSGHSAAIA---SNGELYTWGLG 3117

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG--QDGRVCTWGWGRYG 289
              G+LGHG    +  P+L+   Q L+ Q VV VA G+  A  +    DG V TWG G +G
Sbjct: 3118 EYGRLGHGDTATQMKPKLV---QALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFG 3174

Query: 290  CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
             LG G  +    P +V  LN +  + V  G   +  +++ G+V+++G G+   LGH    
Sbjct: 3175 KLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH---- 3230

Query: 350  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               GN H +V  P LV  L+   +++V +++        H  A+T++G++YA+G  D GQ
Sbjct: 3231 ---GNDH-HVRKPTLVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQ 3279

Query: 410  LG 411
             G
Sbjct: 3280 QG 3281



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   ++ + S+ G +Y+ G  ++G+LG G       P+  P  S   I+ +   +G  
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGK 3048

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G   T  +  P+L+ESLK+  +   A G+  +A ++
Sbjct: 3049 HALALTQDGKVFSWGEGEDGKLGHGNCTT--LDKPRLIESLKSKRIRDIACGSGHSAAIA 3106

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+  L    VVQ+A G      ++    G  
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPK-LVQALSGQRVVQVACGSRDAQTMSLTADG-C 3164

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VY+ G G  GKLG G       P L+++   L +  V V  GA  +  + + G V TWG 
Sbjct: 3165 VYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3222

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY++G  +    G+
Sbjct: 3223 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3282

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                    NR      P LV  L       V    ++SI W
Sbjct: 3283 GTTI---VNRK-----PSLVHELDDTRMNRVSCGSSHSIAW 3315



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 12/281 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ +  L GI I+  A G   +  
Sbjct: 4026 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAA 4085

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L   P++VE+L++  V+  A G  +  T  ++ +
Sbjct: 4086 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4143

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
              V+++  G+  +LG     +D    PL + +L  + V+++  G  + +AL    SG AV
Sbjct: 4144 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT--RSG-AV 4198

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            Y+ G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG  
Sbjct: 4199 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4256

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              G LG G       P++V AL   K   VA G   T   S
Sbjct: 4257 DEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4297



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 148/310 (47%), Gaps = 35/310 (11%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVL 164
           +++S +G VY     S  E +Y          PQ + S  +     +   + G  + A L
Sbjct: 478 LILSLSGNVYIMYYGS--ETQY----------PQRMHSFSDKPVTMIASHSDGKHYLA-L 524

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +++G VY++  G+  RLGH    +  EP  L+ TL    ++ IA G  Y  AL+   SG 
Sbjct: 525 TQDGCVYSWGNGDGGRLGHGDNISHDEPK-LIETLLEKNIIFIACGSTYSAALSA--SG- 580

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y+ G G  G+LGHGS  D   P L+   +   +  V   +G      V   G V +WG
Sbjct: 581 ELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWG 640

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G YG LG G  +    PK+V  L D+  + V  G   +  ++  G+VY++G G++  LG
Sbjct: 641 DGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLG 700

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H       GN   +V  P+L+ SL+  ++++  +S+  +     H  ALTE   +Y +G 
Sbjct: 701 H-------GNEE-HVRYPKLIESLR--DKKIKDLSVGGT-----HILALTEDQFVYGWGR 745

Query: 405 GDKGQLGIEL 414
            D GQ+   L
Sbjct: 746 NDYGQIDPTL 755



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 135/299 (45%), Gaps = 41/299 (13%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V A+G   FG            +SP   +++  + +           +LS  G VY   
Sbjct: 441 EVLAWGGVKFGNG----------SSPFYCDAIAELGIKHLCCTERALLILSLSGNVYIMY 490

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           +G++ +               + +  + PV  IA+       LA    G  VYS G G G
Sbjct: 491 YGSETQYPQR-----------MHSFSDKPVTMIASHSDGKHYLALTQDG-CVYSWGNGDG 538

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LGHG       P+LIE   LL    + +A G+ ++A +   G + TWG G YG LGHG
Sbjct: 539 GRLGHGDNISHDEPKLIET--LLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHG 596

Query: 295 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           + +  +VP +V  L     +HVA  +GD  T  V+  G V+S+G G+   LG    +DG 
Sbjct: 597 SNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-SDGS 655

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   TP++V  L  +N  VV++           + ALT  G++Y +G GD  +LG
Sbjct: 656 K-------TPKIVDKLLDIN--VVRVFCGGQF-----SAALTARGEVYTWGKGDAYRLG 700



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T  G VYS+G+   G+LGHG       P+ I +L    II  A G+  +  +S +
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSAS 579

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G      VT P LV +LK   VV  A G+  +  L        F
Sbjct: 580 GELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+    +LG         P  ++  L +I VV++  G  +  AL  +     VY+ G 
Sbjct: 638 SWGDGDYGKLGRGGSDGSKTPK-IVDKLLDINVVRVFCGGQFSAALTARGE---VYTWGK 693

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHG+    ++P+LIE  +   ++ + V  G  H   + +D  V  WG   YG +
Sbjct: 694 GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSV--GGTHILALTEDQFVYGWGRNDYGQI 751

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                   S P +   L+    I +A+G   +F
Sbjct: 752 DPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSF 784



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS +G    + WG++ R  LG         P P   +L  +  +Q+A G   L A+   
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPC-ESLSALRPIQLAGGEQTLFAVT-- 3981

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   VYS G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3982 -ADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG G  G LGHGN      PK+V+ L  ++ + +A G + +  ++  G +Y++G G  
Sbjct: 4041 YSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH   +D Q       L P++V +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4101 GRLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4147

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4148 SWGDGDYGKLG 4158



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 99/169 (58%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+++ G +Y++G  + G+LGHG+ ++   P  + +L+G  ++  A G+G  +T+
Sbjct: 569 GSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTL 628

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+++G   +G+   G  G+    +P++V+ L +I VV+   G  F+A L+  G
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRG--GSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            VYT+  G+  RLGH  E +   P  L+ +L +  +  ++ G  ++LAL
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPK-LIESLRDKKIKDLSVGGTHILAL 734



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G    G+LG G ++    P+ +  L  I +++   G   +  
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAA 681

Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VY +GK   G+A   G    + V  P+L+ESL++  +   ++G      L+ + 
Sbjct: 682 LTARGEVYTWGK---GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQ 738

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
            VY +   +  ++     P   EP  L  TL +  V+ +A+G
Sbjct: 739 FVYGWGRNDYGQIDPTLGPVVSEPS-LCPTLSSKNVIGLASG 779



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H +A + KG V+++G N  GQLG GTT    RPR + +LQG +I + A G+  T+  
Sbjct: 4237 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAW 4296

Query: 111  SDA 113
            S A
Sbjct: 4297 STA 4299


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 174/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  SL  +R IQ A G      ++  G+VY+ G 
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 4002

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++F+ + A+  G      LS EG VY++  G+D 
Sbjct: 4003 GAAGR--LGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH  + +   P  L+  L  + ++ IA G  +  A+    S   +Y+ G G  G+LGH
Sbjct: 4061 KLGHGNKMSYDRPK-LIEDLLGVEIIDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4116

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+++E  Q   +  V   +G      V  D  V +WG G YG LG G  +  
Sbjct: 4117 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4176

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  I V  G   +  ++  G VY++G G+   LGH            +V
Sbjct: 4177 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4228

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4229 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4273



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 176/355 (49%), Gaps = 27/355 (7%)

Query: 61   KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            +  VY +G N   QLG     +   P     L  ++ I  A G+    ++S  G++YA G
Sbjct: 2960 ESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3019

Query: 121  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 178
            + + G    G+     V  P+ +  L    + + A+  G      L+++G+V+++  G D
Sbjct: 3020 EGTNGR--LGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3077

Query: 179  ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
             +LGH    +  +P  L+ TL++  +  IA G  +  A+A   S   +Y+ G G  G+LG
Sbjct: 3078 GKLGHGNNMSLDKPK-LIETLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLG 3133

Query: 239  HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE 296
            HG    +  P+L++   L+  + V VA G+  A  +    DG V +WG G +G LG G  
Sbjct: 3134 HGDTVTQARPKLVQT--LVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 3191

Query: 297  ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
            +    P VV+ LN +  + V  G   +  +++ G+V+++G G+   LGH       GN H
Sbjct: 3192 DGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH 3244

Query: 357  ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +V  P LV  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3245 -HVRKPTLVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3291



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 162/342 (47%), Gaps = 19/342 (5%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 105
            IAG   ++ + S+ G +Y+ G  ++G+LG G       P+PI  L    I + A  +G  
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGK 3058

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G   +  +  P+L+E+LK+  +   A G+  +A ++
Sbjct: 3059 HALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACGSGHSAAIA 3116

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH        P  L+ TL    VVQ+A G      +A    G  
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPK-LVQTLVGHRVVQVACGSRDAQTMALTTDG-C 3174

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P ++E+   L +  V V  GA  +  + + G V TWG 
Sbjct: 3175 VYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3232

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY++G  +      
Sbjct: 3233 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--- 3289

Query: 346  NAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 386
                  QGN   +V   P LV  L+      V    ++SI W
Sbjct: 3290 ------QGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIAW 3325



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 8/291 (2%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT+ G VYS G  ++G+LG G T+    P  + S+Q + I + A  +G    + +S  
Sbjct: 3989 FAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE 4048

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G VY++G+   G+  +G + +     P+L+E L  + ++  A G   +A ++  G +YT+
Sbjct: 4049 GHVYSWGEGDDGKLGHGNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTW 4106

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  ++  L++  V+ +A G      L C      V+S G G 
Sbjct: 4107 GKGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGD 4164

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  I+   L  L  + V  G+  +  + + G V TWG G Y  LGH
Sbjct: 4165 YGKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4222

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G ++    P+ V AL   K I +ATG       S+ G+V+++G  +   LG
Sbjct: 4223 GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4273



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I  L G+ II  A G   +  
Sbjct: 4037 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAA 4096

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L   P++VE+L++  V+  A G  +  T  ++ +
Sbjct: 4097 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4154

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
              V+++  G+  +LG     +D    PL + +L  + V+++  G  + +AL    SG AV
Sbjct: 4155 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT--RSG-AV 4209

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            Y+ G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG  
Sbjct: 4210 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4267

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              G LG G       P++V AL   K   VA G   T   S
Sbjct: 4268 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4308



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 17/277 (6%)

Query: 135  KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
            +L TS   + S   +   Q A+     A   +E  VY +   +  +LG   + + ++   
Sbjct: 2928 QLTTSVSFLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLGG-LKGSKIKLPV 2986

Query: 195  LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
                L  +  + IA G   L  ++ +     +Y+ G G  G+LG G   +   P+ I   
Sbjct: 2987 YSEVLSKLKPIHIAGGSKTLFIVSQEGK---LYACGEGTNGRLGLGDDNNVCEPKPIPFL 3043

Query: 255  QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                ++ V V +G  HA  + QDG+V +WG G  G LGHGN      PK+++ L   +  
Sbjct: 3044 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR 3103

Query: 315  HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
             +A G   +  ++ +G++Y++G GE   LGH     G     A    P+LV +L  V  R
Sbjct: 3104 DIACGSGHSAAIASNGELYTWGLGEYGRLGH-----GDTVTQAR---PKLVQTL--VGHR 3153

Query: 375  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            VVQ++  +    +A T ALT  G +Y++G GD G+LG
Sbjct: 3154 VVQVACGSR---DAQTMALTTDGCVYSWGDGDFGKLG 3187



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T  G VYS+G+   G+LGHG T     P+ I +L    I+  A G+  +  +S +
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVS 579

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G     ++  P LV +LK   VV  A G+  +  L        F
Sbjct: 580 GELYTWGRGNYGRLGHGNFDDVMI--PTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 637

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+    +LG         P  ++  L +I VV++  G  +  AL        VY+ G 
Sbjct: 638 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGSQFSAALTAHGE---VYTWGK 693

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHGS    ++P++IE  +   ++ + V  GA H  V+ +D  V  WG   YG +
Sbjct: 694 GDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSV--GATHILVLTEDQFVYGWGRNDYGQI 751

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                   S P +   L+    I +A+G   +F
Sbjct: 752 DPTLGSVISEPTLCPTLSSKTVIGLASGPTQSF 784



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 138/310 (44%), Gaps = 35/310 (11%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 164
           M++S  G VY     S  E +Y          PQ V    +  V   A    G    A L
Sbjct: 478 MILSLNGNVYNMYHGS--ETQY----------PQRVHGFSDKLVTMIASHSDGKHHLA-L 524

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +++G VY++  G+  RLGH    +  EP  +   LE   +V IA G  Y  AL+   SG 
Sbjct: 525 TQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEK-NIVFIACGSTYSAALSV--SG- 580

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y+ G G  G+LGHG+  D   P L+   +   +  V   +G      V   G V +WG
Sbjct: 581 ELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWG 640

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G YG LG G  +    PK+V  L D+  + V  G   +  ++  G+VY++G G++  LG
Sbjct: 641 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG 700

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H +          +V  P+++ SL+    + + +  T       H   LTE   +Y +G 
Sbjct: 701 HGS--------EEHVRYPKIIESLRDKKIKDLSVGAT-------HILVLTEDQFVYGWGR 745

Query: 405 GDKGQLGIEL 414
            D GQ+   L
Sbjct: 746 NDYGQIDPTL 755



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS +G    + WG++ R  LG    P    P P   +L  +  +Q+A G   L A+    
Sbjct: 3937 LSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTADG 3995

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
                VYS G G  G+LG G       P L+E  Q + ++ V V++G  H   +  +G V 
Sbjct: 3996 K---VYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVY 4052

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG G  G LGHGN+     PK+++ L  V+ I +A G + +  ++  G +Y++G G   
Sbjct: 4053 SWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYG 4112

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH   +D Q       L P++V +L+  + +V+ ++  +    +A T  +T+   +++
Sbjct: 4113 RLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4159

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4160 WGDGDYGKLG 4169



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 98/169 (57%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A++  G +Y++G  + G+LGHG  ++   P  + +L+G  ++  A G+G  +T+
Sbjct: 569 GSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTL 628

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+++G   +G+   G  GT    +P++V+ L +I VV+   G+ F+A L+  G
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 686

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            VYT+  G+  RLGH +E +   P  ++ +L +  +  ++ G  ++L L
Sbjct: 687 EVYTWGKGDTYRLGHGSEEHVRYPK-IIESLRDKKIKDLSVGATHILVL 734



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 22/207 (10%)

Query: 211 YCYLLA------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           YC  +A      L C    + + S+  G    + HGS T  ++P+ +  F    +  +  
Sbjct: 458 YCDAIAELGIKQLCCTERALMILSLN-GNVYNMYHGSET--QYPQRVHGFSDKLVTMIAS 514

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +   H   + QDG V +WG G  G LGHG+      PK+++AL +   + +A G   + 
Sbjct: 515 HSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSA 574

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +S  G++Y++G G    LGH    D        V+ P LVT+LK     VV ++  +  
Sbjct: 575 ALSVSGELYTWGRGNYGRLGHGNFDD--------VMIPTLVTTLK--GHTVVHVACGSG- 623

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLG 411
             ++ T  +T SG ++++G GD G+LG
Sbjct: 624 --DSQTLCVTASGIVFSWGDGDYGKLG 648



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G    G+LG G T+    P+ +  L  I +++   G+  +  
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAA 681

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G+VY +GK       +G +  + V  P+++ESL++  +   ++G     VL+ +  
Sbjct: 682 LTAHGEVYTWGKGDTYRLGHGSE--EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQF 739

Query: 170 VYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           VY   WG ND      T  + +    L  TL +  V+ +A+G
Sbjct: 740 VY--GWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASG 779



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G +I+  A GA  
Sbjct: 3210 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALH 3269

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L++  V + + G+
Sbjct: 3270 CLAVTDTGQVYAWGDNDHGQQGNGT--TSVNRKPSLVHELEDARVNRVSCGS 3319



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H +A + KG V+++G N  GQLG GTT    RPR + +LQG +I + A G+  T+  
Sbjct: 4248 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAW 4307

Query: 111  SDA 113
            S A
Sbjct: 4308 STA 4310



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   G   S A+T+ G VY++G   + +LGHG+ E    P+ I SL+  +I   + GA  
Sbjct: 671 KVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATH 730

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            +++++   VY +G++ +G+ +  +    +++ P L  +L +  V+  A G
Sbjct: 731 ILVLTEDQFVYGWGRNDYGQIDPTLGS--VISEPTLCPTLSSKTVIGLASG 779


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  SL  +R IQ A G      ++  G++Y+ G 
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGY 4053

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++F+ + A+  G      LS EG VY++  G+D 
Sbjct: 4054 GAAGR--LGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH  + +   P  L+  L  + +V IA G  +  A+    S   +Y+ G G  G+LGH
Sbjct: 4112 KLGHGNKVSYDRPK-LIEDLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4167

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+++E  Q   +  V   +G      V  D  V +WG G YG LG G  +  
Sbjct: 4168 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4227

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  ++  G VY++G G+   LGH            +V
Sbjct: 4228 KVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4279

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4280 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4324



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 27/355 (7%)

Query: 61   KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            +  VY +G N   QLG     +   P    +L  ++ I  A G+    ++S  G++YA G
Sbjct: 3011 QSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3070

Query: 121  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 178
            + + G    G+     +  P+ +  L    + + A+  G      L+++G+V+++  G D
Sbjct: 3071 EGTNGR--LGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128

Query: 179  ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
             +LGH    +  +P  L+  L++  +  IA G  +  A+A   S   +Y+ G G  G+LG
Sbjct: 3129 GKLGHGNCISLDKPK-LIEVLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLG 3184

Query: 239  HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE 296
            HG    +  P+L++   L+  + V VA G+  A  +    DG V +WG G +G LG G  
Sbjct: 3185 HGDTITQTRPKLVQA--LIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGS 3242

Query: 297  ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
            +    P +V  LN++  I V  G   +  +++ G+V+++G G+   LGH       GN H
Sbjct: 3243 DGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH 3295

Query: 357  ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +V  P LV  L+   ++++ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3296 -HVRKPTLVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3342



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 8/291 (2%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT+ G +YS G  ++G+LG G T+    P  + S+Q + I + A  +G    + +S  
Sbjct: 4040 FAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE 4099

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G VY++G+   G+  +G + +     P+L+E L  + +V  A G   +A ++  G +YT+
Sbjct: 4100 GHVYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTW 4157

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  ++  L++  V+ +A G      L C      V+S G G 
Sbjct: 4158 GKGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGD 4215

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG G Y  LGH
Sbjct: 4216 YGKLGRGGSDGCKVPLKID--SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4273

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G ++    P+ V AL   K I +ATG       S+ G+V+++G  +   LG
Sbjct: 4274 GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4324



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 158/342 (46%), Gaps = 19/342 (5%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 105
            IAG   ++ + S+ G +Y+ G  ++G+LG G       P+ I  L    I + A  +G  
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGK 3109

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G      +  P+L+E LK+  +   A G+  +A ++
Sbjct: 3110 HALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEVLKSKRIRDIACGSGHSAAIA 3167

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH        P  L+  L    VVQ+A G      +A    G  
Sbjct: 3168 SNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALIGHRVVQVACGSRDAQTMALTTDGY- 3225

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P L+++    NL  + V  GA  +  + + G V TWG 
Sbjct: 3226 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLN--NLGVIQVECGAQFSLALTKYGEVWTWGK 3283

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY++G  +      
Sbjct: 3284 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--- 3340

Query: 346  NAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 386
                  QGN   +V   P LV  L+      V    ++SI W
Sbjct: 3341 ------QGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAW 3376



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H IA++S+G VYS+G    G+LGHG      RP+ I  L G+ I+  A G   +  
Sbjct: 4088 SGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 4147

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L   P++VE+L++  V+  A G  +  T  ++ +
Sbjct: 4148 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4205

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
              V+++  G+  +LG     +D    PL + +L  + VV++  G  + +AL    SG AV
Sbjct: 4206 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT--RSG-AV 4260

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            Y+ G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG  
Sbjct: 4261 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4318

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              G LG G       P++V AL   K   VA G   T   S
Sbjct: 4319 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4359



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 35/310 (11%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVL 164
           M++S  G VY     S  E +Y          PQ V    +     +   A G  + A L
Sbjct: 537 MILSLNGNVYNMYHGS--ETQY----------PQRVHGFSDKPITMIASHADGKHYLA-L 583

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +++G VY++  G+  RLGH    +  EP  +   LE   ++ IA G  Y  AL+   +  
Sbjct: 584 TQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEK-NIIFIACGSTYSAALS---ANG 639

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y+ G G  G+LGHG+  D   P L+   +   +  V   +G      V   G V +WG
Sbjct: 640 ELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWG 699

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G YG LG G  +    PK+V  L D+  + V  G   +  ++  G+VY++G G++  LG
Sbjct: 700 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG 759

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H +          +V  P+++ SL+  + +V  +S+  +     H  ALTE   +Y +G 
Sbjct: 760 HGS--------EEHVRYPKVIESLR--DRKVKDLSVGTT-----HILALTEDQFVYGWGR 804

Query: 405 GDKGQLGIEL 414
            D GQ+   L
Sbjct: 805 NDYGQIDPTL 814



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 135/299 (45%), Gaps = 41/299 (13%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V A+G   FG            ++P   +++  + + Q         +LS  G VY   
Sbjct: 500 EVLAWGGVKFGNG----------STPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMY 549

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            G++ +           P  + G   + P+  IA+       LA    G  VYS G G G
Sbjct: 550 HGSETQY----------PQRVHG-FSDKPITMIASHADGKHYLALTQDG-CVYSWGNGDG 597

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LGHG       P+LIE   LL    + +A G+ ++A +  +G + TWG G YG LGHG
Sbjct: 598 GRLGHGDTISYDEPKLIEA--LLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHG 655

Query: 295 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           N +    P +V  L     +HVA  +GD  T  V+  G V+S+G G+   LG     DG 
Sbjct: 656 NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-TDGS 714

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   TP++V  L  +N  VV++   +       + ALT  G++Y +G GD  +LG
Sbjct: 715 K-------TPKIVDKLLDIN--VVKVFCGSQF-----SAALTAHGEVYTWGKGDAYRLG 759



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS +G    + WG++ R  LG    P    P P   +L  +  +Q+A G   L A+    
Sbjct: 3988 LSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTADG 4046

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
                +YS G G  G+LG G       P L+E  Q + ++ V V++G  H   +  +G V 
Sbjct: 4047 K---IYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVY 4103

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG G  G LGHGN+     PK+++ L  V+ + +A G + +  ++  G +Y++G G   
Sbjct: 4104 SWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4163

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH   +D Q       L P++V +L+  + +V+ ++  +    +A T  +T+   +++
Sbjct: 4164 RLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4210

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4211 WGDGDYGKLG 4220



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T  G VYS+G+   G+LGHG T     P+ I +L    II  A G+  +  +S  
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSAN 638

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G      V +P LV +LK   VV  A G+  +  L        F
Sbjct: 639 GELYTWGRGNYGRLGHG--NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 696

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+    +LG         P  ++  L +I VV++  G  +  AL        VY+ G 
Sbjct: 697 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGSQFSAALTAHGE---VYTWGK 752

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHGS    ++P++IE  +   ++ + V  G  H   + +D  V  WG   YG +
Sbjct: 753 GDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSV--GTTHILALTEDQFVYGWGRNDYGQI 810

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                   S P +   L+    I +A+G   +F
Sbjct: 811 DPTLGPIISEPTLCPTLSSKTVIGLASGPTQSF 843



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 100/169 (59%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+++ G +Y++G  + G+LGHG  ++   P  + +L+G  ++  A G+G  +T+
Sbjct: 628 GSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTL 687

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+++G   +G+   G  GT    +P++V+ L +I VV+   G+ F+A L+  G
Sbjct: 688 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 745

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            VYT+  G+  RLGH +E +   P  ++ +L +  V  ++ G  ++LAL
Sbjct: 746 EVYTWGKGDAYRLGHGSEEHVRYPK-VIESLRDRKVKDLSVGTTHILAL 793



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G +II  A GA  
Sbjct: 3261 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 3320

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L++  V + + G+
Sbjct: 3321 CLAVTDTGQVYAWGDNDHGQQGNGT--TSVNRKPSLVHDLEDARVNRVSCGS 3370



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 3/161 (1%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G    G+LG G T+    P+ +  L  I +++   G+  +  
Sbjct: 681 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAA 740

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G+VY +GK       +G +  + V  P+++ESL++  V   ++G      L+ +  
Sbjct: 741 LTAHGEVYTWGKGDAYRLGHGSE--EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQF 798

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           VY +   +  ++     P   EP  L  TL +  V+ +A+G
Sbjct: 799 VYGWGRNDYGQIDPTLGPIISEP-TLCPTLSSKTVIGLASG 838



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            Q   V  WG      LG        +P   + L+ +K IH+A G  T F+VS++G +Y+ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G G +  LG      G  N   N+  P+ +  L Q   + V +          H  ALT+
Sbjct: 3070 GEGTNGRLGL-----GDDN---NMCEPKAIPFLSQFVIKKVAVHSGGK-----HALALTQ 3116

Query: 396  SGKLYAFGAGDKGQLG 411
             GK++++G G+ G+LG
Sbjct: 3117 DGKVFSWGEGEDGKLG 3132



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H +A + KG V+++G N  GQLG GTT    RPR + +LQG +I + A G+  T+  
Sbjct: 4299 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAW 4358

Query: 111  SDA 113
            S A
Sbjct: 4359 STA 4361



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   G   S A+T+ G VY++G   + +LGHG+ E    P+ I SL+  ++   + G   
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTH 789

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            + +++   VY +G++ +G+ +  +    +++ P L  +L +  V+  A G
Sbjct: 790 ILALTEDQFVYGWGRNDYGQIDPTL--GPIISEPTLCPTLSSKTVIGLASG 838


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 187/372 (50%), Gaps = 29/372 (7%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
           T  G VY++G    G+LGHG    ++ PR   SL G  I     G+  T  +S  G ++ 
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G   +G+  +G +     ++P+ V+SL  + VV  A G+  TA+++  G +YT+    +
Sbjct: 83  WGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 179 ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAA-GYCYLLALACQPSGMAVYSVGCGLGGK 236
              GH  TE +   P  LL  L    VVQ++A G+       C      VY+ G G  G+
Sbjct: 141 GVAGHGDTEGHQYTP-KLLERLSGKRVVQLSACGF----HTGCLTDAGEVYTWGEGKFGR 195

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           LGHG+  +   PRL+E   LL  +PV ++ G +H+AVV  DG++ T+G G +G LGHG++
Sbjct: 196 LGHGAERNCHSPRLVET--LLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK 253

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
             +  P +V+ L+ V    +  G   +  ++   +VY++G G+   LGH     G G + 
Sbjct: 254 VNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH-----GCGKK- 307

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA---FGAGDKGQLGIE 413
             V TPQLV  L  V ++VV ++      +N HT  L E   + A      G   Q+G  
Sbjct: 308 --VSTPQLVEKL--VGQKVVCVA-----SYNEHTACLVEPHSVNASRRHAPGTMVQIGAG 358

Query: 414 LVNNQTERGNPE 425
            +++  E  N E
Sbjct: 359 YLHDMKELVNDE 370



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%)

Query: 27  WKLVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
           WK V R    LAG+       +    G  H+ AV+SKG ++++G    G+LGHG      
Sbjct: 46  WKYVPRLTHSLAGQVI-----THVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHS 100

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 143
            P+ + SL G+ ++  A G+  T +++  G +Y +G    G A +G  +G +   +P+L+
Sbjct: 101 TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQY--TPKLL 158

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
           E L    VVQ +   F T  L+  G VYT+  G   RLGH  E N   P  L+ TL    
Sbjct: 159 ERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPR-LVETLLGKR 217

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
            VQI+ G       A   +   +Y+ G G  G+LGHG + ++  P L++    + L    
Sbjct: 218 PVQISCGG---FHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQ-- 272

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           +  G  H+  +     V TWG G +G LGHG  +  S P++V+ L   K + VA+ +  T
Sbjct: 273 ITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHT 332

Query: 324 FVVSEDGDV 332
             + E   V
Sbjct: 333 ACLVEPHSV 341



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 29/169 (17%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS  VT+ G +Y+FG    GQLGHG    + +P  ++ L G+ + Q   G   
Sbjct: 220 QISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSH 279

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ ++ + +VY +G    G+  +G    K V++PQLVE L    VV  A  N  TA L  
Sbjct: 280 SVALTSSHEVYTWGNGDHGKLGHGCG--KKVSTPQLVEKLVGQKVVCVASYNEHTACL-- 335

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCY 213
                                  VEPH +  +  + P  +VQI AGY +
Sbjct: 336 -----------------------VEPHSVNASRRHAPGTMVQIGAGYLH 361



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  HS+A+TS   VY++G+   G+LGHG  ++   P+ +  L G +++  A+   
Sbjct: 271 TQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNE 330

Query: 106 RTMLISDAGQVYA 118
            T  + +   V A
Sbjct: 331 HTACLVEPHSVNA 343


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 22/382 (5%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  I G  H+ A + + + +YS+G    G+LGHG + + + P+PI++LQG+RI Q A G 
Sbjct: 84  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 143

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG V+++G++  G+   G+  T+    PQ +++ + + V   A G   TA +
Sbjct: 144 SHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 201

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P  +  ++    +V +A G+ + + ++   S  
Sbjct: 202 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMVLVACGWRHTITVS---SSG 257

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           ++Y+ G    G+LGHG   D   P  +E  +   +  +   +G W H   +  DG++  W
Sbjct: 258 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI---SGGWRHTMALAADGKLYGW 314

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G G+ E    P  V   N+ K + VA G   T  ++E  +V+S+G G S  L
Sbjct: 315 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 374

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH  I D       N+  P+++ +L        Q+  + ++  +A  +      + YA  
Sbjct: 375 GHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAVPMSAKVW--VSPSERYAIV 424

Query: 404 AGDKGQLGIELVNNQTERGNPE 425
             +K   GI    N TE   P+
Sbjct: 425 PDEKAGKGIP-AGNGTETHVPQ 445



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 166/363 (45%), Gaps = 70/363 (19%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S GVV S+G    GQLGHG  E+  RP P                  T+L
Sbjct: 32  AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVP------------------TVL 71

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +           +F +A  GV    +  +                  +  TA    E +
Sbjct: 72  TA-----------AFDDAPGGVASVVICGA------------------DHTTAYSDEELQ 102

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +Y++ WG+  RLGH    +   P P+   L+ + + QIA G  + LA+        V+S 
Sbjct: 103 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 158

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V +DG +  WGWGRYG
Sbjct: 159 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 216

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G+ +   +P+ V ++N  K + VA G   T  VS  G +Y++G  +   LGH    
Sbjct: 217 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           D         L P  + +LK     + QIS      W  HT AL   GKLY +G    GQ
Sbjct: 277 DH--------LVPHKLEALKDTT--ISQISGG----WR-HTMALAADGKLYGWGWNKFGQ 321

Query: 410 LGI 412
           +G+
Sbjct: 322 VGV 324


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 22/382 (5%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  I G  H+ A + + + +YS+G    G+LGHG + + + P+PI++LQG+RI Q A G 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG V+++G++  G+   G+  T+    PQ +++ + + V   A G   TA +
Sbjct: 139 SHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 196

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P  +  ++    +V +A G+ + + ++   S  
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMVLVACGWRHTITVS---SSG 252

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           ++Y+ G    G+LGHG   D   P  +E  +   +  +   +G W H   +  DG++  W
Sbjct: 253 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI---SGGWRHTMALAADGKLYGW 309

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G G+ E    P  V   N+ K + VA G   T  ++E  +V+S+G G S  L
Sbjct: 310 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 369

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH  I D       N+  P+++ +L        Q+  + ++  +A  +      + YA  
Sbjct: 370 GHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAVPMSAKVW--VSPSERYAIV 419

Query: 404 AGDKGQLGIELVNNQTERGNPE 425
             +K   GI    N TE   P+
Sbjct: 420 PDEKAGKGIP-AGNGTETHVPQ 440



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 166/363 (45%), Gaps = 70/363 (19%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S GVV S+G    GQLGHG  E+  RP P                  T+L
Sbjct: 27  AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVP------------------TVL 66

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +           +F +A  GV    +  +                  +  TA    E +
Sbjct: 67  TA-----------AFDDAPGGVASVVICGA------------------DHTTAYSDEELQ 97

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +Y++ WG+  RLGH    +   P P+   L+ + + QIA G  + LA+        V+S 
Sbjct: 98  LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 153

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V +DG +  WGWGRYG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G+ +   +P+ V ++N  K + VA G   T  VS  G +Y++G  +   LGH    
Sbjct: 212 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           D         L P  + +LK     + QIS      W  HT AL   GKLY +G    GQ
Sbjct: 272 DH--------LVPHKLEALKDTT--ISQISGG----WR-HTMALAADGKLYGWGWNKFGQ 316

Query: 410 LGI 412
           +G+
Sbjct: 317 VGV 319


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P  I SL  +R IQ   G      ++  G++YA G 
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V++P L+ES++++ + + A+  G      LS EG VY++  G D 
Sbjct: 3241 GASGR--LGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L    V+ IA G  +    AC  S   +Y+ G G  G+LGH
Sbjct: 3299 KLGHGNRTQCDRPR-VIESLRGKEVIDIACGGAHS---ACVTSSGELYTWGKGRYGRLGH 3354

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P++ +  +   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3355 GDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGC 3414

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP+ V AL+ +    V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3415 KVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGS--------DDHV 3466

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V +L+   ++++ I+ T S+    H  A ++ G++Y +G  D+GQLG
Sbjct: 3467 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDQGEVYTWGDNDEGQLG 3511



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 172/357 (48%), Gaps = 23/357 (6%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G     AVT+ G +Y+ G  +SG+LG G T+    P  + S+Q + I + A  +G 
Sbjct: 3218 QIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGG 3277

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P+++ESL+   V+  A G   +A +
Sbjct: 3278 KHALALSVEGEVYSWGEGEDGKLGHGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACV 3335

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + + P  +   L+   V+ +A G      L C     
Sbjct: 3336 TSSGELYTWGKGRYGRLGHGDSEDQLRPK-MADALKGYRVIDVACGSGDSQTL-CISDDD 3393

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P+ ++    + +    V  G+  +  + + G V TWG
Sbjct: 3394 NVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGV--CKVECGSQFSIALTKSGCVYTWG 3451

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P+ V AL   K I +ATG       S+ G+VY++G  +   LG
Sbjct: 3452 KGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG 3511

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
                 DG  N    +  P++VT+L+          +TN    +AHT A + S  L+A
Sbjct: 3512 -----DGTTN---AIQRPRIVTALQDKK-------ITNVACGSAHTVAWSTSKPLHA 3553



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 174/352 (49%), Gaps = 27/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N   QLG     +   P     L  ++++  A G+    +++  G+VYA G+ +
Sbjct: 2208 VFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+  ++ V  P+ V  L    V + A+  G      L+ +G+V+++  G+D +L
Sbjct: 2268 NGR--LGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2325

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH +  N  +P  LL  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG 
Sbjct: 2326 GHLSRMNCEKPR-LLEALKTKRIRDIACGSSHSAAVT---SSGELYTWGLGEYGRLGHGD 2381

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
             T +  P+L++   L+  + + VA G+  A  +    +G V +WG G +G LG G  E  
Sbjct: 2382 STTQLRPKLVKA--LVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGC 2439

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            SVP  V+ LN    I +  G   +  +++ G V+++G G+   LGH           ++V
Sbjct: 2440 SVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGT--------DSHV 2491

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              PQ+   LK   ++++ +++        H  A+T++G+++A+G  D GQ G
Sbjct: 2492 RKPQVAEGLK--GKKIIHVAVGA-----LHCLAVTDTGQVFAWGDNDHGQQG 2536



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 10/301 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A++ +G VYS+G    G+LGHG   +  RPR I SL+G  +I  A G   +  
Sbjct: 3275 SGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSAC 3334

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++ +G++Y +GK  +G   +G    +L   P++ ++LK   V+  A   G+  T  +S +
Sbjct: 3335 VTSSGELYTWGKGRYGRLGHGDSEDQL--RPKMADALKGYRVIDVACGSGDSQTLCISDD 3392

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   +  L +I V ++  G  + +AL    SG  VY
Sbjct: 3393 DNVWSWGDGDYGKLGRGGSDGCKVPQK-VDALSSIGVCKVECGSQFSIALT--KSG-CVY 3448

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR +   Q   +  + +A G+ H       G V TWG   
Sbjct: 3449 TWGKGDYHRLGHGSDDHVRRPRKVAALQGKKI--ISIATGSLHCVACSDQGEVYTWGDND 3506

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
             G LG G       P++V AL D K  +VA G   T   S    +++    ++  + +N 
Sbjct: 3507 EGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLHAGRLPQTVPMEYNL 3566

Query: 348  I 348
            +
Sbjct: 3567 L 3567



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 29/302 (9%)

Query: 115  QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
            +V+ +G   KD  G    G +G+K+ T P L E L ++ VV  A G+    V++ EG+VY
Sbjct: 2207 KVFVWGLNDKDQLG----GPRGSKIKT-PVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVY 2261

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
                G + RLG  +  N   P  + G L    V ++A       A+A    G  V+S G 
Sbjct: 2262 ACGEGTNGRLGLGSSQNVDIPKQVNG-LSQYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 2319

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  GKLGH SR + + PRL+E  +   ++   +A G+ H+A V   G + TWG G YG L
Sbjct: 2320 GDDGKLGHLSRMNCEKPRLLEALKTKRIRD--IACGSSHSAAVTSSGELYTWGLGEYGRL 2377

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            GHG+   +  PK+V+AL   + I VA G  D  T  ++++G VYS+G G+   LG     
Sbjct: 2378 GHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG--- 2434

Query: 350  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               G+   +V  P  V  L    + V+QI           + ALT++G+++ +G GD  +
Sbjct: 2435 ---GSEGCSV--PHNVERLN--GQGVIQIECGAQF-----SLALTKAGQVWTWGKGDYFR 2482

Query: 410  LG 411
            LG
Sbjct: 2483 LG 2484



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 158/341 (46%), Gaps = 18/341 (5%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRTMLISDA 113
              VT++G VY+ G  ++G+LG G+++    P+ +  L    ++ +   +G    M ++  
Sbjct: 2252 FVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVD 2311

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+V+++G+   G+   G         P+L+E+LK   +   A G+  +A ++  G +YT+
Sbjct: 2312 GKVFSWGEGDDGK--LGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH      + P  L+  L    V+Q+A G      L     GM VYS G G 
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPK-LVKALVGKRVIQVACGSRDAQTLTLTDEGM-VYSWGDGD 2427

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             GKLG G       P  +E+   LN Q V+ +  GA  +  + + G+V TWG G Y  LG
Sbjct: 2428 FGKLGRGGSEGCSVPHNVER---LNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG 2484

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            HG +     P+V + L   K IHVA G      V++ G V+++G  +     H    DG 
Sbjct: 2485 HGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDND-----HGQQGDGS 2539

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
               +     P LV  L+ V    V    ++S  W     A+
Sbjct: 2540 TTVNKK---PALVQGLEGVRITRVACGSSHSTAWATTDTAI 2577



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 10/272 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR + +L+  RI   A G+  +  
Sbjct: 2300 SGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAA 2359

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            ++ +G++Y +G   +G   +G   T+L   P+LV++L    V+Q A G  +  T  L+ E
Sbjct: 2360 VTSSGELYTWGLGEYGRLGHGDSTTQL--RPKLVKALVGKRVIQVACGSRDAQTLTLTDE 2417

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G VY++  G+  +LG         PH  +  L    V+QI  G  + LAL        V+
Sbjct: 2418 GMVYSWGDGDFGKLGRGGSEGCSVPHN-VERLNGQGVIQIECGAQFSLALT---KAGQVW 2473

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+ +  + P++ E  +   +  + VA GA H   V   G+V  WG   
Sbjct: 2474 TWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKI--IHVAVGALHCLAVTDTGQVFAWGDND 2531

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            +G  G G+      P +VQ L  V+   VA G
Sbjct: 2532 HGQQGDGSTTVNKKPALVQGLEGVRITRVACG 2563



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 122/223 (54%), Gaps = 10/223 (4%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS AVTS G +Y++G    G+LGHG +  + RP+ +++L G R+IQ A G+   +T+
Sbjct: 2353 GSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTL 2412

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G VY++G   FG  + G  G++  + P  VE L    V+Q   G  F+  L++ G
Sbjct: 2413 TLTDEGMVYSWGDGDFG--KLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAG 2470

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +V+T+  G+  RLGH T+ +  +P    G L+   ++ +A G  + LA+        V++
Sbjct: 2471 QVWTWGKGDYFRLGHGTDSHVRKPQVAEG-LKGKKIIHVAVGALHCLAVT---DTGQVFA 2526

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
             G    G+ G GS T  K P L++  + + +    VA G+ H+
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGLEGVRI--TRVACGSSHS 2567



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 121/249 (48%), Gaps = 19/249 (7%)

Query: 165  SREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            SRE +   F WG ND         + ++   L   L ++ VV  A G   L  +  +   
Sbjct: 2201 SREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGK- 2259

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              VY+ G G  G+LG GS  +   P+ +       ++ V V +G  HA  +  DG+V +W
Sbjct: 2260 --VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317

Query: 284  GWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            G G  G LGH     CE  P++++AL   +   +A G   +  V+  G++Y++G GE   
Sbjct: 2318 GEGDDGKLGHLSRMNCEK-PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
            LGH              L P+LV +L  V +RV+Q++  +    +A T  LT+ G +Y++
Sbjct: 2377 LGHGD--------STTQLRPKLVKAL--VGKRVIQVACGSR---DAQTLTLTDEGMVYSW 2423

Query: 403  GAGDKGQLG 411
            G GD G+LG
Sbjct: 2424 GDGDFGKLG 2432



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 26/258 (10%)

Query: 164  LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            ++R    +T SWG    +   GH+        E   V+    + +L ++  +QI  G   
Sbjct: 3166 MNRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQT 3225

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            L A+    +   +Y+ G G  G+LG G       P L+E  Q ++++ V V +G  HA  
Sbjct: 3226 LFAVT---ADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALA 3282

Query: 274  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
            +  +G V +WG G  G LGHGN      P+V+++L   + I +A G   +  V+  G++Y
Sbjct: 3283 LSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELY 3342

Query: 334  SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            ++G G    LGH    D         L P++  +LK    RV+ ++  +    ++ T  +
Sbjct: 3343 TWGKGRYGRLGHGDSEDQ--------LRPKMADALK--GYRVIDVACGSG---DSQTLCI 3389

Query: 394  TESGKLYAFGAGDKGQLG 411
            ++   ++++G GD G+LG
Sbjct: 3390 SDDDNVWSWGDGDYGKLG 3407



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHGT     +P+    L+G +II  A GA  
Sbjct: 2455 QIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALH 2514

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQV+A+G +  G+   G   T +   P LV+ L+ + + + A G+
Sbjct: 2515 CLAVTDTGQVFAWGDNDHGQQGDG--STTVNKKPALVQGLEGVRITRVACGS 2564



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 9/106 (8%)

Query: 80  TEEEWRPRPIRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKL 136
           ++++  P+ +  L+  + +  A G+  G+T+ ++D G +++FG   +G+    G  G KL
Sbjct: 2   SDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKL 61

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY---TFSWGNDA 179
              P+LV+ L+    V A  GN F+ +L++ G VY   TF+W + A
Sbjct: 62  ---PKLVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSA 104



 Score = 42.4 bits (98), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           G ++AVT  G+++SFG+   G+LG G ++    P+ +  LQG   + A  G   +++++ 
Sbjct: 29  GQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCGNQFSVILTK 88

Query: 113 AGQVY 117
            G VY
Sbjct: 89  TGTVY 93



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 5/52 (9%)

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           LTP+LV+ LK+  ++ V I+L ++   +  T A+T++G L++FG GD G+LG
Sbjct: 6   LTPKLVSGLKE--QKFVHIALGSN---DGQTLAVTDTGLLFSFGNGDYGKLG 52


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 176/363 (48%), Gaps = 25/363 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS+A+ S G+V S+G    GQLGHG  +E   P+ I +L    I     GA  T+ +
Sbjct: 21  GSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAV 80

Query: 111 SDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + GQVY++G   FG   +G      V  P+ +E      V + A G+  T V++ EG 
Sbjct: 81  APSRGQVYSWGWGDFGRLGHGDCNDVFV--PRPIEFFSGRPVHRVACGDTHTLVVAGEGE 138

Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           ++TF    + +LG  HT  ND     L+  L+   V  +A G  +  +LA   SG  V+S
Sbjct: 139 LFTFGRNQNGQLGLGHT--NDCLSPQLVVALQGERVRSVACGSEH--SLAATESGT-VFS 193

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G   D   P  +    L  ++ V    G  H+AVV +DGRV T+GW +Y
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRV--VGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKY 251

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+    +VP  V AL   +   VA G   T      G++Y +G  +   LG    
Sbjct: 252 GQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDS 311

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
           +D    R + VL    +   +        +SL    +   HT A+TE G++Y++G G  G
Sbjct: 312 SD----RPSPVLVGGALAGQR--------VSLVTCGW--RHTVAVTEGGRVYSWGRGVNG 357

Query: 409 QLG 411
           QLG
Sbjct: 358 QLG 360



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 12/305 (3%)

Query: 49  IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + G  ++IAV  S+G VYS+G    G+LGHG   + + PRPI    G  + + A G   T
Sbjct: 71  VCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHT 130

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           ++++  G+++ FG++  G  + G+  T    SPQLV +L+   V   A G+  +   +  
Sbjct: 131 LVVAGEGELFTFGRNQNG--QLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES 188

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G V+++ WG    LG     +   P  ++G LE I +V    G+ +   ++       V+
Sbjct: 189 GTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHSAVVS---EDGRVF 244

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 286
           + G    G+LGHG  TD   P  +   +   +  V   AG W H       G +  WGW 
Sbjct: 245 TFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSV---AGGWRHTMAADSSGNLYGWGWN 301

Query: 287 RYGCLGHGNEECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           ++G LG G+      P +V  AL   +   V  G   T  V+E G VYS+G G +  LGH
Sbjct: 302 KFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361

Query: 346 NAIAD 350
            A  D
Sbjct: 362 GAEQD 366



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 29/330 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           +   + G+  ++ I   G V ++G+   G+  +G     L  +P+ + +L +  +     
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL--APKAISTLTDAGIESVVC 72

Query: 157 GNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYL 214
           G  +T AV    G+VY++ WG+  RLGH  + NDV  P P+       PV ++A G  + 
Sbjct: 73  GAEYTIAVAPSRGQVYSWGWGDFGRLGH-GDCNDVFVPRPIE-FFSGRPVHRVACGDTHT 130

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           L +A +     +++ G    G+LG G   D   P+L+   Q   ++ V  A G+ H+   
Sbjct: 131 LVVAGEGE---LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV--ACGSEHSLAA 185

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            + G V +WGWGRYG LG G  +   +P  V  L  ++ +    G   + VVSEDG V++
Sbjct: 186 TESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFT 245

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           FG  +   LGH          H +   P  V +L+    R+  ++      W  HT A  
Sbjct: 246 FGWSKYGQLGH--------GDHTDRTVPCQVAALRHT--RISSVAGG----WR-HTMAAD 290

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
            SG LY +G    GQLG+    + ++R +P
Sbjct: 291 SSGNLYGWGWNKFGQLGL---GDSSDRPSP 317


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 11/320 (3%)

Query: 46  SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+ A +  +  VYS+G    G+LGHG + + + P+P+++LQGI+I Q A G 
Sbjct: 79  TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGD 138

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG+V ++G++  G+   G     L+  PQ ++S + + V   A G   TA +
Sbjct: 139 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQSFEGVCVKMIAAGAEHTAAV 196

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P  +  ++E   +V IA G+ + + ++   S  
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRNDRLVPEKV-SSVEGEKMVLIACGWRHTITVS---SSG 252

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           ++Y+ G    G+LGHG   D   P  +E  +  ++  +   +G W H   +  DG++  W
Sbjct: 253 SLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQI---SGGWRHTMALTSDGKLYGW 309

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G G+ +    P  V+   D K   VA G   T   +E  +V+S+G G S  L
Sbjct: 310 GWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQL 369

Query: 344 GHNAIADGQGNRHANVLTPQ 363
           GH  I D       + L+P 
Sbjct: 370 GHGEIVDRNKPVMIDALSPD 389



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 161/365 (44%), Gaps = 76/365 (20%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ +  V+ S+G    GQLGHG  E+   P  +           AA  G T +
Sbjct: 29  AGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD-------AAAPGITSV 81

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I  A    A+ +D                                            E +
Sbjct: 82  ICGADHTTAYSED--------------------------------------------EQQ 97

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA--VY 227
           VY++ WG+  RLGH    +   P P+   L+ I + QIA G  + LA+      MA  V 
Sbjct: 98  VYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGIKIKQIACGDSHCLAVT-----MAGEVQ 151

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V +DG +  WGWGR
Sbjct: 152 SWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVK--MIAAGAEHTAAVTEDGDLYGWGWGR 209

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LG G+     VP+ V ++   K + +A G   T  VS  G +Y++G  +   LGH  
Sbjct: 210 YGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGD 269

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             D         L P  + +LK  +  + QIS      W  HT ALT  GKLY +G    
Sbjct: 270 FEDH--------LVPHKLEALK--DSSISQISGG----WR-HTMALTSDGKLYGWGWNKF 314

Query: 408 GQLGI 412
           GQ+G+
Sbjct: 315 GQVGV 319


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 175/364 (48%), Gaps = 25/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  VV S+G    GQLGHG T++   P  + +L   +I+    GA  T+ 
Sbjct: 22  AGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLA 81

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  +VY++G   FG   +G      +  PQ + +L+ + + Q A G+     ++ EG
Sbjct: 82  YSESKVEVYSWGWGDFGRLGHGNSSDLFI--PQPIRALQGLRIKQIACGDSHCLAVTMEG 139

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +  T + +P+  +AAG  + +A+        +Y 
Sbjct: 140 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 195

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P   E+  +   + V+VA G  H   V   G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRCIP---EKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKY 252

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ +   VP  +QA +D     V+ G   T  ++  G +Y +G  +    G   +
Sbjct: 253 GQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNK---FGQVGV 309

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D       NV     V      +++V QIS      W  HT A+TE   +Y++G G  G
Sbjct: 310 GD-------NVDRCSPVQVKFPHDQKVAQISCG----WR-HTIAVTEKDNVYSWGRGTNG 357

Query: 409 QLGI 412
           QLGI
Sbjct: 358 QLGI 361



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 152/298 (51%), Gaps = 12/298 (4%)

Query: 49  IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + G  H++A + SK  VYS+G    G+LGHG + + + P+PIR+LQG+RI Q A G    
Sbjct: 73  VCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHC 132

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + ++  G+V ++G++  G+   G     LV  PQ +++ + + +   A G   +  ++  
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQTFQGVPIKMVAAGAEHSVAITEN 190

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G +Y + WG    LG     +   P  +  +++   +V +A G+ + ++++   S   +Y
Sbjct: 191 GELYGWGWGRYGNLGLGDRNDRCIPEKV--SVDCDKMVLVACGWRHTISVS---SSGELY 245

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 286
           + G    G+LGHG   D   P  ++ F   + + +   +G W H   +   G++  WGW 
Sbjct: 246 TYGWSKYGQLGHGDCKDHLVPHKLQAF---SDKLICQVSGGWRHTMALTTGGQLYGWGWN 302

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           ++G +G G+      P  V+  +D K   ++ G   T  V+E  +VYS+G G +  LG
Sbjct: 303 KFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLG 360



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 11/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG GTTE+   P+ I++ QG+ I   AAGA  
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEH 183

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I++ G++Y +G   +G    G +  + +     V+  K + V   A G   T  +S 
Sbjct: 184 SVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLV---ACGWRHTISVSS 240

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L    + + + Q++ G+ + +AL    +G  +
Sbjct: 241 SGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKL-ICQVSGGWRHTMALT---TGGQL 296

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +  + Q V   +  W H   V +   V +WG 
Sbjct: 297 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGR 353

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G+    + PK+++AL+
Sbjct: 354 GTNGQLGIGDTIDWNYPKIIEALS 377



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 26/229 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V+ I+AG  + +AL    SG  V S G G  G+LGHG   D   P    Q   L+ Q +V
Sbjct: 17  VLLISAGGSHSVALI---SGNVVCSWGRGEDGQLGHGDTDDRLLP---TQLSALDAQQIV 70

Query: 264 -VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            V  GA H     +    V +WGWG +G LGHGN     +P+ ++AL  ++   +A GD 
Sbjct: 71  SVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDS 130

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
               V+ +G+V S+G  ++  LG     D         L PQ + + + V  ++V     
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDS--------LVPQKIQTFQGVPIKMVAAGA- 181

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
                  H+ A+TE+G+LY +G G  G LG+    ++ +R  PE+V +D
Sbjct: 182 ------EHSVAITENGELYGWGWGRYGNLGL---GDRNDRCIPEKVSVD 221


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 174/357 (48%), Gaps = 33/357 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  SL  +R IQ A G      ++  G+VYA G 
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGY 3953

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G  G   V  P L+ES++++F+ + A+  G      LS EG VY++  G+D 
Sbjct: 3954 GALGR--LGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011

Query: 180  RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            +LGH     +  P  +E   LLGT     +V IA G  +  A++   S   +Y+ G G  
Sbjct: 4012 KLGHGNRITYDRPKLIEA--LLGT----EIVDIACGGHHSAAIS---SAGWLYTWGKGRY 4062

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            G+LGHG   D+  P ++   Q   +  V   +G      V  D  V +WG G YG LG G
Sbjct: 4063 GRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4122

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +   VP  +++L  +  + V  G   +  ++  G VY++G G+   LGH         
Sbjct: 4123 GSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT------- 4175

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  P+ V++L+   +++V I+ T S+    H  A ++ G++Y +G  D+GQLG
Sbjct: 4176 -DDHVRRPRKVSALQ--GKKIVSIA-TGSL----HCVACSDKGEVYTWGDNDEGQLG 4224



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 166/352 (47%), Gaps = 23/352 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT+ G VY+ G  + G+LG G  +    P  + S+Q + I + A  +G    + +S  
Sbjct: 3940 FAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3999

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G VY++G+   G+  +G + T     P+L+E+L    +V  A G   +A +S  G +YT+
Sbjct: 4000 GHVYSWGEGDDGKLGHGNRIT--YDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTW 4057

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + ++P  ++  L+   V+ +A G      L C      V+S G G 
Sbjct: 4058 GKGRYGRLGHGDSDDQLKP-TVVTALQGYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGD 4115

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  V V  G+  +  + + G V TWG G Y  LGH
Sbjct: 4116 YGKLGRGGSDGCKVPMKIE--SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4173

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G ++    P+ V AL   K + +ATG       S+ G+VY++G  +   L       G G
Sbjct: 4174 GTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQL-------GDG 4226

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
              HA   +P+LV +L+  N       +T     +AHT A + +   ++  A 
Sbjct: 4227 TTHAQQ-SPRLVHALQGKN-------ITRVACGSAHTLAWSTTKATHSLPAA 4270



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 154/320 (48%), Gaps = 29/320 (9%)

Query: 97   IIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            ++Q    A R   +     VY +G   KD  G    G++G+K +  P   E L  +  + 
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG----GLKGSK-IKLPVHSEVLSKLKPIH 2959

Query: 154  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
             A G+    V+S+EG++Y    G + RLG     N  EP P +  L    + ++A     
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKP-IPFLSQYIIKKVAVHSGG 3018

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
              ALA    G  V+S G G  GKLGHG+R     PRLIE  +   ++   +A G+ H+A 
Sbjct: 3019 KHALALTQDG-KVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRD--IACGSGHSAA 3075

Query: 274  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGD 331
            +  +G + TWG G YG LGHG+      PK+V AL   + I VA G  D  T  ++EDG 
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135

Query: 332  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
            VYS+G G+   LG    +DG         +P  V  L  +   VVQ+           + 
Sbjct: 3136 VYSWGDGDFGKLGRGG-SDG-------CYSPLPVDRLNGLG--VVQVECGAQF-----SL 3180

Query: 392  ALTESGKLYAFGAGDKGQLG 411
            ALT+ G+++ +G GD  +LG
Sbjct: 3181 ALTKYGEVWTWGKGDYFRLG 3200



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 164/341 (48%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   ++ V S+ G +Y+ G  ++G+LG G       P+PI  L    I+ +   +G  
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGK 3019

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + +  +  P+L+E+LK+  +   A G+  +A ++
Sbjct: 3020 HALALTQDGKVFSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIA 3077

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+  L    V+Q+A G      +A    G +
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTHLKPK-LVDALVGQRVIQVACGSRDAQTMALTEDG-S 3135

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P  +++   L +  V V  GA  +  + + G V TWG 
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3193

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY++G  +      
Sbjct: 3194 GDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3250

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                 G G+   N   P LV +L+      V    ++SI W
Sbjct: 3251 ----QGNGSTMVN-RKPSLVHNLEDAKVNRVACGSSHSIAW 3286



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 18/327 (5%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +PR I +L+  RI   A G+G +  
Sbjct: 3016 SGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAA 3075

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+  G++Y +G   +G   +G   T L   P+LV++L    V+Q A G  +  T  L+ +
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTED 3133

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G VY++  G+  +LG         P P +  L  + VVQ+  G  + LAL        V+
Sbjct: 3134 GSVYSWGDGDFGKLGRGGSDGCYSPLP-VDRLNGLGVVQVECGAQFSLALT---KYGEVW 3189

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P L+E  +    + V VA GA H   V   G+V  WG   
Sbjct: 3190 TWGKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDND 3247

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT--FVVSE-----DGDVYSFGCGES 340
            +G  G+G+      P +V  L D K   VA G   +  +V+++     + +  +F   + 
Sbjct: 3248 HGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQPTLGNQEPVTFPTAKD 3307

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTS 367
              LG   +   Q     NV+TP   +S
Sbjct: 3308 P-LGQATLGFTQDKTETNVVTPPTKSS 3333



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 121/219 (55%), Gaps = 10/219 (4%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLIS 111
            HS A++S G +Y++G    G+LGHG ++++ +P  + +LQG ++I  A G+G  +T+ ++
Sbjct: 4044 HSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVT 4103

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
            D   V+++G   +G+   G  G+     P  +ESL  + VV+   G+ F+  L+R G VY
Sbjct: 4104 DDDNVWSWGDGDYGKLGRG--GSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVY 4161

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            T+  G+  RLGH T+ +   P   +  L+   +V IA G  +   +AC   G  VY+ G 
Sbjct: 4162 TWGKGDYHRLGHGTDDHVRRPRK-VSALQGKKIVSIATGSLH--CVACSDKG-EVYTWGD 4217

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
               G+LG G+   ++ PRL+   Q  N+    VA G+ H
Sbjct: 4218 NDEGQLGDGTTHAQQSPRLVHALQGKNI--TRVACGSAH 4254



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 157/360 (43%), Gaps = 37/360 (10%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I +L G  I+  A G   +  
Sbjct: 3988 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAA 4047

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            IS AG +Y +GK  +G   +G    +L   P +V +L+   V+  A   G+  T  ++ +
Sbjct: 4048 ISSAGWLYTWGKGRYGRLGHGDSDDQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDD 4105

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4106 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVVKVECGSQFSVALT--RSG-AVY 4161

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR +   Q    + V +A G+ H       G V TWG   
Sbjct: 4162 TWGKGDYHRLGHGTDDHVRRPRKVSALQ--GKKIVSIATGSLHCVACSDKGEVYTWGDND 4219

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA------ 341
             G LG G    +  P++V AL       VA G   T   S     +S             
Sbjct: 4220 EGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHSLPAATPMEYDLVK 4279

Query: 342  ----SLGHN----------------AIADGQGNRHANVLTPQLVTSLKQVNER-VVQISL 380
                S  HN                A+    GN   N L P LV ++K+   R VVQ ++
Sbjct: 4280 DLPFSALHNRLVLLHHFAELLCPTLAMFPTTGNVALNKLAPMLVYTIKEATFRKVVQATM 4339



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 42/299 (14%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V A+G   FG            + P   +++  I V Q         +LS  G+VY   
Sbjct: 434 EVLAWGNVHFGSG----------SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMY 483

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           +G++ +           P  + G  ++  VVQIA+       LA    G+ VYS G G G
Sbjct: 484 YGSETQY----------PQSVYGFADD--VVQIASHPDGKHYLALTTKGI-VYSWGNGDG 530

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LGHG       P++IE   L +     +A G+ ++A +   G + TWG G YG LGHG
Sbjct: 531 GRLGHGDSFSCDEPQVIEV--LSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHG 588

Query: 295 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             +  S+P VV ALN     HVA  +GD  T  V+  G V+S+G G+   LG    +DG 
Sbjct: 589 ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGG-SDGS 647

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    P++V  L  +++ VV++           + ALT  G++Y +G GD  +LG
Sbjct: 648 K-------LPKIVDKL--LDQNVVKVFCGGQF-----SAALTAHGEVYTWGKGDHYRLG 692



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS +G    + WG++ R  LG         P P   +L  +  +Q+A G   L A+    
Sbjct: 3888 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPC-ESLSALRPIQLAGGEQTLFAVT--- 3943

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3944 ADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVY 4003

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG G  G LGHGN      PK+++AL   + + +A G + +  +S  G +Y++G G   
Sbjct: 4004 SWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYG 4063

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH   +D Q       L P +VT+L+    +V+ ++  +    +A T  +T+   +++
Sbjct: 4064 RLGHGD-SDDQ-------LKPTVVTALQ--GYKVIDVACGSG---DAQTLCVTDDDNVWS 4110

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4111 WGDGDYGKLG 4120



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 19/251 (7%)

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           L+ +G VY++  G+  RLGH    +  EP  ++  L +  V  IA G  Y  A++   S 
Sbjct: 516 LTTKGIVYSWGNGDGGRLGHGDSFSCDEPQ-VIEVLSDRTVTYIACGSTYSAAIS---ST 571

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             + + G G  G+LGHG   D   P ++       +  V   +G      V   G V +W
Sbjct: 572 GELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSW 631

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G YG LG G  +   +PK+V  L D   + V  G   +  ++  G+VY++G G+   L
Sbjct: 632 GDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRL 691

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH       GN   +V  P+LV  L+  N++V  +S+      N H  A+TE   +Y +G
Sbjct: 692 GH-------GNEE-HVRFPKLVEGLR--NKKVRDLSVG-----NLHILAITEDQLVYGWG 736

Query: 404 AGDKGQLGIEL 414
             D  Q+   L
Sbjct: 737 RNDACQIDPSL 747



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 19/253 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T+KG+VYS+G+   G+LGHG +     P+ I  L    +   A G+  +  IS  
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST 571

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++  +G+ S+G   +G+     ++ P +V +L    V   A G+  +  L        F
Sbjct: 572 GELLTWGRGSYGRLGHGICDD--ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVF 629

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+    +LG         P  ++  L +  VV++  G  +  AL        VY+ G 
Sbjct: 630 SWGDGDYGKLGRGGSDGSKLPK-IVDKLLDQNVVKVFCGGQFSAALTAHGE---VYTWGK 685

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHG+    + P+L+E  +  N +   ++ G  H   + +D  V  +GWGR    
Sbjct: 686 GDHYRLGHGNEEHVRFPKLVEGLR--NKKVRDLSVGNLHILAITEDQLV--YGWGR---- 737

Query: 292 GHGNEECESVPKV 304
              N+ C+  P +
Sbjct: 738 ---NDACQIDPSL 747



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           E    R  +    G  +S A++S G + ++G  S G+LGHG  ++   P  + +L G  +
Sbjct: 548 EVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTV 607

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
              A G+G  +T+ ++++G V+++G   +G+    G  G+KL   P++V+ L +  VV+ 
Sbjct: 608 THVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKL---PKIVDKLLDQNVVKV 664

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
             G  F+A L+  G VYT+  G+  RLGH  E +   P  L+  L N  V  ++ G  ++
Sbjct: 665 FCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPK-LVEGLRNKKVRDLSVGNLHI 723

Query: 215 LAL 217
           LA+
Sbjct: 724 LAI 726



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      RP  +  L+G +++  A GA  
Sbjct: 3171 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALH 3230

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV +L++  V + A G+
Sbjct: 3231 CLAVTDAGQVYAWGDNDHGQQGNG--STMVNRKPSLVHNLEDAKVNRVACGS 3280



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G    G+LG G ++    P+ +  L    +++   G   +  
Sbjct: 614 SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAA 673

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G+VY +GK       +G +  + V  P+LVE L+N  V   ++GN     ++ +  
Sbjct: 674 LTAHGEVYTWGKGDHYRLGHGNE--EHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQL 731

Query: 170 VYTFSWG-NDA 179
           VY   WG NDA
Sbjct: 732 VY--GWGRNDA 740



 Score = 38.1 bits (87), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   G   S A+T+ G VY++G     +LGHG  E    P+ +  L+  ++   + G   
Sbjct: 663 KVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLH 722

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
            + I++   VY +G++   + +  +    +V+ P L  +L    V+
Sbjct: 723 ILAITEDQLVYGWGRNDACQIDPSLGA--VVSEPTLCPTLSGKSVI 766


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 29/343 (8%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-----EEWRPRPIRSLQGI- 95
           R+   +  AG   S  +T +G VY  G NS+GQL   T +      +     I  ++G+ 
Sbjct: 72  RKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLP 131

Query: 96  ---RIIQAAA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
              +++Q +   GA   ++++ AGQVY+ G ++ G+   G+  TK+  S  LVESLK++ 
Sbjct: 132 PDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQ--LGLGSTKMSPSLLLVESLKHVR 189

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA- 209
           V+ A+     + V+S +G  ++F   +  +LG  T PN + PH +   L +  +V++AA 
Sbjct: 190 VLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV--ELPSPHLVRLAAC 247

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  + + L     GM V+S G  L G+LG GSR+    P LI   Q       ++A G  
Sbjct: 248 GQYHTIFLT--EEGM-VFSCGKNLNGQLGLGSRSSTNVPTLIAALQ--ERPASMIACGYS 302

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H  VV +DG++ T+G+   G LG G+ +  S P  V+ L +VK + ++ G + T V+SE 
Sbjct: 303 HTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSES 362

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
           G+++SFGC     LG   + D       + L P LV S+ + N
Sbjct: 363 GELWSFGCNCHGQLG---LGDS-----TDRLVPVLVPSMTKKN 397



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 8/287 (2%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           C+        G  H + VTS G VYS G N+ GQLG G+T+       + SL+ +R++ A
Sbjct: 134 CKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSA 193

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           +     ++++S  G  ++FG +  G+   G +  +L+  P  VE      V  AA G + 
Sbjct: 194 SCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLL--PHRVELPSPHLVRLAACGQYH 251

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+ EG V++     + +LG  +  +   P  L+  L+  P   IA GY +   +   
Sbjct: 252 TIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVP-TLIAALQERPASMIACGYSHTCVVL-- 308

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                +++ G    G+LG G       P  +E   L N++ V ++ G     V+ + G +
Sbjct: 309 -EDGKLFTFGYNHQGQLGLGHTDSVSSPMQVE--TLRNVKVVKISCGTHFTCVLSESGEL 365

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            ++G   +G LG G+     VP +V ++       +A G +    +S
Sbjct: 366 WSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G    G+LGH +  ++    L++  +   +  V VAAG+  +  + ++G+V   G 
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRI--VKVAAGSETSYFLTEEGKVYCCGL 99

Query: 286 GRYGCL------GHGN--EECESVPKVVQALN-DVKAIHVA--TGDYTTFVVSEDGDVYS 334
              G L      G  N  +E  S  ++++ L  D K + V+   G     VV+  G VYS
Sbjct: 100 NSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYS 159

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFA 392
            GC     LG  +            ++P L  V SLK V  RV+  S +       H+  
Sbjct: 160 CGCNNHGQLGLGSTK----------MSPSLLLVESLKHV--RVLSASCSYH-----HSVV 202

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           ++  G  ++FG  D GQLGI    NQ     P RV++
Sbjct: 203 VSSDGSAFSFGLNDCGQLGIGTRPNQLL---PHRVEL 236



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           D  V   G  R G LGH     +    +VQ+L   + + VA G  T++ ++E+G VY  G
Sbjct: 39  DCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG 98

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
              +  L       G  NR     +   +      + +VVQ+S  N      H   +T +
Sbjct: 99  LNSTGQLARET-HQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGA---EHVLVVTSA 154

Query: 397 GKLYAFGAGDKGQLGI 412
           G++Y+ G  + GQLG+
Sbjct: 155 GQVYSCGCNNHGQLGL 170


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 175/354 (49%), Gaps = 20/354 (5%)

Query: 39   ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---I 95
            A C  +  Q + G   S  + S G V + G    G+LG G +++ + P  I + QG    
Sbjct: 3707 APCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVT 3766

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +++ +    G +M +++ G+V+++G   FG+  +G    +    P+ +E+L+   VVQ A
Sbjct: 3767 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQIEALQGEDVVQLA 3824

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +AV++ +G+++TF  G   RLG  +  N ++P   +  LE   V Q++ G  + L
Sbjct: 3825 CGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPE-RVAALEGYHVGQVSCGLNHTL 3883

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L+    GMAV++ G G  GKLG GS T + +P+ +EQ  L N     V  GA  + V+ 
Sbjct: 3884 VLSLD--GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVLA 3939

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             DG V T+G  R   L     +  S P+VV +L  +    +A G      +S  GD+Y++
Sbjct: 3940 TDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAW 3999

Query: 336  GCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNA 388
            GC     LG           H N++  P L+T+L+  N + +     +S  W A
Sbjct: 4000 GCNSEGQLGLG---------HCNLVKEPTLITALQGKNIKQISAGRCHSSAWTA 4044



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 170/374 (45%), Gaps = 32/374 (8%)

Query: 41  CRRENSQAIAGPGHS-IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 99
           C   +S   A PG    AVT    VY +GSNSS QL  GT E+   P+  +     + I+
Sbjct: 320 CLCSSSADTACPGTDGDAVT----VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIE 375

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-N 158
           A  G   T  +S  G V A GK S+G    G    + +    ++E  +NI  V ++ G +
Sbjct: 376 A--GQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  ++ +G V+++  G   +LGH        P  + G L +  VV  +AGY +  A+ 
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVT 493

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              +   +Y+ G G  G+LGH        P L++    +      VA G+ H   V QDG
Sbjct: 494 ---NDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG----QVACGSSHTIAVAQDG 546

Query: 279 RVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           R   ++G G  G LGHG+      PKV++AL+      V  G  ++  ++  G V+++GC
Sbjct: 547 RTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC 606

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G            G G+     L P+ V  L     +++ IS  +S     H  AL+   
Sbjct: 607 GSCL---------GCGSSETTSLRPRFVEDLSIT--KIIDISCGDS-----HCLALSHEN 650

Query: 398 KLYAFGAGDKGQLG 411
           ++YA+G    GQ G
Sbjct: 651 EVYAWGNNTMGQCG 664



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 180/354 (50%), Gaps = 32/354 (9%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-----PIRSLQGIRII 98
           ++Q I AG   + +V++ G V + G  S G+LG G +  +  P+     P R+++  ++ 
Sbjct: 370 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIK--KVF 427

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+ I+  G+V+++G   +G+  +G   T+    P++V+  L +  VV A+ G
Sbjct: 428 SSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIVQGPLFSKIVVSASAG 485

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLA 216
              +A ++ +G +YT+  G+  RLGH    +D +       +++I  V Q+A G  + +A
Sbjct: 486 YRHSAAVTNDGELYTWGEGDFGRLGH----SDSQSRNTPTLVKDISGVGQVACGSSHTIA 541

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           +A    G  ++S G G  GKLGHG       P++IE      ++ V   AG+  +  +  
Sbjct: 542 VA--QDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTS 597

Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            G+V  WG G   CLG G+ E  S+ P+ V+ L+  K I ++ GD     +S + +VY++
Sbjct: 598 AGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAW 655

Query: 336 GCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           G        +N +   GQG+    +  P+ V  L+ V+ + +    ++S+ W A
Sbjct: 656 G--------NNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTA 701



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 10/239 (4%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G  HS  VT+ G +++FGS  SG+LG  +T  + +P  + +L+G  + Q + G   
Sbjct: 3822 QLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNH 3881

Query: 107  TMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+++S D   V+AFG   +G+   G    K    PQ VE L N  + +   G  F+ VL+
Sbjct: 3882 TLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYY--PQKVEQLCNKGMKKVCCGAQFSVVLA 3939

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G VYTF       L      N   P  ++ +LE + +  IA G  ++LAL+   S   
Sbjct: 3940 TDGHVYTFGQERLIGLPDSMLKNRSNPQ-VVPSLEGLFIEDIAVGCEHVLALS---STGD 3995

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---AGAWHAAVVGQDGRVC 281
            +Y+ GC   G+LG G     K P LI   Q  N++ +      + AW A    ++  +C
Sbjct: 3996 IYAWGCNSEGQLGLGHCNLVKEPTLITALQGKNIKQISAGRCHSSAWTAPSTSKNSALC 4054



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 283
            AV +VG G  G+LG G+  D   P +I  FQ   +  +V + G+  H+  + + G V +W
Sbjct: 3731 AVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSW 3790

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G G +G LGHGN E +  PK ++AL     + +A G   + VV+ DG +++FG GES  L
Sbjct: 3791 GDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRL 3850

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAF 402
            G  +         +N + P+ V +L+  +   V   L        HT  L+  G  ++AF
Sbjct: 3851 GQRST--------SNKMQPERVAALEGYHVGQVSCGLN-------HTLVLSLDGMAVWAF 3895

Query: 403  GAGDKGQLGIELVNNQTERGNPERVD 428
            G GD G+LG     + T +  P++V+
Sbjct: 3896 GDGDYGKLG---AGSSTAKYYPQKVE 3918



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 16/183 (8%)

Query: 47  QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H+IAV   G  ++SFG   +G+LGHG T   +RP+ I +L G  I +  AG+ 
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 590

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 163
            ++ ++ AGQV+A+G  S         G+   TS  P+ VE L    ++  + G+     
Sbjct: 591 SSLALTSAGQVFAWGCGSCLGC-----GSSETTSLRPRFVEDLSITKIIDISCGDSHCLA 645

Query: 164 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           LS E  VY  +WGN+  +G     HT      P  +LG LE + + QI AG  + LA   
Sbjct: 646 LSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-LEGVSIQQITAGTSHSLAWTA 701

Query: 220 QPS 222
            P+
Sbjct: 702 VPT 704



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 155/357 (43%), Gaps = 32/357 (8%)

Query: 61   KGVVYSFGSNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
            K  VY +G+   GQL G GT        P  S    +  Q   G   + LI   G V A 
Sbjct: 3680 KSDVYLWGNGRYGQLAGTGTNLTLPTLAPCLS----QTQQVVCGQNCSFLIQSNGAVMAV 3735

Query: 120  GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWG 176
            G+  +G    G      V  P ++ + +   V Q       +  +  L+  G V+++  G
Sbjct: 3736 GEGQYGRLGQGNSDDLFV--PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDG 3793

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +  +LGH        P  +   L+   VVQ+A G+ +    A   +   +++ G G  G+
Sbjct: 3794 DFGKLGHGNNERQRRPKQI-EALQGEDVVQLACGFRHS---AVVTADGKLFTFGSGESGR 3849

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGN 295
            LG  S +++  P  +   +  ++  V  + G  H  V+  DG  V  +G G YG LG G+
Sbjct: 3850 LGQRSTSNKMQPERVAALEGYHVGQV--SCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS 3907

Query: 296  EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
               +  P+ V+ L +     V  G   + V++ DG VY+FG  +   +G   + D     
Sbjct: 3908 STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG--QERLIG---LPDSMLKN 3962

Query: 356  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
             +N   PQ+V SL+ +    + +          H  AL+ +G +YA+G   +GQLG+
Sbjct: 3963 RSN---PQVVPSLEGLFIEDIAVGC-------EHVLALSSTGDIYAWGCNSEGQLGL 4009



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            E  C +   +   G   S+ + + G VY+FG      L     +    P+ + SL+G+ I
Sbjct: 3918 EQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFI 3977

Query: 98   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
               A G    + +S  G +YA+G +S  E + G+    LV  P L+ +L+   + Q + G
Sbjct: 3978 EDIAVGCEHVLALSSTGDIYAWGCNS--EGQLGLGHCNLVKEPTLITALQGKNIKQISAG 4035


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 33/357 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    SL  +R +Q   G    + ++  G+VYA G 
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++FV + A+  G      LS EG VY++  G+D 
Sbjct: 4319 GAAGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376

Query: 180  RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            +LGH     +  P  +E   LLGT     +V IA G  +  A+    S   +Y+ G G  
Sbjct: 4377 KLGHGNRLMYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4427

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            G+LGHG   D+  P+L+E  Q   +  V   +G      V  D  V +WG G YG LG G
Sbjct: 4428 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4487

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +   +P  +++L  +  I V  G   +  ++  G +Y++G G+   LGH         
Sbjct: 4488 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4540

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  P+ V +L+   ++++ I+ T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4541 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4589



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 29/301 (9%)

Query: 116  VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            VY +G   KD  G    G++G+K +  P   E L  +  +  A G+    V+S+EG++Y 
Sbjct: 3256 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3310

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
               G + RLG   + N  EP  L+  L    + ++A       ALA    G  ++S G G
Sbjct: 3311 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKVAVHSGGKHALALTQDG-KIFSWGEG 3368

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG LG
Sbjct: 3369 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3426

Query: 293  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            HG+   +  PK+VQ+L   + I VA G  D  T  ++ DG VYS+G G+   LG    +D
Sbjct: 3427 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3485

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            G         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +L
Sbjct: 3486 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3531

Query: 411  G 411
            G
Sbjct: 3532 G 3532



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 153/322 (47%), Gaps = 8/322 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q   G    +AVT+ G VY+ G  ++G+LG G T+    P  + S+Q + + + A  +G 
Sbjct: 4296 QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4355

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G VY++G+   G+  +G     +   P+L+E L    +V  A G   +A +
Sbjct: 4356 KHCLALSSEGHVYSWGEGDDGKLGHG--NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4413

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + + P  L+  L++  V+ +A G      L C     
Sbjct: 4414 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4471

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L  L  + V  G+  +  + + G + TWG
Sbjct: 4472 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4529

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG ++    P+ V AL   K I +ATG       ++ G+V+++G  +   LG
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589

Query: 345  HNAIADGQGNRHANVLTPQLVT 366
                +  Q  R  + L  + +T
Sbjct: 4590 DGTTSALQRPRLVHALQGKKIT 4611



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 27/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            VY +G N   QLG     +   P     L  ++ I  A G+    ++S  G++YA G+ +
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3315

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+     V  P+L+  L    + + A+  G      L+++G+++++  G D +L
Sbjct: 3316 NGR--LGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKL 3373

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    +  +P  L+ +L++  +  IA G  +  A+    S   +Y+ G G  G+LGHG 
Sbjct: 3374 GHGNSVSLDKPR-LIESLKSKRIRDIACGSGHSAAIT---SSGELYTWGLGEYGRLGHGD 3429

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
               +  P+L++   L+  + + VA G+  A  +    DG V +WG G +G LG G  +  
Sbjct: 3430 TATQMKPKLVQS--LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGC 3487

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
              P ++  LN +  + +  G   +  +++ G+V+++G G+   LGH       GN H +V
Sbjct: 3488 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HV 3539

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P LV  L+   ++VV +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3540 RKPTLVEGLR--GKKVVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3584



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   ++ V S+ G +Y+ G  ++G+LG G       P+  P  S   I+ +   +G  
Sbjct: 3292 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGK 3351

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+++++G+   G+  +G   +  +  P+L+ESLK+  +   A G+  +A ++
Sbjct: 3352 HALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3409

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+ +L    V+Q+A G      +A    G +
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3467

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P LI++   L +  V +  GA  +  + + G V TWG 
Sbjct: 3468 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3525

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY++G  +    G+
Sbjct: 3526 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3585

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             +    +         P LV  L       V    ++SI W
Sbjct: 3586 GSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3618



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I  L G  I+  A G   +  
Sbjct: 4353 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4412

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L  +P+LVE+L++  V+  A G  +  T  ++ +
Sbjct: 4413 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4470

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P  +  +L  + V+++  G  + +AL    SG A+Y
Sbjct: 4471 DNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIY 4526

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG   
Sbjct: 4527 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4584

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4585 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4624



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 123/254 (48%), Gaps = 37/254 (14%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY--CYLLALACQ 220
           +LS  G VY   +G++ +           P  + G  E  PV  IA+     + LAL   
Sbjct: 467 ILSISGNVYMMYYGSETQY----------PQRVYGFSEK-PVTMIASHSDGTHYLALTQD 515

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            S   VYS G G GG+LGHG R     P+L+E   L++     +A G+ ++AV+  +G +
Sbjct: 516 SS---VYSWGNGDGGRLGHGDRVWYDEPKLVEA--LVDKNITFIACGSTYSAVLSSNGEL 570

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCG 338
            TWG G YG LGHGN +   +P +V ALN    ++VA  +GD  T  V+  G V+S+G G
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESG 397
               LG     DG         TP++V  L  +N           +Y     + ALT  G
Sbjct: 631 NYGKLGRGG-CDGSK-------TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYG 674

Query: 398 KLYAFGAGDKGQLG 411
           ++Y +G G+  +LG
Sbjct: 675 EVYTWGKGEGYRLG 688



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   LLA+    
Sbjct: 4253 LSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--- 4308

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4309 ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4368

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G   
Sbjct: 4369 SWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4428

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         LTP+LV +L+  + +V+ ++  +    +A T  +T+   +++
Sbjct: 4429 RLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4475

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4476 WGDGDYGKLG 4485



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 37/307 (12%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLS 165
           M++S +G VY     S  E +Y          PQ V   S K + ++ +         L+
Sbjct: 466 MILSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALT 513

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           ++  VY++  G+  RLGH       EP  L+  L +  +  IA G  Y   L+   S   
Sbjct: 514 QDSSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGE 569

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +Y+ G G  G+LGHG+  +   P L+       +  V   +G      V   G V +WG 
Sbjct: 570 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGD 629

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G YG LG G  +    PK+V  L D+    V  G   +  ++  G+VY++G GE   LGH
Sbjct: 630 GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 689

Query: 346 NAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
                  GN   ++  P+++  L  K+V E  V          N H  ALTE   +Y +G
Sbjct: 690 -------GNEE-HIRYPKVIEVLKPKKVKELCVG---------NFHVLALTEDQLVYGWG 732

Query: 404 AGDKGQL 410
             D GQ+
Sbjct: 733 RNDYGQI 739



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG       P+ + +L    I   A G+  + ++S  
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 567

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G     L+  P LV +L    VV  A G+  +  L        F
Sbjct: 568 GELYTWGRGNYGRLGHGNSDNVLI--PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 625

Query: 174 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SW  GN  +LG         P  ++  L +I V ++  G  +  AL        VY+ G 
Sbjct: 626 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 681

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G +LGHG+    ++P++IE  +   ++ + V  G +H   + +D  V  WG   YG +
Sbjct: 682 GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCV--GNFHVLALTEDQLVYGWGRNDYGQI 739

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                     P +   L+    I +A G   +F
Sbjct: 740 DPALGTIVPEPTLCPTLSGKNIIGLACGLTQSF 772



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 7/184 (3%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   +  +    G  +S  ++S G +Y++G  + G+LGHG ++    P  + +L G  +
Sbjct: 544 EALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMV 603

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
           +  A G+G  +T+ ++ +G V+++G  ++G+    G  G+K   +P++V+ L +I V + 
Sbjct: 604 VYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKV 660

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
             G  F+A L+  G VYT+  G   RLGH  E +   P  ++  L+   V ++  G  ++
Sbjct: 661 YCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPK-VIEVLKPKKVKELCVGNFHV 719

Query: 215 LALA 218
           LAL 
Sbjct: 720 LALT 723



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            Q   V  WG      LG        +P   + L+ +K IH+A G  T FVVS++G +Y+ 
Sbjct: 3252 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3311

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G G +  LG   + D      +NV  P+L+  L Q   + V +          H  ALT+
Sbjct: 3312 GEGTNGRLG---LGDD-----SNVCEPKLIPFLSQYMIKKVAVH-----SGGKHALALTQ 3358

Query: 396  SGKLYAFGAGDKGQLG 411
             GK++++G G+ G+LG
Sbjct: 3359 DGKIFSWGEGEDGKLG 3374



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G +++  A GA  
Sbjct: 3503 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALH 3562

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L +  V + + G+
Sbjct: 3563 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3612



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G  + G+LG G  +    P+ +  L  I + +   G   +  
Sbjct: 610 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 669

Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VY +GK   GE    G    + +  P+++E LK   V +  +GNF    L+ + 
Sbjct: 670 LTAYGEVYTWGK---GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQ 726

Query: 169 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VY   WG           ND  +  P LGT+   P +        ++ LAC
Sbjct: 727 LVY--GWGR----------NDYGQIDPALGTIVPEPTLCPTLSGKNIIGLAC 766


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 33/357 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    SL  +R +Q   G    + ++  G+VYA G 
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++FV + A+  G      LS EG VY++  G+D 
Sbjct: 4352 GAAGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409

Query: 180  RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            +LGH     +  P  +E   LLGT     +V IA G  +  A+    S   +Y+ G G  
Sbjct: 4410 KLGHGNRLMYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4460

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            G+LGHG   D+  P+L+E  Q   +  V   +G      V  D  V +WG G YG LG G
Sbjct: 4461 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4520

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +   +P  +++L  +  I V  G   +  ++  G +Y++G G+   LGH         
Sbjct: 4521 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4573

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  P+ V +L+   ++++ I+ T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4574 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4622



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 29/301 (9%)

Query: 116  VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            VY +G   KD  G    G++G+K +  P   E L  +  +  A G+    V+S+EG++Y 
Sbjct: 3261 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3315

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
               G + RLG   + N  EP  L+  L    + ++A       ALA    G  ++S G G
Sbjct: 3316 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKMAVHSGGKHALALTQDG-KIFSWGEG 3373

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG LG
Sbjct: 3374 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3431

Query: 293  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            HG+   +  PK+VQ+L   + I VA G  D  T  ++ DG VYS+G G+   LG    +D
Sbjct: 3432 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3490

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            G         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +L
Sbjct: 3491 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3536

Query: 411  G 411
            G
Sbjct: 3537 G 3537



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 153/322 (47%), Gaps = 8/322 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q   G    +AVT+ G VY+ G  ++G+LG G T+    P  + S+Q + + + A  +G 
Sbjct: 4329 QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4388

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G VY++G+   G+  +G     +   P+L+E L    +V  A G   +A +
Sbjct: 4389 KHCLALSSEGHVYSWGEGDDGKLGHG--NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4446

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + + P  L+  L++  V+ +A G      L C     
Sbjct: 4447 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4504

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L  L  + V  G+  +  + + G + TWG
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4562

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG ++    P+ V AL   K I +ATG       ++ G+V+++G  +   LG
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622

Query: 345  HNAIADGQGNRHANVLTPQLVT 366
                +  Q  R  + L  + +T
Sbjct: 4623 DGTTSALQRPRLVHALQGKKIT 4644



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 27/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            VY +G N   QLG     +   P     L  ++ I  A G+    ++S  G++YA G+ +
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3320

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+     V  P+L+  L    + + A+  G      L+++G+++++  G D +L
Sbjct: 3321 NGR--LGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKL 3378

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    +  +P  L+ +L++  +  IA G  +  A+    S   +Y+ G G  G+LGHG 
Sbjct: 3379 GHGNSVSLDKPR-LIESLKSKRIRDIACGSGHSAAIT---SSGELYTWGLGEYGRLGHGD 3434

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
               +  P+L++   L+  + + VA G+  A  +    DG V +WG G +G LG G  +  
Sbjct: 3435 TATQMKPKLVQS--LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGC 3492

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
              P ++  LN +  + +  G   +  +++ G+V+++G G+   LGH       GN H +V
Sbjct: 3493 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HV 3544

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P LV  L+   ++VV +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3545 RKPTLVEGLR--GKKVVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3589



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   ++ V S+ G +Y+ G  ++G+LG G       P+  P  S   I+ +   +G  
Sbjct: 3297 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGK 3356

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+++++G+   G+  +G   +  +  P+L+ESLK+  +   A G+  +A ++
Sbjct: 3357 HALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3414

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+ +L    V+Q+A G      +A    G +
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3472

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P LI++   L +  V +  GA  +  + + G V TWG 
Sbjct: 3473 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3530

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY++G  +    G+
Sbjct: 3531 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3590

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             +    +         P LV  L       V    ++SI W
Sbjct: 3591 GSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3623



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I  L G  I+  A G   +  
Sbjct: 4386 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4445

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L  +P+LVE+L++  V+  A G  +  T  ++ +
Sbjct: 4446 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4503

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P  +  +L  + V+++  G  + +AL    SG A+Y
Sbjct: 4504 DNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIY 4559

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG   
Sbjct: 4560 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4617

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4618 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4657



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 37/254 (14%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY--CYLLALACQ 220
           +LS  G VY   +G++ +           P  + G  E  PV  IA+     + LAL   
Sbjct: 475 ILSISGNVYMMYYGSETQY----------PQRVYGFSEK-PVTMIASHSDGTHYLALTQD 523

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            S   VYS G G GG+LGHG R     P+L+E   L++     +A G+ ++AV+  +G +
Sbjct: 524 SS---VYSWGNGDGGRLGHGDRVWYDEPKLVEA--LVDKNITFIACGSTYSAVLSSNGEL 578

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCG 338
            TWG G YG LGHGN +   +P +V ALN    +HVA  +GD  T  V+  G V+S+G G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESG 397
               LG     DG         TP++V  L  +N           +Y     + ALT  G
Sbjct: 639 NYGKLGRGG-CDGSK-------TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYG 682

Query: 398 KLYAFGAGDKGQLG 411
           ++Y +G G+  +LG
Sbjct: 683 EVYTWGKGEGYRLG 696



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   LLA+    
Sbjct: 4286 LSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--- 4341

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4342 ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4401

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G   
Sbjct: 4402 SWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4461

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         LTP+LV +L+  + +V+ ++  +    +A T  +T+   +++
Sbjct: 4462 RLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4508

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4509 WGDGDYGKLG 4518



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 37/307 (12%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLS 165
           M++S +G VY     S  E +Y          PQ V   S K + ++ +         L+
Sbjct: 474 MILSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALT 521

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           ++  VY++  G+  RLGH       EP  L+  L +  +  IA G  Y   L+   S   
Sbjct: 522 QDSSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGE 577

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +Y+ G G  G+LGHG+  +   P L+       +  V   +G      V   G V +WG 
Sbjct: 578 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGD 637

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G YG LG G  +    PK+V  L D+    V  G   +  ++  G+VY++G GE   LGH
Sbjct: 638 GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 697

Query: 346 NAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
                  GN   ++  P+++  L  K+V E  V          N H  ALTE   +Y +G
Sbjct: 698 -------GNEE-HIRYPKVIEVLXTKKVKELCVG---------NFHVLALTEDQLVYGWG 740

Query: 404 AGDKGQL 410
             D GQ+
Sbjct: 741 RNDYGQI 747



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG       P+ + +L    I   A G+  + ++S  
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 575

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G     L+  P LV +L    VV  A G+  +  L        F
Sbjct: 576 GELYTWGRGNYGRLGHGNSDNVLI--PTLVTALNGHMVVHVACGSGDSQTLCVTASGIVF 633

Query: 174 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SW  GN  +LG         P  ++  L +I V ++  G  +  AL        VY+ G 
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 689

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G +LGHG+    ++P++IE      ++ + V  G +H   + +D  V  WG   YG +
Sbjct: 690 GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCV--GNFHVLALTEDQLVYGWGRNDYGQI 747

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                     P +   L+    I +A G   +F
Sbjct: 748 DPALGTVVPEPTLCPTLSGKNIIGLACGLTQSF 780



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 7/184 (3%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   +  +    G  +S  ++S G +Y++G  + G+LGHG ++    P  + +L G  +
Sbjct: 552 EALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMV 611

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
           +  A G+G  +T+ ++ +G V+++G  ++G+    G  G+K   +P++V+ L +I V + 
Sbjct: 612 VHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKV 668

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
             G  F+A L+  G VYT+  G   RLGH  E +   P  ++  L    V ++  G  ++
Sbjct: 669 YCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPK-VIEVLXTKKVKELCVGNFHV 727

Query: 215 LALA 218
           LAL 
Sbjct: 728 LALT 731



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            Q   V  WG      LG        +P   + L+ +K IH+A G  T FVVS++G +Y+ 
Sbjct: 3257 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3316

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G G +  LG   + D      +NV  P+L+  L Q   + + +          H  ALT+
Sbjct: 3317 GEGTNGRLG---LGDD-----SNVCEPKLIPFLSQYMIKKMAVH-----SGGKHALALTQ 3363

Query: 396  SGKLYAFGAGDKGQLG 411
             GK++++G G+ G+LG
Sbjct: 3364 DGKIFSWGEGEDGKLG 3379



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G +++  A GA  
Sbjct: 3508 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALH 3567

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L +  V + + G+
Sbjct: 3568 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3617



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 17/172 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G  + G+LG G  +    P+ +  L  I + +   G   +  
Sbjct: 618 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 677

Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VY +GK   GE    G    + +  P+++E L    V +  +GNF    L+ + 
Sbjct: 678 LTAYGEVYTWGK---GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQ 734

Query: 169 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VY   WG           ND  +  P LGT+   P +        ++ LAC
Sbjct: 735 LVY--GWGR----------NDYGQIDPALGTVVPEPTLCPTLSGKNIIGLAC 774


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 19/341 (5%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+IA +   + +YS+G    G+LGHG + + + P+PI +LQG++I Q A G 
Sbjct: 76  TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGD 135

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++  GQV+++G++  G+   G     L+  PQ +++ + + V   A G   T  +
Sbjct: 136 SHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVCVKMIAAGAEHTTAI 193

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G +Y + WG    LG     +   P  +  ++E   +V +A G+ + ++++   S  
Sbjct: 194 TEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACGWRHSVSVS---SSG 249

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           A+Y+ G    G+LGHG   D   PR +E  + +   P+   +G W H   V +DG++  W
Sbjct: 250 ALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWRHTMAVAEDGKLYGW 306

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G  +      P  V   ++ K + VA G   T  ++E+ +++S+G G S  L
Sbjct: 307 GWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQL 366

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           GH  I D          TP+++ +L        Q+  +N +
Sbjct: 367 GHGEIIDRN--------TPKMIDALSLDGSACKQLESSNVV 399



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 179/380 (47%), Gaps = 27/380 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS A+ S  +V S+G    GQLGHG +E+   P  + S    R+     GA  T+ 
Sbjct: 28  AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIA 87

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  Q+Y++G   FG   +G   +  V +PQ + +L+ + + Q A G+     ++  G
Sbjct: 88  YSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V+++    + +LG     + + P  +    E + V  IAAG  +  A+     G  +Y 
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCVKMIAAGAEHTTAIT---EGGDLYG 201

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG   R D   P  +   +   +  V+VA G  H+  V   G + T+GW +Y
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ +   VP+ ++AL DV    ++ G   T  V+EDG +Y +G  +   +G    
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D       N    Q          ++VQ++      W  HT ALTE+  ++++G G  G
Sbjct: 320 VDHCSPVEVNFPDEQ----------KIVQVACG----WR-HTLALTENKNIFSWGRGASG 364

Query: 409 QLGIELVNNQTERGNPERVD 428
           QLG   +    +R  P+ +D
Sbjct: 365 QLGHGEI---IDRNTPKMID 381



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 24/318 (7%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           +I  +AGA  +  +     V ++G+   G+  +G    + V  P ++ S     V     
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 157 GNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G   T   S  E ++Y++ WG+  RLGH    +   P P++  L+ + + QIA G  + L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIV-ALQGMKIKQIACGDSHCL 139

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            +        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H   + 
Sbjct: 140 TVTFNGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK--MIAAGAEHTTAIT 194

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           + G +  WGWGRYG LG  + +  SVP+ V ++   K + VA G   +  VS  G +Y++
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P+ + +LK V   + QIS      W  HT A+ E
Sbjct: 255 GWSKYGQLGHGDFQDH--------LVPRKLEALKDV--PISQISGG----WR-HTMAVAE 299

Query: 396 SGKLYAFGAGDKGQLGIE 413
            GKLY +G    GQ+G+E
Sbjct: 300 DGKLYGWGWNKFGQVGVE 317


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 174/357 (48%), Gaps = 33/357 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    SL  +R +Q   G      ++  G+VYA G 
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3843

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++FV + A+  G      LS EG VY++  G+D 
Sbjct: 3844 GAVGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901

Query: 180  RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            +LGH     +  P  +E   LLGT     +V IA G  +  A+    S   +Y+ G G  
Sbjct: 3902 KLGHGNRLSYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 3952

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            G+LGHG   D+  P+LIE  Q   +  V   +G      V  D  V +WG G YG LG G
Sbjct: 3953 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4012

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +   +P  +++L  +  I V  G   +  ++  G +Y++G G+   LGH         
Sbjct: 4013 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4065

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  P+ V +L+   ++++ I+ T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4066 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4114



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 150/301 (49%), Gaps = 29/301 (9%)

Query: 116  VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            VY +G   KD  G    G++G+K +  P   E L  +  V  A G+    V+S+EG++Y 
Sbjct: 2792 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2846

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
               G + RLG   + N  EP P +  L    + ++A       ALA    G  V+S G G
Sbjct: 2847 CGEGTNGRLGLGDDSNVCEPKP-IPFLSQYVIKKVAVHSGGKHALALTQDG-KVFSWGEG 2904

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG LG
Sbjct: 2905 EDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 2962

Query: 293  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            HG+   +S PK+VQ+L   + I +A G  D  T  ++ DG VYS+G G+   LG    +D
Sbjct: 2963 HGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-SD 3021

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            G         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +L
Sbjct: 3022 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3067

Query: 411  G 411
            G
Sbjct: 3068 G 3068



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   ++ V S+ G +Y+ G  ++G+LG G       P+PI  L    I+ +   +G  
Sbjct: 2828 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGK 2887

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G   +  +  P+L+ESLK+  +   A G+  +A ++
Sbjct: 2888 HALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 2945

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH       +P  L+ +L    V+QIA G      +A    G+ 
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRVIQIACGSRDAQTMALTADGL- 3003

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P LI++   L +  V +  GA  +  + + G V TWG 
Sbjct: 3004 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3061

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY++G  +      
Sbjct: 3062 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQ--- 3118

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                 G G    N   P LV  L       V    ++SI W
Sbjct: 3119 ----QGNGTTIVNK-KPSLVHELDDARVNRVSCGSSHSIAW 3154



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 152/322 (47%), Gaps = 8/322 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q   G     AVT+ G VY+ G  + G+LG G T+    P  + S+Q + + + A  +G 
Sbjct: 3821 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 3880

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G VY++G+   G+  +G + +     P+L+E L    +V  A G   +A +
Sbjct: 3881 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAI 3938

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + + P  L+  L++  V+ +A G      L C     
Sbjct: 3939 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LIEALQDYKVIDVACGSGDAQTL-CVTDDD 3996

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L  L  + V  G+  +  + + G + TWG
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4054

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG ++    P+ V AL   K I +ATG       ++ G+V+++G  +   LG
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114

Query: 345  HNAIADGQGNRHANVLTPQLVT 366
                +  Q  R  + L  + +T
Sbjct: 4115 DGTTSALQRPRLVHALQGKKIT 4136



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I  L G  I+  A G   +  
Sbjct: 3878 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L  +P+L+E+L++  V+  A   G+  T  ++ +
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 3995

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V+++  G  + +AL    SG A+Y
Sbjct: 3996 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVIKVECGSQFSVALT--RSG-AIY 4051

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG   
Sbjct: 4052 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4109

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4110 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4149



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 133/297 (44%), Gaps = 43/297 (14%)

Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
           SP   +++  + + Q         +LS  G VY   +G+             E   + G 
Sbjct: 451 SPVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGS-------------ETQRVYGF 497

Query: 199 LENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
            E  P+  IA+     + LAL    S   VYS G G  G+LGHG+ T    P+LIE    
Sbjct: 498 SEK-PITMIASHSDGTHYLALTQDNS---VYSWGNGECGRLGHGNMTWYDEPKLIEALVE 553

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIH 315
            N+    +A G+ ++A +  +G + TWG G YG LGHGN + +  +P +V ALN    ++
Sbjct: 554 KNI--TFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVY 611

Query: 316 VATG---DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
           VA G   D  T  V+  G V+S+G G    LG     DG         TP++V  L  +N
Sbjct: 612 VACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGG-CDGSK-------TPKIVDKLLDIN 663

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
              V             + ALT  G++Y +G G+  +LG     N+     P+ +DI
Sbjct: 664 VAKVYCG-------QQFSAALTAYGEVYTWGKGEDYKLG---HGNEDHVRYPKIIDI 710



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   L A+   
Sbjct: 3777 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 3833

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3834 -ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G  
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         LTP+L+ +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 3953 GRLGHGDSEDQ--------LTPKLIEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 3999

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4000 SWGDGDYGKLG 4010



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 23/295 (7%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIR 96
           EA   +  +    G  +S A++S G +Y++G  + G+LGHG ++++   P  + +L G  
Sbjct: 549 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHM 608

Query: 97  IIQAAAGAGR---TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVV 152
           ++  A G GR   T+ ++ +G V+++G  + G+    G  G+K   +P++V+ L +I V 
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSK---TPKIVDKLLDINVA 665

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           +   G  F+A L+  G VYT+  G D +LGH  E +   P  ++  L+   +  +  G+ 
Sbjct: 666 KVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPK-IIDILKTKKIKDLYIGHL 724

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL--------QPVVV 264
           ++LAL        VY  G    G++     T    P L   F   N+        Q    
Sbjct: 725 HVLALT---EDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAW 781

Query: 265 AAGAWHAA-VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
              AW  A  V     +C   +     L   N+ CE +P       D + + VAT
Sbjct: 782 CTAAWSVANRVAFVVDICEETFRLLDTL--LNKACEGLPSTRPPTQDRECLAVAT 834



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 12/237 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG       P+ I +L    I   A G+  +  +S  
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRV 170
           G++Y +G+ ++G+  +G    K V  P LV +L    VV  A G   +  T  ++  G V
Sbjct: 573 GELYTWGRGNYGKLGHG-NSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIV 631

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           +++  GN  +LG         P  ++  L +I V ++  G  +  AL        VY+ G
Sbjct: 632 FSWGDGNHGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGQQFSAALTAYGE---VYTWG 687

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G   KLGHG+    ++P++I+  +   ++ + +  G  H   + +D  V  +GWGR
Sbjct: 688 KGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLV--YGWGR 740



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 139/332 (41%), Gaps = 42/332 (12%)

Query: 86  PRPI--RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P P+   ++  + I Q        +++S  G VY     S  +  YG             
Sbjct: 450 PSPVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGSETQRVYGF------------ 497

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
            S K I ++ +         L+++  VY++  G   RLGH       EP  L+  L    
Sbjct: 498 -SEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPK-LIEALVEKN 555

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPV 262
           +  IA G  Y  AL+   S   +Y+ G G  GKLGHG S  D   P L+     LN   V
Sbjct: 556 ITFIACGSTYSAALS---SNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTA---LNGHMV 609

Query: 263 V-VAAGA---WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           V VA G         V   G V +WG G +G LG G  +    PK+V  L D+    V  
Sbjct: 610 VYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYC 669

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  ++  G+VY++G GE   LGH       GN   +V  P+++  LK    + + I
Sbjct: 670 GQQFSAALTAYGEVYTWGKGEDYKLGH-------GNED-HVRYPKIIDILKTKKIKDLYI 721

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                   + H  ALTE   +Y +G  D GQ+
Sbjct: 722 G-------HLHVLALTEDQLVYGWGRNDHGQI 746



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G +II  A GA  
Sbjct: 3039 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 3098

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L +  V + + G+
Sbjct: 3099 CLAVTDIGQVYAWGDNDHGQQGNGT--TIVNKKPSLVHELDDARVNRVSCGS 3148



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            Q   V  WG      LG        +P   + L+ +K +H+A G  T FVVS++G +Y+ 
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G G +  LG   + D      +NV  P+ +  L Q   + V +          H  ALT+
Sbjct: 2848 GEGTNGRLG---LGDD-----SNVCEPKPIPFLSQYVIKKVAVH-----SGGKHALALTQ 2894

Query: 396  SGKLYAFGAGDKGQLG 411
             GK++++G G+ G+LG
Sbjct: 2895 DGKVFSWGEGEDGKLG 2910


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 19/341 (5%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+IA +   + +YS+G    G+LGHG + + + P+PI +LQG++I Q A G 
Sbjct: 76  TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGD 135

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++  GQV+++G++  G+   G     L+  PQ +++ + + V   A G   T  +
Sbjct: 136 SHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVCVKMIAAGAEHTTAI 193

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G +Y + WG    LG     +   P  +  ++E   +V +A G+ + ++++   S  
Sbjct: 194 TEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACGWRHSVSVS---SSG 249

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           A+Y+ G    G+LGHG   D   PR +E  + +   P+   +G W H   V +DG++  W
Sbjct: 250 ALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWRHTMAVAEDGKLYGW 306

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G  +      P  V   ++ K + VA G   T  ++E+ +++S+G G S  L
Sbjct: 307 GWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQL 366

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           GH  I D          TP+++ +L        Q+  +N +
Sbjct: 367 GHGEIIDRN--------TPKMIDALSLDGSACKQLESSNVV 399



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 179/380 (47%), Gaps = 27/380 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS A+ S  +V S+G    GQLGHG +E+   P  + S    R+     GA  T+ 
Sbjct: 28  AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIA 87

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  Q+Y++G   FG   +G   +  V +PQ + +L+ + + Q A G+     ++  G
Sbjct: 88  YSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V+++    + +LG     + + P  +    E + V  IAAG  +  A+     G  +Y 
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCVKMIAAGAEHTTAIT---EGGDLYG 201

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG   R D   P  +   +   +  V+VA G  H+  V   G + T+GW +Y
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ +   VP+ ++AL DV    ++ G   T  V+EDG +Y +G  +   +G    
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D       N    Q          ++VQ++      W  HT ALTE+  ++++G G  G
Sbjct: 320 VDHCSPVEVNFPDEQ----------KIVQVACG----WR-HTLALTENKNIFSWGRGASG 364

Query: 409 QLGIELVNNQTERGNPERVD 428
           QLG   +    +R  P+ +D
Sbjct: 365 QLGHGEI---IDRNTPKMID 381



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 24/318 (7%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           +I  +AGA  +  +     V ++G+   G+  +G    + V  P ++ S     V     
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 157 GNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G   T   S  E ++Y++ WG+  RLGH    +   P P++  L+ + + QIA G  + L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIV-ALQGMKIKQIACGDSHCL 139

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            +        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H   + 
Sbjct: 140 TVTFNGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK--MIAAGAEHTTAIT 194

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           + G +  WGWGRYG LG  + +  SVP+ V ++   K + VA G   +  VS  G +Y++
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P+ + +LK V   + QIS      W  HT A+ E
Sbjct: 255 GWSKYGQLGHGDFQDH--------LVPRKLEALKDV--PISQISGG----WR-HTMAVAE 299

Query: 396 SGKLYAFGAGDKGQLGIE 413
            GKLY +G    GQ+G+E
Sbjct: 300 DGKLYGWGWNKFGQVGVE 317


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 174/357 (48%), Gaps = 33/357 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    SL  +R +Q   G      ++  G+VYA G 
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 4012

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++FV + A+  G      LS EG VY++  G+D 
Sbjct: 4013 GAVGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070

Query: 180  RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            +LGH     +  P  +E   LLGT     +V IA G  +  A+    S   +Y+ G G  
Sbjct: 4071 KLGHGNRLSYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4121

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            G+LGHG   D+  P+LIE  Q   +  V   +G      V  D  V +WG G YG LG G
Sbjct: 4122 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4181

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +   +P  +++L  +  + V  G   +  ++  G +Y++G G+   LGH         
Sbjct: 4182 GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4234

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  P+ V +L+   ++++ I+ T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4235 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4283



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 151/302 (50%), Gaps = 31/302 (10%)

Query: 116  VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            VY +G   KD  G    G++G+K +  P   E L  +  V  A G+    V+S+EG++Y 
Sbjct: 2936 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2990

Query: 173  FSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
               G + RLG   + N  EP P+   +   I  V + +G  + LAL        V+S G 
Sbjct: 2991 CGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALT---QDGKVFSWGE 3047

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG L
Sbjct: 3048 GEDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRL 3105

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            GHG+   +S PK+VQ+L   + I +A G  D  T  ++ DG VYS+G G+   LG    +
Sbjct: 3106 GHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-S 3164

Query: 350  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
            DG         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +
Sbjct: 3165 DG-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFR 3210

Query: 410  LG 411
            LG
Sbjct: 3211 LG 3212



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   ++ V S+ G +Y+ G  ++G+LG G       P+PI  L    I+ +   +G  
Sbjct: 2972 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGK 3031

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G   +  +  P+L+ESLK+  +   A G+  +A ++
Sbjct: 3032 HALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 3089

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH       +P  L+ +L    ++QIA G      +A    G+ 
Sbjct: 3090 SSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRIIQIACGSRDAQTMALTADGL- 3147

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P LI++   L +  V +  GA  +  + + G V TWG 
Sbjct: 3148 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3205

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY++G  +      
Sbjct: 3206 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQ--- 3262

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                 G G    N   P LV  L       V    ++SI W
Sbjct: 3263 ----QGNGTTIVNK-KPSLVHELDDARVNRVSCGSSHSIAW 3298



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 8/322 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q   G     AVT+ G VY+ G  + G+LG G T+    P  + S+Q + + + A  +G 
Sbjct: 3990 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4049

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G VY++G+   G+  +G + +     P+L+E L    +V  A G   +A +
Sbjct: 4050 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAI 4107

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + + P  L+  L++  V+ +A G      L C     
Sbjct: 4108 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LIEALQDYKVIDVACGSGDAQTL-CVTDDD 4165

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L  L  V V  G+  +  + + G + TWG
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVVKVECGSQFSVALTRSGAIYTWG 4223

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG ++    P+ V AL   K I +ATG       ++ G+V+++G  +   LG
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283

Query: 345  HNAIADGQGNRHANVLTPQLVT 366
                +  Q  R  + L  + +T
Sbjct: 4284 DGTTSALQRPRLVHALQGKKIT 4305



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I  L G  I+  A G   +  
Sbjct: 4047 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L  +P+L+E+L++  V+  A   G+  T  ++ +
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 4164

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG A+Y
Sbjct: 4165 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVVKVECGSQFSVALT--RSG-AIY 4220

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG   
Sbjct: 4221 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4278

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4279 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4318



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 40/297 (13%)

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           +SP   +++  + + Q         +LS  G VY   +G++ +           P  + G
Sbjct: 450 SSPFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYGSETQY----------PQRVYG 499

Query: 198 TLENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             E  P++ IA+     + LAL    S   VYS G G GG+LGHG R     P+LIE   
Sbjct: 500 FSEK-PIIMIASHSDGTHYLALTQDNS---VYSWGNGDGGRLGHGDRAWYDEPKLIEALV 555

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
             N+    +A G+ ++A +  +G + TWG G YG LGHGN +   +P +V ALN    ++
Sbjct: 556 EKNI--TFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVY 613

Query: 316 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           VA  +GD  T  V+  G V+S+G G    LG     DG         TP++V  L  +N 
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGG-CDGSK-------TPKIVDKLLDIN- 664

Query: 374 RVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
                     +Y     + ALT  G++Y +G G+  +LG     N+     P+ +DI
Sbjct: 665 -------VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG---HGNEDHVRYPKIIDI 711



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 150/341 (43%), Gaps = 38/341 (11%)

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
           S +LG+G++     P    ++  + I Q        M++S  G VY     S  E +Y  
Sbjct: 443 SVKLGNGSS-----PFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYGS--ETQY-- 493

Query: 132 QGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
                   PQ V   S K I ++ +         L+++  VY++  G+  RLGH      
Sbjct: 494 --------PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWY 545

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
            EP  L+  L    +  IA G  Y  AL+   S   +Y+ G G  G+LGHG+  +   P 
Sbjct: 546 DEPK-LIEALVEKNITFIACGSTYSAALS---SNGELYTWGRGNYGRLGHGNSDNVMIPT 601

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           L+       +  V   +G      V   G V +WG G YG LG G  +    PK+V  L 
Sbjct: 602 LVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLL 661

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D+    V  G   +  ++  G+VY++G GE+  LGH       GN   +V  P+++  LK
Sbjct: 662 DINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGH-------GNED-HVRYPKIIDILK 713

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
              ++V ++ +      N H  ALTE   +Y +G  D GQ+
Sbjct: 714 --TKKVKELCVG-----NLHVLALTEDQLIYGWGRNDYGQI 747



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   L A+   
Sbjct: 3946 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 4002

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4003 -ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G  
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         LTP+L+ +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4122 GRLGHGDSEDQ--------LTPKLIEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4168

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4169 SWGDGDYGKLG 4179



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG       P+ I +L    I   A G+  +  +S  
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G     ++  P LV +L    VV  A G+  +  L        F
Sbjct: 576 GELYTWGRGNYGRLGHGNSDNVMI--PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633

Query: 174 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SW  GN  +LG         P  ++  L +I V ++  G  +  AL        VY+ G 
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 689

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHG+    ++P++I+  +   ++ + V  G  H   + +D  +  WG   YG +
Sbjct: 690 GEAYRLGHGNEDHVRYPKIIDILKTKKVKELCV--GNLHVLALTEDQLIYGWGRNDYGQI 747

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                     P +   L+    I +A G   +F
Sbjct: 748 DPALGTVVPEPTLCPTLSGKNVIGLACGPTQSF 780



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 7/184 (3%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   +  +    G  +S A++S G +Y++G  + G+LGHG ++    P  + +L G  +
Sbjct: 552 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMV 611

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
           +  A G+G  +T+ ++ +G V+++G  ++G+    G  G+K   +P++V+ L +I V + 
Sbjct: 612 VYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKV 668

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
             G  F+A L+  G VYT+  G   RLGH  E +   P  ++  L+   V ++  G  ++
Sbjct: 669 YCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPK-IIDILKTKKVKELCVGNLHV 727

Query: 215 LALA 218
           LAL 
Sbjct: 728 LALT 731



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G ++I  A GA  
Sbjct: 3183 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALH 3242

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L +  V + + G+
Sbjct: 3243 CLAVTDIGQVYAWGDNDHGQQGNGT--TIVNKKPSLVHELDDARVNRVSCGS 3292



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            Q   V  WG      LG        +P   + L+ +K +H+A G  T FVVS++G +Y+ 
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2991

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G G +  LG   + D      +NV  P+ +  L Q   + V +          H  ALT+
Sbjct: 2992 GEGTNGRLG---LGDD-----SNVCEPKPIPFLSQYVIKKVSVH-----SGGKHALALTQ 3038

Query: 396  SGKLYAFGAGDKGQLG 411
             GK++++G G+ G+LG
Sbjct: 3039 DGKVFSWGEGEDGKLG 3054


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 174/357 (48%), Gaps = 33/357 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    SL  +R +Q   G      ++  G+VYA G 
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+ GT  V  P L+ES++++FV + A+  G      LS EG VY++  G+D 
Sbjct: 3956 GAVGR--LGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013

Query: 180  RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            +LGH     +  P  +E   LLGT     +V +A G  +  A+    S   +Y+ G G  
Sbjct: 4014 KLGHGNRLSYDRPKLIEE--LLGT----EIVDVACGGHHSAAIT---SAGWLYTWGKGRY 4064

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            G+LGHG   D+  P+L+E  Q   +  V   +G      V  D  V +WG G YG LG G
Sbjct: 4065 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4124

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +   VP  +++L  +  I V  G   +  ++  G +Y++G G+   LGH         
Sbjct: 4125 GSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGT------- 4177

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4178 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4226



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   ++ V S+ G +Y+ G  ++G+LG G       P+PI  L    I+ +   +G  
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK 3006

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G      +  P+L+ESLK+  +   A G+  +A ++
Sbjct: 3007 HALALTQDGRVFSWGEGEDGKLGHG--NCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+ +L    V+Q+A G      +A    G +
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3122

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P L+++   L +  V +  GA  +  + + G V TWG 
Sbjct: 3123 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3180

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY++G  +    G+
Sbjct: 3181 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3240

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             +    +         P LV  L       V    ++SI W
Sbjct: 3241 GSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3273



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 151/322 (46%), Gaps = 8/322 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q   G     AVT+ G VY+ G  + G+LG G T+    P  + S+Q + + + A  +G 
Sbjct: 3933 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGG 3992

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G VY++G+   G+  +G + +     P+L+E L    +V  A G   +A +
Sbjct: 3993 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAI 4050

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + + P  L+  L++  V+ +A G      L C     
Sbjct: 4051 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4108

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L  L  + V  G+  +  + + G + TWG
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLAGLGVIKVECGSQFSVALTRSGSIYTWG 4166

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG ++    P+ V AL   K I +ATG       S+ G+V+++G  +   LG
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226

Query: 345  HNAIADGQGNRHANVLTPQLVT 366
                   Q  R  + L  + +T
Sbjct: 4227 DGTTCALQRPRLVHALQGKKIT 4248



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 179/371 (48%), Gaps = 34/371 (9%)

Query: 45   NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
            + + +  P HS        VY +G N   QLG     +   P    SL  ++ +  A G+
Sbjct: 2899 SQRGVETPQHS-------AVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGS 2951

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTA 162
                ++S  G++YA G+ + G    G  G      P+ +  L    + + A+  G     
Sbjct: 2952 KTLFVVSQEGKLYACGEGTNGRLGLGDDGN--ACEPKPIPFLSQYVIKKVAVHSGGKHAL 3009

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
             L+++GRV+++  G D +LGH    +  +P  L+ +L++  +  +A G  +  A+    S
Sbjct: 3010 ALTQDGRVFSWGEGEDGKLGHGNCSSLDKPR-LIESLKSKRIRDVACGSGHSAAIT---S 3065

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRV 280
               +Y+ G G  G+LGHG    +  P+L++   L+  + + VA G+  A  +    DG V
Sbjct: 3066 SGELYTWGLGEYGRLGHGDTNTQLKPKLVQ--SLVGQRVIQVACGSRDAQTMALTADGSV 3123

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG G +G LG G  +    P +V  LN +  + +  G   +  +++ G+V+++G G+ 
Sbjct: 3124 YSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDY 3183

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH       GN H +V  P LV  L+   ++V+ +++        H  A+T++G++Y
Sbjct: 3184 FRLGH-------GNDH-HVRKPTLVEGLR--GKKVIHVAVG-----ALHCLAVTDTGQVY 3228

Query: 401  AFGAGDKGQLG 411
            A+G  D GQ G
Sbjct: 3229 AWGDNDHGQQG 3239



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 153/337 (45%), Gaps = 29/337 (8%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +PR I SL+  RI   A G+G +  
Sbjct: 3003 SGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAA 3062

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P+LV+SL    V+Q A G  +  T  L+ +
Sbjct: 3063 ITSSGELYTWGLGEYGRLGHGDTNTQL--KPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3120

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G VY++  G+  +LG         P  L+  L  + VVQI  G  + LAL        V+
Sbjct: 3121 GSVYSWGDGDFGKLGRGGSDGCYTPL-LVDRLNGLGVVQIECGAQFSLALT---KYGEVW 3176

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P L+E  +    + + VA GA H   V   G+V  WG   
Sbjct: 3177 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQVYAWGDND 3234

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G  G+G+      P +V  L+D +   V+                   CG S S+    
Sbjct: 3235 HGQQGNGSTIVNKKPSLVHELDDARVNRVS-------------------CGSSHSIAWVL 3275

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
                  N    V  P     L Q + R+  I  T SI
Sbjct: 3276 TDQPAANNQEPVTFPTAKDPLGQASLRLKNILDTESI 3312



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RP+ I  L G  I+  A G   +  
Sbjct: 3990 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L  +P+LVE+L++  V+  A   G+  T  ++ +
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4107

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V+++  G  + +AL    SG ++Y
Sbjct: 4108 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVIKVECGSQFSVALT--RSG-SIY 4163

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG   
Sbjct: 4164 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDND 4221

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4222 EGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLAWS 4261



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 43/295 (14%)

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++G  ++G  G+    SP   +++  + + Q         +LS  G VY   +G++ +  
Sbjct: 440 AWGSVKFGGTGS----SPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYGSETQY- 494

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
                    P  + G  +   V  IA+   G  YL AL    S   VYS G G GG+LGH
Sbjct: 495 ---------PQRVYGFSDKF-VAMIASHPDGKHYL-ALTEDSS---VYSWGNGDGGRLGH 540

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G RT  + P+LIE   L++     +A G+ ++A +  +G + TWG G YG LGHGN +  
Sbjct: 541 GDRTWYEEPKLIES--LVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDV 598

Query: 300 SVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
            VP +V ALN    ++VA  +GD  T  V+  G V+S+G G+   LG       +     
Sbjct: 599 MVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSK----- 653

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 411
              TP++V  L  +N           +Y     + ALT  G++Y +G G+  +LG
Sbjct: 654 ---TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 138/306 (45%), Gaps = 35/306 (11%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 164
           M++S +G VY     S  E +Y          PQ V    + FV   A    G  + A L
Sbjct: 475 MILSTSGNVYMMYYGS--ETQY----------PQRVYGFSDKFVAMIASHPDGKHYLA-L 521

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +  VY++  G+  RLGH       EP  L+ +L +  +  IA G  Y  AL+   S  
Sbjct: 522 TEDSSVYSWGNGDGGRLGHGDRTWYEEPK-LIESLVDKNITFIACGSTYSAALS---SNG 577

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y+ G G  G+LGHG+  D   P L+       +  V   +G      V   G V +WG
Sbjct: 578 ELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWG 637

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G YG LG G       PK+V  L D+    V  G   +  ++  G+VY++G GE+  LG
Sbjct: 638 DGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H       GN   +V  P+ + +LK   ++V ++ +      + H  ALTE   +Y +G 
Sbjct: 698 H-------GNEE-HVRYPKAIEALK--TKKVKELCVG-----SLHVLALTEDQLVYGWGR 742

Query: 405 GDKGQL 410
            D GQ+
Sbjct: 743 NDYGQI 748



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   L A+    
Sbjct: 3890 LSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--- 3945

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3946 ADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4005

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG G  G LGHGN      PK+++ L   + + VA G + +  ++  G +Y++G G   
Sbjct: 4006 SWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYG 4065

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         LTP+LV +L+  + +V+ ++  +    +A T  +T+   +++
Sbjct: 4066 RLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4112

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4113 WGDGDYGKLG 4122



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG       P+ I SL    I   A G+  +  +S  
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G     +V  P LV +L    +V  A G+  +  L        F
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMV--PTLVSALNGHMIVYVACGSGDSQTLCVTASGIVF 634

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+    +LG         P  ++  L +I V ++  G  +  AL        VY+ G 
Sbjct: 635 SWGDGDYGKLGRGGCNGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 690

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHG+    ++P+ IE  +   ++ + V  G+ H   + +D  V  WG   YG +
Sbjct: 691 GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCV--GSLHVLALTEDQLVYGWGRNDYGQI 748

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                   S P +   L+    I +  G   +F
Sbjct: 749 DPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSF 781



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 95/170 (55%), Gaps = 7/170 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A++S G +Y++G  + G+LGHG +++   P  + +L G  I+  A G+G  +T+
Sbjct: 566 GSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTL 625

Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            ++ +G V+++G   +G+    G  G+K   +P++V+ L +I V +   G  F+A L+  
Sbjct: 626 CVTASGIVFSWGDGDYGKLGRGGCNGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 682

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           G VYT+  G   RLGH  E +   P   +  L+   V ++  G  ++LAL
Sbjct: 683 GEVYTWGKGEAYRLGHGNEEHVRYPKA-IEALKTKKVKELCVGSLHVLAL 731



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 19/200 (9%)

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            P   AVY  G     +LG    +  K P   E   L  L+PV +A G+    VV Q+G++
Sbjct: 2906 PQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSES--LSKLKPVHIAGGSKTLFVVSQEGKL 2963

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCG 338
               G G  G LG G++     PK +  L+   +K + V +G      +++DG V+S+G G
Sbjct: 2964 YACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEG 3023

Query: 339  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
            E   LGH       GN  +++  P+L+ SLK    R V          + H+ A+T SG+
Sbjct: 3024 EDGKLGH-------GN-CSSLDKPRLIESLKSKRIRDVACG-------SGHSAAITSSGE 3068

Query: 399  LYAFGAGDKGQLGIELVNNQ 418
            LY +G G+ G+LG    N Q
Sbjct: 3069 LYTWGLGEYGRLGHGDTNTQ 3088



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG      +P  +  L+G ++I  A GA  
Sbjct: 3158 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALH 3217

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D GQVYA+G +  G+   G   T +   P LV  L +  V + + G+
Sbjct: 3218 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3267



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G    G+LG G       P+ +  L  I + +   G   +  
Sbjct: 619 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAA 678

Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VY +GK   GEA   G    + V  P+ +E+LK   V +  +G+     L+ + 
Sbjct: 679 LTAYGEVYTWGK---GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQ 735

Query: 169 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            VY   WG           ND  +  P LGT+ + P +        ++ L C P+
Sbjct: 736 LVY--GWGR----------NDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPT 778


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4130

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L D+  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4191 KVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4242

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4243 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V+ P   E L N+ VVQ A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P+LI  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G++
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH   
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3245

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3246 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3291

Query: 409  QLG 411
            Q G
Sbjct: 3292 QQG 3294



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 18/339 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L +L  V V  G+  +  + 
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTDLGVVKVECGSQFSVALT 4218

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            G  +   LG     DG  N    +  P+LV +L  K++N
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4309



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV+SL  +
Sbjct: 449 LANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         LS  G V+++  G+  RLGH       EP     L G      V
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG ++ +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L ++ VV++  G  + +AL    SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTDLGVVKVECGSQFSVALT--KSG-AVY 4224

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4322



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+++++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3057 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ +V+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 725



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG+   G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH T+ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYA 3284

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3311



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+++ G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHG+    ++P+L+E  +    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4006

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD++++G G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4127 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4173

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4174 WGDGDYGKLG 4183



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + I++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY +GK       +G +  + V  P+L+E LK   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318

Query: 155  AIGN 158
            A G+
Sbjct: 3319 ACGS 3322



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
           L NL  V +A       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 449 LANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498

Query: 316 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 371
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+L+++L  KQ 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKLISALSGKQA 550

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 27/380 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S  VV S+G    GQLGHG T++   P  + +L   +I   A GA  T+ 
Sbjct: 20  AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLA 79

Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  ++Y++G   FG   +G     L+  PQ + +L+ + + Q A G+     ++ EG
Sbjct: 80  YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 137

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +  T + +P+  +AAG  + +A+        +Y 
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 193

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +       +  V+VA G  H   V   G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHGN E   VP+ +QAL+D     V+ G   +  ++  G +Y +G  +    G   +
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK---FGQVGV 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D       NV     V      +++VVQIS      W  HT A+TE   ++++G G  G
Sbjct: 309 GD-------NVDRCSPVQVKFPHDQKVVQISCG----WR-HTIAVTEKENVFSWGRGTNG 356

Query: 409 QLGIELVNNQTERGNPERVD 428
           QLG     +  +R +P+ ++
Sbjct: 357 QLGH---GDTVDRNSPKIIE 373



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R++  +AGA  T+ +     V ++G+   G+  +G    +L+  P  + +L    +   A
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71

Query: 156 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S     +Y++ WG+  RLGH    + + P P++  L+ + + QIA G  + 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G+  D   P+ I+ FQ + ++  +VAAGA H+  +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            ++G +  WGWGRYG LG G+     +P+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH    D         L PQ + +L   ++ + Q+S      W  H+ ALT
Sbjct: 246 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 290

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +G LY +G    GQ+G   V +  +R +P +V
Sbjct: 291 STGLLYGWGWNKFGQVG---VGDNVDRCSPVQV 320



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 147/305 (48%), Gaps = 17/305 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG GT+E+   P+ I++ QG+ I   AAGA  
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEH 181

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I++ G++Y +G   +G    G +  + +  P+ V S+    +V  A G   T  +S 
Sbjct: 182 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSS 239

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + P  L   L +  + Q++ G+ + +AL    S   +
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 295

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +  + Q VV  +  W H   V +   V +WG 
Sbjct: 296 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G  G LGHG+    + PK+++AL+         G     + S + D+ S   G S S  +
Sbjct: 353 GTNGQLGHGDTVDRNSPKIIEALS-------VDGSSGPHIESSNTDLLSGKSGASLSERY 405

Query: 346 NAIAD 350
             + D
Sbjct: 406 AVVPD 410



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           +A   +  SQ   G  HS+A+TS G++Y +G N  GQ+G G   +   P  ++     ++
Sbjct: 269 QALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKV 328

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+++G+ + G+  +G   T    SP+++E+L
Sbjct: 329 VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG--DTVDRNSPKIIEAL 375


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 25/363 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  VV S+G    GQLGHG T++   P  + +L G  II    GA  TM 
Sbjct: 21  AGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMA 80

Query: 110 ISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++G+ VY++G   FG   +G     L+  P  +++L+ + + Q A G+     ++ + 
Sbjct: 81  RSESGRDVYSWGWGDFGRLGHGDHSDLLI--PHPIKALQGLMIQQIACGDSHCLAVTMDS 138

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V ++    +  LG  T  + + P  +    E IP+  +AAG  + +A+    +   +Y 
Sbjct: 139 QVLSWGRNQNGELGLGTAEDSLLPQKIQ-IFEEIPIKMVAAGAEHSVAITKDGN---LYG 194

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P   E+  +   +  +VA G  H   V   G + T GWG+Y
Sbjct: 195 WGWGRYGNLGLGDRNDRLLP---EKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKY 251

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP+ VQAL+D     V+ G   +  ++  G +  +G  +   +G    
Sbjct: 252 GQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNN 311

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D                S  QVN    Q     S  W  HT A+TE   +Y++G G  G
Sbjct: 312 FD--------------CCSPMQVNFPHDQKVQMISCGWR-HTIAVTERENVYSWGRGANG 356

Query: 409 QLG 411
           QLG
Sbjct: 357 QLG 359



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 157/318 (49%), Gaps = 25/318 (7%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R++  +AGA  ++ +     V ++G+   G+  +G    +L   P  + +L    ++   
Sbjct: 15  RVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF--PTKLSALDGQDIICVT 72

Query: 156 IGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S  GR VY++ WG+  RLGH    + + PHP+   L+ + + QIA G  + 
Sbjct: 73  CGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIK-ALQGLMIQQIACGDSHC 131

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+        V S G    G+LG G+  D   P+ I+ F+ + ++  +VAAGA H+  +
Sbjct: 132 LAVTMDSQ---VLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIK--MVAAGAEHSVAI 186

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     +P+ V    D  A+ VA G   T  VS  G +Y+
Sbjct: 187 TKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAM-VACGWRHTICVSSSGGLYT 245

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            G G+   LGH    D         L P+ V +L   ++ + Q+S      W  H+ ALT
Sbjct: 246 NGWGKYGQLGHGDFEDH--------LVPRKVQALS--DKFISQVSGG----WR-HSMALT 290

Query: 395 ESGKLYAFGAGDKGQLGI 412
            SG+L  +G    GQ+G+
Sbjct: 291 SSGQLLGWGWNKFGQIGV 308



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 11/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT    V S+G N +G+LG GT E+   P+ I+  + I I   AAGA  
Sbjct: 123 QIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEH 182

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I+  G +Y +G   +G    G +  +L+     V+  K   V   A G   T  +S 
Sbjct: 183 SVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMV---ACGWRHTICVSS 239

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT  WG   +LGH    + + P  +   L +  + Q++ G+ + +AL    S   +
Sbjct: 240 SGGLYTNGWGKYGQLGHGDFEDHLVPRKVQ-ALSDKFISQVSGGWRHSMALT---SSGQL 295

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
              G    G++G G+  D   P    Q    + Q V + +  W H   V +   V +WG 
Sbjct: 296 LGWGWNKFGQIGVGNNFDCCSPM---QVNFPHDQKVQMISCGWRHTIAVTERENVYSWGR 352

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG+G     +VP +++A +
Sbjct: 353 GANGQLGNGETIDRNVPTIIEAFS 376



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 26/229 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V+ ++AG  + +AL    SG  V S G G  G+LGHG   D   P    +   L+ Q ++
Sbjct: 16  VLLVSAGASHSVALL---SGNVVCSWGRGEDGQLGHGDTDDRLFP---TKLSALDGQDII 69

Query: 264 -VAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            V  GA H     + GR V +WGWG +G LGHG+     +P  ++AL  +    +A GD 
Sbjct: 70  CVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDS 129

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
               V+ D  V S+G  ++  LG     D         L PQ +   +++  ++V     
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELGLGTAEDS--------LLPQKIQIFEEIPIKMVAAGA- 180

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
                  H+ A+T+ G LY +G G  G LG+    ++ +R  PE+V +D
Sbjct: 181 ------EHSVAITKDGNLYGWGWGRYGNLGL---GDRNDRLLPEKVTVD 220


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 27/380 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S  VV S+G    GQLGHG T++   P  + +L   +I   A GA  T+ 
Sbjct: 20  AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLA 79

Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  ++Y++G   FG   +G     L+  PQ + +L+ + + Q A G+     ++ EG
Sbjct: 80  YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 137

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +  T + +P+  +AAG  + +A+        +Y 
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 193

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +       +  V+VA G  H   V   G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHGN E   VP+ +QAL+D     V+ G   +  ++  G +Y +G  +    G   +
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK---FGQVGV 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D       NV     V      +++VVQIS      W  HT A+TE   ++++G G  G
Sbjct: 309 GD-------NVDRCSPVQVKFPHDQKVVQISCG----WR-HTIAVTEKENVFSWGRGTNG 356

Query: 409 QLGIELVNNQTERGNPERVD 428
           QLG     +  +R +P+ ++
Sbjct: 357 QLG---HGDTVDRNSPKIIE 373



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R++  +AGA  T+ +     V ++G+   G+  +G    +L+  P  + +L    +   A
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71

Query: 156 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S     +Y++ WG+  RLGH    + + P P++  L+ + + QIA G  + 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G+  D   P+ I+ FQ + ++  +VAAGA H+  +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            ++G +  WGWGRYG LG G+     +P+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH    D         L PQ + +L   ++ + Q+S      W  H+ ALT
Sbjct: 246 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 290

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +G LY +G    GQ+G   V +  +R +P +V
Sbjct: 291 STGLLYGWGWNKFGQVG---VGDNVDRCSPVQV 320



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG GT+E+   P+ I++ QG+ I   AAGA  
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEH 181

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I++ G++Y +G   +G    G +  + +  P+ V S+    +V  A G   T  +S 
Sbjct: 182 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSS 239

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + P  L   L +  + Q++ G+ + +AL    S   +
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 295

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +  + Q VV  +  W H   V +   V +WG 
Sbjct: 296 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG+    + PK+++AL+
Sbjct: 353 GTNGQLGHGDTVDRNSPKIIEALS 376



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           +A   +  SQ   G  HS+A+TS G++Y +G N  GQ+G G   +   P  ++     ++
Sbjct: 269 QALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKV 328

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+++G+ + G+  +G   T    SP+++E+L
Sbjct: 329 VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG--DTVDRNSPKIIEAL 375


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G VY +G N  GQLG     +   P P  +L  +R  Q   G      ++  G++YA G 
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGY 2847

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 2848 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2905

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 2906 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGGLYTWGKGRYGRLGH 2961

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      + +D  V +WG G YG LG G  +  
Sbjct: 2962 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGC 3021

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  V AL  + A+ V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3022 KVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3073

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3074 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3118



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA      +Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 2816 EALAALRPAQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2875

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 2876 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 2933

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 2934 AGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 2992

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  ++   L  L  V V  G+  +  + 
Sbjct: 2993 TL-CLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVD--ALTGLGAVKVECGSQFSVALT 3049

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3050 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3109

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 3110 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 3159

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 3160 AGKLPA 3165



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  +  +Q A G+     ++ 
Sbjct: 1785 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTV 1844

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    GV  +  V  P+ V +L +  V + A+  G      L+ +G+V
Sbjct: 1845 EGKVYACGEATNGRLGLGV-SSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKV 1903

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L++  +  IA G  +  AL    S   +Y+ G
Sbjct: 1904 FSWGEGDDGKLGHFSRXNCDKPR-LIEALKSRRIRDIACGSSHSAALT---SSGELYTWG 1959

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   L+  + V VA G+  A  +    +G V +WG G +
Sbjct: 1960 LGEYGRLGHGDNTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDF 2017

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  +VP+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 2018 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 2076

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 2077 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 2122

Query: 409  QLG 411
            Q G
Sbjct: 2123 QQG 2125



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N+  +AG   S+ AVT +G VY+ G  ++G+LG G +      PR + +L    + + A 
Sbjct: 1828 NAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAV 1887

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L +D G+V+++G+   G+  +  +       P+L+E+LK+  +   A G+ 
Sbjct: 1888 HSGGRHATALTAD-GKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSS 1944

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    VVQ+A G      LA 
Sbjct: 1945 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLVGHRVVQVACGSRDAQTLAL 2003

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2004 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2059

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2060 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 2117



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H+ A+T+ G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 1889 SGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAA 1948

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            ++ +G++Y +G   +G   +G   T+L   P++V+ L    VVQ A G  +  T  L+ E
Sbjct: 1949 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLVGHRVVQVACGSRDAQTLALTDE 2006

Query: 168  GRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 2007 GLVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2058

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHGS    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 2059 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 2115

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 2116 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2152



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 8/220 (3%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA   R       G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+
Sbjct: 1929 EALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRV 1988

Query: 98   IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +Q A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +E L    V Q  
Sbjct: 1989 VQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNIERLNGQGVCQIE 2046

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + L
Sbjct: 2047 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCL 2105

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
            A+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 2106 AVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2142



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +   Q+  G   L A+   
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTP-CEALAALRPAQLIGGEQTLFAVT-- 2837

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 2838 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2896

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  G +Y++G G  
Sbjct: 2897 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRY 2956

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LTE   ++
Sbjct: 2957 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTEDDTVW 3003

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 3004 SWGDGDYGKLG 3014


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 23/359 (6%)

Query: 55   SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
            +++    G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2223

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
            ++YA G  +      G+ GT+ V++P L+ES++++FV + A+  G      LS EG VY+
Sbjct: 2224 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYS 2281

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            +    D +LGH        P  ++ +L  I VV IAAG  +    AC      +YS G G
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPR-VVESLRGIEVVDIAAGGAHS---ACITVAGDLYSWGKG 2337

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              G+LGHG   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG
Sbjct: 2338 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2397

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  +   VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +     
Sbjct: 2398 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 2452

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 2453 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 2501



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 18/364 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + +
Sbjct: 2199 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFV 2258

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P++VESL+ I VV  A
Sbjct: 2259 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGIEVVDIA 2316

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +Y++  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 2317 AGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 2375

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 2376 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 2432

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 2433 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 2492

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 2493 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--N 2542

Query: 396  SGKL 399
            +GKL
Sbjct: 2543 AGKL 2546



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 39/331 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P     L  + + Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDTLG--------------PQLV 192

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
           + L  +NI  V A         L+  G V+++  G+  RLGH       EP     L G 
Sbjct: 193 QGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 252

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 253 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 309

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 310 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 369

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++VV +
Sbjct: 370 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVVDV 419

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 420 AAGST-----HCLALTEDSEVHSWGSNDQCQ 445



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 147/282 (52%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVY  ++ +D  LG            L+
Sbjct: 144 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDT-LGPQ----------LV 192

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V++AA   G+ Y LALA       V+S GCG GG+LGHG     + P++I  
Sbjct: 193 QGLASRNIVKVAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKMISA 248

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 249 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 308

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 309 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 360

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 361 DLD--IVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 395



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 28/301 (9%)

Query: 115  QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
            +V+ +G   KD  G    G++G+K +  P   E+L  + VVQ A G+     ++ EG+VY
Sbjct: 1150 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 1204

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
                  + RLG       V     +  L N  V ++A       A+A    G  V+S G 
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 1263

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  GKLGH SR +   PRLIE  +   ++ +  A G+ H+A +   G + TWG G YG L
Sbjct: 1264 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAAITSSGELYTWGLGEYGRL 1321

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            GHG+   +  PK+V+ L   + I VA G  D  T  ++++G V+S+G G+   LG     
Sbjct: 1322 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--- 1378

Query: 350  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               G+   NV  PQ +  L    + V QI           + ALT+SG ++ +G GD G+
Sbjct: 1379 ---GSEGCNV--PQNIERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWGRGDFGE 1426

Query: 410  L 410
            L
Sbjct: 1427 L 1427



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 264 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 323

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ +V+   G+ F+  L+++G
Sbjct: 324 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 381

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   VV +AAG  + LAL
Sbjct: 382 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVVDVAAGSTHCLAL 429



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 11/291 (3%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 1144 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 1203

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++ 
Sbjct: 1204 YACGEATNGRLGLGIS-SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1262

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  
Sbjct: 1263 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEY 1318

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 1319 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1376

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
             G  E  +VP+ ++ LN      +  G   +  +++ G V+++G G+   L
Sbjct: 1377 RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 270

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 271 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 328

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 329 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 384

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + V VAAG+ H   + +D  V +WG   
Sbjct: 385 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVVDVAAGSTHCLALTEDSEVHSWG--- 439

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 440 ------SNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSFAWS 482



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 169  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 1148 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 1204

Query: 228  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1264

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 1265 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 1323

Query: 347  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 1324 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 1371

Query: 407  KGQLG 411
             G+LG
Sbjct: 1372 FGKLG 1376



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 1183 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAV 1242

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G  + G         P+L+E+LK   +   A G+  
Sbjct: 1243 HSGGRHAMALTVDGKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1300

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 1301 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 1359

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 1360 DEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 1415

Query: 280  VCTWGWGRYGCL 291
            V TWG G +G L
Sbjct: 1416 VWTWGRGDFGEL 1427



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + I++   G+  ++ 
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   VV  A G+     L+ +  
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 435 VH--SWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACG 474



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 17/122 (13%)

Query: 302 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           P++VQ L     + VA  +  +    ++  G+V+S+GCG+   LGH      +       
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 241

Query: 360 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
             P+++++L  KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +
Sbjct: 242 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 295

Query: 418 QT 419
           QT
Sbjct: 296 QT 297


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV IAAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGH 4130

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  V  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4191 KVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4242

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4243 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 26/357 (7%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+VYA
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G
Sbjct: 3020 CGEATNGRLGLGL-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+
Sbjct: 3079 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 3134

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH         
Sbjct: 3193 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT------- 3245

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  PQ+V  L+   ++++ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3246 -DVHVRKPQVVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3294



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 4111 ITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGVGVVKVECGSQFSVALT--KSG-AVY 4224

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4322



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D  G              PQLV+SL  +
Sbjct: 449 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDILG--------------PQLVQSLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G V+++  G+  RLGH       EP     L G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V+ G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   E+V+ +     +
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GEKVIDV-----V 716

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
             + H  ALTE  ++Y++G+ D+ Q
Sbjct: 717 AGSTHCLALTEDSEVYSWGSNDQCQ 741



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 152/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V+ P   E L ++ V Q A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDI-LGPQ----------LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            +L +  +V+IAA   G+ Y LALA   +   V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++S  +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--IVKVSCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 166/339 (48%), Gaps = 18/339 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4103 AGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  +  V V  G+  +  + 
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGVGVVKVECGSQFSVALT 4218

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            G  +   LG     DG  N    +  P+LV +L  K++N
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4309



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 22/354 (6%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAV 3056

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +Y++  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 3115 SAAITSSGELYSWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V TWG G Y  LGHG +     P+VV+ L   K IHVA G      V++ G VY++G  +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDND 3289

Query: 340  SASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
                        QGN    V   P LV  L+      V    ++S+ W     A
Sbjct: 3290 HGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWTTMDVA 3334



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 114/182 (62%), Gaps = 8/182 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ +V+ + G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +VY++  G++ RLGH TE +   P  LL  L+   V+ + AG  + LAL        VYS
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGEKVIDVVAGSTHCLALT---EDSEVYS 733

Query: 229 VG 230
            G
Sbjct: 734 WG 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V+++ G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVSCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + V AG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GEKVIDVVAGSTHCLALTEDSEVYSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSFAWS 778



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4006

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD+Y++G G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4127 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4173

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4174 WGDGDYGKLG 4183



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + I++ + G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+    G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           VY  SWG++ +  H       +P P  L  L++  +V IA G
Sbjct: 731 VY--SWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACG 770



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +II  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3261 KKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318

Query: 155  AIGN 158
            A G+
Sbjct: 3319 ACGS 3322



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 17/122 (13%)

Query: 302 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           P++VQ+L     + +A  +  +    ++  G+V+S+GCG+   LGH      +       
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 537

Query: 360 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
             P+++++L  KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +
Sbjct: 538 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 591

Query: 418 QT 419
           QT
Sbjct: 592 QT 593


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R IQ   G      ++  G++YA G 
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3766 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3823

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV IAAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3824 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGH 3879

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3880 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3939

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3940 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3991

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3992 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4036



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2702 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2761

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G++
Sbjct: 2762 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 2820

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 2876

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH   
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 2993

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 2994 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3039

Query: 409  QLG 411
            Q G
Sbjct: 3040 QQG 3042



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 164/330 (49%), Gaps = 18/330 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I + A  +G 
Sbjct: 3743 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3802

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A G   +A +
Sbjct: 3803 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACI 3860

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G      L C     
Sbjct: 3861 TAAGDLYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQTL-CLTDDD 3918

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG
Sbjct: 3919 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3976

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++G  +   LG
Sbjct: 3977 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4036

Query: 345  HNAIADGQGNRHANVLTPQLVTSL--KQVN 372
                 DG  N    +  P+LV +L  K++N
Sbjct: 4037 -----DGTTN---AIQRPRLVAALQGKKIN 4058



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 3800 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 3859

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG +Y +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 3860 ITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 3917

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 3918 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3973

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 3974 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4031

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4032 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4071



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2745 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 2804

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+++++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 2805 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 2862

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 2863 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 2921

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 2922 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2977

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2978 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3034



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2918

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG+   G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2919 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH T+ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 2977 VVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYA 3032

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3059



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  +Q+  G   L A+    
Sbjct: 3700 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPIQLIGGEQTLFAVT--- 3755

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3756 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3815

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD+Y++G G   
Sbjct: 3816 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 3875

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 3876 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 3922

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 3923 WGDGDYGKLG 3932



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 2954 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3008

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3009 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3066

Query: 155  AIGN 158
            A G+
Sbjct: 3067 ACGS 3070



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 34/172 (19%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ + Q A       +LSR GRVY  ++ +D  +G              
Sbjct: 354 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVG-------------- 399

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
                     + A +  +           V+S G G  GKLG G     K P+LIE+ Q 
Sbjct: 400 ----------VVAVFSLIFG--------QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 441

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           L++  V V  G+  +  + +DG+V +WG G    LGHG EE    PK+++ L
Sbjct: 442 LDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 22/134 (16%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKD-----------------SFGEAEYGVQ 132
           L  + I Q A    R +++S  G+VY  A+  D                 S+G+ +YG  
Sbjct: 363 LANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKL 422

Query: 133 G---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
           G   +    +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE + 
Sbjct: 423 GRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 482

Query: 190 VEPHPLLGTLENIP 203
             P  L G    +P
Sbjct: 483 RYPKLLEGLQATLP 496



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 41/68 (60%)

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G+V +WG G YG LG G  +    PK+++ L D+  + V  G   +  +++DG VYS+G 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 338 GESASLGH 345
           G++  LGH
Sbjct: 469 GDNQRLGH 476



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 32  RFLLA---GEACCRRENSQAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEWRP 86
           RFL+    G    +  NS  + G    +AV S   G V+S+G    G+LG G ++    P
Sbjct: 377 RFLILSRNGRVYMQAYNSDTLVG---VVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTP 433

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           + I  LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E L
Sbjct: 434 KLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGL 491

Query: 147 K 147
           +
Sbjct: 492 Q 492


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 151/288 (52%), Gaps = 10/288 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VYS+G    G+LGHG + + + P+PI++L G+RI Q A G    + ++  G+V ++G++ 
Sbjct: 90  VYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQ 149

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G+   G     LV  PQ +++ + + V   A G   TA ++ +G +Y + WG    LG 
Sbjct: 150 NGQLGLGTTEDSLV--PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 207

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
               + + P  +  T+E + +V++A G+ + ++++   S   +Y+ G    G+LGHG   
Sbjct: 208 GDRNDRLVPEKV-STVEGVKMVKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFE 263

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
           D   P  +E  Q   +  +   +G W H   +  DG++  WGW ++G +G G+      P
Sbjct: 264 DHLTPHKLEALQENLISEI---SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSP 320

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
             V+  ++ K +H++ G   T  V+E  +V+S+G G +  LGH    D
Sbjct: 321 VQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 368



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 159/326 (48%), Gaps = 29/326 (8%)

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           P+R     R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L 
Sbjct: 14  PVR-----RVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALD 66

Query: 148 NIFVVQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
              VV    G   T   S    +VY++ WG+  RLGH    +   P P+   L  + + Q
Sbjct: 67  GHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHGLRIKQ 125

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           IA G  + LA+        V S G    G+LG G+  D   P+ I+ FQ ++++  +VAA
Sbjct: 126 IACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAA 180

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           GA H A V +DG +  WGWGRYG LG G+     VP+ V  +  VK + VA G   T  V
Sbjct: 181 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV 240

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G +Y++G  +   LGH    D         LTP  + +L++    + +IS      W
Sbjct: 241 SSSGGLYTYGWSKYGQLGHGDFEDH--------LTPHKLEALQE--NLISEISGG----W 286

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGI 412
             HT ALT  GKLY +G    GQ+G+
Sbjct: 287 R-HTMALTSDGKLYGWGWNKFGQVGV 311



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 27/381 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  VV S+G    GQLGHG  E+   P  + +L G  ++    GA  T  
Sbjct: 23  AGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82

Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  QVY++G   FG   +G   + L T PQ +++L  + + Q A G+     ++ +G
Sbjct: 83  YSESFTQVYSWGWGDFGRLGHG-NSSDLFT-PQPIKALHGLRIKQIACGDSHCLAVTMDG 140

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    + + V  +AAG  +  A+        +Y 
Sbjct: 141 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVSVKMVAAGAEHTAAVTEDGE---LYG 196

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +   + + +  V VA G  H   V   G + T+GW +Y
Sbjct: 197 WGWGRYGNLGLGDRNDRLVPEKVSTVEGVKM--VKVACGWRHTISVSSSGGLYTYGWSKY 254

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E    P  ++AL +     ++ G   T  ++ DG +Y +G  +   +G   +
Sbjct: 255 GQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVG---V 311

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D     + +  +P  V    +  ++VV IS      W  HT A+TE   ++++G G  G
Sbjct: 312 GD-----NVDHCSPVQVKFPHE--QKVVHISCG----WR-HTLAVTERQNVFSWGRGTNG 359

Query: 409 QLGIELVNNQTERGNPERVDI 429
           QLG        +R  P+ +++
Sbjct: 360 QLGH---GESIDRNIPKMIEV 377



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V S+G N +GQLG GTTE+   P+ I++ QG+ +   AAGA  
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEH 184

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G++Y +G   +G    G +  +LV  P+ V +++ + +V+ A G   T  +S 
Sbjct: 185 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSS 242

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L    EN+ + +I+ G+ + +AL    S   +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENL-ISEISGGWRHTMALT---SDGKL 298

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +  + Q VV  +  W H   V +   V +WG 
Sbjct: 299 YGWGWNKFGQVGVGDNVDHCSPV---QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 355

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG     ++PK+++ L+
Sbjct: 356 GTNGQLGHGESIDRNIPKMIEVLS 379


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 19/325 (5%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  I G  H+ A + + + +YS+G    G+LGHG + + + P+PI +LQGI+I Q A G 
Sbjct: 76  SVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGD 135

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++DAGQV+++G++  G  + G+  T+    PQ + + + + V   A G   TA +
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNG--QLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAI 193

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +G +Y + WG    LG     + + P   + ++E   +V +A G+ + + ++   S  
Sbjct: 194 LEDGDLYGWGWGQYGNLGLGDRNDRLVPEK-VSSVEGEKMVLVACGWRHTVTVS---SSG 249

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
            +Y+ G    G+LGHG   D   P  +E  +   +  +   AG W H   V  DG++  W
Sbjct: 250 DLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQI---AGGWRHTMAVAGDGKLYGW 306

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G  +      P  V   ++ K   VA G   T  ++E+ +V+S+G G S  L
Sbjct: 307 GWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQL 366

Query: 344 GHNAIADGQGNRHANVLTPQLVTSL 368
           GH  I D          TP+++ +L
Sbjct: 367 GHGEIIDRN--------TPKMIDAL 383



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 180/384 (46%), Gaps = 34/384 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA----GAG 105
           AG  HS+A+ S   V S+G    GQLGHG  E+  RP P   L G  +   A+    GA 
Sbjct: 27  AGANHSVALLSSKAVCSWGRGEDGQLGHGDAED--RPVPTL-LSGFDVPGIASVVICGAD 83

Query: 106 RTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            T   SD   Q+Y++G   FG   +G   +  V  PQ +E+L+ I + Q A G+     +
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHG--NSSDVFHPQPIEALQGIKIKQIACGDSHCLAV 141

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G+V+++    + +LG     + + P  +    E + V  IAAG  +  A+       
Sbjct: 142 TDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIH-AFEGVCVKMIAAGAEHTAAILEDGD-- 198

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y  G G  G LG G R D   P  +   +   +  V+VA G  H   V   G + T+G
Sbjct: 199 -LYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKM--VLVACGWRHTVTVSSSGDLYTYG 255

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           W +YG LGHG+ E   VP  ++AL D     +A G   T  V+ DG +Y +G  +   +G
Sbjct: 256 WSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVG 315

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
              +AD       NV     V  +    ++V Q++      W  HT ALTE+  ++++G 
Sbjct: 316 ---VAD-------NVDHCSPVQVIFPDEQKVAQVACG----WR-HTLALTENKNVFSWGR 360

Query: 405 GDKGQLGIELVNNQTERGNPERVD 428
           G  GQLG   +    +R  P+ +D
Sbjct: 361 GTSGQLGHGEI---IDRNTPKMID 381



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 25/314 (7%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GN 158
           +AGA  ++ +  +  V ++G+   G+  +G    + V  P L+       +    I   +
Sbjct: 26  SAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVICGAD 83

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             TA    + ++Y++ WG+  RLGH    +   P P+   L+ I + QIA G  + LA+ 
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIE-ALQGIKIKQIACGDSHCLAVT 142

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                  V+S G    G+LG G+  D   P+ I  F+ + ++  ++AAGA H A + +DG
Sbjct: 143 ---DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVK--MIAAGAEHTAAILEDG 197

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            +  WGWG+YG LG G+     VP+ V ++   K + VA G   T  VS  GD+Y++G  
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWS 257

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
           +   LGH    D         L P  + +LK  +  + QI+      W  HT A+   GK
Sbjct: 258 KYGQLGHGDFEDH--------LVPHKLEALK--DRFISQIAGG----WR-HTMAVAGDGK 302

Query: 399 LYAFGAGDKGQLGI 412
           LY +G    GQ+G+
Sbjct: 303 LYGWGWNKFGQVGV 316



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V+S+G N +GQLG G TE+   P+ I + +G+ +   AAGA  
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEH 189

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  I + G +Y +G   +G    G +  +LV  P+ V S++   +V  A G   T  +S 
Sbjct: 190 TAAILEDGDLYGWGWGQYGNLGLGDRNDRLV--PEKVSSVEGEKMVLVACGWRHTVTVSS 247

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L++  + QIA G+ + +A+A       +
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDRFISQIAGGWRHTMAVAGDGK---L 303

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G     D   P    Q    + Q V   A  W H   + ++  V +WG 
Sbjct: 304 YGWGWNKFGQVGVADNVDHCSPV---QVIFPDEQKVAQVACGWRHTLALTENKNVFSWGR 360

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG     + PK++ AL+
Sbjct: 361 GTSGQLGHGEIIDRNTPKMIDALS 384



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 21/224 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  ++AG  + +AL    S  AV S G G  G+LGHG   D   P L+  F +  +  VV
Sbjct: 22  VALVSAGANHSVALL---SSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV 78

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           +       A   +  ++ +WGWG +G LGHGN      P+ ++AL  +K   +A GD   
Sbjct: 79  ICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC 138

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             V++ G V+S+G  ++  LG     D         L PQ + + + V  +++       
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDS--------LLPQKIHAFEGVCVKMIAAGAE-- 188

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                HT A+ E G LY +G G  G LG+    ++ +R  PE+V
Sbjct: 189 -----HTAAILEDGDLYGWGWGQYGNLGL---GDRNDRLVPEKV 224


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 176/364 (48%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G+ II    GA  T  
Sbjct: 25  AGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTS 84

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  +VY++G   FG   +G   + L T PQ +++L ++ + Q A G+     ++ +G
Sbjct: 85  YSESRMEVYSWGWGDFGRLGHG-NSSDLFT-PQPIKALHSLKIRQIACGDSHCLAVTMDG 142

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    + + +  +AAG  +  A+        +Y 
Sbjct: 143 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVSIKMVAAGAEHTAAVTEDGE---LYG 198

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 287
            G G  G LG G R D   P   E+  L+N   +++ A  W H   V   G + T+GW +
Sbjct: 199 WGWGRYGNLGLGDRNDRLVP---EKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSK 255

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LGHG+ E    P  V+AL D     ++ G   T  ++ DG++Y +G  +    G   
Sbjct: 256 YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNK---FGQVG 312

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           + D     + +  +P  V    +    +VQIS      W  HT A+TE   ++++G G  
Sbjct: 313 VGD-----NIDHCSPVQVKFPHEQAHSLVQISCG----WR-HTLAITERQNVFSWGRGTN 362

Query: 408 GQLG 411
           GQLG
Sbjct: 363 GQLG 366



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 159/327 (48%), Gaps = 31/327 (9%)

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           PIR     ++I  +AGA  ++ +     V ++G+   G+  +G    +   +P  + +L 
Sbjct: 16  PIR-----QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR--PTPTQLSTLD 68

Query: 148 NIFVVQAAIGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
            + ++    G   T   S E R  VY++ WG+  RLGH    +   P P+   L ++ + 
Sbjct: 69  GLDIISITCGADHTTSYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHSLKIR 126

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           QIA G  + LA+        V S G    G+LG G+  D   P+ I+ FQ ++++  +VA
Sbjct: 127 QIACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIK--MVA 181

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
           AGA H A V +DG +  WGWGRYG LG G+     VP+ V  +N  K I VA G   T  
Sbjct: 182 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTIS 241

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           VS  G +Y++G  +   LGH    D         LTP  V +L     R   IS+ +  +
Sbjct: 242 VSSSGGLYTYGWSKYGQLGHGDFEDH--------LTPHKVEAL-----RDSYISMISGGW 288

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGI 412
              HT ALT  G LY +G    GQ+G+
Sbjct: 289 --RHTMALTSDGNLYGWGWNKFGQVGV 313



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 169/359 (47%), Gaps = 16/359 (4%)

Query: 51  GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+ + + S+  VYS+G    G+LGHG + + + P+PI++L  ++I Q A G    + 
Sbjct: 78  GADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLA 137

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G+V ++G++  G+   G     LV  PQ +++ + + +   A G   TA ++ +G 
Sbjct: 138 VTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQAFQGVSIKMVAAGAEHTAAVTEDGE 195

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +Y + WG    LG     + + P   +  +    ++ +A G+ + ++++   S   +Y+ 
Sbjct: 196 LYGWGWGRYGNLGLGDRNDRLVPEK-VSLVNGDKMIMVACGWRHTISVS---SSGGLYTY 251

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
           G    G+LGHG   D   P  +E    L    + + +G W H   +  DG +  WGW ++
Sbjct: 252 GWSKYGQLGHGDFEDHLTPHKVEA---LRDSYISMISGGWRHTMALTSDGNLYGWGWNKF 308

Query: 289 GCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           G +G G+  + C  V            + ++ G   T  ++E  +V+S+G G +  LGH 
Sbjct: 309 GQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHG 368

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT--ESGKLYAFG 403
              D    +   VL+    +   Q+    V  SL  S    +  +A+   ESG+  + G
Sbjct: 369 ESMDRNLPKIIEVLSAD-GSGGHQIEASTVDPSLGKSWVSPSDRYAIVPDESGQAVSVG 426



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 6/263 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V S+G N +GQLG GTTE+   P+ I++ QG+ I   AAGA  
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEH 186

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G++Y +G   +G    G +  +LV  P+ V  +    ++  A G   T  +S 
Sbjct: 187 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSLVNGDKMIMVACGWRHTISVSS 244

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH +   L +  +  I+ G+ + +AL    +   +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVE-ALRDSYISMISGGWRHTMALTSDGN---L 300

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y  G    G++G G   D   P  ++         V ++ G  H   + +   V +WG G
Sbjct: 301 YGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRG 360

Query: 287 RYGCLGHGNEECESVPKVVQALN 309
             G LGHG     ++PK+++ L+
Sbjct: 361 TNGQLGHGESMDRNLPKIIEVLS 383


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 183/381 (48%), Gaps = 29/381 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S  VV S+G    GQLGHG T++   P  + +L    I   A GA  T+ 
Sbjct: 21  AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLA 80

Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  ++Y++G   FG   +G     L+  PQ + +L+ + + Q A G+     ++ EG
Sbjct: 81  YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 138

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    + +P+  +AAG  + +A+        +Y 
Sbjct: 139 EVQSWGRNQNGQLGLGNTEDSLVPQKIQ-AFKGVPIKMVAAGAEHSVAIT---ENGELYG 194

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D  +P  +       +  V+VA G  H   V   G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRWNPEKVSSVDCDKM--VMVACGWRHTISVSSSGGIYTYGWSKY 252

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHGN E   VP+ +QAL+D     V+ G   +  ++  G ++ +G  +    G   +
Sbjct: 253 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNK---FGQVGV 309

Query: 349 ADGQGN-RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            D   +     V  PQ        ++RVVQIS      W  HT A+TE   ++++G G  
Sbjct: 310 GDNLDHCSPVQVKFPQ--------DQRVVQISCG----WR-HTIAVTEKENVFSWGRGTN 356

Query: 408 GQLGIELVNNQTERGNPERVD 428
           GQLG     +  +R +P+ ++
Sbjct: 357 GQLG---HGDTIDRNSPKIIE 374



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 157/318 (49%), Gaps = 24/318 (7%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R++  +AGA  T+ +     V ++G+   G+  +G    + +  P  + +L    +   A
Sbjct: 15  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSIA 72

Query: 156 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S     +Y++ WG+  RLGH    + + P P++  L+ + + QIA G  + 
Sbjct: 73  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 131

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G+  D   P+ I+ F+ + ++  +VAAGA H+  +
Sbjct: 132 LAVTMEGE---VQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIK--MVAAGAEHSVAI 186

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            ++G +  WGWGRYG LG G+      P+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH    D         L PQ + +L   ++ + Q+S      W  H+ ALT
Sbjct: 247 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 291

Query: 395 ESGKLYAFGAGDKGQLGI 412
            +G L+ +G    GQ+G+
Sbjct: 292 STGLLFGWGWNKFGQVGV 309



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +G+ I   AAGA  
Sbjct: 123 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEH 182

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I++ G++Y +G   +G    G +  +   +P+ V S+    +V  A G   T  +S 
Sbjct: 183 SVAITENGELYGWGWGRYGNLGLGDRNDRW--NPEKVSSVDCDKMVMVACGWRHTISVSS 240

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + P  L   L +  + Q++ G+ + +AL    S   +
Sbjct: 241 SGGIYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 296

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           +  G    G++G G   D   P    Q +    Q VV  +  W H   V +   V +WG 
Sbjct: 297 FGWGWNKFGQVGVGDNLDHCSPV---QVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGR 353

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG+    + PK+++AL+
Sbjct: 354 GTNGQLGHGDTIDRNSPKIIEALS 377



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 26/226 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV- 262
           V+ I+AG  + +AL    SG  V S G G  G+LGHG   D   P    Q   L+ Q + 
Sbjct: 16  VLLISAGASHTVALL---SGNVVCSWGRGEDGQLGHGDTDDRPLP---TQLSALDAQHID 69

Query: 263 VVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            +A GA H     +    + +WGWG +G LGHGN     +P+ + AL  ++   +A GD 
Sbjct: 70  SIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDS 129

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
               V+ +G+V S+G  ++  LG     D         L PQ + + K V  ++V     
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDS--------LVPQKIQAFKGVPIKMVAAGA- 180

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                  H+ A+TE+G+LY +G G  G LG+    ++ +R NPE+V
Sbjct: 181 ------EHSVAITENGELYGWGWGRYGNLGL---GDRNDRWNPEKV 217



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           +A   +  SQ   G  HS+A+TS G+++ +G N  GQ+G G   +   P  ++  Q  R+
Sbjct: 270 QALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRV 329

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+++G+ + G+  +G   T    SP+++E+L
Sbjct: 330 VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG--DTIDRNSPKIIEAL 376


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 173/372 (46%), Gaps = 25/372 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ +  V+ ++G    GQLGHG  E+   P  I       I     GA  T  
Sbjct: 21  AGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTA 80

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  QVY++G   FG   +G   +  V +PQ V++L+ I + Q A G+     ++  G
Sbjct: 81  YSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAG 138

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    E I V  IAAG  +  A+        +Y 
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISVKMIAAGAEHTAAVTEDGD---IYG 194

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +   +   +  V+VA G  H   V   G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLVACGWRHTITVSSSGSLYTYGWSKY 252

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP  V+AL D     ++ G   T  ++ DG +Y +G  +   +G    
Sbjct: 253 GQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG---- 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                  +A+  +P  V   ++  ++V Q++      W  HT A TE   ++A+G G  G
Sbjct: 309 ----AGDNADHCSPAQVNFPEE--QKVAQVACG----WR-HTLAFTEKKNVFAWGRGTSG 357

Query: 409 QLGI-ELVNNQT 419
           QLG  E+V+  T
Sbjct: 358 QLGHGEIVDRNT 369



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 152/316 (48%), Gaps = 24/316 (7%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ +     +  +G+   G+  +G    +LV  P ++       +     
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73

Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + Q+A G  + L
Sbjct: 74  GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A+        V S G    G+LG G+  D   P+ I+ F+ ++++  ++AAGA H A V 
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG +  WGWGRYG LG G+     VP+ V ++   K + VA G   T  VS  G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P  V +LK  +    QIS      W  HT ALT 
Sbjct: 248 GWSKYGQLGHGDFEDH--------LVPHKVEALK--DSSTSQISGG----WR-HTMALTS 292

Query: 396 SGKLYAFGAGDKGQLG 411
            GKLY +G    GQ+G
Sbjct: 293 DGKLYGWGWNKFGQVG 308



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V S+G N +GQLG GTTE+   P+ I++ +GI +   AAGA  
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  + V  P+ V S++   +V  A G   T  +S 
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSS 240

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH +   L++    QI+ G+ + +AL    S   +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 296

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q      Q V   A  W H     +   V  WG 
Sbjct: 297 YGWGWNKFGQVGAGDNADHCSP---AQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGR 353

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG     + P ++ AL+
Sbjct: 354 GTSGQLGHGEIVDRNTPVIIDALS 377


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 173/357 (48%), Gaps = 23/357 (6%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 20  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 79

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
            + G     + GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 80  GAGGRLG--IGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 137

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 138 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 193

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
               D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 194 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 253

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 305

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
             P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG    N
Sbjct: 306 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLGDGTTN 355



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 16/343 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
           Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I + A  +G 
Sbjct: 57  QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 116

Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A G   +A +
Sbjct: 117 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 174

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G      L C     
Sbjct: 175 TAAGDLYTWGKGRYGRLGHSDSEDQLKP-KLVEALQGHRVVDIACGSGDAQTL-CLTDDD 232

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG
Sbjct: 233 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 290

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++G  +   LG
Sbjct: 291 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 350

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
                DG  N    +  P+LV +L+      V     +++ W+
Sbjct: 351 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS 385



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 19/247 (7%)

Query: 167 EGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G    + WG++ R  LG         P P    L  +  VQ+  G   L A+       
Sbjct: 17  QGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE-ALATLRPVQLIGGEQTLFAVTADGK-- 73

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V +WG
Sbjct: 74  -LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 132

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G    LG
Sbjct: 133 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 192

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++++G 
Sbjct: 193 HSDSED--------QLKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWSWGD 239

Query: 405 GDKGQLG 411
           GD G+LG
Sbjct: 240 GDYGKLG 246


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 82  YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E IP+  +AAG  +  A+        +Y 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIPIKMVAAGAEHTAAVTEDGD---LYG 195

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G RTD   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358

Query: 409 QLGI 412
           QLGI
Sbjct: 359 QLGI 362



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73

Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 74  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIK--MVAAGAEHTAAV 187

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 248 YGWSKYGQLGHGDLEDH--------LIPHKLEALS--NSFISQISGG----WR-HTMALT 292

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GI I   AAGA  
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEH 183

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 171/348 (49%), Gaps = 20/348 (5%)

Query: 44   ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQA 100
            +  Q + G   S  + S GVV + G    G+LG G +++ + P  I + QG    +++ +
Sbjct: 3051 QTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTS 3110

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                G +M +++ G+V+++G   FG+  +G    +    P+ +E+L+   VVQ A G   
Sbjct: 3111 CGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQIEALQGEDVVQLACGFRH 3168

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +AV++ +G+++TF  G   RLG  +  N + P   +  LE   V Q++ G  + L L+  
Sbjct: 3169 SAVVTADGKLFTFGSGESGRLGQRSTSNKMLPE-RVAALEGYHVGQVSCGLNHTLVLSLD 3227

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
              GMAV++ G G  GKLG GS T + +P+ +EQ  L N     V  GA  + VV  DG V
Sbjct: 3228 --GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVVACDGHV 3283

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             T+G  R   L     +  S P+VV +L  +    +A G      +S  GDVY++GC   
Sbjct: 3284 YTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSE 3343

Query: 341  ASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWN 387
              LG           H N V  P L+T+L+  N + +     +S  W 
Sbjct: 3344 GQLGLG---------HCNPVKEPTLITALQGKNIKQISAGRCHSSAWT 3382



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 32/374 (8%)

Query: 41  CRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 99
           C   +S   A PG    AVT    VY +GSNSS QL  GT E+   P+  +     + I+
Sbjct: 363 CLCSSSTDAASPGTEGDAVT----VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIE 418

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-N 158
           A  G   T  +S  G V A GK S+G    G    + +    ++E  +NI  V ++ G +
Sbjct: 419 A--GQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  ++ +G V+++  G   +LGH        P  + G L +  VV  +AGY +  A+ 
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVT 536

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                  +Y+ G G  G+LGH        P L++    +      VA G+ H   V QDG
Sbjct: 537 ---KDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG----QVACGSSHTIAVAQDG 589

Query: 279 R-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           R V ++G G  G LGHG+      PKV++AL+      V  G  ++  ++  G V+++GC
Sbjct: 590 RTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC 649

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G            G G+     L P+ V  L     +++ IS  +S     H  AL+   
Sbjct: 650 GSCL---------GCGSSETTSLRPRFVEDLSIT--KIIDISCGDS-----HCLALSHEN 693

Query: 398 KLYAFGAGDKGQLG 411
           ++YA+G    GQ G
Sbjct: 694 EVYAWGNNTMGQCG 707



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 183/352 (51%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLQGIRIIQAA 101
           ++Q I AG   + +V++ G V + G  S G+LG G +  +  P+ +     + I+ + ++
Sbjct: 413 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSS 472

Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
            G+ G T+ I+  G+V+++G   +G+  +G   T+    P++++  L +  VV A+ G  
Sbjct: 473 KGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIIQGPLFSKIVVSASAGYR 530

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALA 218
            +A ++++G +YT+  G+  RLGH    +D +   +   +++I  V Q+A G  + +A+A
Sbjct: 531 HSAAVTKDGELYTWGEGDFGRLGH----SDSQSRNMPTLVKDISGVGQVACGSSHTIAVA 586

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
               G  V+S G G  GKLGHG       P++IE      ++ V   AG+  +  +   G
Sbjct: 587 --QDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTSAG 642

Query: 279 RVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           +V  WG G   CLG G+ E  S+ P+ V+ L+  K I ++ GD     +S + +VY++G 
Sbjct: 643 QVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWG- 699

Query: 338 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
                  +N +   GQG+    +  P+ V  L+ V+ + +    ++S+ W A
Sbjct: 700 -------NNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTA 744



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 41/271 (15%)

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------- 219
            G+   + WGN  R G            L GT  N+ V  +A        + C        
Sbjct: 3018 GKSDVYLWGN-GRYGQ-----------LAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLI 3065

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDG 278
            Q +G+ V +VG G  G+LG G+  D   P +I  FQ   +  +V + G+  H+  + + G
Sbjct: 3066 QSNGV-VTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3124

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
             V +WG G +G LGHGN E +  PK ++AL     + +A G   + VV+ DG +++FG G
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184

Query: 339  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG- 397
            ES  LG  +         +N + P+ V +L+  +   V   L        HT  L+  G 
Sbjct: 3185 ESGRLGQRST--------SNKMLPERVAALEGYHVGQVSCGLN-------HTLVLSLDGM 3229

Query: 398  KLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             ++AFG GD G+LG     + T +  P++V+
Sbjct: 3230 AVWAFGDGDYGKLG---AGSSTAKYYPQKVE 3257



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 16/183 (8%)

Query: 47  QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H+IAV   G  V+SFG   +G+LGHG T   +RP+ I +L G  I +  AG+ 
Sbjct: 574 QVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 633

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 163
            ++ ++ AGQV+A+G  S         G+   TS  P+ VE L    ++  + G+     
Sbjct: 634 SSLALTSAGQVFAWGCGSCLGC-----GSSETTSLRPRFVEDLSITKIIDISCGDSHCLA 688

Query: 164 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           LS E  VY  +WGN+  +G     HT      P  +LG LE + + QI AG  + LA   
Sbjct: 689 LSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-LEGVSIQQITAGTSHSLAWTA 744

Query: 220 QPS 222
            P+
Sbjct: 745 VPT 747



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 30/356 (8%)

Query: 61   KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            K  VY +G+   GQL  GT      P    SL   +  Q   G   + LI   G V A G
Sbjct: 3019 KSDVYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQTQ--QVVCGQNCSFLIQSNGVVTAVG 3075

Query: 121  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGN 177
            +  +G    G      V  P ++ + +   V Q       +  +  L+  G V+++  G+
Sbjct: 3076 EGQYGRLGQGNSDDLYV--PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3133

Query: 178  DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
              +LGH        P  +   L+   VVQ+A G+ +    A   +   +++ G G  G+L
Sbjct: 3134 FGKLGHGNNERQRRPKQI-EALQGEDVVQLACGFRHS---AVVTADGKLFTFGSGESGRL 3189

Query: 238  GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNE 296
            G  S +++  P  +   +  ++  V  + G  H  V+  DG  V  +G G YG LG G+ 
Sbjct: 3190 GQRSTSNKMLPERVAALEGYHVGQV--SCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247

Query: 297  ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              +  P+ V+ L +     V  G   + VV+ DG VY+FG  +   +G   + D      
Sbjct: 3248 TAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG--QERLIG---LPDSMLKNR 3302

Query: 357  ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            +N   PQ+V SL+ +    + +          H  AL+ +G +YA+G   +GQLG+
Sbjct: 3303 SN---PQVVPSLEGLFIEDIAVGC-------EHVLALSSTGDVYAWGCNSEGQLGL 3348



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 21/168 (12%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            E  C +   +   G   S+ V   G VY+FG      L     +    P+ + SL+G+ I
Sbjct: 3257 EQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFI 3316

Query: 98   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAA 155
               A G    + +S  G VYA+G +S  E + G+     V  P L+ +L  KNI  + A 
Sbjct: 3317 EDIAVGCEHVLALSSTGDVYAWGCNS--EGQLGLGHCNPVKEPTLITALQGKNIKQISA- 3373

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
                        GR ++ +W   +   +   P +++    LG  +++P
Sbjct: 3374 ------------GRCHSSAWTTPSTSKNSGGPGNLQ----LGLPQSVP 3405


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3649

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V+SP L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3650 GA--GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3707

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH +      P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3708 KLGHGSRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3763

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3764 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3823

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3824 KVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3875

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3876 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3920



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3618 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFI 3677

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3678 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGIEVVDVA 3735

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 3736 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3794

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 3795 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKID--SLTGLGVVKVECGSQFSVALT 3851

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3852 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3911

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 3912 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPTS 3961

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 3962 AGKLPA 3967



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 128 VIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDT----------LAPQ-LV 176

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P+ I  
Sbjct: 177 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKAISA 232

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 233 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 292

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 293 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 344

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 345 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 379



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 26/357 (7%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+VYA
Sbjct: 2594 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2653

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G
Sbjct: 2654 CGEATNGRLGLGL-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+
Sbjct: 2713 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 2768

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 2769 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  +VP+ ++ LN      +  G   +  +++ G V+++G G+   LGH +       
Sbjct: 2827 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS------- 2879

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 2880 -DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 2928



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P     L  + + Q A    R +++S +G+VY  A+  D+               +PQLV
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDTL--------------APQLV 176

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 198
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP  +    G 
Sbjct: 177 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGK 236

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 237 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 293

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 294 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 353

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 354 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 403

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 404 AAGST-----HCLALTEDSEVHSWGSNDQCQ 429



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2631 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAV 2690

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2691 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2747

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 2748 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2806

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2807 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2862

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2863 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2920



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 307

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 308 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 365

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 366 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 413



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2804

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2805 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 2862

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 2863 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 2918

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGLE 2945



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAA 254

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 255 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 312

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 313 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 368

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 369 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 423

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 424 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 466



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3639

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3640 -ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3698

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHG+      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3699 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3758

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3759 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3805

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 3806 SWGDGDYGKLG 3816



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 419 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 458



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2840 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2894

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 2895 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2952

Query: 155  AIGN 158
            A G+
Sbjct: 2953 ACGS 2956


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)

Query: 55   SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
            +++    G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G
Sbjct: 750  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 809

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
            ++YA G  +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY+
Sbjct: 810  KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 867

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            +    D +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G
Sbjct: 868  WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 923

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              G+LGH    D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG
Sbjct: 924  RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 983

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  +   VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +     
Sbjct: 984  RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 1038

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 1039 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 1087



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 785  EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 844

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 845  KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 902

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 903  AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 961

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 962  TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 1018

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 1019 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1078

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 1079 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 1128

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 1129 AGKLPA 1134



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 10/173 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
           G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 23  GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 82

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 83  ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 140

Query: 169 RVYT---FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
            V+T   ++WG++   + G+ T   + +P  L+  LE   + ++A G  + +A
Sbjct: 141 VVWTWQVYAWGDNDHGQQGNGTTTVNRKPT-LVQGLEGQKITRVACGSSHSVA 192



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 24/171 (14%)

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           PRLIE  +   ++ +  A G+ H+A +   G + TWG G YG LGHG+   +  PK+V+ 
Sbjct: 6   PRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 63

Query: 308 LNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
           L   + I VA G  D  T  ++++G V+S+G G+   LG        G+   N+  PQ +
Sbjct: 64  LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNI 115

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESG-----KLYAFGAGDKGQLG 411
             L    + V QI           + ALT+SG     ++YA+G  D GQ G
Sbjct: 116 ERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWQVYAWGDNDHGQQG 159



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 11/186 (5%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           P+L+E+LK   +   A G+  +A L+  G +YT+  G   RLGH      ++P  ++  L
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVL 64

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
               V+Q+A G      LA    G+ V+S G G  GKLG G       P+ IE+   LN 
Sbjct: 65  LGHRVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNG 120

Query: 260 QPVV-VAAGAWHAAVVGQDGRVCTW---GWG--RYGCLGHGNEECESVPKVVQALNDVKA 313
           Q V  +  GA  +  + + G V TW    WG   +G  G+G       P +VQ L   K 
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 180

Query: 314 IHVATG 319
             VA G
Sbjct: 181 TRVACG 186



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 10/79 (12%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGV-----VYSFGSNSSGQLGHGTTEEEWRPRPI 89
           L G+  C+ E      G   S+A+T  GV     VY++G N  GQ G+GTT    +P  +
Sbjct: 118 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLV 172

Query: 90  RSLQGIRIIQAAAGAGRTM 108
           + L+G +I + A G+  ++
Sbjct: 173 QGLEGQKITRVACGSSHSV 191


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 164/325 (50%), Gaps = 19/325 (5%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+ A +   + VYS+G    G+LGHG + + + P+P+++LQG++I Q A G 
Sbjct: 68  TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 127

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG+V ++G++  G+   G     L+  PQ +++ +++ V   A G   TA +
Sbjct: 128 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAV 185

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P  +  ++E   +V +A G+ + + ++   +  
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKV-SSVEGEKMVLVACGWRHTITVSDSGN-- 242

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
            +Y+ G    G+LGHG   D   P  +E  +   +  +   +G W H   +  +G++  W
Sbjct: 243 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI---SGGWRHTMALTSEGKLYGW 298

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G GN +  S P  V    D K   VA G   T  +SE  +V+S+G G S  L
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 358

Query: 344 GHNAIADGQGNRHANVLTPQLVTSL 368
           G+  I D          TP L+ +L
Sbjct: 359 GNGEIVDRN--------TPVLIDAL 375



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 177/372 (47%), Gaps = 25/372 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ +  V+ S+G    GQLGHG  E+   P  +       I     GA  T  
Sbjct: 20  AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  QVY++G   FG   +G   +  V +PQ V++L+ + + Q A G+     ++  G
Sbjct: 80  YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 137

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    E++ V  IAAG  +  A+        +Y 
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFESVCVKMIAAGAEHTAAVTEDGD---LYG 193

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +   +   +  V+VA G  H   V   G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 251

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP  V+AL D     ++ G   T  ++ +G +Y +G  +   +G    
Sbjct: 252 GQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV--- 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G  + H+   +P  V+  +  ++++ Q++      W  HT AL+E   ++++G G  G
Sbjct: 309 --GNNDDHS---SPGQVSFPE--DQKISQVACG----WR-HTLALSEKKNVFSWGRGTSG 356

Query: 409 QLGI-ELVNNQT 419
           QLG  E+V+  T
Sbjct: 357 QLGNGEIVDRNT 368



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 27/332 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72

Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ + + QIA G  + L
Sbjct: 73  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A+        V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V 
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG +  WGWGRYG LG G+     +P+ V ++   K + VA G   T  VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P  V +LK  +  + QIS      W  HT ALT 
Sbjct: 247 GWSKYGQLGHGDFEDH--------LVPHKVEALK--DSTISQISGG----WR-HTMALTS 291

Query: 396 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            GKLY +G    GQ+G   V N  +  +P +V
Sbjct: 292 EGKLYGWGWNKFGQVG---VGNNDDHSSPGQV 320



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V S+G N +GQLG GTTE+   P+ I++ + + +   AAGA  
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEH 181

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +L+  P+ V S++   +V  A G   T  +S 
Sbjct: 182 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH +   L++  + QI+ G+ + +AL  +     +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQISGGWRHTMALTSEGK---L 295

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D   P    Q      Q +   A  W H   + +   V +WG 
Sbjct: 296 YGWGWNKFGQVGVGNNDDHSSPG---QVSFPEDQKISQVACGWRHTLALSEKKNVFSWGR 352

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG+G     + P ++ AL+
Sbjct: 353 GTSGQLGNGEIVDRNTPVLIDALS 376


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           +++    G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 275

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
           ++YA G  +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY+
Sbjct: 276 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 333

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +    D +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G
Sbjct: 334 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 389

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LGH    D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 449

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G  +   VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +     
Sbjct: 450 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 504

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +V  P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 505 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 553



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 251 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 310

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 311 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 368

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 369 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 427

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 428 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 484

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 485 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 544

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 545 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 594

Query: 396 SGKLYA 401
           +GKL A
Sbjct: 595 AGKLPA 600


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3992

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3993 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4050

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4051 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4106

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4107 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4166

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4167 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4218

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4219 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4263



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 178/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 2934 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2993

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+++++ 
Sbjct: 2994 YACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3052

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  
Sbjct: 3053 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEY 3108

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 3109 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3166

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH       
Sbjct: 3167 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT----- 3221

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3222 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3270



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV+SL  +
Sbjct: 425 LASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 470

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         LS  G V+++  G+  RLGH       EP     L G      V
Sbjct: 471 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHV 530

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L +  V  
Sbjct: 531 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 587

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 588 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ ++  ++ 
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDVAAGST- 696

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 697 ----HCLALTEDSEVHSWGSNDQCQ 717



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V+ P   E L ++ VVQ A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 416 VSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 464

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P+LI  
Sbjct: 465 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 520

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 521 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 580

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 581 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 632

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 633 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 667



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 166/339 (48%), Gaps = 18/339 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3961 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4020

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4021 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4078

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4079 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4137

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4138 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4194

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4195 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4254

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            G  +   LG     DG  N    +  P+LV +L  K++N
Sbjct: 4255 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4285



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 4027 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4086

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG ++ +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 4087 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4144

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4145 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4200

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4201 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4258

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4259 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4298



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2973 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3032

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+++++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3033 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3090

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 3091 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3149

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3150 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3205

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3206 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3262



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 595

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ +V+   G+ F+  L+++G
Sbjct: 596 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 653

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 654 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 701



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3146

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG+   G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3147 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3204

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH T+ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3205 VVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYA 3260

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3287



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+++ G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 542

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 600

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 656

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHG+    ++P+L+E  +    + + VAAG+ H   + +D  V +WG   
Sbjct: 657 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 711

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 712 ------SNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 754



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3927 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 3982

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3983 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4042

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD++++G G   
Sbjct: 4043 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4102

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4103 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4149

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4150 WGDGDYGKLG 4159



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + I++   G+  ++ 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY +GK       +G +  + V  P+L+E LK   V+  A G+     L+ +  
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 707 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 746



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3182 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3236

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3237 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3294

Query: 155  AIGN 158
            A G+
Sbjct: 3295 ACGS 3298



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
           L +L  V +A       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 425 LASLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 474

Query: 316 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 371
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+L+++L  KQ 
Sbjct: 475 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKLISALSGKQA 526

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 527 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 569


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
            +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 261 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 318

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 319 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 374

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
               D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 375 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 434

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 435 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 486

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 487 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 531



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 229 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 288

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 289 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 346

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 347 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 405

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 406 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 462

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 463 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 522

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 523 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 572

Query: 396 SGKLYA 401
           +GKL A
Sbjct: 573 AGKLPA 578



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 19/251 (7%)

Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 194 ILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 250

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 251 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 309

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 310 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 369

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 370 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 416

Query: 401 AFGAGDKGQLG 411
           ++G GD G+LG
Sbjct: 417 SWGDGDYGKLG 427


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 159/326 (48%), Gaps = 29/326 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H+I V   G ++SFG N  GQLGH  +    R  P+  L+   I Q A GA  
Sbjct: 38  QVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRT--RAEPVDGLEAHNITQVACGAQH 95

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+  ++ G+V+A+G +S G+    V+ + ++ +P++V+SL    VVQ A G   +  L+ 
Sbjct: 96  TLAQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTN 154

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQP 221
            G +Y   WG+++     LG    P   E  P L+  L+ IP+  I+ G  +  + A  P
Sbjct: 155 VGEIY--CWGSNSHGQLGLGSSGTP---ETKPCLVKLLQGIPISHISCGADF--SFAVTP 207

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           SG AVY  G    G+LG G  TD   P    Q + L  Q V  +  G  H A + +DG V
Sbjct: 208 SG-AVYGWGKNSFGQLGLGDTTDRPQP---TQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 339
            T+G G YG LGH     E +P+ V  L       +  G  +T   V   G +Y+FG G 
Sbjct: 264 FTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGG 323

Query: 340 SASLGHNAIADGQGNRHANVLTPQLV 365
           S  LG  +         ANV +PQLV
Sbjct: 324 SGQLGTKST--------ANVNSPQLV 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 29/314 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAG 103
           +Q   G  H++A    G V+++GSNS+GQLG    EE   P P  ++SL   +++Q A G
Sbjct: 87  TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLN-VEESMMPTPKMVKSLATKQVVQIACG 145

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              +M +++ G++Y +G +S G+   G  GT   T P LV+ L+ I +   + G  F+  
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTP-ETKPCLVKLLQGIPISHISCGADFSFA 204

Query: 164 LSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 218
           ++  G VY   WG ++     LG  T+     P P  L +L    V  I  G  +  AL 
Sbjct: 205 VTPSGAVY--GWGKNSFGQLGLGDTTD----RPQPTQLKSLRFQRVTYIRCGMDHTAALT 258

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQD 277
                  V++ G G+ G+LGH +  +E  PR +   +L+      +  G  H  A V   
Sbjct: 259 ---RDGGVFTFGAGMYGQLGHCTSANEMLPRKV--LELMGTTVTQICCGRCHTLAFVPSK 313

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVV--------QALNDVKAIHVATGDYTTFVVSED 329
           GR+  +G G  G LG  +    + P++V         ++ DVK +   T +  + + S+ 
Sbjct: 314 GRIYAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKDVKDLATETAEALSAIQSKR 373

Query: 330 GDVYSFGCGESASL 343
             V +  CG   S 
Sbjct: 374 VVVRNIFCGGDQSF 387



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 30/325 (9%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           I+Q   G   T+L+   G++++FG + +G+  +    T+     + V+ L+   + Q A 
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTR----AEPVDGLEAHNITQVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           G   T   +  G V  F+WG+++  +LG + E + +    ++ +L    VVQIA G  + 
Sbjct: 92  GAQHTLAQNEWGEV--FAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHS 149

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           +AL    +   +Y  G    G+LG GS  T E  P L++  Q + +  +  + GA  +  
Sbjct: 150 MALT---NVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHI--SCGADFSFA 204

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           V   G V  WG   +G LG G+      P  +++L   +  ++  G   T  ++ DG V+
Sbjct: 205 VTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVF 264

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           +FG G    LGH           AN + P+ V  L  +   V QI          HT A 
Sbjct: 265 TFGAGMYGQLGHCT--------SANEMLPRKVLEL--MGTTVTQICCG-----RCHTLAF 309

Query: 394 TES-GKLYAFGAGDKGQLGIELVNN 417
             S G++YAFG G  GQLG +   N
Sbjct: 310 VPSKGRIYAFGLGGSGQLGTKSTAN 334


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 173/324 (53%), Gaps = 23/324 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT  G +++FG+N  GQLG G+ +   +P  +++L+  +I   AAG   T+ +
Sbjct: 43  GDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAV 102

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D+ ++Y+FG+ S G   +G +    +  P  +ESL++  V   A G + +A +++ G +
Sbjct: 103 TDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITKNGEL 160

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           Y +   ++ +LG     ND   +P +  L    V+ +A GY +   +        +Y+ G
Sbjct: 161 YIWGSNSEGQLGL---KNDTISYPTMLDL-GKSVISVACGYYHTAVVTADGK---LYTFG 213

Query: 231 CGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
              GGKLG G     K   P++++    ++ + V VA G  H   +   G+V T+G G+ 
Sbjct: 214 ETEGGKLGLGDIEAHKVTKPKVVKG---ISGKVVKVACGGNHTVALTASGQVYTFGSGQN 270

Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LG G++  +S +PK+V+AL+  K  H+A G+  T VVS+ G++++FG G    L    
Sbjct: 271 GQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKL---- 326

Query: 348 IADGQGNRH-ANVLTPQLVTSLKQ 370
              GQG+   +N+  P  V  LK+
Sbjct: 327 ---GQGDESFSNLFKPVKVQRLKE 347



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 21/310 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AVT    +YSFG  S G LGHG   +   P  I SL+   +   A G   +  
Sbjct: 94  AGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAA 153

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+  G++Y +G +S  E + G++    ++ P +++  K++  V  A G + TAV++ +G+
Sbjct: 154 ITKNGELYIWGSNS--EGQLGLKND-TISYPTMLDLGKSVISV--ACGYYHTAVVTADGK 208

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENI--PVVQIAAGYCYLLALACQPSGMA 225
           +YTF      +LG      D+E H +     ++ I   VV++A G  + +AL    SG  
Sbjct: 209 LYTFGETEGGKLG----LGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTA--SGQ- 261

Query: 226 VYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           VY+ G G  G+LG GS+  D   P+L+E      ++   +A G  H AVV   G + T+G
Sbjct: 262 VYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKH--IACGESHTAVVSDKGELFTFG 319

Query: 285 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            GR+G LG G+E   ++  P  VQ L +   +H+A G   T V     D  + G  ++ S
Sbjct: 320 DGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNES 379

Query: 343 LGHNAIADGQ 352
             ++ +  G+
Sbjct: 380 SSNDEVDFGK 389



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 38/352 (10%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G V++FG +   + G   T + W    IRS    ++   A G   T+++++ G+++ FG 
Sbjct: 12  GAVFTFGKS---RFGDNRTNKFW----IRS---DKVTDIACGDEHTVVVTENGRLFTFGN 61

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           + +G+   G+   K    P  V++LK   +   A G F T  ++   ++Y+F  G++  L
Sbjct: 62  NEWGQ--LGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGAL 119

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           GH  E  D+     + +LE+  V  IA G  +  A+        +Y  G    G+LG  +
Sbjct: 120 GHGDE-TDLNMPTSIESLEDKDVNIIACGGYHSAAIT---KNGELYIWGSNSEGQLGLKN 175

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
            T   +P +++    L    + VA G +H AVV  DG++ T+G    G LG G+ E   V
Sbjct: 176 DTIS-YPTMLD----LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKV 230

Query: 302 --PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             PKVV+ ++  K + VA G   T  ++  G VY+FG G++  LG        G++  + 
Sbjct: 231 TKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLG-------LGSKIMDS 282

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             P+LV +L +   ++  I+   S     HT  +++ G+L+ FG G  G+LG
Sbjct: 283 NIPKLVEALSK--RKIKHIACGES-----HTAVVSDKGELFTFGDGRHGKLG 327



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 41/306 (13%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I + G V+ FGK  FG+           T+   + S K   V   A G+  T V++  GR
Sbjct: 8   IPETGAVFTFGKSRFGDNR---------TNKFWIRSDK---VTDIACGDEHTVVVTENGR 55

Query: 170 VYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           ++TF    WG   +LG  +     +P   +  L+   +  +AAG  + LA+        +
Sbjct: 56  LFTFGNNEWG---QLGIGSNKTRNKP-TTVKALKPEKITHVAAGRFHTLAVT---DSNKL 108

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           YS G G  G LGHG  TD   P  IE  +  ++   ++A G +H+A + ++G +  WG  
Sbjct: 109 YSFGQGSEGALGHGDETDLNMPTSIESLEDKDVN--IIACGGYHSAAITKNGELYIWGSN 166

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LG  N+   S P ++     V  I VA G Y T VV+ DG +Y+FG  E   LG  
Sbjct: 167 SEGQLGLKNDTI-SYPTMLDLGKSV--ISVACGYYHTAVVTADGKLYTFGETEGGKLG-- 221

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
            + D + ++   V  P++V   K ++ +VV+++   +     HT ALT SG++Y FG+G 
Sbjct: 222 -LGDIEAHK---VTKPKVV---KGISGKVVKVACGGN-----HTVALTASGQVYTFGSGQ 269

Query: 407 KGQLGI 412
            GQLG+
Sbjct: 270 NGQLGL 275



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 15/150 (10%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           +A G  H  VV ++GR+ T+G   +G LG G+ +  + P  V+AL   K  HVA G + T
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHT 99

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             V++   +YSFG G   +LGH    D             + TS++ + ++ V I     
Sbjct: 100 LAVTDSNKLYSFGQGSEGALGHGDETD-----------LNMPTSIESLEDKDVNIIACGG 148

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                H+ A+T++G+LY +G+  +GQLG++
Sbjct: 149 Y----HSAAITKNGELYIWGSNSEGQLGLK 174


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGS 4187

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4239

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4240 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKID--SLTGLGVVKVECGSQFSVALT 4215

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4326 AGKLPA 4331



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 152/283 (53%), Gaps = 37/283 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            ++  V+++   +       + ALT+ G++Y++G GD  +LG+
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLGL 692



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ 
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G   A  +    +G V +WG G 
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGD 3182

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287

Query: 408  GQLG 411
            GQ G
Sbjct: 3288 GQQG 3291



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LG             +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGLGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGTRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLG  TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGLGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G    +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LG G+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGLGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4003

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4124 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4170

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4171 WGDGDYGKLG 4180



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK        G+   + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGD--NQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L++  +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 14/298 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V ++G VY+ GSN  GQLG     +  RP  I +L    I Q + G    +++
Sbjct: 42  GRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHK--RPTVITALDTQSIQQVSCGDYHNLVV 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D  QV+++G D  G+  + ++ G      P++V+ L ++ +VQ A G   +  LS +GR
Sbjct: 100 NDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGR 159

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  FSWGN++  +LG  +  N  +P  L  +L  IP  QI AG  +   L+   SG AV+
Sbjct: 160 I--FSWGNNSHGQLGIGSTKNQPKPQELT-SLTGIPFCQIVAGGSHSFVLS--KSG-AVF 213

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG G   D K+P  ++   L +L+   ++ G  H AV+  DG V T+G G 
Sbjct: 214 GFGRNTFGQLGLGDTGDRKYPTHVKS--LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGS 271

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E++P+ V  L  ++   +A G  +T   V   G +YSFG G +  LG
Sbjct: 272 YGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 174/357 (48%), Gaps = 37/357 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           ++ +G+  +G+LG G  EE+     + +P  + + +R  + + G   T+ +   G VY  
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMR--EVSCGRQHTVFVLAEGTVYTC 58

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND- 178
           G + +G+    +   K    P ++ +L    + Q + G++   V++ + +V  FSWG D 
Sbjct: 59  GSNDYGQ----LGQDKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQV--FSWGYDD 112

Query: 179 -ARLGHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             +LGH  E   N+     ++  L ++ +VQ+A G  + LAL+   +   ++S G    G
Sbjct: 113 CGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALS---NDGRIFSWGNNSHG 169

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG GS  ++  P+  E   L  +    + AG  H+ V+ + G V  +G   +G LG G+
Sbjct: 170 QLGIGSTKNQPKPQ--ELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD 227

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
                 P  V++L  +K  H++ G+  T V++ DG V +FG G    LGHN+      N 
Sbjct: 228 TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNS------NN 281

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           H  +  P+ V  L       + + +T       HT A  ES G++Y+FG G  GQLG
Sbjct: 282 HEAL--PRKVFEL-------MGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS+A+++ G ++S+G+NS GQLG G+T+ + +P+ + SL GI   Q  AG   
Sbjct: 143 QVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSH 202

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           + ++S +G V+ FG+++FG+   G  G +    P  V+SL+++ V   + G   TAVL+ 
Sbjct: 203 SFVLSKSGAVFGFGRNTFGQLGLGDTGDR--KYPTHVKSLRSLKVTHISCGEEHTAVLTL 260

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G V TF  G+  +LGH++  ++  P  +   L  + V Q+A G  + +A   + SG  +
Sbjct: 261 DGGVLTFGAGSYGQLGHNSNNHEALPRKVF-ELMGLEVTQLACGRMHTMAYV-ESSG-RI 317

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIE 252
           YS G G  G+LG    T+   P  ++
Sbjct: 318 YSFGLGGNGQLGSKGTTNCNTPITVD 343



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 103
           Q   G  H++ V  K  V+S+G +  GQLGH          RPR ++ L  ++I+Q A G
Sbjct: 88  QVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACG 147

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ +S+ G+++++G +S G+   G+  TK    PQ + SL  I   Q   G   + V
Sbjct: 148 GKHSLALSNDGRIFSWGNNSHGQL--GIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFV 205

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           LS+ G V+ F      +LG   +  D +    + +L ++ V  I+ G  +   L      
Sbjct: 206 LSKSGAVFGFGRNTFGQLG-LGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDG-- 262

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCT 282
             V + G G  G+LGH S   E  PR +  F+L+ L+   +A G  H  A V   GR+ +
Sbjct: 263 -GVLTFGAGSYGQLGHNSNNHEALPRKV--FELMGLEVTQLACGRMHTMAYVESSGRIYS 319

Query: 283 WGWGRYGCLG-HGNEECES 300
           +G G  G LG  G   C +
Sbjct: 320 FGLGGNGQLGSKGTTNCNT 338


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1048

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 1049 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDG 1106

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 1107 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 1162

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 1163 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 1222

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 1223 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 1274

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 1275 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 1319



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 1017 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 1076

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 1077 KKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 1134

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 1135 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 1193

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 1194 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 1250

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 1251 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1310

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 1311 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 1360

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 1361 AGKLPA 1366



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 173/348 (49%), Gaps = 26/348 (7%)

Query: 68  GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
           G N   QLG     +   P    +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 1   GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 185
             G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 61  GLGMS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 119

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
             N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 120 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 175

Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 303
             P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 176 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 233

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 234 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 285

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 286 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 326



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 160/347 (46%), Gaps = 23/347 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G     AVT +G VYS G  ++G+LG G +      PR I +L    + + A  +G
Sbjct: 32  QVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSG 91

Query: 106 ---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
               T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+  +A
Sbjct: 92  GRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 148

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA    
Sbjct: 149 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALTDE 207

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
           G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G V 
Sbjct: 208 GL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGVVW 263

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G  +  
Sbjct: 264 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG 323

Query: 342 SLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 387
                     QGN    V   P LV  L+      V    ++S+ W 
Sbjct: 324 Q---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 982  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 1040

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                 +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 1041 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1097

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG  + G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 1098 YSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1157

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 1158 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 1204

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 1205 SWGDGDYGKLG 1215



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 238 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 292

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 293 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 350

Query: 155 AIGN 158
           A G+
Sbjct: 351 ACGS 354


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3951

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V+SP L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3952 GA--GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4009

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH +      P  ++ +L  + VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4010 KLGHGSRSPCDRPR-VIESLRGVEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4065

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4066 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4125

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4126 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4177

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4178 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4222



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3920 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFI 3979

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ + VV  A
Sbjct: 3980 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGVEVVDVA 4037

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4038 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4096

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4097 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4153

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4154 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4213

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 4214 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPTS 4263

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4264 AGKLPA 4269



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 26/357 (7%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+VYA
Sbjct: 2896 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2955

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G
Sbjct: 2956 CGEATNGRLGLGI-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+
Sbjct: 3015 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 3070

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 3071 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3128

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  +VP+ ++ LN      +  G   +  +++ G V+++G G+   LGH +       
Sbjct: 3129 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS------- 3181

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3182 -DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3230



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2933 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAV 2992

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2993 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3049

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3050 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3108

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3109 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 3164

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3165 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3222



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR G VYT ++ +D           + P  L+
Sbjct: 370 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDT----------LAPQ-LV 418

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 419 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 474

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G Y  L HG      +  ++  L+  
Sbjct: 475 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQ 534

Query: 312 KAIHVATGDY--TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I+ + G     T    E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 535 KFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 586

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 587 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 621



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3106

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3107 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 3164

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3165 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3220

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3247



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 43/327 (13%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G VY  A+  D+               +PQLV+ L  +
Sbjct: 379 LANLGVTQIACAEKRFLILSRNGCVYTQAYNSDTL--------------APQLVQGLASR 424

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 425 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 484

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G   +L HG      +  LI    L   + +  
Sbjct: 485 VHIACGSTYSAAITAEGE---LYTWGRGNYXRLDHGRSA--MNEILIMISGLDRQKFIYK 539

Query: 265 AAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
           + G   A  +   ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   
Sbjct: 540 SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 599

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  +
Sbjct: 600 SIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGS 649

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +     H  ALTE  +++++G+ D+ Q
Sbjct: 650 T-----HCLALTEDSEVHSWGSNDQCQ 671



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3941

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3942 -ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4000

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHG+      P+V+++L  V+ + VA G   +  V+  GD+Y++G G  
Sbjct: 4001 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4060

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4061 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4107

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4108 SWGDGDYGKLG 4118



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
           G  +S A+T++G +Y++G  +  +L HG +        I  L   + I  + G    +T+
Sbjct: 490 GSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTL 549

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
              + GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 550 AFYENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 607

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 608 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 655



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3142 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3196

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3197 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3254

Query: 155  AIGN 158
            A G+
Sbjct: 3255 ACGS 3258



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 5/159 (3%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
             ++A    G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ ++ 
Sbjct: 546 AQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 605

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  V+ 
Sbjct: 606 DGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH- 662

Query: 173 FSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
            SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 663 -SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 700



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 44/72 (61%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   SIA+T  G VYS+G   + +LGHGT E    P+ +  LQG ++I  AAG+   + +
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655

Query: 111 SDAGQVYAFGKD 122
           ++  +V+++G +
Sbjct: 656 TEDSEVHSWGSN 667


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4021

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4022 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4079

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4080 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4135

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q  ++  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4136 SDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4195

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4196 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4247

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4248 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4292



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3990 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4049

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4050 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4107

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4108 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHHVVDVACGSGDAQ 4166

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4167 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4223

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4224 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4283

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4284 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4333

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4334 AGKLPA 4339



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2958 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3017

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3018 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3076

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3077 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3132

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3133 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3190

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3191 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3249

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3250 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3295

Query: 409  QLG 411
            Q G
Sbjct: 3296 QQG 3298



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 3001 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3060

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3061 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3117

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3118 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3176

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3177 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3232

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3233 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3290



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3174

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3175 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3232

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3233 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3288

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3315



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4011

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4012 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4070

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4071 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4130

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+     VV ++  +    +A T  LT+   ++
Sbjct: 4131 GRLGHSDSEDQ--------LKPKLVEALQ--GHHVVDVACGSG---DAQTLCLTDDDTVW 4177

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4178 SWGDGDYGKLG 4188



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3210 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3264

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3265 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3322

Query: 155  AIGN 158
            A G+
Sbjct: 3323 ACGS 3326


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4015 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q  ++  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4129 SDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4240

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4241 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHHVVDVACGSGDAQ 4159

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4160 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4216

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4277 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4326

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4327 AGKLPA 4332



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288

Query: 409  QLG 411
            Q G
Sbjct: 3289 QQG 3291



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+     VV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHHVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3991

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3992 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4049

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4050 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4105

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4106 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4165

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4166 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4217

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4218 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4262



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 417 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 465

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 466 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 521

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 522 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 581

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 582 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 633

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 634 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 668



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3960 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4019

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4020 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4077

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4078 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4136

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4137 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4193

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4194 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4253

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4254 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4303

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4304 AGKLPA 4309



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2928 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2987

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 2988 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3046

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3047 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3102

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3103 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3160

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3161 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3219

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3220 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3265

Query: 409  QLG 411
            Q G
Sbjct: 3266 QQG 3268



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 426 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 471

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 472 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 531

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 532 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 588

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 589 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 697

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 698 ----HCLALTEDSEVHSWGSNDQCQ 718



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 537 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 596

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 597 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 654

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 655 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 702



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2971 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3030

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3031 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3087

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3088 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3146

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3147 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3202

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3203 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3260



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3144

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3145 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3202

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3203 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3258

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3285



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 543

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 544 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 601

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 602 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 657

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 658 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 712

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 713 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 755



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3981

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3982 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4040

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4041 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4100

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4101 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4147

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4148 SWGDGDYGKLG 4158



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 708 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 747



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3180 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3234

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3235 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3292

Query: 155  AIGN 158
            A G+
Sbjct: 3293 ACGS 3296


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDG 4074

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4130

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4242

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4243 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+V
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH   
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3245

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3246 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3291

Query: 409  QLG 411
            Q G
Sbjct: 3292 QQG 3294



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V+ P   E L N+ V+Q A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV+SL  +
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         LS  G V+++  G+  RLGH       EP     L G      V
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 166/339 (48%), Gaps = 18/339 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4045 KKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4218

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            G  +   LG     DG  N    +  P+LV +L  K++N
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4309



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++ +G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 4051 SGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG ++ +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4224

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4322



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ +V+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P++V+ L    V+Q A G  +  T  L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3284

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+++ G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHG+    ++P+L+E  +    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4006

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVY 4066

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD++++G G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4127 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4173

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4174 WGDGDYGKLG 4183



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + I++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY +GK       +G +  + V  P+L+E LK   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318

Query: 155  AIGN 158
            A G+
Sbjct: 3319 ACGS 3322



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
           L NL  + VA       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498

Query: 316 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 371
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+++++L  KQ 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKMISALSGKQA 550

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1604

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 1605 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 1662

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 1663 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 1718

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 1719 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 1778

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 1779 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 1830

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 1831 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 1875



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 1573 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 1632

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 1633 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 1690

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 1691 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 1749

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 1750 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 1806

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 1807 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1866

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 1867 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 1916

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 1917 AGKLPA 1922



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 547 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 606

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
           YA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 607 YACGEATNGRLGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 665

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 666 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 721

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
           G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 722 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 779

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +     
Sbjct: 780 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 834

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 835 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 883



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45  NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
           N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 586 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 645

Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 646 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 702

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 703 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 761

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 762 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 817

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 818 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 875



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
           G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 759

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 760 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 817

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 818 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 873

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
            G    G+ G+G+ T  + P L++  +
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGLE 900



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 1539 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 1594

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 1595 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 1654

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 1655 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1714

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 1715 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 1761

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 1762 WGDGDYGKLG 1771



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 795 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 849

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 850 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 907

Query: 155 AIGN 158
           A G+
Sbjct: 908 ACGS 911


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G    + ++  G++YA G 
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGY 3763

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3764 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3821

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3822 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3877

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3878 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3937

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3938 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3989

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3990 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4034



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G    +AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3732 EALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3791

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3792 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3849

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 3850 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3908

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 3909 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 3965

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3966 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4025

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4026 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4075

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4076 AGKLPA 4081



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 2706 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2765

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 2766 YACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2824

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 2825 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 2880

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 2881 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2938

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +     
Sbjct: 2939 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 2993

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 2994 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3042



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   + L N+ V Q A       ++ R GRV T ++ +D  +             L+
Sbjct: 416 VIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTLVPQ-----------LV 464

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  VV+IAA   G+ YL ALA   +   VYS GCG G +LGHG     + P++I  
Sbjct: 465 QGLASRNVVKIAAHSDGHHYL-ALA---ATGEVYSWGCGDGRRLGHGDTVPLEEPKVISA 520

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 521 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 632

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 633 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 667



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 41/332 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P   + L  + + Q A    R +++   G+V   A+  D+                PQLV
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTL--------------VPQLV 464

Query: 144 ESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLG 197
           + L +  VV+ A    G+ + A L+  G VY++  G+  RLGH       EP       G
Sbjct: 465 QGLASRNVVKIAAHSDGHHYLA-LAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSG 523

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
                 VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L
Sbjct: 524 KQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V 
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVR 640

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ 
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVID 690

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           ++  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 691 VAAGST-----HCLALTEDSEVHSWGSNDQCQ 717



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2745 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2804

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2805 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2861

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 2862 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2920

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2921 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2976

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2977 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3034



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 595

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 596 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 653

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 654 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 701



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2918

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2919 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 2977 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3032

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3059



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 23/252 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G     +LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 542

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 600

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 656

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 657 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 711

Query: 288 YGCLGHGNEECE 299
                  N++C+
Sbjct: 712 ------SNDQCQ 717



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   LLA+    
Sbjct: 3698 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLLAVT--- 3753

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3754 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3813

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 3814 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 3874 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 3920

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 3921 WGDGDYGKLG 3930



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 707 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 746



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2954 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3008

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3009 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3066

Query: 155  AIGN 158
            A G+
Sbjct: 3067 ACGS 3070


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 162/323 (50%), Gaps = 15/323 (4%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+ A +   + VYS+G    G+LGHG + + + P+P+++LQG++I Q A G 
Sbjct: 69  TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 128

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AGQV ++G++  G+   G     L+  PQ +++ + + V   A G   TA +
Sbjct: 129 SHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFEGVCVKMIAAGAEHTAAV 186

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P   + ++E   +V +A G+ + + ++   +  
Sbjct: 187 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEK-VSSVEGEKMVLVACGWRHTITVSDSGN-- 243

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
            +Y+ G    G+LGHG   D   P  +E  +   +  +   +G W H   +  +G++  W
Sbjct: 244 -LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQI---SGGWRHTMALTSEGKLYGW 299

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G GN +    P  V    D K   VA G   T  +SE  +V+S+G G S  L
Sbjct: 300 GWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 359

Query: 344 GHNAIADGQGNRHANVLTPQLVT 366
           G+  I D    R+  VL   L T
Sbjct: 360 GNGEIVD----RNTPVLIDALST 378



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 25/372 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ +  V+ S+G    GQLGHG  E+   P  +       I     GA  T  
Sbjct: 21  AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTA 80

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  QVY++G   FG   +G   +  V +PQ V++L+ + + Q A G+     ++  G
Sbjct: 81  YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 138

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V ++    + +LG  T  + + P  +    E + V  IAAG  +  A+        +Y 
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFEGVCVKMIAAGAEHTAAVTEDGD---LYG 194

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +   +   +  V+VA G  H   V   G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 252

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP  ++AL D     ++ G   T  ++ +G +Y +G  +   +G    
Sbjct: 253 GQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV--- 309

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G  + H + +           ++++ Q++      W  HT AL+E   ++++G G  G
Sbjct: 310 --GNNDDHCSPVQVHFPE-----DQKISQVACG----WR-HTLALSEKKNVFSWGRGTSG 357

Query: 409 QLGI-ELVNNQT 419
           QLG  E+V+  T
Sbjct: 358 QLGNGEIVDRNT 369



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 31/334 (9%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPGITSVIC 73

Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCY 213
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ + + QIA G  +C 
Sbjct: 74  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 132

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            + +A Q     V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A 
Sbjct: 133 AVTMAGQ-----VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK--MIAAGAEHTAA 185

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           V +DG +  WGWGRYG LG G+     +P+ V ++   K + VA G   T  VS+ G++Y
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G  +   LGH    D         L P  + +LK  +  + QIS      W  HT AL
Sbjct: 246 TYGWSKYGQLGHGDFEDH--------LVPHKLEALK--DSTISQISGG----WR-HTMAL 290

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           T  GKLY +G    GQ+G   V N  +  +P +V
Sbjct: 291 TSEGKLYGWGWNKFGQVG---VGNNDDHCSPVQV 321


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4015 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4129 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4240

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4241 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4159

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4160 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4216

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4277 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4326

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4327 AGKLPA 4332



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288

Query: 409  QLG 411
            Q G
Sbjct: 3289 QQG 3291



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG +Y++    D 
Sbjct: 2823 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDG 2880

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  + VV IAAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 2881 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELYTWGKGRYGRLGH 2936

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 2937 GDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 2996

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 2997 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3048

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3049 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3093



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 178/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 1763 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKV 1822

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++ 
Sbjct: 1823 YACGEATNGRLGLGL-SSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1881

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  
Sbjct: 1882 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEY 1937

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P+L++   LL  + V VA G+  A  +    +G V +WG G +G LG
Sbjct: 1938 GRLGHGDNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG 1995

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH       
Sbjct: 1996 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT----- 2050

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+TE+G+++A+G  D GQ G
Sbjct: 2051 ---DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTETGQVFAWGDNDHGQQG 2099



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 2791 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2850

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G++Y++G+   G+  +G +       P+++ESL+ + VV  A
Sbjct: 2851 RKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 2908

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ +A G     
Sbjct: 2909 AGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGHRVIDVACGSGDAQ 2967

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L      M V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 2968 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 3024

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3025 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3084

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 3085 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 3134

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 3135 AGKLPA 3140



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT++G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 1802 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAV 1861

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 1862 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1919

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +Y++  G   RLGH      + P  L+  L    VVQ+A G      LA  
Sbjct: 1920 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVVQVACGSRDAQTLALT 1978

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              GM V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 1979 DEGM-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2034

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P++V+ L   K +HVA G      V+E G V+++G
Sbjct: 2035 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWG 2091



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 1863 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 1922

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y++G   +G   +G   T+L   P+LV+ L    VVQ A G  +  T  L+ E
Sbjct: 1923 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVVQVACGSRDAQTLALTDE 1980

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 1981 GMVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2032

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V + G+V  
Sbjct: 2033 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTETGQVFA 2089

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2126



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 2812

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G +
Sbjct: 2813 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 2871

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G++Y++G G  
Sbjct: 2872 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRY 2931

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 2932 GRLGHGDSEDQ--------LKPKLVEALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 2978

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 2979 SWGDGDYGKLG 2989



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 2011 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 2065

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + +++ GQV+A+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 2066 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2123

Query: 155  AIGN 158
            A G+
Sbjct: 2124 ACGS 2127


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4015 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4129 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4240

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4241 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4159

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4160 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4216

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4277 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4326

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4327 AGKLPA 4332



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288

Query: 409  QLG 411
            Q G
Sbjct: 3289 QQG 3291



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           +++    G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 353

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
           ++YA G  +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY+
Sbjct: 354 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 411

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +    D +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G
Sbjct: 412 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 467

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LGH    D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 527

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G  +   VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +     
Sbjct: 528 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 582

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +V  P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 583 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 631



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 329 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 388

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 389 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 446

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 447 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 505

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 506 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 562

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 563 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 622

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 623 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 672

Query: 396 SGKLYA 401
           +GKL A
Sbjct: 673 AGKLPA 678


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4025 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L    VV IAAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4083 KLGHGNRSPCDRPR-VIESLRGTEVVDIAAGGAHS---ACITAAGELYTWGKGRYGRLGH 4138

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4139 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4198

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  V    V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4199 KVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4250

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4251 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4295



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 148/282 (52%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V+ P   E+L N+ V Q A       +LSR G++YT ++ N          N + P  L+
Sbjct: 439 VSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN----------NTLGPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G  YL   A       ++S GCG GG+LGHG     + P+L+  
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATS----ELFSWGCGDGGRLGHGDTVSLEEPKLVSA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +    Q + +A G+ ++A +  DG + TWG G YG LGHG+ E ++VP +V  L  +
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K + V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++   +       + A+T+ G++Y++G GD  +LG
Sbjct: 656 DLD--IVKVRCGSQF-----SIAITKDGQVYSWGKGDNQRLG 690



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+G  ++  AAG   +  
Sbjct: 4059 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSAC 4118

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG++Y +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 4119 ITAAGELYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4176

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V ++  G  + +AL    SG AVY
Sbjct: 4177 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGVGVTKVECGSQFSVALT--KSG-AVY 4232

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4233 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4291 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4330



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 164/339 (48%), Gaps = 18/339 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3993 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4052

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+   VV  A
Sbjct: 4053 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDIA 4110

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4111 AGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4169

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  +    V  G+  +  + 
Sbjct: 4170 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGVGVTKVECGSQFSVALT 4226

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4227 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4286

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            G  +   LG     DG  N    +  P+LV +L  K++N
Sbjct: 4287 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4317



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P    +L  + + Q A      +++S  G++Y  A+  ++ G              PQLV
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLG--------------PQLV 487

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
           + L  +NI  + A         LS    ++++  G+  RLGH    +  EP     L G 
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGK 547

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                V+ IA G  Y  A+    +   +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 548 QTGKQVIHIACGSTYSAAIT---ADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLK 604

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 664

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VYS+G G++  LGH            +V  P+++  L+   ++VV +
Sbjct: 665 GSQFSIAITKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKIMNGLQ--GKKVVDV 714

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           ++ ++     H  ALTESG++Y++G+ D+ Q
Sbjct: 715 AVGST-----HCLALTESGEVYSWGSNDQCQ 740



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+VYA
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3019

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G
Sbjct: 3020 CGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3078

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+
Sbjct: 3079 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGR 3134

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  ++P+ ++ LN      +  G   +  +++ G V+++   +               
Sbjct: 3193 GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCL--------AVXF 3244

Query: 355  RHANVLTPQLVTSLKQVNERVV---QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             + N L   L   L +V+ R V   Q   T + Y+  +   +  S K+YA+G  D GQ G
Sbjct: 3245 YYXNYL---LELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQG 3301



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 108/169 (63%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T+ G +Y++G  + G+LGHG++E++  P  +  L+G++++  + G+G  +T+
Sbjct: 559 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ +V+   G+ F+  ++++G
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  ++  L+   VV +A G  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-IMNGLQGKKVVDVAVGSTHCLAL 724



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ----GIRIIQAAAGAGRTML 109
           H +A+++   ++S+G    G+LGHG T     P+ + +L     G ++I  A G+  +  
Sbjct: 506 HYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS--RE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + VV  + G+     LS    
Sbjct: 566 ITADGELYTWGRGNYGRLGHGSSEDQ--TVPMLVTGLKGLKVVDVSCGSGDAQTLSVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +A+        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIAIT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+++   Q    + V VA G+ H   + + G V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKIMNGLQ--GKKVVDVAVGSTHCLALTESGEVYSWG--- 734

Query: 288 YGCLGHGNEECE---------SVPKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+          VP V+  L+    + ++ G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQSFAWS 777



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3959 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4014

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4015 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L   + + +A G   +  ++  G++Y++G G   
Sbjct: 4075 SWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYG 4134

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4135 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4181

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4182 WGDGDYGKLG 4191



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG+   G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSG 3228

Query: 169  RVYTF 173
             V+T+
Sbjct: 3229 VVWTW 3233



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 123/254 (48%), Gaps = 15/254 (5%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT++G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2997 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G  + G         P+L+E+LK   +   A G+ 
Sbjct: 3057 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3114 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3172

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3173 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQAVCQIECGAQFSLALTKSG 3228

Query: 279  RVCTWGWGRYGCLG 292
             V TW   ++ CL 
Sbjct: 3229 VVWTWXXTKH-CLA 3241



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   +++VT  G V+S+G    G+LG G ++    P+ I  LQ + I++   G+  ++ 
Sbjct: 612 SGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+  GQVY++GK       +G +  + V  P+++  L+   VV  A+G+     L+  G 
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTE--EHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           VY  SWG++ +  H       +P P +L  L++  +V I+ G
Sbjct: 730 VY--SWGSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCG 769



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 19/123 (15%)

Query: 302 PKVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           P++VQ L     + +A    G +    +S   +++S+GCG+   LGH            +
Sbjct: 484 PQLVQGLASRNIVKIAAHPDGQHY-LALSATSELFSWGCGDGGRLGHGDTV--------S 534

Query: 359 VLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           +  P+LV++L  KQ  ++V+ I+  ++     ++ A+T  G+LY +G G+ G+LG     
Sbjct: 535 LEEPKLVSALSGKQTGKQVIHIACGST-----YSAAITADGELYTWGRGNYGRLGHGSSE 589

Query: 417 NQT 419
           +QT
Sbjct: 590 DQT 592


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 35/381 (9%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + ++  V ++GS   GQLG G  EE+     +++L+  ++    AG+  ++ I D G+++
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLF 60

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +  G   +  + TK    P  V++L N+ +VQAAIG +    +  +GR Y +    
Sbjct: 61  TWGWNQRGTLGHPPE-TKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 178 DARLGHHTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
             + G   E  D    PL   +         + V Q+AAG  + + L  +     V+S  
Sbjct: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGH---VWS-- 174

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G     G       P  ++  + + L    +A GA+H   + +DG +  WG   YG 
Sbjct: 175 --WGQPWPPGDIKQISVPVRVQGLERVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQ 228

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG G+ +  S P  VQ L+ +  + +A G + +  +++DG+VY +G GE   LG      
Sbjct: 229 LGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD--- 285

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
              N  ++ + PQ V  L  V E +VQ+S   +     H+ ALT  G++Y FG GD G+L
Sbjct: 286 ---NDKSSKMVPQRVNLL--VGEDIVQVSCGGT-----HSVALTRDGRMYTFGRGDHGRL 335

Query: 411 GIELVNNQTERGNPERVDIDL 431
           G      +   G P  V ID+
Sbjct: 336 GY---GRKVTTGQPMEVPIDI 353



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 27/309 (8%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  + I+QAA G    
Sbjct: 44  VAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA--------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           + + D G+ YA+G + +G+         + G    + +  PQ   S   + V Q A G  
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAS--KLVVRQVAAGGT 161

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALA 218
            + VL+REG V+++        G    P D++   +   ++ +  V+ IA G  + LAL 
Sbjct: 162 HSVVLTREGHVWSW--------GQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLAL- 212

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            Q  G  +++ G    G+LG G       P  ++    L L  V +AAG WH+  +  DG
Sbjct: 213 -QEDG-TLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTL--VDIAAGGWHSTALTDDG 268

Query: 279 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V  WG G +G LG G+ +  S  VP+ V  L     + V+ G   +  ++ DG +Y+FG
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFG 328

Query: 337 CGESASLGH 345
            G+   LG+
Sbjct: 329 RGDHGRLGY 337



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 26/270 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 98
           QA  G  H +AV  +G  Y++G N  GQ G     ++   RP+R            + + 
Sbjct: 95  QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVR 154

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q AAG   +++++  G V+++G+       +     K ++ P  V+ L+ + ++  A+G 
Sbjct: 155 QVAAGGTHSVVLTREGHVWSWGQ------PWPPGDIKQISVPVRVQGLERVRLI--AVGA 206

Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           F    L  +G ++  +WGN+   +LG        +P  + G L  + +V IAAG  +  A
Sbjct: 207 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPITVQG-LSGLTLVDIAAGGWHSTA 263

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L        VY  G G  G+LG G   D+    + ++  LL  + +V V+ G  H+  + 
Sbjct: 264 LT---DDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALT 319

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
           +DGR+ T+G G +G LG+G +     P  V
Sbjct: 320 RDGRMYTFGRGDHGRLGYGRKVTTGQPMEV 349


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 173/377 (45%), Gaps = 37/377 (9%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLQGI 95
           E    ++  +  AG   S+A+T  G VYS+G N  G LGH    +    +P  I  L G 
Sbjct: 77  EVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGK 136

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGE---AEYGVQGTKLVTS------------- 139
           +I Q + G      +++ G+VY +G   FG+    E   Q  K+                
Sbjct: 137 KIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSM 196

Query: 140 -PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
            PQ +ESL NI   Q A G  FT VLS +G+VYTF +     LG+ ++ N V    L+  
Sbjct: 197 LPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKD 256

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           L +I  V+I+AGY +  A+  Q     +Y+ G    G+LG+     +  P ++  F   N
Sbjct: 257 LNDI--VKISAGYSFCAAITKQGK---LYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN 311

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
              V V+ G    A + Q G++ TWG+G  G LGHGN+     P+ V+     K I +A 
Sbjct: 312 -SIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ--KIIKIAC 368

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G      ++ED  +Y FG G    LG   I     +  +   TP LV   K   ++VV +
Sbjct: 369 GGSHAAFITEDNQLYQFGRGSEGQLG---IGQNVASEASIRSTPNLVQYFK--GKQVVDV 423

Query: 379 SLTNSIYWNAHTFALTE 395
           +         HT A+T+
Sbjct: 424 TCGGE-----HTIAITQ 435



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 44/321 (13%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------------ 85
           E    ++  Q   G  H  AVT  G VY++G+   G+LGH   EEE +            
Sbjct: 131 EKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGH---EEELKQEQKIKIKRGNL 187

Query: 86  ----------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
                     P+ I SL  I+  Q A G   T+++S+ G+VY FG + +G   Y V    
Sbjct: 188 SHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY-VSDQN 246

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPH 193
            VT+PQL++ L +I  V+ + G  F A ++++G++YT  WGN  + +LG+       +P 
Sbjct: 247 SVTTPQLIKDLNDI--VKISAGYSFCAAITKQGKLYT--WGNNRNGQLGNSQSLYQTKPS 302

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            + G      +V ++ G  ++ AL  Q     +Y+ G G  G+LGHG+++D   PR +E 
Sbjct: 303 IVTGFGSQNSIVDVSCGDNFIAALTQQGQ---LYTWGFGGDGQLGHGNKSDLYAPRHVEF 359

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-----ECESVPKVVQAL 308
            Q +    + +A G  HAA + +D ++  +G G  G LG G          S P +VQ  
Sbjct: 360 KQKI----IKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYF 415

Query: 309 NDVKAIHVATGDYTTFVVSED 329
              + + V  G   T  ++++
Sbjct: 416 KGKQVVDVTCGGEHTIAITQE 436



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 167/372 (44%), Gaps = 48/372 (12%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           +VYS+G    GQLG       + P  I  L   +I +  AG   +M ++  G+VY++GK+
Sbjct: 50  IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--AR 180
             G   +  + +  +T P+ +E L    + Q + G F  A ++ +G VYT  WGN    +
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYT--WGNKEFGK 167

Query: 181 LGHHTEPNDVEPHPL------------------LGTLENIPVVQIAAGYCYLLALACQPS 222
           LGH  E    +   +                  + +L NI   Q+A G  + + L+    
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS---E 224

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              VY+ G    G LG+ S  +    P+LI+    +    V ++AG    A + + G++ 
Sbjct: 225 DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI----VKISAGYSFCAAITKQGKLY 280

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGES 340
           TWG  R G LG+     ++ P +V       +I  V+ GD     +++ G +Y++G G  
Sbjct: 281 TWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGD 340

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH   +D    RH             +  +++++I+   S     H   +TE  +LY
Sbjct: 341 GQLGHGNKSDLYAPRHV------------EFKQKIIKIACGGS-----HAAFITEDNQLY 383

Query: 401 AFGAGDKGQLGI 412
            FG G +GQLGI
Sbjct: 384 QFGRGSEGQLGI 395



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 111/277 (40%), Gaps = 91/277 (32%)

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR------------TDEK--------- 246
           A G+ Y   LA +     VYS G G  G+LG  +             TD+K         
Sbjct: 33  AGGFIYQSILANEYPETIVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKS 92

Query: 247 ---------------------------------HPRLIEQFQLLNLQPVVVAAGAWHAAV 273
                                             P  IE+  LL  +   ++ G +H A 
Sbjct: 93  ISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEK--LLGKKIKQISCGQFHMAA 150

Query: 274 VGQDGRVCTWGWGRYGCLGHGNE-------------------ECESVPKVVQALNDVKAI 314
           V +DG V TWG   +G LGH  E                   +   +P+ +++L ++KA 
Sbjct: 151 VTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAK 210

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+SEDG VY+FG  +  SLG+  ++D       +V TPQL+  L      
Sbjct: 211 QVACGIQFTVVLSEDGKVYTFGYNQYGSLGY--VSD-----QNSVTTPQLIKDLND---- 259

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +V+IS   S        A+T+ GKLY +G    GQLG
Sbjct: 260 IVKISAGYSF-----CAAITKQGKLYTWGNNRNGQLG 291



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V +WG+G +G LG  NE     P  ++ L D K   V  G   +  ++ +G+VYS+G  +
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH      +     N+  P+ +  L  + +++ QIS         H  A+TE G++
Sbjct: 111 GGILGH------EDRLSFNMTQPERIEKL--LGKKIKQISCG-----QFHMAAVTEDGEV 157

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           Y +G  + G+LG E    Q ++   +R ++
Sbjct: 158 YTWGNKEFGKLGHEEELKQEQKIKIKRGNL 187


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3758

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3759 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3816

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3817 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3872

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3873 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3932

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3933 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3984

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3985 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4029



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3727 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3786

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3787 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3844

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 3845 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3903

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 3904 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 3960

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3961 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4020

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4021 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4070

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4071 AGKLPA 4076



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 175/366 (47%), Gaps = 32/366 (8%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+S+G N   QLG    ++   P    +L  + ++Q A G+     ++ 
Sbjct: 2701 GLESAATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2760

Query: 113  AGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
             G+VYA G+ +   A   G+    +      + +L +  V + A+  G   T     +G+
Sbjct: 2761 EGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGK 2820

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +      P  L+  L+   +  IA G  +  AL    S   +Y+ 
Sbjct: 2821 VFSWGEGDDGKLGHFSR----MPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 2872

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V + G G 
Sbjct: 2873 GLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGD 2930

Query: 288  YGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
               +G G E   C ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH
Sbjct: 2931 LWKIGPGPEVKGC-NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2989

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
             +          +V  PQ+V  L+   +++V  S + ++    H  A+T+SG++YA+G  
Sbjct: 2990 GS--------DVHVRKPQVVEGLR--GKKIVACSCSGAL----HCLAVTDSGQVYAWGDN 3035

Query: 406  DKGQLG 411
            D GQ G
Sbjct: 3036 DHGQQG 3041



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2856 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2915

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V++ G     +   G +  K    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2916 ALTDEGLVFSLGDGDLWKIGPGPE-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY--LLALACQPSGMAV 226
             V+T+  G+  RLGH ++ +  +P      +E +   +I A  C   L  LA   SG  V
Sbjct: 2975 VVWTWGKGDYFRLGHGSDVHVRKPQ----VVEGLRGKKIVACSCSGALHCLAVTDSGQ-V 3029

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
            Y+ G    G+ G+G+ T  + P L++  +
Sbjct: 3030 YAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3058



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3748

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3749 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3807

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3808 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3867

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3868 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3914

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 3915 SWGDGDYGKLG 3925



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 28/305 (9%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQ-----LGHGTTEEEWRPRP---IRSLQG- 94
            N   +AG   S+ AVT +G VY+ G  +        +  GT      P P   I +L   
Sbjct: 2744 NVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTV-----PIPHGXITALSSY 2798

Query: 95   -IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
             ++ +   +G  +T      G+V+     S+GE + G  G      P+L+E+LK   +  
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVF-----SWGEGDDGKLG-HFSRMPRLIEALKTKRIRD 2852

Query: 154  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
             A G+  +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G   
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRD 2911

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
               LA    G+ V+S+G G   K+G G     K   + +  + LN Q V  +  GA  + 
Sbjct: 2912 AQTLALTDEGL-VFSLGDGDLWKIGPGPEV--KGCNIPQNIERLNGQGVCQIECGAQFSL 2968

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA-TGDYTTFVVSEDGD 331
             + + G V TWG G Y  LGHG++     P+VV+ L   K +  + +G      V++ G 
Sbjct: 2969 ALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028

Query: 332  VYSFG 336
            VY++G
Sbjct: 3029 VYAWG 3033



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 8/125 (6%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2952 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3006

Query: 95   IRIIQ-AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
             +I+  + +GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + +
Sbjct: 3007 KKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITR 3064

Query: 154  AAIGN 158
             A G+
Sbjct: 3065 VACGS 3069



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
            +G  H +AVT  G VY++G N  GQ G+GTT    +P  ++ L+G +I + A G+  ++
Sbjct: 3015 SGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3073


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4015

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4016 GA--GGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4073

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH +      P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4074 KLGHGSRSPCDRPR-VVESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4129

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4130 SDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4189

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  +++L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4190 KVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4241

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4242 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4286



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3984 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFI 4043

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P++VESL+ I VV  A
Sbjct: 4044 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVVESLRGIEVVDVA 4101

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEVLQGHRVVDVACGSGDAQ 4160

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  IE   L  L  V V  G+  +  + 
Sbjct: 4161 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLTGLGVVKVECGSQFSVALT 4217

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4218 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4277

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   + 
Sbjct: 4278 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPSS 4327

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4328 AGKLPA 4333



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 28/366 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG   S AV +K  V+ +G N   QLG     +   P    +L  + ++Q A G+     
Sbjct: 2952 AGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3009

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++  G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +
Sbjct: 3010 VTVEGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3068

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G+V+++  G+D +LGH +  N  +P  L+  L    +  IA G  +  AL    S   +Y
Sbjct: 3069 GKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALRAKRIRDIACGSSHSAALT---SSGELY 3124

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGW 285
            + G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG 
Sbjct: 3125 TWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
             +          +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  
Sbjct: 3243 GS--------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDN 3287

Query: 406  DKGQLG 411
            D GQ G
Sbjct: 3288 DHGQQG 3293



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +   VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLE--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G V+++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D++ + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L    ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPRLLEGLH--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L    V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPR-LLEGLHGKKVIDVAAGSTHCLAL 725



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2996 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3055

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+L+   +   A G+ 
Sbjct: 3056 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRAKRIRDIACGSS 3112

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3113 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3171

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3172 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3227

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3228 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3285



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3169

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3170 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3227

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3228 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3283

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3310



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G V+S+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLEVVKVRCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++PRL+E       + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3950 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4005

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4006 ADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4065

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHG+      P+VV++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4066 SWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV  L+    RVV ++  +    +A T  LT+   +++
Sbjct: 4126 RLGHSDSEDQ--------LKPKLVEVLQ--GHRVVDVACGSG---DAQTLCLTDDDTVWS 4172

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4173 WGDGDYGKLG 4182



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L    V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3205 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3259

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3260 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3317

Query: 155  AIGN 158
            A G+
Sbjct: 3318 ACGS 3321


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4006

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4007 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4064

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4065 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4120

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4121 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4180

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4181 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4232

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4233 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4277



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2945 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3004

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3005 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3063

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3064 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3119

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3120 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3177

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3178 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3236

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3237 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3282

Query: 409  QLG 411
            Q G
Sbjct: 3283 QQG 3285



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3975 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4034

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4035 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4092

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4093 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4151

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4152 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4208

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4209 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4268

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4269 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4318

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4319 AGKLPA 4324



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2988 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3047

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3048 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3104

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3105 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3163

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3164 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3219

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3220 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3277



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3161

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3162 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3219

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3220 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3275

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3302



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3996

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3997 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4055

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4056 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4115

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4116 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4162

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4163 SWGDGDYGKLG 4173



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3197 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3251

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3252 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3309

Query: 155  AIGN 158
            A G+
Sbjct: 3310 ACGS 3313


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4042

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4043 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4100

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4101 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4156

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4157 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4216

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4217 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4268

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4269 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4313



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 4011 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4070

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4071 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4128

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4129 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4187

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4188 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4244

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4245 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4304

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4305 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4354

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4355 AGKLPA 4360



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4032

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4033 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4091

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4092 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4151

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4152 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4198

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4199 SWGDGDYGKLG 4209



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 32/345 (9%)

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           P+R     R++  +AGA  ++ +     V  +G+   G+  +G    +L  SP ++ +L+
Sbjct: 12  PVR-----RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL--SPTILSTLE 64

Query: 148 NIFVVQAAIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            + ++    G   T   S     VY++ WG+  RLGH    +   P P+   L  + + Q
Sbjct: 65  GLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIR-QLHGLKIKQ 123

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           IA G  + LA+  +     V S G    G+LG G+  D   P+ I+ FQ + ++  +VAA
Sbjct: 124 IACGDSHCLAVTMEGQ---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIK--MVAA 178

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           GA H A V +DG +  WGWGRYG LG G+ +   VP+ V   +  K + VA G   T  V
Sbjct: 179 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISV 238

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G +Y++G  +   LGH   AD         L P  + +L+     + QIS      W
Sbjct: 239 SSSGGLYTYGWSKYGQLGHGDYADH--------LIPHQLEALQ--GSFISQISGG----W 284

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 431
             HT A+T  GKLY +G    GQ+G   V +  +R +P +V + L
Sbjct: 285 R-HTMAVTSDGKLYGWGWNKFGQVG---VGDNVDRSSPVQVKLPL 325



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 173/364 (47%), Gaps = 26/364 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  VV ++G    GQLGHG  ++   P  + +L+G+ II    GA  T+ 
Sbjct: 21  AGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIA 80

Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++   VY++G   FG   +G   + L T PQ +  L  + + Q A G+     ++ EG
Sbjct: 81  YSESHTDVYSWGWGDFGRLGHG-NSSDLFT-PQPIRQLHGLKIKQIACGDSHCLAVTMEG 138

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V ++    + +LG  T  + + P  +    + +P+  +AAG  +  A+        +Y 
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVPIKMVAAGAEHTAAVT---EDGELYG 194

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 287
            G G  G LG G R D   P   E+  L + + +V+ A  W H   V   G + T+GW +
Sbjct: 195 WGWGRYGNLGLGDRKDRLVP---EKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSK 251

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LGHG+     +P  ++AL       ++ G   T  V+ DG +Y +G  +    G   
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNK---FGQVG 308

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           + D       NV     V     + ++V+ IS      W  HT A+TE   ++++G G  
Sbjct: 309 VGD-------NVDRSSPVQVKLPLEQKVILISCG----WR-HTLAVTERQNVFSWGRGTN 356

Query: 408 GQLG 411
           GQLG
Sbjct: 357 GQLG 360



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 19/308 (6%)

Query: 49  IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           I G  H+IA + S   VYS+G    G+LGHG + + + P+PIR L G++I Q A G    
Sbjct: 72  ICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHC 131

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + ++  GQV ++G++  G+   G     LV  PQ +++ + + +   A G   TA ++ +
Sbjct: 132 LAVTMEGQVQSWGRNQNGQLGLGTTEDSLV--PQKIQAFQGVPIKMVAAGAEHTAAVTED 189

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 223
           G +Y + WG    LG     + + P  +     ++P    +V +A G+ + ++++   S 
Sbjct: 190 GELYGWGWGRYGNLGLGDRKDRLVPEKV-----SLPHGEKMVMVACGWRHTISVS---SS 241

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 282
             +Y+ G    G+LGHG   D   P  +E  Q   +  +   +G W H   V  DG++  
Sbjct: 242 GGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQI---SGGWRHTMAVTSDGKLYG 298

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WGW ++G +G G+    S P  V+   + K I ++ G   T  V+E  +V+S+G G +  
Sbjct: 299 WGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQ 358

Query: 343 LGHNAIAD 350
           LG+    D
Sbjct: 359 LGNGECTD 366



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 133/264 (50%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG GTTE+   P+ I++ QG+ I   AAGA  
Sbjct: 123 QIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEH 182

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G++Y +G   +G    G +  +LV  P+ V       +V  A G   T  +S 
Sbjct: 183 TAAVTEDGELYGWGWGRYGNLGLGDRKDRLV--PEKVSLPHGEKMVMVACGWRHTISVSS 240

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L+   + QI+ G+ + +A+    S   +
Sbjct: 241 SGGLYTYGWSKYGQLGHGDYADHLIPHQLE-ALQGSFISQISGGWRHTMAVT---SDGKL 296

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +L   Q V++ +  W H   V +   V +WG 
Sbjct: 297 YGWGWNKFGQVGVGDNVDRSSPV---QVKLPLEQKVILISCGWRHTLAVTERQNVFSWGR 353

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG+G     +VP +++AL+
Sbjct: 354 GTNGQLGNGECTDRNVPVIIKALS 377



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 44/81 (54%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  H++AVTS G +Y +G N  GQ+G G   +   P  ++     ++I  + G  
Sbjct: 278 SQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWR 337

Query: 106 RTMLISDAGQVYAFGKDSFGE 126
            T+ +++   V+++G+ + G+
Sbjct: 338 HTLAVTERQNVFSWGRGTNGQ 358


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4130

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4131 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4242

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4243 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 385 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 433

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 601

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 602 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 636



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4102

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4103 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4161

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4218

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4328

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4329 AGKLPA 4334



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 2959 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3018

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 3019 YACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3077

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 3078 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 3133

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 3134 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3191

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +     
Sbjct: 3192 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 3246

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3247 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3295



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 394 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 439

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 499

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 500 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 556

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 665

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 666 ----HCLALTEDSEVHSWGSNDQCQ 686



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2998 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3057

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3058 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3114

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3115 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3173

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3174 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3229

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3230 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3287



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 565 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 622

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 670



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3171

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3172 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3229

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3230 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3285

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3312



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 625

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 680

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 681 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 723



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4006

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4007 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4125

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4126 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4172

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4173 SWGDGDYGKLG 4183



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 676 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 715



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3207 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3261

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3262 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3319

Query: 155  AIGN 158
            A G+
Sbjct: 3320 ACGS 3323


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3707

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3708 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3765

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3766 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3821

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3822 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3881

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3882 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3933

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3934 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3978



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 2650 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2709

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 2710 YACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2768

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 2769 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 2824

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 2825 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2882

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +     
Sbjct: 2883 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 2937

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 2938 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 2986



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3676 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3735

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3736 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3793

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 3794 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3852

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 3853 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 3909

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3910 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3969

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 3970 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4019

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4020 AGKLPA 4025



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2689 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2748

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2749 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2805

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 2806 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2864

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2865 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2920

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2921 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2978



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 22/200 (11%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 442

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ YL ALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 443 QGLASRNIVKIAAHSDGHHYL-ALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 498

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 499 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 558

Query: 312 KAIHVA--TGDYTTFVVSED 329
           K I VA  +GD  T  V+E+
Sbjct: 559 KVIDVACGSGDAQTLAVTEN 578



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2862

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2863 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2920

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 2921 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 2976

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3003



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3641 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3697

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3698 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3756

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3757 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3816

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3817 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3863

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 3864 SWGDGDYGKLG 3874



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2898 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2952

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 2953 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3010

Query: 155  AIGN 158
            A G+
Sbjct: 3011 ACGS 3014



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 17/158 (10%)

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
           +D   P+L++     N+  +   +   H   +   G V +WG G  G LGHG+      P
Sbjct: 434 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 493

Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           KV+ A +  +A    +H+A G   +  ++ +G++Y++G G    LGH +  D        
Sbjct: 494 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 547

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
              P LV  LK +  +V+ ++  +    +A T A+TE+
Sbjct: 548 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTEN 578



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 24/183 (13%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 403 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 448

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 449 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 508

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 509 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 565

Query: 265 AAG 267
            +G
Sbjct: 566 GSG 568



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 520

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A G+
Sbjct: 521 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGS 567



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 39/55 (70%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G
Sbjct: 514 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 568



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 27/160 (16%)

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
           L NL    +A       ++ ++GRV T  +                P++VQ L     + 
Sbjct: 403 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQGLASRNIVK 452

Query: 316 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 371
           +A  +  +    ++  G+VYS+GCG+   LGH      +         P+++++   KQ 
Sbjct: 453 IAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE--------EPKVISAFSGKQA 504

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG
Sbjct: 505 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLG 539


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 172/369 (46%), Gaps = 41/369 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V S G + +GQLGH + +E   P  I  L G RIIQ  +G   ++ +S  G VY++G+  
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62

Query: 124 -----FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
                 G+   G      V  P L++SL++  +++ A GNF +  L+  G+VY   WG  
Sbjct: 63  EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVY--EWGQL 120

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG-MAVYSVGCGLGGK- 236
            RL       D++    L  +  +   +I        +++   SG    Y    G   K 
Sbjct: 121 HRLDESQSSLDIQSTNGLIEMPRLSSQRIIEA-----SVSQYLSGEKKAYDANGGTKPKD 175

Query: 237 ------LGHGSRTDEKHP-RLIEQFQLLNLQ------PVVVAAGAW-HAAVVGQDGRVCT 282
                   + +++  KH  ++I+  Q + +Q       VV  +G W  +A V + GR+ T
Sbjct: 176 DDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYT 235

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG+   G LG GN    S P++V+ L DV  + V  G      +++ G+VYS+G G    
Sbjct: 236 WGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQ 295

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH  +         + L P+ +    ++NER+ Q++  ++      T   +  G LYAF
Sbjct: 296 LGHGNV--------KSYLHPKKIQQFVELNERIAQVACGSNF-----TMVRSVQGLLYAF 342

Query: 403 GAGDKGQLG 411
           G G+ GQLG
Sbjct: 343 GHGEYGQLG 351



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 187/403 (46%), Gaps = 61/403 (15%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQL----GHGTTEEEW---RPRPIRSLQGIRIIQ 99
           Q ++G  HS+AV+  G VYS+G +  GQL    G+G +++     +P  I+SLQ  RII+
Sbjct: 38  QTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIK 97

Query: 100 AAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAA 155
            A G   ++ ++D G+VY +G   +    ++   +Q T  L+  P+L        +++A+
Sbjct: 98  VACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQR----IIEAS 153

Query: 156 IGNFFTAVLSREGRVYTFSWGNDAR------------------LGHHTEPNDVEPHPLLG 197
           +  +    LS E + Y  + G   +                  LG   + N   P     
Sbjct: 154 VSQY----LSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQ--- 206

Query: 198 TLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
            +++IP  VV ++ G+ +  + A   SG  +Y+ G    G+LG G+R     P+L++   
Sbjct: 207 -IQDIPEEVVDVSGGWAF--SAAVTKSG-RLYTWGFNEKGQLGLGNRWFHSTPQLVK--T 260

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 313
           L+++  V V  G  H   +   G V +WG G +G LGHGN +    PK +Q   ++  + 
Sbjct: 261 LIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERI 320

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTSLK 369
             VA G   T V S  G +Y+FG GE   LG       +  G  + H     P +V SL+
Sbjct: 321 AQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLE 380

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                     + N    + HT  +T+  ++Y +G G  G LG+
Sbjct: 381 TK-------KIKNVACGHLHTIVVTDENEVYQWGWGSSGALGL 416



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 160/357 (44%), Gaps = 65/357 (18%)

Query: 51  GPGHSIAVTSKGVVYSFG---------SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           G  HS+A+T  G VY +G         S+   Q  +G  E    PR    L   RII+A+
Sbjct: 101 GNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIE---MPR----LSSQRIIEAS 153

Query: 102 AG---AGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-----KLV----TSPQLVESLKNI 149
                +G        G       D   EA    Q       K++    T P  ++ +   
Sbjct: 154 VSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE- 212

Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPV 204
            VV  + G  F+A +++ GR+YT+ +    +LG      H+ P       L+ TL ++ +
Sbjct: 213 EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQ------LVKTLIDVNI 266

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V +  G  ++ A+  Q     VYS G G+ G+LGHG+     HP+ I+QF  LN +   V
Sbjct: 267 VSVVCGRQHICAITDQGE---VYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQV 323

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDV 311
           A G+    V    G +  +G G YG LG   EE +             S+P VV++L   
Sbjct: 324 ACGSNFTMVRSVQGLLYAFGHGEYGQLG-STEETQHLDFGGRDNHFKYSIPIVVKSLETK 382

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
           K  +VA G   T VV+++ +VY +G G S +L       G GN+    L PQL+TSL
Sbjct: 383 KIKNVACGHLHTIVVTDENEVYQWGWGSSGAL-------GLGNKRFQ-LVPQLITSL 431



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 21/267 (7%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  + G   +  ++ +G++Y +G +  G+   G+      ++PQLV++L ++ +V    
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQL--GLGNRWFHSTPQLVKTLIDVNIVSVVC 271

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLL 215
           G      ++ +G VY++  G   +LGH    + + P  +   +E N  + Q+A G  + +
Sbjct: 272 GRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTM 331

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTD-------EKH-----PRLIEQFQLLNLQPVV 263
             + Q  G+ +Y+ G G  G+LG    T        + H     P +++  +   ++ V 
Sbjct: 332 VRSVQ--GL-LYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNV- 387

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            A G  H  VV  +  V  WGWG  G LG GN+  + VP+++ +L+  +   +  G+  T
Sbjct: 388 -ACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHT 446

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
            VV    DV SF     + +     AD
Sbjct: 447 IVV-RCSDVTSFAYDYKSLINEKKYAD 472



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGAG 105
            + G  H  A+T +G VYS+G    GQLGHG  +    P+ I+    +  RI Q A G+ 
Sbjct: 269 VVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSN 328

Query: 106 RTMLISDAGQVYAFGKDSFGE---------AEYGVQGTKLVTS-PQLVESLKNIFVVQAA 155
            TM+ S  G +YAFG   +G+          ++G +      S P +V+SL+   +   A
Sbjct: 329 FTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVA 388

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G+  T V++ E  VY + WG+   LG   +   + P  L+ +L    +  I AG  + +
Sbjct: 389 CGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQ-LITSLSGEEIASITAGEKHTI 447

Query: 216 ALAC 219
            + C
Sbjct: 448 VVRC 451



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   S AVT  G +Y++G N  GQLG G       P+ +++L  + I+    G      I
Sbjct: 220 GWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAI 279

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREG 168
           +D G+VY++G   FG+  +G    K    P+ ++     N  + Q A G+ FT V S +G
Sbjct: 280 TDQGEVYSWGLGVFGQLGHG--NVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQG 337

Query: 169 RVYTFSWGNDARLGHHTEPNDVE----------PHPL-LGTLENIPVVQIAAGYCYLLAL 217
            +Y F  G   +LG   E   ++            P+ + +LE   +  +A G+ + + +
Sbjct: 338 LLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             +     VY  G G  G LG G++  +  P+LI    L   +   + AG  H  VV
Sbjct: 398 TDENE---VYQWGWGSSGALGLGNKRFQLVPQLIT--SLSGEEIASITAGEKHTIVV 449



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           M+V SVG    G+LGH S  +   P +IE   LL  + +   +G  H+  V + G V +W
Sbjct: 1   MSVLSVGQSKNGQLGHDSIKECLEPTVIE--GLLGKRIIQTVSGEAHSLAVSRFGDVYSW 58

Query: 284 GWGRYGCLGH-----GNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G  + G LG      G+++   V  P ++++L   + I VA G++ +  +++ G VY +G
Sbjct: 59  GRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--------------PRPIRS 91
           +Q   G   ++  + +G++Y+FG    GQL  G+TEE                 P  ++S
Sbjct: 321 AQVACGSNFTMVRSVQGLLYAFGHGEYGQL--GSTEETQHLDFGGRDNHFKYSIPIVVKS 378

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           L+  +I   A G   T++++D  +VY +G  S G    G +  +LV  PQL+ SL    +
Sbjct: 379 LETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLV--PQLITSLSGEEI 436

Query: 152 VQAAIGNFFTAVLSREGRVYTFSW 175
                G   T V+ R   V +F++
Sbjct: 437 ASITAGEKHTIVV-RCSDVTSFAY 459


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4018

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4019 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4076

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4077 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4132

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4133 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4192

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4193 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4244

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4245 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 445 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 493

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 494 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 549

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 550 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 609

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 610 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 661

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 662 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 696



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 2955 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3014

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 3015 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3073

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ 
Sbjct: 3074 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3129

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G 
Sbjct: 3130 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3187

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3188 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3247

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3248 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3292

Query: 408  GQLG 411
            GQ G
Sbjct: 3293 GQQG 3296



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3987 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4046

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4047 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4104

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4105 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4163

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4164 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4220

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4221 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4280

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4281 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4330

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4331 AGKLPA 4336



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 454 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 499

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 500 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 559

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 560 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 616

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 617 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 676

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 677 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 725

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 726 ----HCLALTEDSEVHSWGSNDQCQ 746



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2999 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3058

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3059 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3115

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3116 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3174

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3175 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3230

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3231 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3288



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 565 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 624

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 625 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 682

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 683 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 730



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3172

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3173 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3230

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3231 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3286

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3313



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 571

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 572 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 629

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 630 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 685

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 686 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 740

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 741 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 783



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3953 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4008

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4009 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4068

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4069 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4129 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4175

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4176 WGDGDYGKLG 4185



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 618 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 735

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L++  +V IA G
Sbjct: 736 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 775



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3208 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3262

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3263 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3320

Query: 155  AIGN 158
            A G+
Sbjct: 3321 ACGS 3324


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4015

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4016 GA--GGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4073

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4074 KLGHGNRSPCDRPR-VVESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4129

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4130 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4189

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4190 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4241

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4242 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4286



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3984 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFI 4043

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P++VESL+ I VV  A
Sbjct: 4044 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGIEVVDVA 4101

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4160

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4161 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4217

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4218 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4277

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 4278 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPTS 4327

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4328 TGKLPA 4333



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V Q A       +LSR GRVYT ++ +DA          + P  L+
Sbjct: 440 VIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDA----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E +P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2952 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3011

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3012 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3070

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G
Sbjct: 3071 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3126

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3127 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3184

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3185 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3243

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3244 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3289

Query: 409  QLG 411
            Q G
Sbjct: 3290 QQG 3292



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S +G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LASLGVTQIACAEKRFLILSRSGRVYTQAYNSDAL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2995 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3054

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3055 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3111

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3112 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3170

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3171 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3226

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3227 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3284



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3168

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3169 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3226

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3227 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3282

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3283 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3309



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +++  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEVI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3950 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT--- 4005

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4006 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVY 4065

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+VV++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4066 SWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4126 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4172

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4173 WGDGDYGKLG 4182



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)

Query: 24  GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
           G S   V+  L+AG    +  +    +G   ++AVT  G V+S+G    G+LG G ++  
Sbjct: 587 GSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 84  WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
             P+ I  LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
           E L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+  
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTK 762

Query: 203 PVVQIAAG 210
            +V IA G
Sbjct: 763 HIVGIACG 770



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3204 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3258

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3259 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3316

Query: 155  AIGN 158
            A G+
Sbjct: 3317 ACGS 3320


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4239

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4240 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ 
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G 
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287

Query: 408  GQLG 411
            GQ G
Sbjct: 3288 GQQG 3291



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4215

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4326 AGKLPA 4331



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4003

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4124 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4170

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4171 WGDGDYGKLG 4180



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L++  +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R IQ   G      ++  G++YA G 
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGY 3902

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3903 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3960

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3961 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4016

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4017 SDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4076

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4077 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4128

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4129 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4173



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3871 EALATLRPIQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3930

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3931 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3988

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 3989 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEVLQGHRVVDIACGSGDAQ 4047

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4048 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4104

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4105 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4164

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4165 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4214

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4215 AGKLPA 4220



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTLPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 169  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 228  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 347  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 407  KGQLG 411
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 23/252 (9%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPL--LGTLENIPVVQIAAGYCYLLALAC 219
            LS  G    + WG++ R  LG         P P   L TL  I   Q+  G   L A+  
Sbjct: 3837 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPI---QLIGGEQTLFAVT- 3892

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G 
Sbjct: 3893 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3950

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G 
Sbjct: 3951 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4010

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
               LGH+   D         L P+LV  L+    RVV I+  +    +A T  LT+   +
Sbjct: 4011 YGRLGHSDSEDQ--------LKPKLVEVLQ--GHRVVDIACGSG---DAQTLCLTDDDTV 4057

Query: 400  YAFGAGDKGQLG 411
            +++G GD G+LG
Sbjct: 4058 WSWGDGDYGKLG 4069



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTF 173
             V+T+
Sbjct: 3226 VVWTW 3230



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 14/245 (5%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G  + G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTW 283
             V TW
Sbjct: 3226 VVWTW 3230



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287

Query: 409  QLG 411
            Q G
Sbjct: 3288 QQG 3290



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4324 AGKLPA 4329



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314

Query: 155  AIGN 158
            A G+
Sbjct: 3315 ACGS 3318


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4239

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4240 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4215

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4326 AGKLPA 4331



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +   L    S   +Y+ 
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTW 3124

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G 
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287

Query: 408  GQLG 411
            GQ G
Sbjct: 3288 GQQG 3291



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H   LTE  +++++G+ D+ Q
Sbjct: 721 ----HCLVLTEDSEVHSWGSNDQCQ 741



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+++LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIQALKTKRIRDIAYGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + L L
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLVL 725



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 23/252 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H  V+ +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLVLTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECE 299
                  N++C+
Sbjct: 736 ------SNDQCQ 741



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS  +TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG+   G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4003

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4124 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4170

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4171 WGDGDYGKLG 4180



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+    VL+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P     L++  +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 770



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3955 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4012

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  + VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4013 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4068

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L++  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4069 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4128

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4129 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4180

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4181 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4225



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A + +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G++
Sbjct: 2916 AASIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 2975

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++ 
Sbjct: 2976 YACGEATNGRLGLGL-SSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3034

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  
Sbjct: 3035 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEY 3090

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 3091 GRLGHGDNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3148

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH       
Sbjct: 3149 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT----- 3203

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3204 ---DVHVRKPQIVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3252



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3923 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3982

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ + VV  A
Sbjct: 3983 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4040

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ +A G     
Sbjct: 4041 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4099

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L      M V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4100 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4156

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4157 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4216

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 4217 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 4266

Query: 396  SGKLYA 401
            +GK+ A
Sbjct: 4267 AGKMPA 4272



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 34/290 (11%)

Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +G+ G KL   V  P   ++L +  V Q         +LSR G VYT ++ +        
Sbjct: 379 WGLLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYKS-------- 430

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
               + P  L+  L +  +V++AA       LA   SG  VYS GCG GG+LGHG  T  
Sbjct: 431 --TTLAPM-LIHGLSSRKIVKLAAHPDGQHFLALSTSG-EVYSWGCGDGGRLGHGDATYL 486

Query: 246 KHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           + P LI  F  +    Q V +A G+ ++A V  DG + TWG G YG LGHG+ E  + P 
Sbjct: 487 EEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPM 546

Query: 304 VVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           +V AL   K + VA  +GD  T  V+E+G V+S+G G+   LG    +DG         T
Sbjct: 547 LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKT 598

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           P+LV  L+ ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 599 PKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 641



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 160/342 (46%), Gaps = 39/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
           P   ++L    + Q        +++S +G VY              Q  K  T +P L+ 
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVY-------------TQNYKSTTLAPMLIH 439

Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 198
            L +  +V+ A    G  F A LS  G VY++  G+  RLGH       EP  +    G 
Sbjct: 440 GLSSRKIVKLAAHPDGQHFLA-LSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGK 498

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VVQIA G  Y  A+    +   +Y+ G G  G+LGHGS  D   P L+   +   
Sbjct: 499 QTGKQVVQIACGSTYSAAVT---ADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQK 555

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  
Sbjct: 556 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 615

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VY++G G++  LGH            +V  P+L+ SL+   ++VV I
Sbjct: 616 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRYPKLLDSLQ--GKKVVDI 665

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           ++ ++     H  ALT+ G+++++G+ DK Q    L  N+ +
Sbjct: 666 AVGST-----HCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQ 702



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G +Y+ G  ++G+LG G +    + PR I +L    ++ +  
Sbjct: 2955 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAV 3014

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3015 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3072

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +Y++  G   RLGH      + P  L+  L    V+Q+A G      LA  
Sbjct: 3073 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3131

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3132 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3187

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P++V+ L   K +HVA G      V++ G VY++G
Sbjct: 3188 VWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3244



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 109/173 (63%), Gaps = 5/173 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
           Q   G  +S AVT+ G +Y++G  + G+LGHG++E+   P  + +L+G +++  A G+G 
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565

Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            +T+ +++ GQV+++G   +G  + G  G+    +P+LVE L+++ +V+   G+ F+  L
Sbjct: 566 AQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 623

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +++G+VYT+  G++ RLGH T+ +   P  LL +L+   VV IA G  + LAL
Sbjct: 624 TKDGQVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGKKVVDIAVGSTHCLAL 675



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 3016 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3075

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y++G   +G   +G   T+L   P+LV+ L    V+Q A G  +  T  L+ E
Sbjct: 3076 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3133

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 3134 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3185

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 3186 GV-VWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3242

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3279



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 18/282 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ----GIRIIQAAAGAGRTML 109
           H +A+++ G VYS+G    G+LGHG       P  I +      G +++Q A G+  +  
Sbjct: 457 HFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAA 516

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           ++  G++Y +G+ ++G   +G   ++ VT+P LV +LK   VV  A   G+  T  ++  
Sbjct: 517 VTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTEN 574

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 575 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 630

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHG+    ++P+L++  Q    + V +A G+ H   +  +G V +WG   
Sbjct: 631 TWGKGDNQRLGHGTDEHVRYPKLLDSLQ--GKKVVDIAVGSTHCLALTDEGEVHSWGSND 688

Query: 288 YGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              L H +     +  PK +  LN    + ++ G   +F  S
Sbjct: 689 K--LQHFDTLFPNKKQPKALPGLNSKHIVGISCGPGQSFAWS 728



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 3944

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3945 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4003

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 4004 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4063

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 4064 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 4110

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4111 SWGDGDYGKLG 4121



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ +  LQ + I++   G+  ++ 
Sbjct: 563 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  GQVY +GK   G+ +    GT + V  P+L++SL+   VV  A+G+     L+ EG
Sbjct: 623 LTKDGQVYTWGK---GDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEG 679

Query: 169 RVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAG 210
            V+  SWG++ +L H     PN  +P  L G L +  +V I+ G
Sbjct: 680 EVH--SWGSNDKLQHFDTLFPNKKQPKALPG-LNSKHIVGISCG 720



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3164 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG 3218

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3219 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3276

Query: 155  AIGN 158
            A G+
Sbjct: 3277 ACGS 3280


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 171/357 (47%), Gaps = 23/357 (6%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G +  +G N  GQLG     +   P P  +L  +R IQ   G      ++  G+VYA G 
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGY 640

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
            +      G+ GT  V+ P L+ESL+++F+ +  +  G      LS EG VY++  G+D 
Sbjct: 641 GA--GGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDG 698

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH  + +   P  ++ +L    VV +A G  +    AC  +   +Y+ G G  G+LGH
Sbjct: 699 KLGHGNKSSCERPR-VIESLRGKEVVDVACGGAHS---ACITASGELYTWGKGRYGRLGH 754

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G   D+  P+ +E      ++ V   +G      V  D  V +WG G YG LG G  +  
Sbjct: 755 GDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGC 814

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  V  L  +  I V  G   +  ++  G VY++G G+   LGH            +V
Sbjct: 815 KVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGT--------DDHV 866

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
             P+ V +L+   ++V+ I++      + H  A T++G++Y +G  D+GQLG   VN
Sbjct: 867 RRPKRVAALQ--GKKVICIAVG-----SLHCVACTDTGEVYTWGDNDEGQLGDGTVN 916



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 16/343 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
           Q + G     AVT+ G VY+ G  + G+LG G T+    P  + SLQ + I +    +G 
Sbjct: 618 QVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGG 677

Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + +S  G+VY++G+   G+  +G + +     P+++ESL+   VV  A G   +A +
Sbjct: 678 KHCLALSAEGEVYSWGEGDDGKLGHGNKSS--CERPRVIESLRGKEVVDVACGGAHSACI 735

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G +YT+  G   RLGH    + + P   +  L    V  +A G      L C     
Sbjct: 736 TASGELYTWGKGRYGRLGHGDSDDQLRPKK-VEALSGWRVRCVACGSGDAQTL-CVTDDD 793

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+S G G  GKLG G     K P  ++  Q + +  + V  G+  +  +   G V TWG
Sbjct: 794 CVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGV--IRVECGSQFSVALTASGSVYTWG 851

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G Y  LGHG ++    PK V AL   K I +A G       ++ G+VY++G  +   LG
Sbjct: 852 KGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLG 911

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
                DG  N    +  P+LV +L+      V     +++ W+
Sbjct: 912 -----DGTVN---AIHKPRLVAALQGKKINRVSCGSAHTVAWS 946



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 12/292 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H +A++++G VYS+G    G+LGHG      RPR I SL+G  ++  A G   +  
Sbjct: 675 SGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSAC 734

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFTAVLSRE 167
           I+ +G++Y +GK  +G   +G    +L   P+ VE+L    +  V    G+  T  ++ +
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQL--RPKKVEALSGWRVRCVACGSGDAQTLCVTDD 792

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             V+++  G+  +LG     +D    PL +  L+ + V+++  G  + +AL    S   V
Sbjct: 793 DCVWSWGDGDYGKLGRGG--SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGS---V 847

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y+ G G   +LGHG+    + P+ +   Q    + + +A G+ H       G V TWG  
Sbjct: 848 YTWGKGDYHRLGHGTDDHVRRPKRVAALQ--GKKVICIAVGSLHCVACTDTGEVYTWGDN 905

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
             G LG G       P++V AL   K   V+ G   T   S      +  CG
Sbjct: 906 DEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWSTCNPSTAGACG 957



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 8/215 (3%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +E      G  HS  +T+ G +Y++G    G+LGHG ++++ RP+ + +L G R+   A 
Sbjct: 720 KEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVAC 779

Query: 103 GAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           G+G  +T+ ++D   V+++G   +G  + G  G+     P  V+ L+ + V++   G+ F
Sbjct: 780 GSGDAQTLCVTDDDCVWSWGDGDYG--KLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQF 837

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +  L+  G VYT+  G+  RLGH T+ +   P   +  L+   V+ IA G   L  +AC 
Sbjct: 838 SVALTASGSVYTWGKGDYHRLGHGTDDHVRRPK-RVAALQGKKVICIAVG--SLHCVACT 894

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
            +G  VY+ G    G+LG G+      PRL+   Q
Sbjct: 895 DTG-EVYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
           ++R    +T SWG    +      H  +   VE      P P    L  +  +Q+  G  
Sbjct: 566 VNRRPEDWTLSWGWSGTILGWGHNHRGQLGGVEGAKVKLPMP-CEALSALRPIQVVGGEQ 624

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            L A+    +   VY+ G G GG+LG G       P L+E  Q + ++ VVV +G  H  
Sbjct: 625 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCL 681

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            +  +G V +WG G  G LGHGN+     P+V+++L   + + VA G   +  ++  G++
Sbjct: 682 ALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGEL 741

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           Y++G G    LGH   +D Q       L P+ V +L     R V          +A T  
Sbjct: 742 YTWGKGRYGRLGHGD-SDDQ-------LRPKKVEALSGWRVRCVACG-----SGDAQTLC 788

Query: 393 LTESGKLYAFGAGDKGQLG 411
           +T+   ++++G GD G+LG
Sbjct: 789 VTDDDCVWSWGDGDYGKLG 807


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4079

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4080 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4137

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4138 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4193

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4194 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4253

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4305

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4306 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4350



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 508 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 556

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 557 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 612

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 613 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 672

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 673 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 724

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 725 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 759



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 3016 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3075

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 3076 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3134

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ 
Sbjct: 3135 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3190

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G 
Sbjct: 3191 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3248

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3249 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3308

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3309 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3353

Query: 408  GQLG 411
            GQ G
Sbjct: 3354 GQQG 3357



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 4048 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4107

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4165

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4166 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4224

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4225 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4281

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4282 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4341

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4342 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4391

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4392 AGKLPA 4397



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 517 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 562

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 563 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 622

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 623 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 679

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 680 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 739

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 740 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 788

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 789 ----HCLALTEDSEVHSWGSNDQCQ 809



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 3060 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3119

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3120 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3176

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3177 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3235

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3236 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3291

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3292 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3349



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 628 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 687

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 688 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 745

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 746 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 793



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3233

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3234 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3291

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3292 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3347

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3374



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 634

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 635 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 692

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 693 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 748

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 749 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 803

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 804 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 846



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4069

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4070 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4128

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4188

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4189 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4235

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4236 SWGDGDYGKLG 4246



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 681 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 798

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L++  +V IA G
Sbjct: 799 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 838



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3269 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3323

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3324 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3381

Query: 155  AIGN 158
            A G+
Sbjct: 3382 ACGS 3385


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3957 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4015 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4070

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4071 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4130

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4131 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4182

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4183 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4227



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 2893 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2952

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 2953 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3011

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ 
Sbjct: 3012 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3067

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G 
Sbjct: 3068 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3125

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3126 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3185

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3186 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3230

Query: 408  GQLG 411
            GQ G
Sbjct: 3231 GQQG 3234



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 385 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 433

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 601

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 602 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 636



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3925 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3984

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3985 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4042

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4101

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4102 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4158

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4159 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4218

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4219 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4268

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4269 AGKLPA 4274



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 394 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 439

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 499

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 500 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 556

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 616

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 665

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 666 ----HCLALTEDSEVHSWGSNDQCQ 686



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2937 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2996

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2997 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3053

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3054 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3112

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3113 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3168

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3169 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3226



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 565 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 622

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 670



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3110

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3111 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3168

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3169 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3224

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3251



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 625

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 680

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 681 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 723



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3891 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 3946

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3947 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4006

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4007 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4067 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4113

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4114 WGDGDYGKLG 4123



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 676 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3146 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3200

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3201 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3258

Query: 155  AIGN 158
            A G+
Sbjct: 3259 ACGS 3262


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  134 bits (336), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 50/388 (12%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLIS 111
            H   ++S G ++++G+NS GQLGHG    +++  PR + + +   II  + G   ++ + 
Sbjct: 1043 HIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVD 1102

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVLSRE 167
             + Q+Y++G   +G+  +GV     +T   L + +++      V+  A G   T VL + 
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGV-----LTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKS 1157

Query: 168  GRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G ++TF W +  +LG     +   P  +E   ++G +    +  IAAG+ +  ++ C  +
Sbjct: 1158 GDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVG-IHGERITAIAAGHSH--SIMCLDN 1214

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
            G  +YS G    G+LGHG+      P+ I++   L  +P++ ++ G +H   + +   V 
Sbjct: 1215 G-DIYSWGANSKGQLGHGNIEKSLRPKQIDE---LKGKPIIKISCGHFHTVAISELNSVY 1270

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV------SEDGDVYSF 335
             WG G + CLG+G+ + E  PK+++   + K   V  G Y T  V      S+ G+VY  
Sbjct: 1271 CWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYIC 1330

Query: 336  GCGESASLGHNAIADGQGNRHANVLT---PQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            G GE   LG        G+          P ++ SL  +N  +V  S  +       +  
Sbjct: 1331 GGGEHGKLGTG------GDLKTPFFDKPHPAVIPSLNSMN--IVGFSSGSEF-----SAI 1377

Query: 393  LTESGKLYAFGAGDKGQLGIELVNNQTE 420
            +T +G LY +G G+ GQ+G    N +TE
Sbjct: 1378 ITNNGALYTWGYGNFGQIG----NGKTE 1401



 Score =  107 bits (266), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 25/317 (7%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTML 109
            G  HS+AV     +YS+GS+  GQLGHG    +  P+ I     G +++  A G   TM+
Sbjct: 1094 GGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMV 1153

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-----FVVQAAIGNFFTAVL 164
            +  +G ++ FG +  G  + G+   K    P  +E+ + +      +   A G+  + + 
Sbjct: 1154 LKKSGDLFTFGWNDSG--QLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMC 1211

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
               G +Y++   +  +LGH      + P   +  L+  P+++I+ G+ + +A++   S  
Sbjct: 1212 LDNGDIYSWGANSKGQLGHGNIEKSLRPKQ-IDELKGKPIIKISCGHFHTVAISELNS-- 1268

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----GQD-G 278
             VY  G G    LG+GS  +E  P++IE F  +N +   V  G +H A V     G D G
Sbjct: 1269 -VYCWGQGEHMCLGNGSNKNELSPKMIEFF--INKKIEKVVCGLYHTATVTAAENGSDRG 1325

Query: 279  RVCTWGWGRYGCLGHGNEECESV-----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
             V   G G +G LG G +          P V+ +LN +  +  ++G   + +++ +G +Y
Sbjct: 1326 NVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385

Query: 334  SFGCGESASLGHNAIAD 350
            ++G G    +G+    D
Sbjct: 1386 TWGYGNFGQIGNGKTED 1402



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 84/328 (25%), Positives = 158/328 (48%), Gaps = 33/328 (10%)

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            + +  A G     +IS  G+++ +G +S G+  +G+   K  ++P+ VE+ K+  ++  +
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092

Query: 156  IGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI----PVVQIAA 209
             G   +  + +  ++Y  SWG+    +LGH      + P  L   +E+      V+ IA 
Sbjct: 1093 CGGEHSVAVDQSFQIY--SWGSSRYGQLGHGV----LTPQNLPKKIEDFTGGQKVLAIAT 1146

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---VVVAA 266
            GY + + L  + SG  +++ G    G+LG G+  +   P  IE  +++ +       +AA
Sbjct: 1147 GYAHTMVL--KKSG-DLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAA 1203

Query: 267  GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            G  H+ +   +G + +WG    G LGHGN E    PK +  L     I ++ G + T  +
Sbjct: 1204 GHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAI 1263

Query: 327  SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
            SE   VY +G GE   LG+ +        + N L+P+++     +N+++ ++     +Y 
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGS--------NKNELSPKMIEFF--INKKIEKV--VCGLYH 1311

Query: 387  NAHTFAL---TESGKLYAFGAGDKGQLG 411
             A   A    ++ G +Y  G G+ G+LG
Sbjct: 1312 TATVTAAENGSDRGNVYICGGGEHGKLG 1339



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HSI     G +YS+G+NS GQLGHG  E+  RP+ I  L+G  II+ + G   T+ 
Sbjct: 1203 AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVA 1262

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
            IS+   VY +G+        G    +L  SP+++E   N  + +   G + TA +     
Sbjct: 1263 ISELNSVYCWGQGEHMCLGNGSNKNEL--SPKMIEFFINKKIEKVVCGLYHTATVTAAEN 1320

Query: 165  -SREGRVYTFSWGNDARLGHHTE---PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALAC 219
             S  G VY    G   +LG   +   P   +PHP ++ +L ++ +V  ++G  +    A 
Sbjct: 1321 GSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEF---SAI 1377

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----EQFQLLN 258
              +  A+Y+ G G  G++G+G   D   P  I    ++F L N
Sbjct: 1378 ITNNGALYTWGYGNFGQIGNGKTEDMWLPTKISLNDQRFMLFN 1420



 Score = 43.1 bits (100), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 15/111 (13%)

Query: 301  VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            +P +V+  N+ KA+ VA G     V+S DG+++++G      LGH        N      
Sbjct: 1024 MPPLVK--NEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGL------NVGKYQS 1075

Query: 361  TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            TP+ V + K  +  ++ IS         H+ A+ +S ++Y++G+   GQLG
Sbjct: 1076 TPRRVETFK--SSPIIMISCGGE-----HSVAVDQSFQIYSWGSSRYGQLG 1119


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3300

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3301 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3358

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3359 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3414

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3415 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3474

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3475 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3526

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3527 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3571



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2239 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2298

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 2299 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2357

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 2358 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2413

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 2414 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2471

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 2472 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 2530

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 2531 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 2576

Query: 409  QLG 411
            Q G
Sbjct: 2577 QQG 2579



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 178/368 (48%), Gaps = 22/368 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3269 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3328

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3329 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3386

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 3387 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3445

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 3446 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 3502

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 3503 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3562

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 393
            G  +   LG     DG  N    +  P+LV +L  K+VN   V     +++ W+    A 
Sbjct: 3563 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNR--VACGSAHTLAWSTSKPA- 3611

Query: 394  TESGKLYA 401
              +GKL A
Sbjct: 3612 -SAGKLPA 3618



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2282 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2341

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2342 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2398

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 2399 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2457

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2458 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2513

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2514 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 2571



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2455

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2456 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2513

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 2514 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 2569

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGLE 2596



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3235 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 3290

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3291 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3350

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 3351 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 3411 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 3457

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 3458 WGDGDYGKLG 3467



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2491 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2545

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 2546 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2603

Query: 155  AIGN 158
            A G+
Sbjct: 2604 ACGS 2607


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4239

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4240 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4215

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4326 AGKLPA 4331



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 178/357 (49%), Gaps = 26/357 (7%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+VY+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G
Sbjct: 3017 CGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+
Sbjct: 3076 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 3131

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +       
Sbjct: 3190 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS------- 3242

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3243 -DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4003

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4124 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4170

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4171 WGDGDYGKLG 4180



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3923

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3924 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3981

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3982 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4037

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4038 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4097

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4098 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4149

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4150 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4194



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 350 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 398

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 399 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 454

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 455 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 514

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 515 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 566

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 567 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 601



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3892 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3951

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3952 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4009

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4010 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4068

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4069 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4125

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4126 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4185

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4186 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4235

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4236 AGKLPA 4241



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 26/364 (7%)

Query: 52   PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
            PG     T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++
Sbjct: 2860 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2919

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
              G+VY+ G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+
Sbjct: 2920 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2978

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+++  G+D +LGH +  N  +P  L+  L+   +  IA G  +   L    S   +Y+ 
Sbjct: 2979 VFSWGEGDDGKLGHFSRMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTW 3034

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
            G G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G 
Sbjct: 3035 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3092

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            +G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +
Sbjct: 3093 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3152

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D 
Sbjct: 3153 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3197

Query: 408  GQLG 411
            GQ G
Sbjct: 3198 GQQG 3201



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+ L  +
Sbjct: 359 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 404

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 464

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 465 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 521

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  G   + 
Sbjct: 522 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 630

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H   LTE  +++++G+ D+ Q
Sbjct: 631 ----HCLVLTEDSEVHSWGSNDQCQ 651



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VYS G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2904 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2963

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+++LK   +   A G+ 
Sbjct: 2964 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIQALKTKRIRDIAYGSS 3020

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3021 HSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3079

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3080 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3135

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3136 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3193



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ V++   G+ F+  L+++G
Sbjct: 530 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 587

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + L L
Sbjct: 588 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLVL 635



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 23/252 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 534

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ V+++  G  + +AL        VY
Sbjct: 535 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 590

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H  V+ +D  V +WG   
Sbjct: 591 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLVLTEDSEVHSWG--- 645

Query: 288 YGCLGHGNEECE 299
                  N++C+
Sbjct: 646 ------SNDQCQ 651



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS  +TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3077

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3078 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3135

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3136 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3191

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3218



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3858 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 3913

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3914 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3973

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 3974 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4034 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4080

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4081 WGDGDYGKLG 4090



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +I+   G+  ++ 
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+    VL+ +  
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P     L++  +V IA G
Sbjct: 641 VH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 680



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3113 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3167

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3168 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3225

Query: 155  AIGN 158
            A G+
Sbjct: 3226 ACGS 3229


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 190/442 (42%), Gaps = 81/442 (18%)

Query: 3   QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK- 61
           Q R  F+   E E +DL +KC  SW                          +S+    K 
Sbjct: 47  QSRKKFEEY-EQEGEDLMEKCMMSWP-----------------------NKYSLDQIKKY 82

Query: 62  -GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
              V+SFG N+ G+LG G   E   P  +R L  +++I  ++G   + L+++ G+++  G
Sbjct: 83  HAYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCG 142

Query: 121 K---DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG- 176
               D  G  E    G+K    P  VE L  IF+ Q A G++ T  LS+EG+VY   WG 
Sbjct: 143 SNLHDKLG-LEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYV--WGG 197

Query: 177 --NDARLGHHTEPNDVEPHP--LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
             ++ R     E  D   +   LL +     + QI  G  + LAL        +YS G G
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLAL---DDNGTLYSWGVG 254

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+ GHG   D++ P+ I+ F    +    + AG  H   +  D +V  WG GRYG  G
Sbjct: 255 EKGECGHGKFEDQETPQRIKFFDGKII--TQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312

Query: 293 HGNEECESVPKVVQ---------ALNDV-------------KAIHVATGDYTTFVVSEDG 330
            G  E  ++P++V           L+D              K   +A G+  T V++  G
Sbjct: 313 FGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG 372

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++SFG  +   LGHN +         N   P+LV  +  +N + VQ++   +     H+
Sbjct: 373 QIFSFGYNQQGQLGHNTV--------DNYCRPKLVEGM--LNHKTVQVAAGRN-----HS 417

Query: 391 FALTESGKLYAFGAGDKGQLGI 412
             LT    +YA G    GQ G+
Sbjct: 418 LCLTNKNDVYACGNNQYGQCGL 439



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 31/275 (11%)

Query: 20  KQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
           ++K    +K VL    AG+        Q   G  HS+A+   G +YS+G    G+ GHG 
Sbjct: 209 ERKDNAKYKPVLLQSFAGKKI-----KQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGK 263

Query: 80  TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGT---K 135
            E++  P+ I+   G  I Q  AG   T+ I+   QVYA+G   +G+  +G  + T   +
Sbjct: 264 FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQ 323

Query: 136 LVTSP---------------QLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           LV  P               +++E  K+   + Q A G   T VL+  G++++F +    
Sbjct: 324 LVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQG 383

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH+T  N   P  + G L N   VQ+AAG  + L   C  +   VY+ G    G+ G 
Sbjct: 384 QLGHNTVDNYCRPKLVEGML-NHKTVQVAAGRNHSL---CLTNKNDVYACGNNQYGQCGL 439

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             R  E          LL++    + AG +H+ VV
Sbjct: 440 PDR--EMRKTFSHVLSLLSVNSFKLYAGGFHSWVV 472



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 41/325 (12%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V++FG+++ GE   G      V  P+ V  L  + V+  + G   + +++ +G+++    
Sbjct: 86  VWSFGQNTKGEL--GTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGS 143

Query: 176 GNDARLGHHT----EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
               +LG            +P  LL     I + Q+A G  + LAL+ +     VY  G 
Sbjct: 144 NLHDKLGLEGITTGSKKTFKPVELL---TQIFIKQVACGDYHTLALSKEGQ---VYVWGG 197

Query: 232 GLGGKLGHGS--RTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            L  K G  S  R D  +  P L++ F    ++ +    G +H+  +  +G + +WG G 
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQI--DCGDFHSLALDDNGTLYSWGVGE 255

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G  GHG  E +  P+ ++  +      +  G++ T  ++ D  VY++G G     G   
Sbjct: 256 KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGE 315

Query: 348 IADGQGNRHANVLTPQLVTSLKQ----------VNERVVQI-----SLTNSIYWNAHTFA 392
                     N   PQLV    Q          V + +++       +        HT  
Sbjct: 316 FE--------NTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLV 367

Query: 393 LTESGKLYAFGAGDKGQLGIELVNN 417
           LT SG++++FG   +GQLG   V+N
Sbjct: 368 LTSSGQIFSFGYNQQGQLGHNTVDN 392



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            Q  AG  H++ +TS G ++SFG N  GQLGH T +   RP+ +  +   + +Q AAG  
Sbjct: 356 KQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRN 415

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ +++   VYA G + +G+   G+   ++  +   V SL ++   +   G F + V+ 
Sbjct: 416 HSLCLTNKNDVYACGNNQYGQC--GLPDREMRKTFSHVLSLLSVNSFKLYAGGFHSWVVL 473

Query: 166 RE 167
            E
Sbjct: 474 DE 475



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 28/178 (15%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE----CESVPKVVQALNDVKAIHVATG 319
           VA G +H   + ++G+V  WG   +   G  ++E     +  P ++Q+    K   +  G
Sbjct: 176 VACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCG 235

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           D+ +  + ++G +YS+G GE    GH    D +  +       +++T ++  N       
Sbjct: 236 DFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNH------ 289

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI---------ELVNNQTERGNPERVD 428
                    HT A+T   ++YA+G G  GQ G          +LVN  ++  N   +D
Sbjct: 290 ---------HTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLD 338


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 11  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 70

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 71  YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 128

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 184

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G RTD   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 242

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 243 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 297

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 298 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 347

Query: 409 QLGI 412
           QLGI
Sbjct: 348 QLGI 351



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62

Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 63  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 237 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 281

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 282 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 311



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 230

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 231 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 286

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 287 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 343

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEALS 367



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+I+V+  G +Y++G +  GQLGHG  E+   P  + +L    I Q + G  
Sbjct: 216 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 275

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            TM ++  G++Y +G + FG+   GV       SP  V    +  VVQ + G   T  ++
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 333

Query: 166 REGRVYTFSWGNDARLG 182
               V+ +  G + +LG
Sbjct: 334 ERNNVFAWGRGTNGQLG 350



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 260 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 320 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 366


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 11  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 70

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 71  YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 128

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 184

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G RTD   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 242

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 243 GQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQV----- 297

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 298 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 347

Query: 409 QLGI 412
           QLGI
Sbjct: 348 QLGI 351



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 158/333 (47%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62

Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 63  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH  + D         L P  + +L   N  + QIS         HT ALT
Sbjct: 237 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGGFR-----HTMALT 281

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 282 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 311



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 230

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 231 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGFRHTMALT---SDGKL 286

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 287 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 343

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEALS 367



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+I+V+  G +Y++G +  GQLGHG  E+   P  + +L    I Q + G  
Sbjct: 216 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFR 275

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            TM ++  G++Y +G + FG+   GV       SP  V    +  VVQ + G   T  ++
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 333

Query: 166 REGRVYTFSWGNDARLG 182
               V+ +  G + +LG
Sbjct: 334 ERNNVFAWGRGTNGQLG 350



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 260 EALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 320 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 366


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4017

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4018 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4075

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I +V +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4076 KLGHGNRSPCDRPR-VIESLRGIELVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4131

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4132 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4191

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4192 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4243

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4244 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4288



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E+VP +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 166/339 (48%), Gaps = 18/339 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3986 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4045

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I +V  A
Sbjct: 4046 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIELVDVA 4103

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 4104 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4162

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4163 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4219

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4220 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4279

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            G  +   LG     DG  N    +  P+LV +L  K+VN
Sbjct: 4280 GDNDEGQLG-----DGTTN---AIQRPRLVPALQGKKVN 4310



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 4052 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSAC 4111

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++ AG +Y +GK  +G   +     +L   P+LVE+L+   VV  A   G+  T  L+ +
Sbjct: 4112 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4169

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4170 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4225

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4226 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4284 EGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLAWS 4323



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 167/330 (50%), Gaps = 26/330 (7%)

Query: 86   PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
            P    +L  + ++Q A G+     ++  G+VYA G+ + G    G+  +  V  P+ V +
Sbjct: 2987 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQVTA 3045

Query: 146  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
            L +  V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L+   
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKR 3104

Query: 204  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
            +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +  P++++   LL  + + 
Sbjct: 3105 IRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQ 3159

Query: 264  VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            VA G+  A  +    +G V +WG G +G LG G  E  ++P+ ++ LN      +  G  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 322  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
             +  +++ G V+++G G+   LGH +          +V  PQ+V  L+   +++V +++ 
Sbjct: 3220 FSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVG 3269

Query: 382  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   H  A+T++G++YA+G  D GQ G
Sbjct: 3270 A-----LHCLAVTDAGQVYAWGDNDHGQQG 3294



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR + +L    + + A 
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAV 3056

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3057 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3114 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3172

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3173 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3228

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3229 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3286



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 133/281 (47%), Gaps = 20/281 (7%)

Query: 133  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
            G   +  P   E+L  + VVQ A G+     ++ EG+VY      + RLG       V  
Sbjct: 2980 GLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI 3039

Query: 193  HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
               +  L +  V ++A       A A    G  V+S G G  GKLGH SR +   PRLIE
Sbjct: 3040 PRQVTALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098

Query: 253  QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              +   ++   +A G+ H+A +   G + TWG G YG LGHG+   +  PK+V+ L   +
Sbjct: 3099 ALKTKRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3156

Query: 313  AIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
             I VA G  D  T  ++++G V+S+G G+   LG        G+   N+  PQ +  L  
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNIERLN- 3207

Query: 371  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              + V QI           + ALT+SG ++ +G GD  +LG
Sbjct: 3208 -GQGVCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 3242



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3111 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3171 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3229 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3284

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3311



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + V  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAV--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3951 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4007

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4008 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4066

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4067 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRY 4126

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4127 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4173

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4174 SWGDGDYGKLG 4184



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3260

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3261 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318

Query: 155  AIGN 158
            A G+
Sbjct: 3319 ACGS 3322



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 264  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            +  G W    VGQ G V T   G   C G G  + + VP   + L+ +  + VA G  + 
Sbjct: 2954 IQRGPWTPFGVGQ-GAVST---GSLCCDGVGLSQIK-VPSFSETLSALNVVQVAGGSKSL 3008

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
            F V+ +G VY+ G   +  L       G G     V  P+ VT+L     + V +     
Sbjct: 3009 FAVTVEGKVYACGEATNGRL-------GLGISSGTVPIPRQVTALSSYVVKKVAVH---- 3057

Query: 384  IYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 H  ALT  GK++++G GD G+LG
Sbjct: 3058 -SGGRHATALTVDGKVFSWGEGDDGKLG 3084


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 23  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 82

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 83  YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 140

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 196

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G RTD   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 254

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 309

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 310 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 359

Query: 409 QLGI 412
           QLGI
Sbjct: 360 QLGI 363



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 17  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 74

Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 75  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 133

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 134 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 188

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 248

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 249 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 293

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 294 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 323



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 184

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 185 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 242

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 243 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 298

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 299 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 355

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 356 GTNGQLGIGESVDRNFPKIIEALS 379



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 272 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 331

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 332 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 378


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 174/356 (48%), Gaps = 34/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    PR I       + Q A G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           + + +  + +   +    PQL+  L++  ++Q + G+  +  LS  G+V   SWG++   
Sbjct: 67  NDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH TE   V+   ++  L +  VVQIA G  + LAL    S   +YS G  + G+LG 
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177

Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
            S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH           
Sbjct: 236 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           +N + P++V  L  +   + Q++  N      HT AL  S GK+YAFG G  GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGKVYAFGLGSSGQLG 336



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 21/306 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP+ I  LQ   IIQ + G+  
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +SD GQV ++G +  G+  +  +  ++V  P++V  L +  VVQ A GN  +  L+ 
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
            G +Y  SWG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G 
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLG 330

Query: 339 ESASLG 344
            S  LG
Sbjct: 331 SSGQLG 336



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 94  QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV     +T    P  + +L  I +   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  +  
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   G+V 
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGKVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 20/208 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   PR I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   Y  LGH  +     P+++  L D   I ++ G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH             V  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATEKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             G+VY F  G+  +LG  +  + + P  ++G
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 48/371 (12%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            VY++G  + GQLG      ++ P+ +  L    II+  A    +M +S  G+VY +GK+
Sbjct: 44  TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKN 103

Query: 123 SFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
             G    Y +    ++  P+LVE L+NI + Q + G F  A +S++G +YT  WGN    
Sbjct: 104 KGGILGHYDITSFNMI-QPELVEKLENIQIKQISCGPFHMAAISQDGELYT--WGNKDHG 160

Query: 180 RLGHHTE--PNDVEPH-----------PLLGT----LENIPVVQIAAGYCYLLALACQPS 222
           +LGH  +   N VE              +L T    L  I   Q++ G  + + L     
Sbjct: 161 KLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT---E 217

Query: 223 GMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              VYS G  + G+LG+ S  T    P+ I   Q +    + +  G   +A V   G+V 
Sbjct: 218 NGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNI----INIDCGQQFSAAVSSSGKVY 273

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG   +G LG+     ++ P  V      K I+++ GD     +S +G ++++G G   
Sbjct: 274 TWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDG 333

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LGH+       NR+ ++  P+ +    +  E+++++    +     HT  LT++ +LY 
Sbjct: 334 QLGHS-------NRN-DLYAPKQI----EFKEKIIKVDCGGT-----HTAFLTQNNQLYL 376

Query: 402 FGAGDKGQLGI 412
           FG G++GQLGI
Sbjct: 377 FGRGNEGQLGI 387



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 41/332 (12%)

Query: 25  GSWKLVLRFLLAGEACCRREN---SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
           G + +    ++  E   + EN    Q   GP H  A++  G +Y++G+   G+LGH   +
Sbjct: 109 GHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQ 168

Query: 82  EEWR------------------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           +  +                  P  ++SL GI+  Q + G   T+++++ G+VY+FG   
Sbjct: 169 KSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSM 228

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARL 181
            G+  Y  + T     P+ +  L+NI  +    G  F+A +S  G+VYT  WGN+   +L
Sbjct: 229 KGQLGYQSEETGNF-QPKKIPDLQNIINIDC--GQQFSAAVSSSGKVYT--WGNNDHGQL 283

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G++       P+ + G   N  ++ I+ G  ++ AL+ +     +++ G G  G+LGH +
Sbjct: 284 GNNQSIYQARPNQVTGFGGN-KIINISCGDNFIAALSNEGK---LFTWGYGNDGQLGHSN 339

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECE- 299
           R D   P+ IE       + + V  G  H A + Q+ ++  +G G  G LG G N E E 
Sbjct: 340 RNDLYAPKQIE----FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEA 395

Query: 300 ---SVPKVVQALNDVKAIHVATGDYTTFVVSE 328
              + PK+V+    +K + V  G   T  ++E
Sbjct: 396 AIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 166/382 (43%), Gaps = 49/382 (12%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGI 95
           E    R   +  A    S+A++  G VY++G N  G LGH   T+    +P  +  L+ I
Sbjct: 71  EKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENI 130

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-------------------GTKL 136
           +I Q + G      IS  G++Y +G    G+  + +Q                   G+ L
Sbjct: 131 QIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSML 190

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
              P  V+SL  I   Q + G  FT VL+  G VY+F      +LG+ +E         +
Sbjct: 191 ---PTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKI 247

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-- 254
             L+NI  + I  G  +  A++   S   VY+ G    G+LG+     +  P  +  F  
Sbjct: 248 PDLQNI--INIDCGQQFSAAVS---SSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGG 302

Query: 255 -QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            +++N     ++ G    A +  +G++ TWG+G  G LGH N      PK ++     K 
Sbjct: 303 NKIIN-----ISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEF--KEKI 355

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           I V  G   T  ++++  +Y FG G    LG   I +   +  A   TP++V   K++  
Sbjct: 356 IKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG---IGENIESEAAIRTTPKIVEFFKKM-- 410

Query: 374 RVVQISLTNSIYWNAHTFALTE 395
           +VV ++         +T A+TE
Sbjct: 411 KVVDVTCGGE-----YTLAITE 427



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 27/235 (11%)

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           + +G+         P    VY+ G G  G+LG  +  ++  P+ +E+    N+  + V A
Sbjct: 26  VTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNI--IKVKA 83

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTF 324
               +  + QDG+V TWG  + G LGH +    ++  P++V+ L +++   ++ G +   
Sbjct: 84  NKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMA 143

Query: 325 VVSEDGDVYSFGCGESASLGH------NAIADGQGNRHANV----LTPQLVTSLKQVNER 374
            +S+DG++Y++G  +   LGH      N +   +GN++ +     + P  V SL  +  +
Sbjct: 144 AISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGI--K 201

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN--PERV 427
             Q+S          T  LTE+G++Y+FG   KGQLG +      E GN  P+++
Sbjct: 202 CKQVSCGGQF-----TVVLTENGEVYSFGNSMKGQLGYQ----SEETGNFQPKKI 247


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 23/357 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G+VYA G 
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3929

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G   + LV  P L+ES++++F+ + A+  G      LS +  VY++  G+D 
Sbjct: 3930 GAGGRLGIGGTDSVLV--PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDG 3987

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  L+  L+   ++ IA G  +  A+    S   +Y+ G G  G+LGH
Sbjct: 3988 KLGHGNRLACETPK-LIEALQGYEIIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGH 4043

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+LIE+     +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4044 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4103

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VPK +++L  +  I V  G   +  ++  G VY++G G+   LGH     G G    +V
Sbjct: 4104 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-----GTGE---HV 4155

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
              P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG +  N
Sbjct: 4156 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDEGEVFTWGDNDEGQLGDDTTN 4205



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 168/341 (49%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   S+ + S +G +Y+ G  ++G+LG G +     PRPI  L    I+ +   +G  
Sbjct: 2932 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2991

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              M ++  G+V+++G+   G+  +G +    +  P+++E+L++  +   A G+  +A ++
Sbjct: 2992 HAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAIT 3049

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+ +L    +VQ+A G      LA    G  
Sbjct: 3050 SSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDAQTLALTDEGW- 3107

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   L +  V +  GA  +  + + G V TWG 
Sbjct: 3108 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLALTKTGEVWTWGK 3165

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG+++    P V+++L D K IHVA G      V++ G VY++G  +    G+
Sbjct: 3166 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3225

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                    NR      P LV  L+ V+   V    ++SI W
Sbjct: 3226 GTTI---VNRK-----PALVHGLEDVHINRVACGSSHSIAW 3258



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 175/352 (49%), Gaps = 27/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N   QLG     +   P     L  +  I  A G+    ++S  G++YA G+ +
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2955

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+  +  V  P+ +  L    + + A+  G      L+ +G+V+++  G D +L
Sbjct: 2956 NGR--LGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    N  +P  ++  L +  +  IA G  +  A+    S   +Y+ G G  G+LGHG 
Sbjct: 3014 GHGNRLNLDKPK-MIEALRSKKIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGD 3069

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
               +  P+LI+   L+  + V VA G+  A  +    +G V +WG G +G LG G  E  
Sbjct: 3070 NITQLKPKLIK--SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGC 3127

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            ++P  ++ LN ++ + +  G   +  +++ G+V+++G G+   LGH +      ++H  V
Sbjct: 3128 NIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGS------DQH--V 3179

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P ++ SLK  +++V+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3180 RKPTVIESLK--DKKVIHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3224



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG T  +  P  I++L+G  II    G   +  IS  
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVY 171
           G +Y +G+ ++G   +G     L  +P ++ +L +  +++ A G+F+  T  ++ +G+VY
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCL--TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVY 643

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LG         P  L+  L+N+ +VQ+  G  + +AL+       VY+ G 
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALS---EDGHVYTWGK 699

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G KLGH +  + + P ++E  +  + + V V+ G  H   +   G V  WG      +
Sbjct: 700 GEGWKLGHPTEENVRFPEMVEVLR--DRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
              +E     P++++AL   K + V  G   +F  ++D +
Sbjct: 758 CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 35/328 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+   +L  + I Q        ++++  G+V+     S  +             PQ +  
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTG 509

Query: 146 LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           L  I +++ A    G  + A L+++  VY++  G+  RLGH       EP  L+  L+  
Sbjct: 510 LSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGK 567

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            ++ +  G  Y  A++   +  A+Y+ G G  G+LGHG+  D   P +I      ++  V
Sbjct: 568 DIIDVECGGTYSAAIS---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
              +   H   +   G+V +WG G YG LG G  +   +P++++ L +VK + V  G   
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +SEDG VY++G GE   LGH            NV  P++V  L+  + +VV +SL  
Sbjct: 685 SVALSEDGHVYTWGKGEGWKLGHPT--------EENVRFPEMVEVLR--DRKVVGVSLGV 734

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQL 410
           S     H  ALT+ G++Y +G  +  Q+
Sbjct: 735 S-----HVLALTDQGEVYGWGKNENKQI 757



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 158/333 (47%), Gaps = 8/333 (2%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q + G     AVT+ G VY+ G  + G+LG G T+    P  + S+Q + I
Sbjct: 3898 EALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFI 3957

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S    VY++G+   G+  +G        +P+L+E+L+   ++  A
Sbjct: 3958 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHG--NRLACETPKLIEALQGYEIIDIA 4015

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G++YT+  G   RLGH    + ++P  L+  L    V+ +A G     
Sbjct: 4016 CGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYKVIDVACGSGDAQ 4074

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P+ IE   L  L  + V  G+  +  + 
Sbjct: 4075 TL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALT 4131

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG  E    PK V AL   K I +ATG       S++G+V+++
Sbjct: 4132 RSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTW 4191

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            G  +   LG +     Q  R  + L  + +T++
Sbjct: 4192 GDNDEGQLGDDTTNAIQRPRLVSALQGKKITNV 4224



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
           G  +S A+++ G +Y++G  + G+LGHGT E+   P  I +L    II+ A G+    T+
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL 634

Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            I+  G+VY++G   +G+    G  G+KL   P+L+E L+N+ +VQ   G  F+  LS +
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGSDGSKL---PRLIEKLQNVKIVQVYCGAQFSVALSED 691

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VYT+  G   +LGH TE N   P  ++  L +  VV ++ G  ++LAL  Q     VY
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPE-MVEVLRDRKVVGVSLGVSHVLALTDQGE---VY 747

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G     ++   S    + PRLIE  +
Sbjct: 748 GWGKNENKQICDSSELFVQQPRLIEALK 775



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 137/278 (49%), Gaps = 39/278 (14%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           PQ  ++L  + + Q    +    +L++ G+V+   + +D +           P  + G L
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC----------PQEMTG-L 510

Query: 200 ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
             I +++IAA   G  YL AL        VYS G G GG+LGHG  + ++ P LI+  + 
Sbjct: 511 SGINMIKIAAHPEGKHYL-ALT---KDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKG 566

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
            ++  + V  G  ++A +  +G + TWG G YG LGHG  E    P ++ AL+D   I V
Sbjct: 567 KDI--IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624

Query: 317 ATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
           A G +   T  ++  G VYS+G G+   LG    +DG          P+L+  L+ V  +
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGG-SDGSK-------LPRLIEKLQNV--K 674

Query: 375 VVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 411
           +VQ+      Y  A  + AL+E G +Y +G G+  +LG
Sbjct: 675 IVQV------YCGAQFSVALSEDGHVYTWGKGEGWKLG 706



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 10/283 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A+++   VYS+G    G+LGHG       P+ I +LQG  II  A G   +  
Sbjct: 3964 SGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAA 4023

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  GQ+Y +GK  +G   +G    +L   P+L+E L    V+  A   G+  T  ++ +
Sbjct: 4024 ITSTGQLYTWGKGRYGRLGHGDSEDQL--KPKLIEELVGYKVIDVACGSGDAQTLCITDD 4081

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V+++  G  + +AL    SG +VY
Sbjct: 4082 DNVWSWGDGDYGKLGRGGSDGCKVPKK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 4137

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P+ +   Q    + + +A G+ H      +G V TWG   
Sbjct: 4138 TWGKGDYHRLGHGTGEHVRRPKKVAALQ--GKKIISIATGSLHCVACSDEGEVFTWGDND 4195

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             G LG         P++V AL   K  +VA G   T   S + 
Sbjct: 4196 EGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTNN 4238



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA   ++      G  HS A+TS G +Y++G    G+LGHG    + +P+ I+SL G RI
Sbjct: 3028 EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRI 3087

Query: 98   IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +Q A G+   +T+ ++D G V+++G   FG+   G  G++    P  +E L  + VVQ  
Sbjct: 3088 VQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG--GSEGCNIPHNIERLNALEVVQIE 3145

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G  F+  L++ G V+T+  G+  RLGH ++ +  +P  ++ +L++  V+ +A G  + L
Sbjct: 3146 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCL 3204

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVV 274
            A+        VY+ G    G+ G+G+    + P L+   + +++    VA G+ H+ A  
Sbjct: 3205 AVT---DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR--VACGSSHSIAWT 3259

Query: 275  GQDGRVCT 282
             QD +V +
Sbjct: 3260 LQDTQVVS 3267



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 164  LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
            L+R    +T SWG    +      H  +   +E      P P    L  +  VQ+  G  
Sbjct: 3855 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3913

Query: 213  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
             L A+    +   VY+ G G GG+LG G       P L+E  Q + ++ + V +G  H  
Sbjct: 3914 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3970

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
             +  D  V +WG G  G LGHGN      PK+++AL   + I +A G   +  ++  G +
Sbjct: 3971 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 4030

Query: 333  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            Y++G G    LGH    D         L P+L+  L  V  +V+ ++  +    +A T  
Sbjct: 4031 YTWGKGRYGRLGHGDSEDQ--------LKPKLIEEL--VGYKVIDVACGSG---DAQTLC 4077

Query: 393  LTESGKLYAFGAGDKGQLG 411
            +T+   ++++G GD G+LG
Sbjct: 4078 ITDDDNVWSWGDGDYGKLG 4096



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   S+A++  G VY++G     +LGH T E    P  +  L+  +++  + G   
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + ++D G+VY +GK+   E +     ++L V  P+L+E+LK   VV             
Sbjct: 737 VLALTDQGEVYGWGKN---ENKQICDSSELFVQQPRLIEALKGQKVVGVCC--------- 784

Query: 166 REGRVYTFSWGND 178
             G   +F+W +D
Sbjct: 785 --GPAQSFAWTDD 795



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 13/133 (9%)

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            RV  WG      LG        +P     L+ +  IH+A G  + F+VS +G +Y+ G G
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2954

Query: 339  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
             +  LG      G  N   NV  P+ +  L Q   + V +          H  ALT  GK
Sbjct: 2955 TNGRLGL-----GHSN---NVPYPRPIPFLSQYVIKKVAVH-----SGGKHAMALTLDGK 3001

Query: 399  LYAFGAGDKGQLG 411
            ++++G G+ G+LG
Sbjct: 3002 VFSWGEGEDGKLG 3014


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 23/357 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G+VYA G 
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3090

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G   + LV  P L+ES++++F+ + A+  G      LS +  VY++  G+D 
Sbjct: 3091 GAGGRLGIGGTDSVLV--PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDG 3148

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  L+  L+   ++ IA G  +  A+    S   +Y+ G G  G+LGH
Sbjct: 3149 KLGHGNRLACETPK-LIEALQGYEIIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGH 3204

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+LIE+     +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3205 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 3264

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VPK +++L  +  I V  G   +  ++  G VY++G G+   LGH     G G    +V
Sbjct: 3265 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-----GTGE---HV 3316

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
              P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG +  N
Sbjct: 3317 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDEGEVFTWGDNDEGQLGDDTTN 3366



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 168/341 (49%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   S+ + S +G +Y+ G  ++G+LG G +     PRPI  L    I+ +   +G  
Sbjct: 2093 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2152

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              M ++  G+V+++G+   G+  +G +    +  P+++E+L++  +   A G+  +A ++
Sbjct: 2153 HAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAIT 2210

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+ +L    +VQ+A G      LA    G  
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDAQTLALTDEGW- 2268

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   L +  V +  GA  +  + + G V TWG 
Sbjct: 2269 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLALTKTGEVWTWGK 2326

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG+++    P V+++L D K IHVA G      V++ G VY++G  +    G+
Sbjct: 2327 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2386

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                    NR      P LV  L+ V+   V    ++SI W
Sbjct: 2387 GTTI---VNRK-----PALVHGLEDVHINRVACGSSHSIAW 2419



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 182/381 (47%), Gaps = 37/381 (9%)

Query: 45   NSQAIAGPGHSIAVTSKGV----------VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            N + I GP  S  V               V+ +G N   QLG     +   P     L  
Sbjct: 2028 NQEQIPGPSTSANVAQDSTGEPSSTVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQ 2087

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            +  I  A G+    ++S  G++YA G+ + G    G+  +  V  P+ +  L    + + 
Sbjct: 2088 LWPIHIAGGSKSLFIVSHEGKLYACGEGTNGR--LGLGHSNNVPYPRPIPFLSQYVIKKV 2145

Query: 155  AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
            A+  G      L+ +G+V+++  G D +LGH    N  +P  ++  L +  +  IA G  
Sbjct: 2146 AVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPK-MIEALRSKKIRDIACGSS 2204

Query: 213  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            +  A+    S   +Y+ G G  G+LGHG    +  P+LI+   L+  + V VA G+  A 
Sbjct: 2205 HSAAIT---SSGELYTWGLGEYGRLGHGDNITQLKPKLIK--SLVGHRIVQVACGSRDAQ 2259

Query: 273  VVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             +    +G V +WG G +G LG G  E  ++P  ++ LN ++ + +  G   +  +++ G
Sbjct: 2260 TLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTG 2319

Query: 331  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            +V+++G G+   LGH +      ++H  V  P ++ SLK  +++V+ +++        H 
Sbjct: 2320 EVWTWGKGDYFRLGHGS------DQH--VRKPTVIESLK--DKKVIHVAVG-----ALHC 2364

Query: 391  FALTESGKLYAFGAGDKGQLG 411
             A+T++G++YA+G  D GQ G
Sbjct: 2365 LAVTDTGQVYAWGDNDHGQQG 2385



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 8/333 (2%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q + G     AVT+ G VY+ G  + G+LG G T+    P  + S+Q + I
Sbjct: 3059 EALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFI 3118

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S    VY++G+   G+  +G +      +P+L+E+L+   ++  A
Sbjct: 3119 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLIEALQGYEIIDIA 3176

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G++YT+  G   RLGH    + ++P  L+  L    V+ +A G     
Sbjct: 3177 CGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYKVIDVACGSGDAQ 3235

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P+ IE   L  L  + V  G+  +  + 
Sbjct: 3236 TL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALT 3292

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG  E    PK V AL   K I +ATG       S++G+V+++
Sbjct: 3293 RSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTW 3352

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            G  +   LG +     Q  R  + L  + +T++
Sbjct: 3353 GDNDEGQLGDDTTNAIQRPRLVSALQGKKITNV 3385



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA   ++      G  HS A+TS G +Y++G    G+LGHG    + +P+ I+SL G RI
Sbjct: 2189 EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRI 2248

Query: 98   IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +Q A G+   +T+ ++D G V+++G   FG+   G  G++    P  +E L  + VVQ  
Sbjct: 2249 VQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG--GSEGCNIPHNIERLNALEVVQIE 2306

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G  F+  L++ G V+T+  G+  RLGH ++ +  +P  ++ +L++  V+ +A G  + L
Sbjct: 2307 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCL 2365

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVV 274
            A+        VY+ G    G+ G+G+    + P L+   + +++    VA G+ H+ A  
Sbjct: 2366 AVT---DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR--VACGSSHSIAWT 2420

Query: 275  GQDGRVCT 282
             QD +V +
Sbjct: 2421 LQDTQVVS 2428



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 10/283 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A+++   VYS+G    G+LGHG       P+ I +LQG  II  A G   +  
Sbjct: 3125 SGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAA 3184

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  GQ+Y +GK  +G   +G    +L   P+L+E L    V+  A   G+  T  ++ +
Sbjct: 3185 ITSTGQLYTWGKGRYGRLGHGDSEDQL--KPKLIEELVGYKVIDVACGSGDAQTLCITDD 3242

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V+++  G  + +AL    SG +VY
Sbjct: 3243 DNVWSWGDGDYGKLGRGGSDGCKVPKK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 3298

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P+ +   Q    + + +A G+ H      +G V TWG   
Sbjct: 3299 TWGKGDYHRLGHGTGEHVRRPKKVAALQ--GKKIISIATGSLHCVACSDEGEVFTWGDND 3356

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             G LG         P++V AL   K  +VA G   T   S + 
Sbjct: 3357 EGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTNN 3399



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 164  LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
            L+R    +T SWG    +      H  +   +E      P P    L  +  VQ+  G  
Sbjct: 3016 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3074

Query: 213  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
             L A+    +   VY+ G G GG+LG G       P L+E  Q + ++ + V +G  H  
Sbjct: 3075 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3131

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
             +  D  V +WG G  G LGHGN      PK+++AL   + I +A G   +  ++  G +
Sbjct: 3132 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 3191

Query: 333  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            Y++G G    LGH    D         L P+L+  L  V  +V+ ++  +    +A T  
Sbjct: 3192 YTWGKGRYGRLGHGDSEDQ--------LKPKLIEEL--VGYKVIDVACGSG---DAQTLC 3238

Query: 393  LTESGKLYAFGAGDKGQLG 411
            +T+   ++++G GD G+LG
Sbjct: 3239 ITDDDNVWSWGDGDYGKLG 3257


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 173/382 (45%), Gaps = 31/382 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+    V+ S+G    GQLGHG  E+   P  I      RI     GA  T  
Sbjct: 28  AGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTA 87

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +  QVY++G   FG   +G   +  V +PQ V +L+ I + Q A G+     ++  G
Sbjct: 88  YSEEEQQVYSWGWGDFGRLGHG--NSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGG 145

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    E I V  IAAG  +  A+        +Y 
Sbjct: 146 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFEGICVKMIAAGAEHTAAVTEDGD---LYG 201

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 287
            G G  G LG G R D   P   E+  L+  + +V+ A  W H   V   G + T+GW +
Sbjct: 202 WGWGRYGNLGLGDRNDRFVP---EKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LGHG+ E    P  V+AL D     ++ G   T  ++ DG +Y +G  +   +G   
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             D     H +      V  +    ++V Q++      W  HT A TE   ++A+G G  
Sbjct: 319 SVD-----HCSP-----VQVMFPAEQKVAQVACG----WR-HTLAYTEKKNVFAWGRGTS 363

Query: 408 GQLGI-ELVNNQTERGNPERVD 428
           GQLG  E+V    +R  P  +D
Sbjct: 364 GQLGHGEIV----DRNKPLMID 381



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 14/366 (3%)

Query: 46  SQAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+ A + +   VYS+G    G+LGHG + + + P+P+R+LQGI+I Q A G 
Sbjct: 76  TSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGD 135

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++  G+V ++G++  G+   G     L+  PQ +++ + I V   A G   TA +
Sbjct: 136 SHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFEGICVKMIAAGAEHTAAV 193

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     +   P   +  +E   +V IA G+ + + ++   SG+
Sbjct: 194 TEDGDLYGWGWGRYGNLGLGDRNDRFVPEK-VSLVEGEKMVLIACGWRHTITVSS--SGI 250

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
            +Y+ G    G+LGHG   D   P  +E  +  +   +   +G W H   +  DG++  W
Sbjct: 251 -LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 306

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GW ++G +G G+      P  V    + K   VA G   T   +E  +V+++G G S  L
Sbjct: 307 GWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQL 366

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN-AHTFALTESGKLYAF 402
           GH  I D       + ++P    S K   E    +  T  ++ + +  +AL    K+   
Sbjct: 367 GHGEIVDRNKPLMIDAISPDGSGSKKL--ESSTAVPFTAKVWVSPSERYALVPDEKVAKP 424

Query: 403 GAGDKG 408
           G G  G
Sbjct: 425 GVGTAG 430



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 24/316 (7%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ + +   + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV--PTVISGFDAPRITSVIC 80

Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + Q+A G  + L
Sbjct: 81  GADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVR-ALQGIKIKQMACGDSHCL 139

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A+     G  V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V 
Sbjct: 140 AVTM---GGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVK--MIAAGAEHTAAVT 194

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG +  WGWGRYG LG G+     VP+ V  +   K + +A G   T  VS  G +Y++
Sbjct: 195 EDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P  V +LK  +    QIS      W  HT ALT 
Sbjct: 255 GWSKYGQLGHGDFEDH--------LFPHKVEALK--DSSTSQISGG----WR-HTMALTS 299

Query: 396 SGKLYAFGAGDKGQLG 411
            GKLY +G    GQ+G
Sbjct: 300 DGKLYGWGWNKFGQVG 315



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 22/226 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           VV ++AG  + +AL     G  + S G G  G+LGHG   D   P +I  F    +  V+
Sbjct: 23  VVLVSAGASHSVALL---EGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVI 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
             A     A   ++ +V +WGWG +G LGHGN      P+ V+AL  +K   +A GD   
Sbjct: 80  CGADH-TTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHC 138

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             V+  G+V S+G  ++  LG     D         L PQ + + + +  +++       
Sbjct: 139 LAVTMGGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFEGICVKMIAAGAE-- 188

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
                HT A+TE G LY +G G  G LG+    ++ +R  PE+V +
Sbjct: 189 -----HTAAVTEDGDLYGWGWGRYGNLGL---GDRNDRFVPEKVSL 226


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        LR ++A    CR    R   +   G  HS+ +   G VY+ G NS
Sbjct: 3   CWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNS 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G  + G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGHG+   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 153/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G +S G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH ++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT A    SG +YAFG G +GQLG
Sbjct: 302 GRQ-----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT    +  +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG   +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---NPRRV 288



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 130/259 (50%), Gaps = 14/259 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N  +LG   E +   P H  L  L    VV I+ G  +   L    SG  V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
            G G  G+LGHGS  DE +PR +   +L+  +   +A G  H  A V   G +  +G G 
Sbjct: 266 FGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 288 YGCLGHG---NEECESVPK 303
            G LG G   N +C S  K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +G    ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 82  YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G RTD   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358

Query: 409 QLGI 412
           QLGI
Sbjct: 359 QLGI 362



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73

Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 74  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 187

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 248 YGWSKYGQLGHGDLEDH--------LIPHKLEALS--NSFISQISGG----WR-HTMALT 292

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4270

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4271 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4328

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I V  +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4329 KLGHGNRSPCDRPR-VIESLRGIEVADVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4384

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4385 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4444

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4445 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4496

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4497 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4541



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L ++ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 700 VIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 748

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 749 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVIST 804

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 805 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 864

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 865 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 916

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 917 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 951



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 3215 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3274

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ V +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 3275 YACGEATNGRLGLGL-SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3333

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 3334 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 3389

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 3390 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3447

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +     
Sbjct: 3448 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 3502

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3503 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3551



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 174/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 4239 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4298

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I V   A
Sbjct: 4299 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVADVA 4356

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 4357 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4415

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4416 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4472

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4473 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4532

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 4533 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4582

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4583 AGKLPA 4588



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92   LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
            L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 709  LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 754

Query: 148  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
            NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 755  NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHV 814

Query: 205  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
            V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 815  VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 871

Query: 265  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
             +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 872  GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 931

Query: 325  VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
             +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 932  ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 980

Query: 385  YWNAHTFALTESGKLYAFGAGDKGQ 409
                H  ALTE  +++++G+ D+ Q
Sbjct: 981  ----HCLALTEDSEVHSWGSNDQCQ 1001



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 820 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 879

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 880 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 937

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 938 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 985



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR + +L    + + A 
Sbjct: 3254 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAV 3313

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3314 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3370

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3371 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3429

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3430 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3485

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3486 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3543



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 8/203 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3427

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3428 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3485

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3486 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3541

Query: 229  VGCGLGGKLGHGSRTDEKHPRLI 251
             G    G+ G+G+ T  + P L+
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLV 3564



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
            H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 767  HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAA 826

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 827  ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 884

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 885  GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 940

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 941  SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 995

Query: 288  YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                   N++C+           P  +  L+    + +A G   +F  S
Sbjct: 996  ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 1038



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 4204 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4260

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4261 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4319

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  ++   VA G   +  V+  GD+Y++G G  
Sbjct: 4320 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRY 4379

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4380 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4426

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4427 SWGDGDYGKLG 4437



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 873  SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 933  LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 990

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
            V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 991  VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 1030



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3463 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3517

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV  L+   + + 
Sbjct: 3518 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVHGLEGQKITRV 3575

Query: 155  AIGN 158
            A G+
Sbjct: 3576 ACGS 3579


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 178/363 (49%), Gaps = 37/363 (10%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           E CC         G  HS  +T  G +  +G    GQLG G  ++   PR + S++   +
Sbjct: 46  EVCC---------GGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSIK--NV 94

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQ 153
           I  +     +  I + G++Y +G +  G+   G         ++ +PQLVE L N  V++
Sbjct: 95  INVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIK 154

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            + G+F TA L+   + YT+  G   RLGH  + NDV    L+ +L  + V  I  G  +
Sbjct: 155 VSCGSFHTACLTDLNKAYTWGLGMQGRLGH-GDTNDVYTPKLIESLAGLSVKNIVCGGHH 213

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
              L    +   VY  G G  GKLG GS+ D   P+L+ Q  L N     V+ G  H+AV
Sbjct: 214 TAILL---NNGKVYFCGGGAFGKLGFGSKEDIYIPKLL-QGSLTNKSIKEVSLGYQHSAV 269

Query: 274 VGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
           +   G+V TWG G R G + +G E     PK+V+ LN + A++++ G   T V+S  GDV
Sbjct: 270 ITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDV 329

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           Y++G   + +LGH  I D + N       P L   L+  N+ +VQ+S   +     HT A
Sbjct: 330 YAWGV--TRNLGHGVI-DSKPN------DPTLHPILQ--NKNIVQVSCGKT-----HTIA 373

Query: 393 LTE 395
           L++
Sbjct: 374 LSD 376



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 32/352 (9%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAGQVYAF 119
           K  V ++GS+  GQLG    E    P+ I SL    RI +   G   + +I+ +G++  +
Sbjct: 7   KSGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVW 66

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           G    G  + G+   K +  P+++ S+KN  V+  +  +  +A +  +GR+YT+      
Sbjct: 67  GYGGCG--QLGLGDLKDIVIPRVMTSIKN--VINVSCSDRHSAAILEDGRLYTWGCNKSG 122

Query: 180 RLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
           +LG      +        P  L+  L N  V++++ G  +    AC       Y+ G G+
Sbjct: 123 KLGIGSLNVNLNNNIICTPQ-LVEKLLNEKVIKVSCGSFH---TACLTDLNKAYTWGLGM 178

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LGHG   D   P+LIE    L+++ +V   G  H A++  +G+V   G G +G LG 
Sbjct: 179 QGRLGHGDTNDVYTPKLIESLAGLSVKNIV--CGGHHTAILLNNGKVYFCGGGAFGKLGF 236

Query: 294 GNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G++E   +PK++Q +L +     V+ G   + V++  G VY++G G    LGH  I +G 
Sbjct: 237 GSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGH--IYNGP 292

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                ++L+P+LV  L  +    V IS  +S     HT  ++  G +YA+G 
Sbjct: 293 ---EPDILSPKLVEKLNSI--IAVNISCGHS-----HTVVISNIGDVYAWGV 334



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 48/306 (15%)

Query: 123 SFGEAEYGVQGTKLVTS---PQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           ++G +EYG  G     S   P+L+ESL +   + +   G   +AV++  G +  + +G  
Sbjct: 12  AWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGC 71

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGC 231
            +LG             LG L++I + ++      ++ ++C     A       +Y+ GC
Sbjct: 72  GQLG-------------LGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWGC 118

Query: 232 GLGGKLGHGSRTDEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
              GKLG GS     +      P+L+E+  LLN + + V+ G++H A +    +  TWG 
Sbjct: 119 NKSGKLGIGSLNVNLNNNIICTPQLVEK--LLNEKVIKVSCGSFHTACLTDLNKAYTWGL 176

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G  G LGHG+      PK++++L  +   ++  G + T ++  +G VY  G G    LG 
Sbjct: 177 GMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF 236

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            +  D        +  P+L+      N+ + ++SL        H+  +T  GK+Y +G G
Sbjct: 237 GSKED--------IYIPKLLQG-SLTNKSIKEVSLGYQ-----HSAVITTKGKVYTWGQG 282

Query: 406 DKGQLG 411
             G+LG
Sbjct: 283 --GRLG 286



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 18/134 (13%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 338
           V  WG   YG LG   EE    PK++++L     I  V  G + + V++  G++  +G G
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               LG   + D        ++ P+++TS+K V    + +S ++      H+ A+ E G+
Sbjct: 70  GCGQLGLGDLKD--------IVIPRVMTSIKNV----INVSCSDR-----HSAAILEDGR 112

Query: 399 LYAFGAGDKGQLGI 412
           LY +G    G+LGI
Sbjct: 113 LYTWGCNKSGKLGI 126


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 171/353 (48%), Gaps = 25/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            VVY +G N  GQL    + +  +P    SL  ++  Q   G      ++  G+VYA G  
Sbjct: 3545 VVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYT 3604

Query: 123  SFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
              G    G    K   V +PQLV+ L NI  V    G      LS  G VY +  G+D +
Sbjct: 3605 ESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGK 3664

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LG        +P  L+ +L +  ++ IA G  +  A++       +Y+ G G  G+LGHG
Sbjct: 3665 LGLGNRVTHSKPQ-LVQSLSDKCIIDIACGGFHSAAIS---RYGHLYTWGKGRYGRLGHG 3720

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D  +P+L++   L+N   V VA G+  A    V  D  V +WG G YG LGH   E 
Sbjct: 3721 DYEDYLYPKLVQG--LINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISES 3778

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L+    I +  G   +  +S +G +Y++G G+   LGH +          +
Sbjct: 3779 CKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGS--------SEH 3830

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V+ L+   +++VQ S T S+    H  ALT+ G++YA+G  D+GQLG
Sbjct: 3831 VRKPKPVSGLQ--GKKIVQFS-TGSL----HVLALTDDGEVYAWGDNDEGQLG 3876



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 173/362 (47%), Gaps = 25/362 (6%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIR 90
            LA ++    + +Q I G     AVTS G VY+ G   SG+LG G    +      P+ ++
Sbjct: 3569 LACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQ 3628

Query: 91   SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
             L  I  +   +G    + +S  G+VYA+G    G+   G + T   + PQLV+SL +  
Sbjct: 3629 GLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTH--SKPQLVQSLSDKC 3686

Query: 151  VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
            ++  A G F +A +SR G +YT+  G   RLGH    + + P  + G L N  VV++A G
Sbjct: 3687 IIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQG-LINYHVVKVACG 3745

Query: 211  YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
                  + C  S   V+S G G  GKLGH      K P  IE      +  + +  G+  
Sbjct: 3746 SGDAQTM-CVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGI--IQIDCGSQF 3802

Query: 271  AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
            +  +  +G + TWG G Y  LGHG+ E    PK V  L   K +  +TG      +++DG
Sbjct: 3803 SVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDG 3862

Query: 331  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            +VY++G  +   L       G G  H  +  P+ + +LK   +R+ Q+S       +AH+
Sbjct: 3863 EVYAWGDNDEGQL-------GDGTAHP-IARPRPIAALK--GKRIQQVSCG-----SAHS 3907

Query: 391  FA 392
            FA
Sbjct: 3908 FA 3909



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 161/358 (44%), Gaps = 23/358 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
            I V S+  VY +G N  GQLG     +  RP    +L  ++ I+   G+    ++S+ G+
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGK 2646

Query: 116  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTF 173
            V+  G  S G    G+     V+SP+ +  L    +   A+  G      LS +G+V ++
Sbjct: 2647 VFVCGDSSGGR--LGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSW 2704

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G D +LGH  +   ++   L+ +L    V  IA G  +  A+    S   +Y+ G G 
Sbjct: 2705 GDGEDGKLGH-GDILTLDTPKLIDSLLAKRVFYIACGSAHSAAIT---SDGELYTWGQGQ 2760

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             G+LGH     +  P+L+++F   N+  V   +       +  +G V +WG G +G LG 
Sbjct: 2761 YGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR 2820

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G  +    P+ V+ L   + + +  G   +  ++  G V+++G GE   LG      G+G
Sbjct: 2821 GGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGL-----GRG 2875

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +V  P LV  LK V    + +          H  A++  G +Y +G  D GQ G
Sbjct: 2876 ---EHVRRPTLVNQLKLVTIDHIAVG-------TLHCIAVSTQGDVYCWGDNDHGQQG 2923



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 166/386 (43%), Gaps = 17/386 (4%)

Query: 37   GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-- 94
             EA    +  + + G      V+++G V+  G +S G+LG     +   PR I  L    
Sbjct: 2620 NEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFV 2679

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            I+ +   +G    M +S  G+V ++G    G+  +G   T  + +P+L++SL    V   
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILT--LDTPKLIDSLLAKRVFYI 2737

Query: 155  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            A G+  +A ++ +G +YT+  G   RLGH  E +   P  L+       + Q+A G    
Sbjct: 2738 ACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPK-LVKEFVGKNITQVACGSRDA 2796

Query: 215  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
              LA    G  VYS G G  GKLG G       P+ +E+  L+  + V +  GA  +  +
Sbjct: 2797 QTLALDSEG-NVYSWGDGDFGKLGRGGSDGCCTPQKVER--LVGHRVVQIECGAQFSVAL 2853

Query: 275  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
               G+V TWG G Y  LG G  E    P +V  L  V   H+A G      VS  GDVY 
Sbjct: 2854 TATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYC 2913

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            +G  +           G G  +AN   P+LVT+   +    V    + SI W      L 
Sbjct: 2914 WGDNDHGQ-------QGNGTTNANQ-EPRLVTNFNNIKINRVGCGSSQSIAWKCPVLPLL 2965

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             S +   F    K  +G   +N   E
Sbjct: 2966 MSHEHVQF-TRIKDSMGATALNENVE 2990



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 20/232 (8%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           +AVT KG VYS+G N  G LGHG     +  P PI +   + ++  + G      +++ G
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVYT 172
           ++Y +GK         +  +    +P+LV+S+    V + + G+    T  LSREG V++
Sbjct: 565 KLYMWGK--------ILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFS 616

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F + N  R G   +  +V P  ++   E      I + YC+    A       V++ G G
Sbjct: 617 FEYRNSDR-GCDDKSLNVIPSMIVFDYE------IVSIYCHNDVNAVIDCANNVFTWGRG 669

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
               LGH +      P+ ++   L   Q   ++    +   +   G+V  WG
Sbjct: 670 NNNMLGHNNSFRVNRPKEVK--FLSGKQVTSLSLADDYILALTDTGQVYCWG 719



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+++ G +Y++G     +LGHG++E   +P+P+  LQG +I+Q + G+  
Sbjct: 3795 QIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLH 3854

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             + ++D G+VYA+G +   E + G      +  P+ + +LK   + Q + G+        
Sbjct: 3855 VLALTDDGEVYAWGDND--EGQLGDGTAHPIARPRPIAALKGKRIQQVSCGS-------- 3904

Query: 167  EGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
                ++F+W ++     HT+ +     PL
Sbjct: 3905 ---AHSFAWASEE--ACHTDNSTPTTIPL 3928



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 254  FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
             Q LN +P       W+    G    V  WG    G L   +      P    +L+ +K 
Sbjct: 3525 LQWLNSKP-----DDWNMTWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKP 3579

Query: 314  IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
              V  G+ T F V+  G VY+ G  ES  LG          ++  V+TPQLV  L     
Sbjct: 3580 TQVIGGEQTMFAVTSYGKVYASGYTESGRLG----IGPYNPKNPYVVTPQLVQGLNN--- 3632

Query: 374  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             ++++++ +      H  AL+ +G++YA+G GD G+LG+    N+     P+ V
Sbjct: 3633 -IIKVAVNSG---GRHCLALSTTGEVYAWGDGDDGKLGL---GNRVTHSKPQLV 3679



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 16/230 (6%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + ++  G+VY++G + FG   +G + +   T P+ + +   + VV  + G  F A ++ +
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPT-PEPIVAFSKLIVVMVSCGKDFCAAVTED 563

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G++Y   WG   ++ H +  N      L+ ++    V +++ G      LA    G  V+
Sbjct: 564 GKLYM--WG---KILHSS--NCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGY-VF 615

Query: 228 SVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           S       +  +  R  D+K   +I    + + + V +       AV+     V TWG G
Sbjct: 616 SF------EYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRG 669

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
               LGH N    + PK V+ L+  +   ++  D     +++ G VY +G
Sbjct: 670 NNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
           + + +V    V   D T   V++ G+VYS+G  E  +LGH       G ++++  TP+ +
Sbjct: 487 KQMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGH-------GQKYSSFPTPEPI 539

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
            +  ++   VV +S            A+TE GKLY +G
Sbjct: 540 VAFSKL--IVVMVSCGKDF-----CAAVTEDGKLYMWG 570


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 13/305 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS+ +   G VY+ GSNS GQLGH   +    P  + +L   +I   + G G +M +
Sbjct: 41  GGQHSVFLMHDGSVYTCGSNSCGQLGHD--KAGISPEVVGALDTQKITMVSCGRGHSMAV 98

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           ++ GQ++A+G    G+   G   T  V  P+LV+ L +  + Q   GN     LSR+G++
Sbjct: 99  NEQGQLFAWGAGDGGQLGLGTTETT-VRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQL 157

Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +T+      +LG    EP+ + PHP L +L  IP+ QI AG  +  AL+   SG AV+  
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHP-LKSLAGIPLAQITAGGDHSFALSL--SG-AVFGW 213

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG   + D   P  I   + L  Q VV ++ G  H A + +DG + T+G G +
Sbjct: 214 GKNRAGQLGLNDKQDRAVPCHI---KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSW 270

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGESASLGHNA 347
           G LGHG+   E +P+ V  L   +   +A G + T   V   G VY+FGC     LG   
Sbjct: 271 GQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGI 330

Query: 348 IADGQ 352
           + D +
Sbjct: 331 LGDAR 335



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 12/226 (5%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 99
           C    SQ + G  H +A++  G ++++G N+SGQLG G  E  +  P P++SL GI + Q
Sbjct: 134 CDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQ 193

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             AG   +  +S +G V+ +GK+  G+   G+   +    P  ++ L++  VV  + G+ 
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNRAGQL--GLNDKQDRAVPCHIKFLRSQKVVYISCGDE 251

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            TA L+++G ++TF  G+  +LGH +  +++ P  +L  L    V QIA G  + LA   
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-ELMGTEVSQIACGRHHTLAFV- 309

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI------EQFQLLNL 259
            PS   VY+ GC   G+LG G   D + P  +      E F+++N+
Sbjct: 310 -PSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINI 354



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 31/350 (8%)

Query: 67  FGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           +G+   GQLG G  +   + PR      G  + +   G   ++ +   G VY  G +S G
Sbjct: 4   WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +  +   G     SP++V +L    +   + G   +  ++ +G+++ +  G+  +LG  T
Sbjct: 64  QLGHDKAGI----SPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGT 119

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
               V    L+  L +  + Q+  G  + +AL+       +++ G    G+LG G     
Sbjct: 120 TETTVRIPRLVKRLCDHRISQVMCGNQHCVALS---RDGQLFTWGQNTSGQLGLGKGEPS 176

Query: 246 K---HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
           K   HP       L  +    + AG  H+  +   G V  WG  R G LG  +++  +VP
Sbjct: 177 KLFPHPLK----SLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP 232

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
             ++ L   K ++++ GD  T  +++DG +++FG G    LGH     G  N     L P
Sbjct: 233 CHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGH-----GSTNSE---LLP 284

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
           + V  L+ +   V QI+         HT A    SG +YAFG    GQLG
Sbjct: 285 RRV--LELMGTEVSQIACGRH-----HTLAFVPSSGVVYAFGCNSHGQLG 327


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 2319

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 2320 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2377

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH +      P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 2378 KLGHGSRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 2433

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 2434 SDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 2493

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 2494 KVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGS--------DDHV 2545

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++ + I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 2546 RRPRQVQGLQ--GKKAIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 2590



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 2288 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2347

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 2348 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGIEVVDVA 2405

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV IA G     
Sbjct: 2406 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVGIACGSGDAQ 2464

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 2465 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVRVECGSQFSVALT 2521

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   KAI +ATG       +EDG+VY++
Sbjct: 2522 KAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTW 2581

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 2582 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 2631

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 2632 AGKLPA 2637



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 166/325 (51%), Gaps = 26/325 (8%)

Query: 91   SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
            +L  + ++Q A G+     ++  G+VYA G+ + G    G+  +  V  P+ V +L +  
Sbjct: 1293 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL-SSGTVPLPRQVTALSSYV 1351

Query: 151  VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
            V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L+   +  IA
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 1410

Query: 209  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
             G  +  AL    S   +Y+ G G  G+LGHG  T +  P++++   LL  + V VA G+
Sbjct: 1411 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDTTTQLKPKMVKV--LLGHRVVQVACGS 1465

Query: 269  WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
              A  +    +G V +WG G +G LG G  E  ++P+ ++ LN      +  G   +  +
Sbjct: 1466 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 1525

Query: 327  SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
            ++ G V+++G G+   LGH +          +V  PQ+V  L+   +++V +++      
Sbjct: 1526 TKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVGA---- 1571

Query: 387  NAHTFALTESGKLYAFGAGDKGQLG 411
              H  A+T+SG++YA+G  D GQ G
Sbjct: 1572 -LHCLAVTDSGQVYAWGDNDHGQQG 1595



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR + +L    + + A 
Sbjct: 1298 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAV 1357

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 1358 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 1414

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    VVQ+A G      LA 
Sbjct: 1415 HSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPK-MVKVLLGHRVVQVACGSRDAQTLAL 1473

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 1474 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 1529

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 1530 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 1587



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 20/277 (7%)

Query: 137  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
            +  P   E+L  + VVQ A G+     ++ EG+VY      + RLG       V     +
Sbjct: 1285 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQV 1344

Query: 197  GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
              L +  V ++A       A A    G  V+S G G  GKLGH SR +   PRLIE  + 
Sbjct: 1345 TALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 1403

Query: 257  LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
              ++   +A G+ H+A +   G + TWG G YG LGHG+   +  PK+V+ L   + + V
Sbjct: 1404 KRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQV 1461

Query: 317  ATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            A G  D  T  ++++G V+S+G G+   LG        G+   N+  PQ +  L    + 
Sbjct: 1462 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNIERLN--GQG 1511

Query: 375  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V QI           + ALT+SG ++ +G GD  +LG
Sbjct: 1512 VCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 1543



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG T  + +P+ ++ L G R++Q A G+   +T+
Sbjct: 1412 GSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTL 1471

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 1472 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 1529

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 1530 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 1585

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 1586 WGDNDHGQQGNGTTTVNRKPTLVQGLE 1612



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 2254 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT--- 2309

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHG+      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 2370 SWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 2429

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   +++
Sbjct: 2430 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVGIACGSG---DAQTLCLTDDDTVWS 2476

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 2477 WGDGDYGKLG 2486



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 1507 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 1561

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 1562 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 1619

Query: 155  AIGN 158
            A G+
Sbjct: 1620 ACGS 1623


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 37/376 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           + ++GS   GQLG G  EE      I++L+   +    AG+  ++ I++ G+++ +G + 
Sbjct: 7   IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +   GTK    P  V++L N+ +VQAAIG +    +  +GR Y +      + G 
Sbjct: 67  RGTLGHPA-GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 184 HTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             E  D    P    +  IP        V Q+AAG  + + L  +     V++     G 
Sbjct: 126 EPEKKDNTGRPPRRDIA-IPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQ 177

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
               G  T    P  ++   ++ L    +A GA+H   + +DG +  WG   YG LG G+
Sbjct: 178 PWPPGDITQISVPVRVQGLDMVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 233

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +  S P  VQ L+ +  + +A G + +  ++++G+VY +G GE   LG         N 
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGD------ND 287

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            ++ + PQ V  L    E +VQIS   +     H+ A+T  G++++FG GD G+LG    
Sbjct: 288 KSSKMVPQKVQLLS--GEEIVQISCGGT-----HSVAVTSDGRMFSFGRGDHGRLGY--- 337

Query: 416 NNQTERGNPERVDIDL 431
             +   G PE V ID+
Sbjct: 338 GRKVTTGQPEEVPIDI 353



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 33/331 (9%)

Query: 27  WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWR 85
           W   ++ L +   C        +AG  +S+A+T  G ++++G N  G LGH   T+ E  
Sbjct: 28  WVCAIKALESQNVCS------VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENV 81

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 137
           P  +++L  ++I+QAA G    + + D G+ YA+G + +G+           G    + +
Sbjct: 82  PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDI 141

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             PQ       + V Q A G   + VL+REG V+T+        G    P D+    +  
Sbjct: 142 AIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDITQISVPV 191

Query: 198 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
            ++ + +V+ IA G  + LAL  Q  G  +++ G    G+LG G       P  ++    
Sbjct: 192 RVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 314
           L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  S  VP+ VQ L+  + +
Sbjct: 249 LTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            ++ G   +  V+ DG ++SFG G+   LG+
Sbjct: 307 QISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 44/231 (19%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +G A+ + G G  G+LG G+  + +    I+  +  N+  VV  AG+ ++  + +DG++ 
Sbjct: 3   AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60

Query: 282 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 336
           TWGW + G LGH    + E+VP  V+AL++VK +  A G +    V + G  Y++G    
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 337 --CGESASLGHNA-------IADGQ-------------GNRHANVLT------------- 361
             CGE      N        IA  Q             G  H+ VLT             
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
           P  +T +  V  RV  + +   I   A H  AL E G L+A+G  + GQLG
Sbjct: 181 PGDITQIS-VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 107
           AG  HS A+T  G VY +G    G+LG G  ++  +  P+ ++ L G  I+Q + G   +
Sbjct: 256 AGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHS 315

Query: 108 MLISDAGQVYAFGKDSFGEAEYG 130
           + ++  G++++FG+   G   YG
Sbjct: 316 VAVTSDGRMFSFGRGDHGRLGYG 338


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 37/376 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           + ++GS   GQLG G  EE      I++L+   +    AG+  ++ I++ G+++ +G + 
Sbjct: 7   IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +   GTK    P  V++L N+ +VQAAIG +    +  +GR Y +      + G 
Sbjct: 67  RGTLGHPA-GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 184 HTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             E  D    P    +  IP        V Q+AAG  + + L  +     V++     G 
Sbjct: 126 EPEKKDNTGRPPRRDIA-IPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQ 177

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
               G  T    P  ++   ++ L    +A GA+H   + +DG +  WG   YG LG G+
Sbjct: 178 PWPPGDITQISVPVRVQGLDMVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 233

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +  S P  VQ L+ +  + +A G + +  ++++G+VY +G GE   LG         N 
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGD------ND 287

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            ++ + PQ V  L    E +VQIS   +     H+ A+T  G++++FG GD G+LG    
Sbjct: 288 KSSKMVPQKVQLLS--GEEIVQISCGGT-----HSVAVTSDGRMFSFGRGDHGRLGY--- 337

Query: 416 NNQTERGNPERVDIDL 431
             +   G PE V ID+
Sbjct: 338 GRKVTTGQPEEVPIDI 353



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 33/331 (9%)

Query: 27  WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWR 85
           W   ++ L +   C        +AG  +S+A+T  G ++++G N  G LGH   T+ E  
Sbjct: 28  WVCAIKALESQNVCS------VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENV 81

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 137
           P  +++L  ++I+QAA G    + + D G+ YA+G + +G+           G    + +
Sbjct: 82  PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDI 141

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             PQ       + V Q A G   + VL+REG V+T+        G    P D+    +  
Sbjct: 142 AIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDITQISVPV 191

Query: 198 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
            ++ + +V+ IA G  + LAL  Q  G  +++ G    G+LG G       P  ++    
Sbjct: 192 RVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 314
           L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  S  VP+ VQ L+  + +
Sbjct: 249 LTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            ++ G   +  V+ DG ++SFG G+   LG+
Sbjct: 307 QISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 44/231 (19%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +G A+ + G G  G+LG G+  + +    I+  +  N+  VV  AG+ ++  + +DG++ 
Sbjct: 3   AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60

Query: 282 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 336
           TWGW + G LGH    + E+VP  V+AL++VK +  A G +    V + G  Y++G    
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 337 --CGESASLGHNA-------IADGQ-------------GNRHANVLT------------- 361
             CGE      N        IA  Q             G  H+ VLT             
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
           P  +T +  V  RV  + +   I   A H  AL E G L+A+G  + GQLG
Sbjct: 181 PGDITQIS-VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 107
           AG  HS A+T  G VY +G    G+LG G  ++  +  P+ ++ L G  I+Q + G   +
Sbjct: 256 AGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHS 315

Query: 108 MLISDAGQVYAFGKDSFGEAEYG 130
           + ++  G++++FG+   G   YG
Sbjct: 316 VAVTSDGRMFSFGRGDHGRLGYG 338


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      GV GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4015 GA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L    VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4129 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4240

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    +E G++Y +G  D+GQLG
Sbjct: 4241 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4285



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288

Query: 409  QLG 411
            Q G
Sbjct: 3289 QQG 3291



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 163/330 (49%), Gaps = 18/330 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I + A  +G 
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P+++ESL+   VV  A G   +A +
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4109

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G      L C     
Sbjct: 4110 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4167

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG
Sbjct: 4168 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P+ VQ L   K I +ATG       SEDG+VY++G  +   LG
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4285

Query: 345  HNAIADGQGNRHANVLTPQLVTSL--KQVN 372
                 DG  N    +  P+LV +L  K+VN
Sbjct: 4286 -----DGTTN---AIQRPRLVAALQGKKVN 4307



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+G  ++  AAG   +  
Sbjct: 4049 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4108

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++ AG +Y +GK  +G   +     +L   P+LVE+L+   VV  A   G+  T  L+ +
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4222

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4223 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4320



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3949 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT--- 4004

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4005 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L   + + VA G   +  V+  GD+Y++G G   
Sbjct: 4065 SWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   +++
Sbjct: 4125 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVWS 4171

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4172 WGDGDYGKLG 4181



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 182/414 (43%), Gaps = 71/414 (17%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           I+ T   +V+ FG NS G+LG G  +E   P  +R    + + Q AAG     +++  G 
Sbjct: 33  ISGTGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGD 92

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTF 173
           V   G +  G+  +G    K +++P+ +ESLKNI +  + +A G    A++S++G++YT 
Sbjct: 93  VLTVGFNGSGQLGHG--NNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTC 150

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-----CQPSGMAVYS 228
            + N  +LGH T+ N   P  L+  L++  V  ++  Y + L +             VYS
Sbjct: 151 GYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
           VG    G+LG      E  P++I     LN + V+  A G  H+  V   G V + G+  
Sbjct: 210 VGRNDNGQLGQEHTCHEITPKIIRS---LNTRQVIQTACGLHHSVFVTVHGEVFSCGFND 266

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--- 344
            G LGH + +  + P ++++L +   +  A G Y T V  + G++Y+FG  +   LG   
Sbjct: 267 NGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIET 326

Query: 345 --------------------------HNAIADGQGN---------------------RHA 357
                                      N +  GQ +                      + 
Sbjct: 327 NGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNL 386

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           N   PQ+    K+VN   +     +SI       AL ESG+L+ FG G+ GQLG
Sbjct: 387 NNQQPQVQYLSKKVNISKIACGCYHSI-------ALCESGQLFTFGRGNHGQLG 433



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 152/307 (49%), Gaps = 31/307 (10%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+ FG++S+GE   G+   +  + P  V     + V Q A GN   AVL+R G V T  +
Sbjct: 41  VFVFGQNSYGE--LGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLG 234
               +LGH    +   P  +  +L+NI +  I+ A  C  LA+  Q   +  Y+ G    
Sbjct: 99  NGSGQLGHGNNKSISTPKKI-ESLKNIRITHISSANGCENLAIISQDGKL--YTCGYNNY 155

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR--------VCTWGWG 286
           G+LGHG++++   P L++   L + Q   V+   +H+ +V QD R        V + G  
Sbjct: 156 GQLGHGTQSNLSTPTLVQA--LKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRN 213

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LG  +   E  PK++++LN  + I  A G + +  V+  G+V+S G  ++  LGHN
Sbjct: 214 DNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHN 273

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                          P L+ SLK  N+ +VQ +     Y+  HT    ++G++YAFG  D
Sbjct: 274 DTKSRN--------QPVLIESLK--NKFIVQAACG---YY--HTLVRRDTGEIYAFGRND 318

Query: 407 KGQLGIE 413
           KGQLGIE
Sbjct: 319 KGQLGIE 325



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 8/279 (2%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           A   +  VYS G N +GQLG   T  E  P+ IRSL   ++IQ A G   ++ ++  G+V
Sbjct: 200 ASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEV 259

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           ++ G +  G+   G   TK    P L+ESLKN F+VQAA G + T V    G +Y F   
Sbjct: 260 FSCGFNDNGQ--LGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRN 317

Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA---CQPSGMAVYSVGCGL 233
           +  +LG  T    +     +     +  +Q + G    L       QPS  ++   G  +
Sbjct: 318 DKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIM 377

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G L   +  + + P++    + +N+  +  A G +H+  + + G++ T+G G +G LG 
Sbjct: 378 QG-LAESNNLNNQQPQVQYLSKKVNISKI--ACGCYHSIALCESGQLFTFGRGNHGQLGQ 434

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
           GN E + +PK V +L+D K I +A G Y T V+ +   V
Sbjct: 435 GNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 10/242 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R+  Q   G  HS+ VT  G V+S G N +GQLGH  T+   +P  I SL+   I+QAA 
Sbjct: 238 RQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAAC 297

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T++  D G++YAFG++  G+      G  L+   Q+ E L  +  +Q + GN    
Sbjct: 298 GYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFL-TVSNIQHSGGNQNQL 356

Query: 163 VLSRE-GRVYTFSWGND-ARLGHHTEPNDV-EPHPLLGTL-ENIPVVQIAAGYCYLLALA 218
              +E  +  + S G   A +    E N++    P +  L + + + +IA G CY     
Sbjct: 357 HSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACG-CYHSIAL 415

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           C+ SG  +++ G G  G+LG G+  D+K P+ +    L + + + +A G +H  V+ +  
Sbjct: 416 CE-SGQ-LFTFGRGNHGQLGQGNTEDQKLPKQVA--SLHDKKVIGIAGGFYHTIVLVKQK 471

Query: 279 RV 280
           +V
Sbjct: 472 KV 473



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 150/325 (46%), Gaps = 30/325 (9%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-DAGQ- 115
           ++  G +Y+ G N+ GQLGHGT      P  +++L+  ++   +     +++++ D  Q 
Sbjct: 141 ISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQA 200

Query: 116 ------VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
                 VY+ G++  G+   G + T    +P+++ SL    V+Q A G   +  ++  G 
Sbjct: 201 SNQQTTVYSVGRNDNGQ--LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGE 258

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V++  + ++ +LGH+   +  +P  L+ +L+N  +VQ A GY + L    +     +Y+ 
Sbjct: 259 VFSCGFNDNGQLGHNDTKSRNQP-VLIESLKNKFIVQAACGYYHTLV---RRDTGEIYAF 314

Query: 230 GCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGR 287
           G    G+LG  +       P+ I++F  L +  +  + G  +    GQ+  +  +   G 
Sbjct: 315 GRNDKGQLGIETNGQALIQPKQIQEF--LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGE 372

Query: 288 YGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G +  G  E  ++    P+V      V    +A G Y +  + E G +++FG G    L
Sbjct: 373 SGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQL 432

Query: 344 GHNAIADGQGNRHANVLTPQLVTSL 368
                  GQGN     L P+ V SL
Sbjct: 433 -------GQGNTEDQKL-PKQVASL 449


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 159/334 (47%), Gaps = 15/334 (4%)

Query: 28   KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
            K  +R  L   A      +Q  AG  H +A+ S G+VYS+G N  GQLG GTT + + P+
Sbjct: 835  KTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQ 894

Query: 88   PIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE---YGVQGTKLVTSPQL 142
            P++    Q  + +Q +AG   +  I    +VY +G +S G+ +   Y         +   
Sbjct: 895  PVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADP 954

Query: 143  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLEN 201
                + +  VQ ++   F   L  +G VYT+ +  + +LG+ T +      +P     ++
Sbjct: 955  DNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQS 1014

Query: 202  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--NL 259
                QI+AG  + LA+    +    ++ G    G+LG GS +D+  P+ ++       +L
Sbjct: 1015 FQASQISAGSWHALAIDTDGN---TWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSL 1071

Query: 260  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ----ALNDVKAIH 315
            +   ++AG  H+ VV +DG +  WGW   G LG GN   ++ P  ++         KA+ 
Sbjct: 1072 KATQISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVR 1131

Query: 316  VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
             + G   +  + +DG+++++G  +   LG+N  A
Sbjct: 1132 SSAGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTA 1165



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 165/393 (41%), Gaps = 36/393 (9%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR------SLQGIRIIQA 100
            Q  AG   SI V S G  Y++G+N  GQL     +   +  P+R      +       Q 
Sbjct: 796  QVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQV 855

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            AAG    + I   G VY++G++  G+   G    +    P      +    VQ + G   
Sbjct: 856  AAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVAD 915

Query: 161  TAVLSREGRVYTFSWGNDAR-LGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGYCYL 214
            +A +  E RVYT  WG+++   G     +    +P      + P      VQ++  + ++
Sbjct: 916  SAAIDSENRVYT--WGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFV 973

Query: 215  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            +AL    +   VY+ G    G+LG+G+     +     +    + Q   ++AG+WHA  +
Sbjct: 974  MALDADGN---VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAI 1030

Query: 275  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDG 330
              DG   TWG+  YG LG G+   +  P+ VQ   D    +KA  ++ G   + VV  DG
Sbjct: 1031 DTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDG 1090

Query: 331  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
             ++++G   +  LG             N +      ++K    +        S     H+
Sbjct: 1091 SLWAWGWNSNGQLG-----------IGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHS 1139

Query: 391  FALTESGKLYAFGAGDKGQLGIELVNNQTERGN 423
             A+ + G L+A+G    GQLG    NNQT   N
Sbjct: 1140 LAIRQDGNLWAWGDNQYGQLG----NNQTATRN 1168



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 182/408 (44%), Gaps = 48/408 (11%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAA 101
           SQ  AG GH +AV S G +YS+GSN  GQLG GTT E   P P++  QG+      +QA+
Sbjct: 237 SQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQAS 296

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIG 157
           AG   ++ +   G++Y++G +++G  + G   T    +P+ V   +N        Q A+G
Sbjct: 297 AGYLFSVGLGSDGKLYSWGDNTYG--QLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVG 354

Query: 158 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL------GTLENIPVVQIAA 209
           +     L  +G +Y  SWG++   +LG  T     E H  +      G        Q++ 
Sbjct: 355 SLHALGLGSDGNLY--SWGDNDHNQLGDGTT---TERHAPIQVKMPSGVPSGFAWKQMSG 409

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLL--NLQPVVVAA 266
              + LAL    S   +Y  G    G++G GS TD K  P  I   Q +  N        
Sbjct: 410 WGWHSLALG---SDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQM 466

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV----KAIHVATGDYT 322
           G +++  +G DG + TWG+G  G +G+G+      P      N V        V+     
Sbjct: 467 GDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVA 526

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ-LVTSLKQVNERVVQISLT 381
           +  +  DG++YS+G   +  LG N     Q N    V  PQ   T L  V          
Sbjct: 527 SLAIGSDGNLYSWGANNNGQLGDNTTT--QRNTPIRVAAPQNAPTGLTWVQA-------- 576

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            S  W+ ++F L   G LY++G    GQLG    N   +R  P RV++
Sbjct: 577 -SAGWDNNSFGLASDGNLYSWGKNANGQLGDNTTN---DRHIPGRVNM 620



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 170/414 (41%), Gaps = 76/414 (18%)

Query: 58  VTSKGVVYSFGS---NSSGQLGHGTTEEEWRPRPIRSL--------------QGIRIIQA 100
           + S  V Y F     N      H T  + W   P++                +GIR  Q 
Sbjct: 180 IGSTPVAYDFNQPVINDMNLTAHWTKADAWSMSPVQGPVAGGTKVTLTPPGPRGIRFSQV 239

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK----LVTSPQLVESLKNIFVVQAAI 156
           +AG G  + ++  G +Y++G +  G+   G    +     V  PQ V   ++   VQA+ 
Sbjct: 240 SAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVS--QDFTWVQASA 297

Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV----VQIAAG 210
           G  F+  L  +G++Y  SWG++   +LG++T      P P +   +N P      Q A G
Sbjct: 298 GYLFSVGLGSDGKLY--SWGDNTYGQLGNNTTTAHYTPEP-VNLPQNAPSGFTWKQEAVG 354

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--- 267
             + L L    S   +YS G     +LG G+ T+   P  ++        P  V +G   
Sbjct: 355 SLHALGLG---SDGNLYSWGDNDHNQLGDGTTTERHAPIQVK-------MPSGVPSGFAW 404

Query: 268 ------AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-----NDVKAIHV 316
                  WH+  +G D  +  WG    G +G G+     +  V  A      ++      
Sbjct: 405 KQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQF 464

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA---NVLTPQLVTSLKQVNE 373
             GDY +  +  DG++Y++G G + ++G+ +  D  G   A   N + P    S KQV+ 
Sbjct: 465 QMGDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNF--SWKQVSL 522

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             V             + A+   G LY++GA + GQLG    N  T+R  P RV
Sbjct: 523 LSVA------------SLAIGSDGNLYSWGANNNGQLGD---NTTTQRNTPIRV 561



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 12/166 (7%)

Query: 264  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDY 321
            VAAG  H   +G +G V +WG   +G LG G       P+ V+       KA+ V+ G  
Sbjct: 855  VAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVA 914

Query: 322  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
             +  +  +  VY++G   +      A +  + N      TP             VQ+SL 
Sbjct: 915  DSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNP-----TPAADPDNPGQTLHAVQVSLN 969

Query: 382  NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             S        AL   G +Y +G    GQLG    ++ +   NP R+
Sbjct: 970  WSF-----VMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARL 1010


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      GV GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4014 GA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L    VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4239

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    +E G++Y +G  D+GQLG
Sbjct: 4240 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4284



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288

Query: 409  QLG 411
            Q G
Sbjct: 3289 QQG 3291



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 163/330 (49%), Gaps = 18/330 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I + A  +G 
Sbjct: 3991 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4050

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P+++ESL+   VV  A G   +A +
Sbjct: 4051 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4108

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G      L C     
Sbjct: 4109 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4166

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG
Sbjct: 4167 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P+ VQ L   K I +ATG       SEDG+VY++G  +   LG
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4284

Query: 345  HNAIADGQGNRHANVLTPQLVTSL--KQVN 372
                 DG  N    +  P+LV +L  K+VN
Sbjct: 4285 -----DGTTN---AIQRPRLVAALQGKKVN 4306



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+G  ++  AAG   +  
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4107

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++ AG +Y +GK  +G   +     +L   P+LVE+L+   VV  A   G+  T  L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4165

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4221

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3283



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3281

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT--- 4003

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4004 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L   + + VA G   +  V+  GD+Y++G G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   +++
Sbjct: 4124 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVWS 4170

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4171 WGDGDYGKLG 4180



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4000 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4057

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  + VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4058 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4113

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L++  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4114 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4173

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             +P  + +L  +    V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4174 KIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4225

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4226 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4270



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 175/366 (47%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3968 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4027

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ + VV  A
Sbjct: 4028 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4085

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ +A G     
Sbjct: 4086 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4144

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L      M V+S G G  GKLG G     K P  I+   L  L    V  G+  +  + 
Sbjct: 4145 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKIPMKID--SLTGLGVTKVECGSQFSVALT 4201

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4202 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4261

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 4262 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 4311

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4312 AGKLPA 4317



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 176/357 (49%), Gaps = 26/357 (7%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G++YA
Sbjct: 2942 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3001

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++  G
Sbjct: 3002 CGEATNGRLGLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3060

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+
Sbjct: 3061 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 3116

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG    +  P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 3117 LGHGDNATQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3174

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH         
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT------- 3227

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3228 -DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3276



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 40/293 (13%)

Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +G+ G KL   V+ P   +SL ++ V Q         +LS  G VYT ++ +        
Sbjct: 414 WGLLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKS-------- 465

Query: 186 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
               + P  L+ +L +  +V++AA   G  Y LAL+   S   V+S GCG GG+LGHG  
Sbjct: 466 --TTLAPM-LIHSLSSRKIVKLAAHPDGQHY-LALS---SNGEVFSWGCGDGGRLGHGDA 518

Query: 243 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           T  + P +I  F  +      V +A G+ ++AV+  DG + TWG G YG LGHG+ E ++
Sbjct: 519 TYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQT 578

Query: 301 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            P +V AL  +K + VA  +GD  T  V+E+G V+S+G G+   LG    +DG       
Sbjct: 579 TPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG------- 630

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             TP+LV  L+ ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 631 CKTPKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 676



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 39/346 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
           P   +SL  + + Q        +++S +G VY              Q  K  T +P L+ 
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 474

Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 198
           SL +  +V+ A    G  + A LS  G V+++  G+  RLGH       EP  +    G 
Sbjct: 475 SLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGK 533

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y   +        +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 534 QAGKHVVHIACGSTYSAVITIDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 590

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  
Sbjct: 591 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VY++G G++  LGH            +V  P+L+ +L+   ++VV +
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRFPKLLDTLQ--GKKVVDV 700

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
           ++ ++     H  ALT+ G+++++G+ DK Q    L N +  +  P
Sbjct: 701 AVGST-----HCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKALP 741



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 108/169 (63%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S  +T  G +Y++G  + G+LGHG++E++  P  + +L+G++++  A G+G  +T+
Sbjct: 545 GSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 604

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+LVE L+++ +V+   G+ F+  L+++G
Sbjct: 605 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 662

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH T+ +   P  LL TL+   VV +A G  + LAL
Sbjct: 663 QVYTWGKGDNQRLGHGTDEHVRFPK-LLDTLQGKKVVDVAVGSTHCLAL 710



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G +Y+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2979 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 3038

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3039 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3096

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +Y++  G   RLGH      + P  L+  L    V+Q+A G      LA  
Sbjct: 3097 SAAITSSGELYSWGLGEYGRLGHGDNATQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3155

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3156 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3211

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P++V+ L   K +HVA G      V++ G VY++G
Sbjct: 3212 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3268



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 3040 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3099

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y++G   +G   +G   T+L   P+LV+ L    V+Q A G  +  T  L+ E
Sbjct: 3100 ITSSGELYSWGLGEYGRLGHGDNATQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3157

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 3158 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3209

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +    + V VA GA H   V   G+V  
Sbjct: 3210 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYA 3266

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3303



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A++S G V+S+G    G+LGHG       P  I +  G +    ++  A G+  + +
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAV 551

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T+P LV +LK + VV  A   G+  T  ++  
Sbjct: 552 ITIDGELYTWGRGNYGRLGHGSSEDQ--TTPMLVTALKGLKVVDVACGSGDAQTLAVTEN 609

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 610 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 665

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           + G G   +LGHG+    + P+L++  Q    + V VA G+ H   +  DG V +WG
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTLQ--GKKVVDVAVGSTHCLALTDDGEVHSWG 720



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3933 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 3989

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3990 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4048

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 4049 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4108

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 4109 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 4155

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4156 SWGDGDYGKLG 4166



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 83/150 (55%), Gaps = 7/150 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ +  LQ + I++   G+  ++ 
Sbjct: 598 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 657

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  GQVY +GK   G+ +    GT + V  P+L+++L+   VV  A+G+     L+ +G
Sbjct: 658 LTKDGQVYTWGK---GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDG 714

Query: 169 RVYTFSWGNDARLGH-HTEPNDVEPHPLLG 197
            V+  SWG++ +L H  T  N  +P  L G
Sbjct: 715 EVH--SWGSNDKLQHFDTLSNKKQPKALPG 742



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3188 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3242

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3243 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3300

Query: 155  AIGN 158
            A G+
Sbjct: 3301 ACGS 3304



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 3/110 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   S+A+T  G VY++G   + +LGHGT E    P+ + +LQG +++  A G+   + +
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLAL 710

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           +D G+V+++G +   +    +   K    P+ +  LK+I  +    G  F
Sbjct: 711 TDDGEVHSWGSNDKLQHFDTLSNKK---QPKALPGLKHIVGISCGPGQSF 757


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 22/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            GV++ +G N  GQLG     +        +L  +R +Q   G      ++  G+VYA G 
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+E+L+++ V Q A+  G      L+  G V+++  G+D 
Sbjct: 3679 GA--GGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDG 3736

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH ++     P  L+ +L +  VV +A G  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3737 KLGHGSKALCERPK-LIESLRDKHVVSVACGGAHS---ACITASGELYTWGKGRYGRLGH 3792

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+ +E+    N+  V   +G      V +DG V +WG G YG LG G  +  
Sbjct: 3793 GDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGC 3852

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
              P+ + +L +   I V  G   +  ++  G VY++G G+   LGH +          +V
Sbjct: 3853 KFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGS--------EDHV 3904

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              PQ V    Q  +RV+Q+++      + H  A T+SG+++ +G  D+GQLG
Sbjct: 3905 RRPQAVQGALQ-GKRVIQVAVG-----SLHCVACTDSGEVFTWGDNDEGQLG 3950



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 167/349 (47%), Gaps = 17/349 (4%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G     A+TS G VY+ G  + G+LG G TE    P  I +LQ + + Q A  +G 
Sbjct: 3656 QIVGGEQTLFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGG 3715

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + ++ +G V+++G+   G+  +G +   L   P+L+ESL++  VV  A G   +A +
Sbjct: 3716 KHCLALTSSGDVFSWGEGDDGKLGHGSKA--LCERPKLIESLRDKHVVSVACGGAHSACI 3773

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P   +  L    V+ +A G      L     G+
Sbjct: 3774 TASGELYTWGKGRYGRLGHGDSEDQLKPKK-VEELAGHNVLDVACGSGDAQTLCVSRDGL 3832

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P+ I+  Q  N   + V  G+  +  +   G V TWG
Sbjct: 3833 -VWSWGDGDYGKLGRGGSDGCKFPQKIDSLQ--NAGVIKVECGSQFSVALTAAGVVYTWG 3889

Query: 285  WGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
             G Y  LGHG+E+    P+ VQ AL   + I VA G       ++ G+V+++G  +   L
Sbjct: 3890 KGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQL 3949

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            G     DG  N    +  P+LV SLK      V     +++ W+    A
Sbjct: 3950 G-----DGSTN---AIQRPKLVASLKGKKMNRVACGSAHTVSWSTSKSA 3990



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 32/385 (8%)

Query: 32   RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
            RFL A E  C+      +  P     +  K  V+ +G N   QLG     +   P+    
Sbjct: 2625 RFL-AQETECKLGIVNQMGSPSMRENIECK--VFVWGLNDKDQLGGLKGSKIKEPKFSEV 2681

Query: 92   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
            +  ++ +  A G+    ++S  G+V+A G+ + G    G+  +  V  P+ +  L   F+
Sbjct: 2682 ISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGR--LGLGHSHNVAQPKPLTDLSPYFI 2739

Query: 152  VQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
             + A+  G      L+ +GRV+++  G D +LGH  + +   P  L+ +L+   +  +A 
Sbjct: 2740 KKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPK-LVESLKCKRIRDVAC 2798

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGA 268
            G  +  A+    S   +Y+ G G  G+LGHG    +  P+   Q + L+ + VV VA G+
Sbjct: 2799 GSSHSAAVT---SSGELYTWGSGEYGRLGHGDNVPQLKPK---QVRALSHERVVQVACGS 2852

Query: 269  WHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
              A  +    R  V +WG G +G LG G  +  S+P+ V+ LN  + I V  G   +  +
Sbjct: 2853 RDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL 2912

Query: 327  SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
            S++G V+++G G+   LGH +         ++V  PQ+V  L   N  V+Q+S+      
Sbjct: 2913 SKNGKVWTWGKGDYFRLGHGS--------DSHVRWPQVVEELADKN--VIQVSVGA---- 2958

Query: 387  NAHTFALTESGKLYAFGAGDKGQLG 411
              H  A+T+ G++YA+G  D GQ G
Sbjct: 2959 -LHCIAVTDRGEVYAWGDNDHGQQG 2982



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 168/344 (48%), Gaps = 21/344 (6%)

Query: 49   IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-- 105
            IAG   S+ + S  G V++ G  ++G+LG G +    +P+P+  L    I + A  +G  
Sbjct: 2690 IAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGR 2749

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + +     P+LVESLK   +   A G+  +A ++
Sbjct: 2750 HALALTIDGRVFSWGEGEDGKLGHGNKIS--YDRPKLVESLKCKRIRDVACGSSHSAAVT 2807

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  +   L +  VVQ+A G      LA       
Sbjct: 2808 SSGELYTWGSGEYGRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHW- 2865

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
            VYS G G  GKLG G       P+ +E    LN Q V+ V  GA  +  + ++G+V TWG
Sbjct: 2866 VYSWGDGDFGKLGKGGSDGSSLPQNVET---LNSQQVIQVECGAQFSLALSKNGKVWTWG 2922

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG++     P+VV+ L D   I V+ G      V++ G+VY++G  +     
Sbjct: 2923 KGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQ-- 2980

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
                  G GN   N   P +V  L+ +    V    ++S+ W++
Sbjct: 2981 -----QGNGNTTVN-RKPAIVRGLEAITN--VACGSSHSVAWSS 3016



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 125/311 (40%), Gaps = 80/311 (25%)

Query: 164  LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            ++R    +T SWG    +   GH+        E   V+   +   L  +  VQI  G   
Sbjct: 3604 VNRSPDEWTLSWGGSGVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQT 3663

Query: 214  LLALACQPSGMA------------------------------VYSVGCGLGGK------- 236
            L AL       A                              V  V    GGK       
Sbjct: 3664 LFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTS 3723

Query: 237  --------------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                          LGHGS+   + P+LIE  +  +   V VA G  H+A +   G + T
Sbjct: 3724 SGDVFSWGEGDDGKLGHGSKALCERPKLIESLR--DKHVVSVACGGAHSACITASGELYT 3781

Query: 283  WGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            WG GRYG LGHG+ E +  PK V+ L  ++V  +   +GD  T  VS DG V+S+G G+ 
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDY 3841

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LG    +DG          PQ + SL+  N  V+++   +       + ALT +G +Y
Sbjct: 3842 GKLGRGG-SDG-------CKFPQKIDSLQ--NAGVIKVECGSQF-----SVALTAAGVVY 3886

Query: 401  AFGAGDKGQLG 411
             +G GD  +LG
Sbjct: 3887 TWGKGDYHRLG 3897



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%)

Query: 45   NSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
            NSQ +     G   S+A++  G V+++G     +LGHG+      P+ +  L    +IQ 
Sbjct: 2895 NSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQV 2954

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
            + GA   + ++D G+VYA+G +  G+   G   T +   P +V  L+ I
Sbjct: 2955 SVGALHCIAVTDRGEVYAWGDNDHGQQGNG--NTTVNRKPAIVRGLEAI 3001


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             ++ +G N  GQLG         P P  +L  +R IQ A G      ++  G++YA G  
Sbjct: 3938 TIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 3997

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            +      G+ GT  V++P LVESL+++ + + A+  G      LS +G V+++  G D +
Sbjct: 3998 A--GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4055

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  I V+ IA G  +    AC  S   V + G G  G+LGHG
Sbjct: 4056 LGHGNRDSYDRPK-LIEALSGIGVIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHG 4111

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4112 DSEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4169

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  ++  G VY++G G+   LGH       GN   +
Sbjct: 4170 CKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-H 4221

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++SG+++ +G  D+GQLG
Sbjct: 4222 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVFTWGDNDEGQLG 4267



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 25/356 (7%)

Query: 58   VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
            ++SK +V+  G N   QLG     +   P     L  ++ I  A G+    ++S  G++Y
Sbjct: 2890 ISSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 2947

Query: 118  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSW 175
            A G+ + G    G+     V +P+ V  L    V + A+  G      L+ +G+V+++  
Sbjct: 2948 ACGEGTNGR--LGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3005

Query: 176  GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            G D +LGH       +P  L+ +L    V  IA G  +  A+    S   +Y+ G G  G
Sbjct: 3006 GEDGKLGHGNRLTLEKPK-LIESLRTKRVRDIACGSSHSAAIT---SSGELYTWGLGEYG 3061

Query: 236  KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
            +LGHG    +  P+L+   Q   +  V   +       + ++G V +WG G +G LG G 
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG 3121

Query: 296  EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
             E  SVP  V+ LN V  + +  G   +  +++ G+V+++G G+   LGH        ++
Sbjct: 3122 SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT------DQ 3175

Query: 356  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            H    TP  +  L+   ++V+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3176 HVRKPTP--IQGLR--GKKVIHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 3222



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 165/340 (48%), Gaps = 23/340 (6%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
            AVT  G +Y+ G  + G+LG G T+    P  + SLQ + I + A  +G    + +S  G
Sbjct: 3984 AVTPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDG 4043

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            +V+++G+   G+  +G + +     P+L+E+L  I V+  A G+  +A ++ +G V T+ 
Sbjct: 4044 EVFSWGEGEDGKLGHGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4101

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G   RLGH    + ++P  L+  L     + IA G      L C      V+S G G  
Sbjct: 4102 KGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDY 4159

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            GKLG G     K P  IE   L  L  + V  G+  +  + + G V TWG G Y  LGHG
Sbjct: 4160 GKLGRGGSDGCKIPMKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4217

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
            N +    PK V AL   K I +ATG       S+ G+V+++G  +   LG   +   Q  
Sbjct: 4218 NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQ-- 4275

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
                   P+LV SL+   + +V++     I  +AHT AL+
Sbjct: 4276 ------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4302



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 12/273 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +P+ I SL+  R+   A G+  +  
Sbjct: 2986 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAA 3045

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P+LV +L+   VVQ A G  +  T  L+ E
Sbjct: 3046 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTTLQGHRVVQVACGSRDAQTLCLTEE 3103

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G V+++  G+  +LG         PH  +  L ++ V+QI  G  + LAL    SG  V+
Sbjct: 3104 GLVFSWGDGDFGKLGRGGSEGCSVPHQ-VERLNSVGVMQIECGAQFSLALT--KSG-EVW 3159

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
            + G G   +LGHG+   ++H R     Q L  + V+ VA GA H   V   G+V  WG  
Sbjct: 3160 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3216

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
             +G  G GN      P +V  L+ V    VA G
Sbjct: 3217 DHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S G V+S+G    G+LGHG  +   RP+ I +L GI +I  A G+  +  
Sbjct: 4031 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSAC 4090

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  G V  +GK  +G   +G    +L   P+LVE+L     +  A   G+  T  ++ +
Sbjct: 4091 ITSQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGYRAIDIACGSGDAQTLCITDD 4148

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V+++  G  + +AL    SG +VY
Sbjct: 4149 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 4204

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P+ +   Q    + + +A G+ H       G V TWG   
Sbjct: 4205 TWGKGDYHRLGHGNTDHVRRPKKVAALQ--GKKIISIATGSLHCVACSDSGEVFTWGDND 4262

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++VQ+L     + V  G   T  +S
Sbjct: 4263 EGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 137/306 (44%), Gaps = 27/306 (8%)

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA--VLSREG 168
           S + +++  G  S     YG        + QL+ S+         + +      V   E 
Sbjct: 474 SKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTEN 533

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +Y  + G      H     ++ P    G LE + VVQIAA +C    +    S   V+S
Sbjct: 534 NIYILTTGGQVFSLHSNSSENIAPKAFEG-LEGVHVVQIAA-HCEGKHVMVLSSANEVWS 591

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G GG+LGHG    ++HP +I    L   Q   +  GA ++A +   G + TWG G Y
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMI--VGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY 649

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           G LGHGN + + VP  VQAL   K + VA  +GD  +  V+++G ++++G G+   LG N
Sbjct: 650 GRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLG-N 708

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAG 405
              +G          P  + +L  V+           IY  +  + AL+  G LY +G G
Sbjct: 709 GSCNGSP-------IPVQIDTLVNVSR----------IYSGSQFSVALSCDGTLYTWGKG 751

Query: 406 DKGQLG 411
             G+LG
Sbjct: 752 HGGRLG 757



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 34/318 (10%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
           +++ Q A       +++  GQV++   +S               +P+  E L+ + VVQ 
Sbjct: 523 LQVRQVACTENNIYILTTGGQVFSLHSNSSEN-----------IAPKAFEGLEGVHVVQI 571

Query: 155 A--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           A         VLS    V+++  G+  RLGH    +   P  ++G  E     Q+   YC
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEK----QVCGIYC 627

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
                A       +++ G G  G+LGHG+  D+  P  ++  +   +  V + +G  H+ 
Sbjct: 628 GASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSM 687

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            V  +G +  WG G +G LG+G+  C   P  VQ    V    + +G   +  +S DG +
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNGS--CNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGTL 745

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           Y++G G    LGH        + H+NV  P+LV +L+   +++  +++      +AH  A
Sbjct: 746 YTWGKGHGGRLGHG------NSEHSNV--PKLVRALE--GKKIADVAVG-----SAHCLA 790

Query: 393 LTESGKLYAFGAGDKGQL 410
           LT SG+LY +G  D  Q+
Sbjct: 791 LTSSGELYGWGRNDYQQI 808



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 19/281 (6%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTMLISDAGQ 115
           +T+ G V+S  SNSS         E   P+    L+G+ ++Q AA       M++S A +
Sbjct: 538 LTTGGQVFSLHSNSS---------ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANE 588

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+++G    G   +G   +K    P ++  L    V     G  ++A ++  G ++T+  
Sbjct: 589 VWSWGAGDGGRLGHGDTVSK--EHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGR 646

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
           G   RLGH    + + P  +   L++  VV +A G     ++    +G+ +++ G G  G
Sbjct: 647 GTYGRLGHGNSDDKLVPTQV-QALKSYKVVDVALGSGDAHSMCVTDNGL-LFAWGDGDFG 704

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           KLG+GS      P  I+   L+N+  +   +G+  +  +  DG + TWG G  G LGHGN
Sbjct: 705 KLGNGSCNGSPIPVQIDT--LVNVSRIY--SGSQFSVALSCDGTLYTWGKGHGGRLGHGN 760

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            E  +VPK+V+AL   K   VA G      ++  G++Y +G
Sbjct: 761 SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 124/237 (52%), Gaps = 16/237 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H + ++S   V+S+G+   G+LGHG T  +  P  I  L   ++     GA  +  I+ A
Sbjct: 579 HVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIA 638

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G+++ +G+ ++G   +G    KLV  P  V++LK+  VV  A+  G+  +  ++  G ++
Sbjct: 639 GELFTWGRGTYGRLGHGNSDDKLV--PTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLF 696

Query: 172 TFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+ +   +  P P+ + TL N  V +I +G  + +AL+C  +   +Y+ G
Sbjct: 697 AWGDGDFGKLGNGS--CNGSPIPVQIDTLVN--VSRIYSGSQFSVALSCDGT---LYTWG 749

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G GG+LGHG+      P+L+   +   +    VA G+ H   +   G +  +GWGR
Sbjct: 750 KGHGGRLGHGNSEHSNVPKLVRALEGKKIAD--VAVGSAHCLALTSSGEL--YGWGR 802



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 9/171 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G ++++G  + G+LGHG ++++  P  +++L+  +++  A G+G   +M
Sbjct: 628 GASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSM 687

Query: 109 LISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            ++D G ++A+G   FG+   G   G+ +   P  +++L N+  + +  G+ F+  LS +
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNGSCNGSPI---PVQIDTLVNVSRIYS--GSQFSVALSCD 742

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           G +YT+  G+  RLGH    +   P  L+  LE   +  +A G  + LAL 
Sbjct: 743 GTLYTWGKGHGGRLGHGNSEHSNVPK-LVRALEGKKIADVAVGSAHCLALT 792



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHGT +   +P PI+ L+G ++I  A GA  
Sbjct: 3141 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3200

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS- 165
             + ++D+GQVYA+G +  G+   G   T +   P LV  L  +FV + A G+  +   S 
Sbjct: 3201 CLAVTDSGQVYAWGDNDHGQQ--GSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3258

Query: 166  -------REGRVYTFSWGNDARLGHH--TEPNDVEP---HPLLGTL 199
                    +     F+   D   GH      +D EP   HP +GT+
Sbjct: 3259 PQNPSEKDKKEPVPFAVSKDPLGGHSLGIHASDTEPTTAHPQVGTV 3304



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 52/355 (14%)

Query: 102 AGAGRTMLISDAGQVYAFGKDS------FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           AGA    L+    Q+ +FG  S      FG  E  +   + +T P+      N+ + QAA
Sbjct: 393 AGAPLVSLLKRYEQIESFGSYSAVDSFHFGPTESFL---RFLTLPE--NETTNVDLKQAA 447

Query: 156 I----------------GNFFTAV-LSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLL 196
           +                GN+ T V  S+  +++T  W +      G  +E  +     L+
Sbjct: 448 VIIISHLDRLAKPHLPAGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQ-LM 506

Query: 197 GTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           G++       I       +  +AC  + + + + G  +     H + ++   P+  E  +
Sbjct: 507 GSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSL--HSNSSENIAPKAFEGLE 564

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
            +++  +       H  V+     V +WG G  G LGHG+   +  P ++  L++ +   
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624

Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
           +  G   +  ++  G+++++G G    LGH    D         L P  V +LK    +V
Sbjct: 625 IYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDK--------LVPTQVQALKSY--KV 674

Query: 376 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
           V ++L +    +AH+  +T++G L+A+G GD G+LG     N +  G+P  V ID
Sbjct: 675 VDVALGSG---DAHSMCVTDNGLLFAWGDGDFGKLG-----NGSCNGSPIPVQID 721



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+  +G   S+A++  G +Y++G    G+LGHG +E    P+ +R+L+G +I   A G+ 
Sbjct: 727 SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSA 786

Query: 106 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLV 143
             + ++ +G++Y +G++ + +    GV    ++ SP L 
Sbjct: 787 HCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILT 825



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 12/166 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+ VT  G+++++G    G+LG+G+      P P++    + + +  +G+  ++ 
Sbjct: 681 SGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS--PIPVQIDTLVNVSRIYSGSQFSVA 738

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S  G +Y +GK   G   +G   ++    P+LV +L+   +   A+G+     L+  G 
Sbjct: 739 LSCDGTLYTWGKGHGGRLGHG--NSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGE 796

Query: 170 VYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
           +Y   WG ND +      P+ V   P++ +  L   P ++I+   C
Sbjct: 797 LY--GWGRNDYQ---QICPSGVSRDPIIHSPILTTPPTLRISGMTC 837


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 166/350 (47%), Gaps = 23/350 (6%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            VY +G N  GQLG     +   P P  +L  +  +Q   G      ++  G+VYA G  +
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G   +  V+ P L+ S++++F+ + A   G      LS +G VY++  G D +L
Sbjct: 4013 GGRLGIGGIDS--VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKL 4070

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    +   P  L+  L  + VV IA G  +    AC  +   +Y+ G G  G+LGHG 
Sbjct: 4071 GHGNRVSYDRPK-LITALSGLEVVCIACGGAHS---ACLTARGRIYTWGKGRYGRLGHGD 4126

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
              D+  P+L+E      +  V   +G      +  D  V +WG G YG LG G  E   +
Sbjct: 4127 SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKL 4186

Query: 302  PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
            P  +  L  ++ I V  G   +  + + G VY++G G+   LGH +        + +V  
Sbjct: 4187 PMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGS--------YEHVRR 4238

Query: 362  PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P  VT ++   + +V I+ T S+    H  A T++G++Y +G  D+GQLG
Sbjct: 4239 PMRVTGMQ--GKMIVSIA-TGSL----HCVACTDTGEVYTWGDNDEGQLG 4281



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 170/352 (48%), Gaps = 27/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N   QLG     +   P    +L  +R +  A G+    ++S  G+++A G+ +
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEGT 3118

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+  +  V++P+    L ++ V + A+  G      L+ +G+VY++  G D +L
Sbjct: 3119 NGR--LGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKL 3176

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH        P  L+ +L    V+ IA G  +    AC  +   +Y+ G G  G+LGHG 
Sbjct: 3177 GHGNRITLEAPR-LIESLAGERVISIACGSAHS---ACVTARGHLYTWGLGEYGRLGHGD 3232

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD--GRVCTWGWGRYGCLGHGNEECE 299
               +  P+++E   L N + + VA G+  A  +     G+V +WG G +G LG G  +  
Sbjct: 3233 DNIQLVPKMVEA--LANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGC 3290

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            ++P  V+ LN +    V  G   +  ++ DG+V+++G G+   LGH           A+V
Sbjct: 3291 AIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGC--------DAHV 3342

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P LV +L+    RV+ +++        H  A+T   +++A+G  D GQ G
Sbjct: 3343 RRPTLVEALR--GRRVIHVAVG-----ALHCLAVTSENQVWAWGDNDHGQQG 3387



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)

Query: 49   IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   ++ + S  G +++ G  ++G+LG G +     PR  P  S   +R +   +G  
Sbjct: 3095 IAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGK 3154

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+VY++G+   G+  +G + T  + +P+L+ESL    V+  A G+  +A ++
Sbjct: 3155 HALALTADGKVYSWGEGEDGKLGHGNRIT--LEAPRLIESLAGERVISIACGSAHSACVT 3212

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH  +   + P  ++  L N  V+Q+A G      LA    G  
Sbjct: 3213 ARGHLYTWGLGEYGRLGHGDDNIQLVPK-MVEALANYRVIQVACGSRDAQTLALTACG-K 3270

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  +E+   L +    V  GA  +  + +DG V TWG 
Sbjct: 3271 VFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGV--TQVECGAQFSLALTRDGEVWTWGK 3328

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G Y  LGHG +     P +V+AL   + IHVA G      V+ +  V+++G
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWG 3379



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 8/324 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G     AVT  G VY+ G  + G+LG G  +   +P  + S+Q + I + A  +G 
Sbjct: 3988 QLVGGEQTLFAVTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGG 4047

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G + +     P+L+ +L  + VV  A G   +A L
Sbjct: 4048 KHCLALSADGEVYSWGEGEDGKLGHGNRVS--YDRPKLITALSGLEVVCIACGGAHSACL 4105

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  GR+YT+  G   RLGH    + + P  L+  L +  V+ +A G      L C     
Sbjct: 4106 TARGRIYTWGKGRYGRLGHGDSEDQLIPK-LVEALSSFRVIDVACGSGDAQTL-CITDDD 4163

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  I+  +   L+ + V  G+  +  + Q G V TWG
Sbjct: 4164 NVWSWGDGDYGKLGRGGSEGCKLPMRIDCLK--GLRVIKVECGSQFSVALCQCGSVYTWG 4221

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+ E    P  V  +     + +ATG       ++ G+VY++G  +   LG
Sbjct: 4222 KGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG 4281

Query: 345  HNAIADGQGNRHANVLTPQLVTSL 368
                   Q  R    L   ++ +L
Sbjct: 4282 DGTTLAAQRPRLLMALQVNIIPTL 4305



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 20/270 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T+ G VYS+G    G+LGHG       PR I SL G R+I  A G+  +  
Sbjct: 3151 SGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSAC 3210

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            ++  G +Y +G   +G   +G    +LV  P++VE+L N  V+Q A G  +  T  L+  
Sbjct: 3211 VTARGHLYTWGLGEYGRLGHGDDNIQLV--PKMVEALANYRVIQVACGSRDAQTLALTAC 3268

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G+V+++  G+  +LG         P +VE       L ++ V Q+  G  + LAL     
Sbjct: 3269 GKVFSWGDGDFGKLGRGGSDGCAIPMNVE------RLNSLGVTQVECGAQFSLALT---R 3319

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
               V++ G G   +LGHG     + P L+E  +    + + VA GA H   V  + +V  
Sbjct: 3320 DGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWA 3377

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVK 312
            WG   +G  G+G       P +V  +  V+
Sbjct: 3378 WGDNDHGQQGNGTTCVNRRPALVAGVEGVQ 3407



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 19/263 (7%)

Query: 86  PRPIRSLQGIRIIQAAAGA-GRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P  +  L+   I Q +  + GR  L  S  G  +++G    G   +G   T    +PQ +
Sbjct: 514 PHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHG--DTAARDAPQPL 571

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             L +  VV+ A G   +AV++  G +YT+  G   RLGH T  N + P P+     NI 
Sbjct: 572 HHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIE 631

Query: 204 -VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            ++ +A G+     L C   G AV   G G  G            PR +    +  +  V
Sbjct: 632 RIIDVALGWGEGSTLCCTWEG-AVQVFGEGEAGT-----------PRALSALAMFRVTRV 679

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
                 WHAA+    G+V TWG G    LGHGN E   +PK+V+AL  +K + ++ G   
Sbjct: 680 YTGE-HWHAALT-DGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASH 737

Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
              +S +G ++ +G  E   + +
Sbjct: 738 GIALSSEGVLFVWGTHERTQISN 760



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 26/279 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +  +S G  +S+G    G+LGHG T     P+P+  L    +++ AAG   + +I+  
Sbjct: 536 HYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSR 595

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           G +Y +G+ + G   +G     L   P      +++ I  V    G   T   + EG V 
Sbjct: 596 GALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQ 655

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            F  G          P        L  L    V ++  G  +  AL     G  VY+ G 
Sbjct: 656 VFGEGEAG------TPR------ALSALAMFRVTRVYTGEHWHAALT---DGGQVYTWGK 700

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G +LGHG+    K P+L+E  Q + +  V ++ GA H   +  +G +  WG       
Sbjct: 701 GDGYRLGHGNMESTKIPKLVEALQGIKI--VDLSLGASHGIALSSEGVLFVWG------T 752

Query: 292 GHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVVSED 329
               +    VP+ V+A N   KA  V++G    F  SE+
Sbjct: 753 HERTQISNPVPQPVKAFNPSFKANGVSSGPTQIFAWSEE 791



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 52/273 (19%)

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L +I + Q A       +L+ +G VYT  +            + + PH L+  LE+  + 
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYTLPY------------DTMTPH-LVPGLESKTIT 526

Query: 206 QIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
           Q++    G  YL    C+ S    +S G G  G+LGHG       P+ +    L + + V
Sbjct: 527 QVSCHSLGRHYL----CRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHH--LAHHEVV 580

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATG- 319
            VAAG   +AV+   G + TWG G  G LGHG  E    P+ V   A N  + I VA G 
Sbjct: 581 RVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGW 640

Query: 320 -DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
            + +T   + +G V  FG GE+                    TP+ +++L     RV ++
Sbjct: 641 GEGSTLCCTWEGAVQVFGEGEAG-------------------TPRALSALAMF--RVTRV 679

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +W+A   ALT+ G++Y +G GD  +LG
Sbjct: 680 YTGE--HWHA---ALTDGGQVYTWGKGDGYRLG 707



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 18/175 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGI-RIIQAAA--GAG 105
           AG   S  +TS+G +Y++G  + G+LGHGT E    P+P+  +   I RII  A   G G
Sbjct: 584 AGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEG 643

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+  +  G V       FGE E G        +P+ + +L    V +   G  + A L+
Sbjct: 644 STLCCTWEGAVQV-----FGEGEAG--------TPRALSALAMFRVTRVYTGEHWHAALT 690

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             G+VYT+  G+  RLGH    +   P  L+  L+ I +V ++ G  + +AL+ +
Sbjct: 691 DGGQVYTWGKGDGYRLGHGNMESTKIPK-LVEALQGIKIVDLSLGASHGIALSSE 744



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 13/133 (9%)

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            +V  WG      LG        VP    AL+ ++ +H+A G  T F+VS DG +++ G G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117

Query: 339  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
             +  LG      G  N   NV TP+    L  V  R V +          H  ALT  GK
Sbjct: 3118 TNGRLGL-----GHSN---NVSTPRANPYLSHVLVRRVAVHSGGK-----HALALTADGK 3164

Query: 399  LYAFGAGDKGQLG 411
            +Y++G G+ G+LG
Sbjct: 3165 VYSWGEGEDGKLG 3177



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            +Q   G   S+A+T  G V+++G     +LGHG      RP  + +L+G R+I  A GA 
Sbjct: 3305 TQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGAL 3364

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
              + ++   QV+A+G +  G+   G   T +   P LV  ++ +
Sbjct: 3365 HCLAVTSENQVWAWGDNDHGQQGNGT--TCVNRRPALVAGVEGV 3406


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 176/375 (46%), Gaps = 36/375 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           + S+GS   GQLG G  EE+     +++L    +    AG+  ++ I + G+++ +G + 
Sbjct: 8   IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK    P  V++L N  +VQAAIG +    +  +GR Y +      + G 
Sbjct: 68  RGTLGHPPE-TKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126

Query: 184 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
             E  D    PL   +         + V Q+AAG  + + L  +     V++     G  
Sbjct: 127 EPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGH---VWT----WGQP 179

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
              G       P  ++  + + L    +A GA+H   + +DG +  WG   YG LG G+ 
Sbjct: 180 WPPGDIKQISTPVRVQGLEKVRL----IAVGAFHNLALLEDGILWAWGNNEYGQLGTGDT 235

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           +  S P  VQ L+D+  + +A G + +  +++DG VY +G GE   LG        G+  
Sbjct: 236 QPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGF-------GDDK 288

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ++ + PQ V  L  V E +VQIS   +     H+ ALT  G++++FG GD G+LG     
Sbjct: 289 SSKMVPQKVQLL--VEENIVQISCGGT-----HSVALTRDGRMFSFGRGDHGRLG---YG 338

Query: 417 NQTERGNPERVDIDL 431
            +   G+P  V I+L
Sbjct: 339 RKVTTGHPMEVPINL 353



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 32/330 (9%)

Query: 27  WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWR 85
           W   ++ L A   C        +AG  +S+A+   G ++++G N  G LGH   T+ E  
Sbjct: 29  WVCAVKALAAQNVC------SVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENI 82

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 137
           P  +++L   +I+QAA G    + + D G+ YA+G + +G+         + G    + +
Sbjct: 83  PSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI 142

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           T PQ   S   + V Q A G   + VL+REG V+T+        G    P D++      
Sbjct: 143 TIPQRCAS--KLSVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISTPV 192

Query: 198 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
            ++ +  V+ IA G  + LAL        +++ G    G+LG G       P  ++    
Sbjct: 193 RVQGLEKVRLIAVGAFHNLALL---EDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD 249

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIH 315
           L L  V +AAG WH+  +  DG V  WG G +G LG G+++    VP+ VQ L +   + 
Sbjct: 250 LTL--VDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ 307

Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           ++ G   +  ++ DG ++SFG G+   LG+
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGY 337



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 48/237 (20%)

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           +A +P   A+ S G G  G+LG G+  +++    ++     N+  VV  AG+ ++  + +
Sbjct: 1   MASKPK--AIISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVV--AGSRNSLAICE 56

Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DG++ TWGW + G LGH  E + E++P  V+AL + K +  A G +    V + G  Y++
Sbjct: 57  DGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAW 116

Query: 336 G------CGE----------------------SASLGHNAIADGQGNRHANVLT------ 361
           G      CGE                      ++ L    +A   G  H+ VLT      
Sbjct: 117 GGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVA--AGGTHSVVLTREGHVW 174

Query: 362 ----PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
               P     +KQ++   RV  +     I   A H  AL E G L+A+G  + GQLG
Sbjct: 175 TWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLG 231


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 35/396 (8%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  I G  H+ A + + + +YS+G    G+LGHG + + + P+PI++LQG+RI Q A G 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG V+++G++  G  + G+  T+    PQ +++ + + V   A G   TA +
Sbjct: 139 SHCLAVTVAGHVHSWGRNQNG--QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 196

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P   + ++    +V +A G+ + + ++   S  
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEK-VSSVNGQKMVLVACGWRHTITVS---SSG 252

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ---------------FQLLNLQPVVVAAGAW 269
           ++Y+ G    G+LGHG   D   P  +E                F  L  +   V  G  
Sbjct: 253 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQ 312

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
            A  +  DG++  WGW ++G +G G+ E    P  V   N+ K + VA G   T  ++E 
Sbjct: 313 WA--LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 370

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            +V+S+G G S  LGH  I D       N+  P+++ +L        Q+  + ++  +A 
Sbjct: 371 KNVFSWGRGTSGQLGHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAVPMSAK 422

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +      + YA    +K   GI    N TE   P+
Sbjct: 423 VW--VSPSERYAIVPDEKAGKGIP-AGNGTETHVPQ 455



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 166/376 (44%), Gaps = 81/376 (21%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S GVV S+G    GQLGHG  E+  RP P                  T+L
Sbjct: 27  AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVP------------------TVL 66

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +           +F +A  GV    +  +                  +  TA    E +
Sbjct: 67  TA-----------AFDDAPGGVASVVICGA------------------DHTTAYSDEELQ 97

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +Y++ WG+  RLGH    +   P P+   L+ + + QIA G  + LA+        V+S 
Sbjct: 98  LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 153

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V +DG +  WGWGRYG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G+ +   +P+ V ++N  K + VA G   T  VS  G +Y++G  +   LGH    
Sbjct: 212 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271

Query: 350 DGQGNRHANVLTPQLVTSLKQVN---ERVVQI----------SLTNSIYWNAHTFALTES 396
           D         L P  + +LK      E  V++           +   I W     AL   
Sbjct: 272 DH--------LVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQW-----ALAAD 318

Query: 397 GKLYAFGAGDKGQLGI 412
           GKLY +G    GQ+G+
Sbjct: 319 GKLYGWGWNKFGQVGV 334


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4012

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      GV GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4013 GA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4070

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L    VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4071 KLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4126

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4127 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4186

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4187 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4238

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    +E G++Y +G  D+GQLG
Sbjct: 4239 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4283



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2949 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3008

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3009 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3067

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3068 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3123

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3124 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3181

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3182 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3240

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3241 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3286

Query: 409  QLG 411
            Q G
Sbjct: 3287 QQG 3289



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 163/330 (49%), Gaps = 18/330 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I + A  +G 
Sbjct: 3990 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4049

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P+++ESL+   VV  A G   +A +
Sbjct: 4050 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4107

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G      L C     
Sbjct: 4108 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4165

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG
Sbjct: 4166 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4223

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P+ VQ L   K I +ATG       SEDG+VY++G  +   LG
Sbjct: 4224 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4283

Query: 345  HNAIADGQGNRHANVLTPQLVTSL--KQVN 372
                 DG  N    +  P+LV +L  K+VN
Sbjct: 4284 -----DGTTN---AIQRPRLVAALQGKKVN 4305



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+G  ++  AAG   +  
Sbjct: 4047 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4106

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++ AG +Y +GK  +G   +     +L   P+LVE+L+   VV  A   G+  T  L+ +
Sbjct: 4107 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4164

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4165 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4220

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4221 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4279 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4318



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2992 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3051

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3052 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3108

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3109 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3167

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3168 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3223

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3224 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3281



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3165

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3166 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3223

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 3224 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 3279

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3306



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3947 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT--- 4002

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4003 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4062

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L   + + VA G   +  V+  GD+Y++G G   
Sbjct: 4063 SWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4122

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   +++
Sbjct: 4123 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVWS 4169

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4170 WGDGDYGKLG 4179



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3201 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3255

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3256 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3313

Query: 155  AIGN 158
            A G+
Sbjct: 3314 ACGS 3317


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 13  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 72

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 73  YSQSGXEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTXEG 130

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 131 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKXVAAGAEHTAAVTEDGD---LYG 186

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G RTD   P  +        +   VA G  H   V   G + T+GW +Y
Sbjct: 187 WGWGRYGNLGLGDRTDRLVPERVTSTG--GEKXSXVACGWRHTISVSYSGALYTYGWSKY 244

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 245 GQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQV----- 299

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 300 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 349

Query: 409 QLGI 412
           QLGI
Sbjct: 350 QLGI 353



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 27/333 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 7   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 64

Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 65  CGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 123

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++   VAAGA H A V
Sbjct: 124 LAVTXEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--XVAAGAEHTAAV 178

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LGH  + D         L P  + +L   N  + QIS         HT ALT
Sbjct: 239 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGGAR-----HTXALT 283

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 284 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 313



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 128/264 (48%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEH 174

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S         A G   T  +S 
Sbjct: 175 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVSY 232

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G  +  AL    S   +
Sbjct: 233 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGARHTXALT---SDGKL 288

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 289 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 345

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 346 GTNGQLGIGESVDRNFPKIIEALS 369



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H+ A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 262 EALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 321

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 322 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 368


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 168/352 (47%), Gaps = 29/352 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VY+ G    GQLG G   +   P  + +L G  I+  AA    T  ++D G+VY  G + 
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARL 181
            G+   GV+G +    P  V +L    V   A G   T  ++  G +   SWG D   +L
Sbjct: 64  AGQ--LGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALA--SWGGDEYGQL 119

Query: 182 GHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           G  +    + V+P  + G+  ++   ++AAG  + LAL        VYS G G  G LGH
Sbjct: 120 GFDSGNIVDGVQPRIVKGS-RDLHFSRVAAGGYHTLALTGSGD---VYSFGDGSSGALGH 175

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G+      P L++   L  L    +A G  H+A +  DG+V TWG G+YG LGHG+ +  
Sbjct: 176 GNLDGCSTPSLVKS--LWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI 233

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            +P  V+AL D   I +A G   T  ++ DG ++S+G G     GH    D        V
Sbjct: 234 KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKED--------V 285

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           L+P+ V  L+     +VQ+S         HT  L + G++Y +G  ++ QLG
Sbjct: 286 LSPKQVHQLE--GRVLVQVSAGAR-----HTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 6/291 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  +T +G VY+ GSN +GQLG    EE+  P  + +L    +   A G   T+ +++ 
Sbjct: 46  HTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTET 105

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G + ++G D +G+  +          P++V+  +++   + A G + T  L+  G VY+F
Sbjct: 106 GALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSF 165

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
             G+   LGH        P  L+ +L  + V QIA G  +  AL        V++ G G 
Sbjct: 166 GDGSSGALGHGNLDGCSTP-SLVKSLWGLGVTQIACGENHSAALTVDGK---VFTWGRGK 221

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LGHGS  + K P  ++   L++   + +A G  H   +  DGR+ +WG G +G  GH
Sbjct: 222 YGQLGHGSTQNIKLPVAVK--ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGH 279

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G +E    PK V  L     + V+ G   T V+ + G+VY +G  E   LG
Sbjct: 280 GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 3/172 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+  AG  H++A+T  G VYSFG  SSG LGHG  +    P  ++SL G+ + Q A G  
Sbjct: 144 SRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGEN 203

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++  G+V+ +G+  +G+  +G   T+ +  P  V++L +  V+Q A G   T  ++
Sbjct: 204 HSAALTVDGKVFTWGRGKYGQLGHG--STQNIKLPVAVKALVDHDVIQIACGGDHTLAIT 261

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            +GR++++  G   + GH T+ + + P  +   LE   +VQ++AG  + + L
Sbjct: 262 SDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH-QLEGRVLVQVSAGARHTVVL 312



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 90/191 (47%), Gaps = 19/191 (9%)

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           G+AVY++G G  G+LG G  +D  HP       L+    V +AA  +H A +  +G V T
Sbjct: 1   GVAVYALGRGDLGQLGIGDYSD--HPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT 58

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            G    G LG    E + VP  V AL+     H+A G   T  V+E G + S+G  E   
Sbjct: 59  TGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118

Query: 343 LGHNA--IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
           LG ++  I DG        + P++V   + ++   V            HT ALT SG +Y
Sbjct: 119 LGFDSGNIVDG--------VQPRIVKGSRDLHFSRVAAG-------GYHTLALTGSGDVY 163

Query: 401 AFGAGDKGQLG 411
           +FG G  G LG
Sbjct: 164 SFGDGSSGALG 174



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 54/91 (59%)

Query: 31  LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           ++  +A +A    +  Q   G  H++A+TS G ++S+G    GQ GHGT E+   P+ + 
Sbjct: 233 IKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH 292

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            L+G  ++Q +AGA  T+++ D G+VY +G 
Sbjct: 293 QLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%)

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G  G LG G+      P  +  L     +H+A  DY T  ++++G+VY+ G  ++  L
Sbjct: 8   GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G   + +         + P  V +L      V  I+         HT A+TE+G L ++G
Sbjct: 68  GVRGMEE--------QVVPIRVAALD--THMVTHIACGFK-----HTVAVTETGALASWG 112

Query: 404 AGDKGQLGIELVN 416
             + GQLG +  N
Sbjct: 113 GDEYGQLGFDSGN 125


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HSI +   G VY+ GSN+ GQLGH    E  +P  I +L    I+  A 
Sbjct: 35  RSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 92

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   ++ +SD GQ++++G  S G+  +       V  P+L++ L    ++Q + GN+   
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS-VAIPRLIKKLNQQMILQVSCGNWHCM 151

Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+ +G+ +T+      +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFPSQASPQR-VKSLEGIPLAQVAAGGAHSFALSL-- 208

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           SG AV+  G    G+LG    TD + P  +   +LL  Q VV ++ G  H AV+ + G V
Sbjct: 209 SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---KLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
            T+G G +G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG 
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 340 SASLG 344
              LG
Sbjct: 325 RGQLG 329



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +VT PQ    + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 22  IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQ--- 78

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ Q     ++S G G  G+LGH +  D    PRLI++ 
Sbjct: 79  IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG  R+G LG G E   ++ P+ V++L  + 
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D Q   H  +L  Q         
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ--------- 243

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 244 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---NPRRV 289



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 92

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS +G+++++  G+D +LGH T  + V    L+  L    ++Q++ G  + +A
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ ++  + + L    VAAG  H+  + 
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 268 GAGSFGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 312

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 313 SSGLIYAFGCGARGQLG 329



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLGH TTE+    PR I+ L    I+Q + G    M 
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++  G+   G +      SPQ V+SL+ I + Q A G   +  LS  G 
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPS-QASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211

Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N  +LG   E +   P H  L  L    VV I+ G  +   L    SG  V++
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 266

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
            G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G 
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 288 YGCLGHG---NEECESVPK 303
            G LG G   N +C S  K
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG     +   P  ++ L+  +++  + G  
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  SFG+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 311

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 312 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           W  G  G +    +   + P+    ++D     VA G   +  + EDG+VY+ G      
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQ 66

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH    + +GN+      P+ + +L   ++ +V ++   S     H+ AL++ G+L+++
Sbjct: 67  LGH----EREGNK------PEQIGAL--ADQHIVHVACGES-----HSLALSDQGQLFSW 109

Query: 403 GAGDKGQLG 411
           GAG  GQLG
Sbjct: 110 GAGSDGQLG 118


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 173/364 (47%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G +I+    GA  T+ 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 82  YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   +P  ++AL++     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358

Query: 409 QLGI 412
           QLGI
Sbjct: 359 QLGI 362



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 27/332 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVTC 74

Query: 157 GNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCL 133

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V 
Sbjct: 134 AVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAVT 188

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y++
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTY 248

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT 
Sbjct: 249 GWSKYGQLGHGDLEDH--------LIPHKLEALS--NSFISQISGG----WR-HTMALTS 293

Query: 396 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 294 DGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q +  + Q VV  +  W H   V +   V  WG 
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +Q + G   T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 174/353 (49%), Gaps = 29/353 (8%)

Query: 65  YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           YSFG NS G+L H  T +   P PI     ++I+  A G  +T  + + G V+  G +  
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73

Query: 125 GEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           G+   G+  T  V S +LV +L  ++I  +++A G      +SR G +YTF + +  +LG
Sbjct: 74  GQC--GIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
           H +  N +     +  L +  VV++A  Y + + +  + +   +Y+ G    G+LG    
Sbjct: 132 HGST-NPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGT---LYAFGRNDLGQLGIDDG 187

Query: 243 TDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECES 300
            D   P  +  F   N +PV+ VA G  H  V   +G V  +G   +G LG G   +  +
Sbjct: 188 MDRHVPVPLTYF---NSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHA 244

Query: 301 VPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            P ++ A L+ +    +A G Y T  ++E G VYSFG  +   LGH       G+RH ++
Sbjct: 245 SPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGH-------GHRH-HL 296

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
             P L+ +L + +     + +T   Y   HT  L+E GK+Y FG  + GQLG+
Sbjct: 297 SEPTLIKALAKTHA----VQVTCGCY---HTLVLSEDGKVYPFGRNNHGQLGL 342



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 10/279 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H  A++  G +Y+FG NS GQLGHG+T     P  I+ L    +++ A     T+++
Sbjct: 106 GCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVM 165

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G +YAFG++  G  + G+        P  +    +  V+  A G   T V    G V
Sbjct: 166 TMEGTLYAFGRNDLG--QLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGV 223

Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
             F   +  +LG  +T      P  L   L+++ V  +A GY + +ALA   S   VYS 
Sbjct: 224 VAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGS---VYSF 280

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LGHG R     P LI+   L     V V  G +H  V+ +DG+V  +G   +G
Sbjct: 281 GRNDYGQLGHGHRHHLSEPTLIK--ALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHG 338

Query: 290 CLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            LG GN  +C S P+++ +L D   + VA+G Y +  ++
Sbjct: 339 QLGLGNLIDCTS-PQIIASLRDKFVVKVASGFYHSICLT 376



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 20/321 (6%)

Query: 62  GVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           G V++ G N SGQ G G+T   +  R  P    + I  I++A G      IS +G +Y F
Sbjct: 63  GDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTF 122

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           G +S G+  +G   T  +T+P  ++ L +  VV+ A   F T V++ EG +Y F   +  
Sbjct: 123 GFNSRGQLGHG--STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLG 180

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LG     +   P PL     + PV+ +A G  + +      +   V + G    G+LG 
Sbjct: 181 QLGIDDGMDRHVPVPL-TYFNSRPVLAVACGQHHTVV---SLTNGGVVAFGKNDHGQLGT 236

Query: 240 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           G   D    P L+    L +L    +A G +H   + + G V ++G   YG LGHG+   
Sbjct: 237 GYTLDYHASPSLLAA-PLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHH 295

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            S P +++AL    A+ V  G Y T V+SEDG VY FG      LG   + D        
Sbjct: 296 LSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLID-------- 347

Query: 359 VLTPQLVTSLKQVNERVVQIS 379
             +PQ++ SL+  ++ VV+++
Sbjct: 348 CTSPQIIASLR--DKFVVKVA 366



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 102/215 (47%), Gaps = 32/215 (14%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+IA+   G VYSFG N  GQLGHG       P  I++L     +Q   G   T+++S+ 
Sbjct: 267 HTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSED 326

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+VY FG+++ G+   G+      TSPQ++ SL++ FVV+ A G + +  L+        
Sbjct: 327 GKVYPFGRNNHGQ--LGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICLTATKN---- 380

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPV----------VQIAAGYCYLLALACQPSG 223
           S G+      HT   D      LG L N P+          VQI A  C ++A  C+P  
Sbjct: 381 SVGSRMDTS-HTLCQD------LGKLVNNPMRSDLVFVLSGVQIHAHSCVVMA-RCEPLE 432

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLL 257
                    LGG++  GS ++   P    E FQ+ 
Sbjct: 433 KM-------LGGRMIEGSLSEINIPDYSPEVFQVF 460



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 19/189 (10%)

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           YS G    G+L H    D   P  I      N++ + VA G    A + + G V T G+ 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCH--NVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 287 RYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G  G G+       ++V AL   D+  I  A G      +S  G +Y+FG      LG
Sbjct: 72  DSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H     G  N    + TP  +  L   +  VV+++ +   Y+  HT  +T  G LYAFG 
Sbjct: 132 H-----GSTNP---ITTPTKIKDLASYH--VVEVACS---YF--HTIVMTMEGTLYAFGR 176

Query: 405 GDKGQLGIE 413
            D GQLGI+
Sbjct: 177 NDLGQLGID 185



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           +A  +    Q   G  H++ ++  G VY FG N+ GQLG G   +   P+ I SL+   +
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFV 362

Query: 98  IQAAAGAGRTMLIS 111
           ++ A+G   ++ ++
Sbjct: 363 VKVASGFYHSICLT 376


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 173/366 (47%), Gaps = 40/366 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AV   G V+++G N  GQLG GT  +   P  +  L G+  I  A G   T  
Sbjct: 264 AGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI--AEGRRHTFA 321

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + +G+   G +  +L  +P  V  L ++  +  A G++ T  + ++G 
Sbjct: 322 VRQDGTVWAWGLNFWGQLGDGTRSDRL--TPVQVPDLTSVTAI--AAGDYHTLAVRQDGT 377

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T  + + P  + G      V  IAAG  + +A+    +   V+
Sbjct: 378 VW--AWGDNVWGQLGDGTYTDRLTPVQVPGLTG---VTAIAAGESHTVAMRQDGT---VW 429

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G  + G+LG G+ TD   P      Q+ +L  V  +AAG +H   V QDG VC WG+ 
Sbjct: 430 AWGDNVWGQLGDGTYTDRLTP-----VQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            YG LG G       P +V  L  V     +A GD  T  V +DG V+++G   S  LG 
Sbjct: 485 AYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGD 544

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            A  D    R   V  P L               +T     +AHT A  + G ++++GA 
Sbjct: 545 GATID----RRIPVQIPGLA-------------GVTAIAAGSAHTLAAGQDGAVWSWGAN 587

Query: 406 DKGQLG 411
             GQLG
Sbjct: 588 SYGQLG 593



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 174/381 (45%), Gaps = 44/381 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+ AV+  G V+++G N  GQLG GT  +   P  +  L G+  I  AAG   T  
Sbjct: 114 AGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAI--AAGRRHTFA 171

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +++G+   G +  +L  +P  V  L  +  +  A G++ T  + ++G 
Sbjct: 172 VRQDGTVWAWGDNAWGQLGDGTRTNRL--TPVQVPGLTGVTAI--AAGDYHTLAVRQDGT 227

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WGN+A  +LG  T    + P  + G      V  I+AG  + +A+    +   V+
Sbjct: 228 VW--AWGNNALGQLGDGTYTERLTPVQVPGLTG---VTAISAGESHTVAVRQDGT---VW 279

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G  + G+LG G+RTD   P      Q+  L  V  +A G  H   V QDG V  WG  
Sbjct: 280 AWGDNVWGQLGDGTRTDRLTP-----VQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLN 334

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            +G LG G       P  V  L  V AI  A GDY T  V +DG V+++G      LG  
Sbjct: 335 FWGQLGDGTRSDRLTPVQVPDLTSVTAI--AAGDYHTLAVRQDGTVWAWGDNVWGQLGDG 392

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
              D         LTP  V  L  V       S         HT A+ + G ++A+G   
Sbjct: 393 TYTD--------RLTPVQVPGLTGVTAIAAGES---------HTVAMRQDGTVWAWGDNV 435

Query: 407 KGQLGIELVNNQTERGNPERV 427
            GQLG       T+R  P +V
Sbjct: 436 WGQLGD---GTYTDRLTPVQV 453



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 54/387 (13%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AV   G V+++G N+SGQLG G T +   P  I  L G+  I  AAG+  T+ 
Sbjct: 517 AGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAGVTAI--AAGSAHTLA 574

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
               G V+++G +S+G+   G    +L  SP  V  L  +  +  A G+  +  L ++G 
Sbjct: 575 AGQDGAVWSWGANSYGQLGDGTTTHRL--SPVQVPGLTGVSAM--AAGDAHSVALLQDGT 630

Query: 170 VYTF---SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           V  +   SWG   +LG  T    + P   H L G      V  +AAG  + +AL    + 
Sbjct: 631 VSAWGRNSWG---QLGDGTTAARLTPVQVHGLTG------VTAVAAGSLHTVALRQDGT- 680

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
             V++ G    G+LG G+ T     R +   Q+  L  V  +AAG +H   V QDG V  
Sbjct: 681 --VWAWGYNDLGQLGDGTTT-----RRLAPVQVQGLTDVTAIAAGYFHTVAVRQDGTVWA 733

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG+  +G LG G+    S P  VQ L  V A+  A G   T  V +DG V+++G      
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQELTGVSAL--AAGYAHTVAVKQDGTVWAWGNNSGTQ 791

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+ +  D    R+    TP  V  L  V+      +LT   +   HT A++  G  +A+
Sbjct: 792 LGNGSSTD----RY----TPVWVEGLTGVS------ALTAGRF---HTAAVSPEGFGWAW 834

Query: 403 GAGDKGQLGIELVNNQTERGNPERVDI 429
           G  + GQ+G     + T    P  VD+
Sbjct: 835 GRNNFGQVG-----DGTTADRPRPVDV 856



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 162/365 (44%), Gaps = 41/365 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AV   G  +++G+N+ GQLG GT  +   P  +  L G+  +  AAG   T  
Sbjct: 14  AGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTAV--AAGRHHTFA 71

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + +G+   G    +   +P  V  L  +  +  A G   T  +S++G 
Sbjct: 72  VRQDGTVWAWGLNVWGQLGDGTHTERH--TPVQVPGLTGVTAI--AAGRRHTFAVSQDGT 127

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T  +   P  L    E   V  IAAG  +  A+    +   V+
Sbjct: 128 VW--AWGDNDWGQLGDGTRADRHTPVQL---PELTGVTAIAAGRRHTFAVRQDGT---VW 179

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG G+RT+   P      Q+  L  V  +AAG +H   V QDG V  WG  
Sbjct: 180 AWGDNAWGQLGDGTRTNRLTP-----VQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNN 234

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LG G       P  V  L  V AI  + G+  T  V +DG V+++G      LG  
Sbjct: 235 ALGQLGDGTYTERLTPVQVPGLTGVTAI--SAGESHTVAVRQDGTVWAWGDNVWGQLGDG 292

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
              D         LTP  V  L  V                 HTFA+ + G ++A+G   
Sbjct: 293 TRTD--------RLTPVQVPGLSGVTAIAEG---------RRHTFAVRQDGTVWAWGLNF 335

Query: 407 KGQLG 411
            GQLG
Sbjct: 336 WGQLG 340



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   AG  HS+A+   G V ++G NS GQLG GTT     P  +  L G+  +  AAG+ 
Sbjct: 613 SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAV--AAGSL 670

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ +   G V+A+G +  G+   G    +L  +P  V+ L ++  +  A G F T  + 
Sbjct: 671 HTVALRQDGTVWAWGYNDLGQLGDGTTTRRL--APVQVQGLTDVTAI--AAGYFHTVAVR 726

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           ++G V+ + +    +LG  +      P   +   E   V  +AAGY + +A+    +   
Sbjct: 727 QDGTVWAWGYNLWGQLGDGSSTARSTP---VQVQELTGVSALAAGYAHTVAVKQDGT--- 780

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G   G +LG+GS TD   P  +E    ++     + AG +H A V  +G    WG 
Sbjct: 781 VWAWGNNSGTQLGNGSSTDRYTPVWVEGLTGVS----ALTAGRFHTAAVSPEGFGWAWGR 836

Query: 286 GRYGCLGHGNEECESVP 302
             +G +G G       P
Sbjct: 837 NNFGQVGDGTTADRPRP 853


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 180/379 (47%), Gaps = 39/379 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG--- 120
           + ++GS   GQLG G+ EE+     +++LQ  RI    AG+  ++ I+D G+++ +G   
Sbjct: 7   IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           + + G         K   +P  V++L ++ +VQAAIG +    +  +GR Y +      +
Sbjct: 67  RATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 126

Query: 181 LGHHTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            G   E  D    PL   +E IP        V Q+AAG  + + L  +     V++    
Sbjct: 127 CGEEPERKDGTGRPLRRDIE-IPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT---- 178

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
            G     G       P  ++  + + L    +A GA+H   + +DG +  WG   YG LG
Sbjct: 179 WGQPWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLG 234

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G+ +  S P  VQ L+D+  + +A G + +  ++++G+VY +G GE   LG      G 
Sbjct: 235 TGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF-----GD 289

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            ++ +  + PQ V  L    E +VQ+S   +     H+ ALT  G +++FG GD G+LG 
Sbjct: 290 SDKSSK-MVPQKVQLL--AGEDIVQVSCGGT-----HSVALTRDGHMFSFGRGDHGRLGY 341

Query: 413 ELVNNQTERGNPERVDIDL 431
                +   G P  V IDL
Sbjct: 342 ---GRKVTTGQPMEVPIDL 357



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 37/316 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-----GTTEEEWRPRPIRSLQGIRIIQAAAG 103
           +AG  +S+A+   G ++++G N    LGH        + E  P  +++L  ++I+QAA G
Sbjct: 44  VAGSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIG 103

Query: 104 AGRTMLISDAGQVYAFGKDSFG---EAEYGVQGT-----KLVTSPQLVESLKNIFVVQAA 155
               + + D G+ YA+G + +G   E      GT     + +  PQ       + V Q A
Sbjct: 104 GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQ--RCAPKLVVRQVA 161

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
            G   + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A  
Sbjct: 162 AGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA-- 210

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
                LA Q  G  +++ G    G+LG G       P  ++    L L  V +AAG WH+
Sbjct: 211 --FHNLALQEDG-TLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTL--VDIAAGGWHS 265

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 329
             +  +G V  WG G +G LG G+ +  S  VP+ VQ L     + V+ G   +  ++ D
Sbjct: 266 TALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRD 325

Query: 330 GDVYSFGCGESASLGH 345
           G ++SFG G+   LG+
Sbjct: 326 GHMFSFGRGDHGRLGY 341



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+   G ++++G+N  GQLG G T+   +P  ++ L  + ++  AA
Sbjct: 201 ENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAA 260

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  ++D G+VY +G+   G   +G         PQ V+ L    +VQ + G   + 
Sbjct: 261 GGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSV 320

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+G +++F  G+  RLG+
Sbjct: 321 ALTRDGHMFSFGRGDHGRLGY 341



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 26/270 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 98
           QA  G  H +AV  +G  Y++G N  GQ G     ++   RP+R            + + 
Sbjct: 99  QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVR 158

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q AAG   +++++  G V+ +G+       +     K ++ P  V+ L+N+ ++  A+G 
Sbjct: 159 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGA 210

Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           F    L  +G ++  +WGN+   +LG        +P  + G L ++ +V IAAG  +  A
Sbjct: 211 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPIRVQG-LSDLTLVDIAAGGWHSTA 267

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L  +     VY  G G  G+LG G  +D+    + ++ QLL  + +V V+ G  H+  + 
Sbjct: 268 LTDEGE---VYGWGRGEHGRLGFGD-SDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALT 323

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
           +DG + ++G G +G LG+G +     P  V
Sbjct: 324 RDGHMFSFGRGDHGRLGYGRKVTTGQPMEV 353


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 175/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    +L  +R +Q   G    + ++  G+VYA   
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA--T 4025

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
                    G+ GT  + +P L+ES+++IF+ + A+  G      LS +G+VY++  G+D 
Sbjct: 4026 GYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDG 4085

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH  + N  +   L+  L+   +V IA G  +  A+    +G  +Y+ G G  G+LGH
Sbjct: 4086 KLGHGNK-NGCDHPQLIDALQGKEIVDIACGGAHSAAVT---AGGEIYTWGKGRYGRLGH 4141

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E      +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4142 GDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4201

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             +P  +++L  +  + V  G   +  ++  G VY++G G+   LGH +    +  RH   
Sbjct: 4202 KIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGS---DEHVRH--- 4255

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ + +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4256 --PKKIAALQ--GKKIICIA-TGSL----HCVACSDLGEVFTWGDNDEGQLG 4298



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 168/345 (48%), Gaps = 16/345 (4%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G    +AVTS G VY+ G  + G+LG G T+    P  + S+Q I I + A  +G 
Sbjct: 4005 QLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGG 4064

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       PQL+++L+   +V  A G   +A +
Sbjct: 4065 KHCLALSTDGKVYSWGEGDDGKLGHGNKNG--CDHPQLIDALQGKEIVDIACGGAHSAAV 4122

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+ TL    V+ IA G      L C     
Sbjct: 4123 TAGGEIYTWGKGRYGRLGHGDSEDQMKPK-LVETLIGFKVIDIACGSGDAQTL-CITDDD 4180

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L  L  V V  G+  +  + + G V TWG
Sbjct: 4181 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVVKVECGSQFSVALTRSGSVYTWG 4238

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG++E    PK + AL   K I +ATG       S+ G+V+++G  +   LG
Sbjct: 4239 KGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG 4298

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
                 DG  N    +  P+LV +L+  N   V     +S+ W+ +
Sbjct: 4299 -----DGTMNA---IHRPRLVVTLQGKNINRVACGSAHSLAWSTN 4335



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 20/353 (5%)

Query: 49   IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
            IAG   S+ + S  G +Y+ G  ++G+LG G +     P  + SL    I+ +   +G  
Sbjct: 3023 IAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGK 3082

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              M ++  G+V+++G+   G+   G      +  P+++E+LK+  +   A G+  +A +S
Sbjct: 3083 HAMALTLDGKVFSWGEGEDGK--LGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAIS 3140

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G ++T+  G   RLGH      + P  L+  L    +VQ+A G      LA    G+ 
Sbjct: 3141 STGELFTWGLGEYGRLGHGDNLTQLRPK-LVKALLGHHIVQVACGSRDAQTLALSAEGL- 3198

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   L +   ++  GA  +  + + G+V TWG 
Sbjct: 3199 VFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGV--CMIECGAQFSLALTKFGQVYTWGK 3256

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG+++    P +V++L++ K +HVA G       ++ G VY++G  +    G+
Sbjct: 3257 GDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW---NAHTFALTE 395
              I     NR      P LV +L+ V    V    ++SI W   + H   +TE
Sbjct: 3317 GTIL---VNRK-----PSLVLNLEGVRVNRVACGSSHSIAWTTSDTHAPNMTE 3361



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A++  G VYS+G+   G+LGHG      +P  I  L G  +I  + GA  +  ++ +
Sbjct: 532 HSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSS 591

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+VY +G+ ++G   +G       T P LV  LK+ F+V  A G+     L+       F
Sbjct: 592 GEVYTWGRGNYGRLGHGTSEDH--TVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVF 649

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAVYSVGCG 232
           SWG+       T  +D    P L  +E +  +++A  YC    +LA   SG +VY+ G G
Sbjct: 650 SWGDGGYGKLGTGGSDGSKTPKL--IEKLQDIEVARVYCGSQFSLALTKSG-SVYTWGKG 706

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              +LGHGS    + P+L+E      ++ V V +G  H   +  DG V  WG    G +G
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRNDNGQVG 764

Query: 293 HGNEECESVPKVVQALNDVKAIHVATG 319
             +E   S P ++  L     + +  G
Sbjct: 765 ETSETNVSEPTLLTLLQGKNIVDIDCG 791



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 170/352 (48%), Gaps = 27/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N   QLG     +   P    SL  ++ I  A G+    ++S  G++YA G+ +
Sbjct: 2987 VFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGT 3046

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+  +  V +P  + SL    + + A+  G      L+ +G+V+++  G D +L
Sbjct: 3047 NGR--LGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3104

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    +   P  ++  L++  +  IA G  +  A++   S   +++ G G  G+LGHG 
Sbjct: 3105 GHDNRLSLDRPK-MIEALKSKRIRDIACGSSHSAAIS---STGELFTWGLGEYGRLGHGD 3160

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
               +  P+L++   LL    V VA G+  A  +    +G V +WG G +G LG G  E  
Sbjct: 3161 NLTQLRPKLVK--ALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGC 3218

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             +P  ++ LN +    +  G   +  +++ G VY++G G+   LGH +      ++H  V
Sbjct: 3219 DIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGS------DQH--V 3270

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P LV SL +  +++V +++        H    T+ G++YA+G  D GQ G
Sbjct: 3271 RKPTLVESLSE--KKIVHVAVG-----ALHCLCATDQGQVYAWGDNDHGQQG 3315



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 31/276 (11%)

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           TSPQ  +S++ + V Q      +  +L+  G+VY   + ++ +     E  D        
Sbjct: 466 TSPQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQCPEQIEGFDG------- 518

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
             + I  +   A   + LAL+C      VYS G G GG+LGHG       P  I   +L+
Sbjct: 519 --KEISKLAAHADGKHSLALSCDGD---VYSWGNGDGGRLGHGDNNSRDQPTKIT--ELV 571

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
               + ++ GA ++A V   G V TWG G YG LGHG  E  +VP +V  L D   + +A
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIA 631

Query: 318 --TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
             +GD  T  V+  G V+S+G            +DG         TP+L+       E++
Sbjct: 632 CGSGDAQTLAVTNTGLVFSWG-DGGYGKLGTGGSDGSK-------TPKLI-------EKL 676

Query: 376 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             I +      +  + ALT+SG +Y +G GD  +LG
Sbjct: 677 QDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG 712



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 10/208 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S AVTS G VY++G  + G+LGHGT+E+   P  +  L+   I+  A G+G  +T+
Sbjct: 581 GATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTL 640

Query: 109 LISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +++ G V+++G   +G+   G   G+K   +P+L+E L++I V +   G+ F+  L++ 
Sbjct: 641 AVTNTGLVFSWGDGGYGKLGTGGSDGSK---TPKLIEKLQDIEVARVYCGSQFSLALTKS 697

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VYT+  G++ RLGH +E N V    L+  L    + ++A G  ++LAL        VY
Sbjct: 698 GSVYTWGKGDNHRLGHGSE-NHVRFPKLVEGLNGKCIKKVAVGSGHVLALT---DDGEVY 753

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G++G  S T+   P L+   Q
Sbjct: 754 GWGRNDNGQVGETSETNVSEPTLLTLLQ 781



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 22/204 (10%)

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            +Y+ G G  G+LG G   +   P  +       ++ V V +G  HA  +  DG+V +WG 
Sbjct: 3039 LYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGE 3098

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G  G LGH N      PK+++AL   +   +A G   +  +S  G+++++G GE   LGH
Sbjct: 3099 GEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                      +   L P+LV +L  +   +VQ++  +    +A T AL+  G ++++G G
Sbjct: 3159 --------GDNLTQLRPKLVKAL--LGHHIVQVACGSR---DAQTLALSAEGLVFSWGDG 3205

Query: 406  DKGQLGIELVNNQTERGNPERVDI 429
            D G+LG         RG  E  DI
Sbjct: 3206 DFGKLG---------RGGSEGCDI 3220



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 33/328 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+   S++ + + Q        ++++  G+VY     S  +             P+ +E 
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQC------------PEQIEG 515

Query: 146 L--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
              K I  + A      +  LS +G VY++  G+  RLGH    +  +P  +   L    
Sbjct: 516 FDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKI-TELVGKN 574

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V+ I+ G  Y  A+    S   VY+ G G  G+LGHG+  D   P L+   +   +  + 
Sbjct: 575 VIHISCGATYSAAVT---SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIA 631

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
             +G      V   G V +WG G YG LG G  +    PK+++ L D++   V  G   +
Sbjct: 632 CGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFS 691

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +++ G VY++G G++  LGH +          +V  P+LV  L     + V +     
Sbjct: 692 LALTKSGSVYTWGKGDNHRLGHGS--------ENHVRFPKLVEGLNGKCIKKVAVG---- 739

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
              + H  ALT+ G++Y +G  D GQ+G
Sbjct: 740 ---SGHVLALTDDGEVYGWGRNDNGQVG 764



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 26/258 (10%)

Query: 164  LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            L+R+   +T +WG    +   GH+        E   V+       L  +  VQ+  G   
Sbjct: 3953 LNRKPEDWTLTWGGSGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQT 4012

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            LLA+    S   VY+ G G GG+LG G       P L+E  Q + ++ V V +G  H   
Sbjct: 4013 LLAVT---SDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLA 4069

Query: 274  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
            +  DG+V +WG G  G LGHGN+     P+++ AL   + + +A G   +  V+  G++Y
Sbjct: 4070 LSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIY 4129

Query: 334  SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            ++G G    LGH    D         + P+LV +L  +  +V+ I+  +    +A T  +
Sbjct: 4130 TWGKGRYGRLGHGDSEDQ--------MKPKLVETL--IGFKVIDIACGSG---DAQTLCI 4176

Query: 394  TESGKLYAFGAGDKGQLG 411
            T+   ++++G GD G+LG
Sbjct: 4177 TDDDNVWSWGDGDYGKLG 4194



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 3/161 (1%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT+ G+V+S+G    G+LG G ++    P+ I  LQ I + +   G+  ++ 
Sbjct: 634 SGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLA 693

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++ +G VY +GK       +G +    V  P+LVE L    + + A+G+     L+ +G 
Sbjct: 694 LTKSGSVYTWGKGDNHRLGHGSENH--VRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGE 751

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           VY +   ++ ++G  +E N  EP  LL  L+   +V I  G
Sbjct: 752 VYGWGRNDNGQVGETSETNVSEP-TLLTLLQGKNIVDIDCG 791



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 13/133 (9%)

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            +V  WG      LG        VP   ++L  +K IH+A G  + F+VS DG +Y+ G G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEG 3045

Query: 339  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
             +  LG      G  N   NV TP  +TSL   N+ V++    +S     H  ALT  GK
Sbjct: 3046 TNGRLGL-----GHSN---NVATPCQLTSL---NQYVIKKVAVHS--GGKHAMALTLDGK 3092

Query: 399  LYAFGAGDKGQLG 411
            ++++G G+ G+LG
Sbjct: 3093 VFSWGEGEDGKLG 3105



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E ++   G   S+A+T  G VY++G   + +LGHG+      P+ +  L G  I + A G
Sbjct: 680 EVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVG 739

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +G  + ++D G+VY +G++  G+   G      V+ P L+  L+   +V    G
Sbjct: 740 SGHVLALTDDGEVYGWGRNDNGQV--GETSETNVSEPTLLTLLQGKNIVDIDCG 791



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            E+   ++      G  H +  T +G VY++G N  GQ G+GT     +P  + +L+G+R+
Sbjct: 3277 ESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRV 3336

Query: 98   IQAAAGAGRTM 108
             + A G+  ++
Sbjct: 3337 NRVACGSSHSI 3347



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
            G GH +A+T  G VY +G N +GQ+G  +      P  +  LQG  I+    G  +++
Sbjct: 738 VGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSI 796


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 186/388 (47%), Gaps = 44/388 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQGIRIIQAAAGAGR 106
           +G  H+I V+  G VYS+G    GQL  G  E+     +P  I++L   R+++ A G   
Sbjct: 41  SGEAHNICVSRFGDVYSWGRGKEGQL--GVPEKMLFSTKPNLIKTLLHERVVKVACGNFH 98

Query: 107 TMLISDAGQVYAFGK-DSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           ++ ++D G+VY +G+     +++ G++ T  L+  P + +        Q+ I N  +  L
Sbjct: 99  SLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKP-----KYQSIIENSVSQYL 153

Query: 165 SREGRVYTFSWGND--------------ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           + E  +Y  + GN+                +G   + N   P  + G L N  V+ I+AG
Sbjct: 154 NGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAG 213

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           + +  + A   SG  +++ G    G+LG   R     P+L++   LL+++ V V+ G  H
Sbjct: 214 WAF--SAAVTKSG-KIFTWGFNEKGQLGLKHRWFNSSPQLVK--TLLDVKIVSVSCGRQH 268

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSE 328
              V +DG + TWG G +G LGH N +    PK V A  LN ++   V+ G   T V+  
Sbjct: 269 IGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGR 328

Query: 329 DGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           +  +Y+FG GE A LG       +  G  + H    +P++V +L+    + V        
Sbjct: 329 NQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCG----- 383

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGI 412
             + HT ALTE  ++Y +G G  G LG+
Sbjct: 384 --HLHTLALTEDNEVYVWGWGSSGCLGL 409



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 44/367 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V S G+N +GQLG    +E   P+ + SL+G  I+  ++G    + +S  G VY++G+  
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62

Query: 124 FGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-----N 177
             E + GV    L  T P L+++L +  VV+ A GNF +  L+ +GRVY   WG     +
Sbjct: 63  --EGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVY--EWGQLHKID 118

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
           D++ G     N +   P +   +   +++ +    YL           +Y    G     
Sbjct: 119 DSKTGLEA-TNGLLEMPGMSKPKYQSIIENSVSQ-YL------NGEKEIYDSTSGNNDDD 170

Query: 238 GHGSRTDE---KHP-RLIEQFQ---------LLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
              S +++   KH  ++I+  Q         L N + + ++AG   +A V + G++ TWG
Sbjct: 171 DEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWG 230

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           +   G LG  +    S P++V+ L DVK + V+ G      V+EDGD+Y++G G    LG
Sbjct: 231 FNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLG 290

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           H+ +         + L P+ V +      +V Q+S  ++      T  L  +  LYAFG 
Sbjct: 291 HSNV--------KSYLHPKKVAAFSLNGIQVSQVSCGSNF-----TMVLGRNQILYAFGH 337

Query: 405 GDKGQLG 411
           G+  QLG
Sbjct: 338 GEYAQLG 344



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 160/344 (46%), Gaps = 40/344 (11%)

Query: 51  GPGHSIAVTSKGVVYSFG-------SNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAA 102
           G  HS+A+T +G VY +G       S +  +  +G  E     +P  +S+    + Q   
Sbjct: 95  GNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLN 154

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV----TSPQLVESL-KNIFVVQAAIG 157
           G  + +  S +G      + S  E   G    K++    T+P  V+ L  N  V+  + G
Sbjct: 155 GE-KEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAG 213

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
             F+A +++ G+++T+ +    +LG      +  P  L+ TL ++ +V ++ G  ++ A+
Sbjct: 214 WAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ-LVKTLLDVKIVSVSCGRQHIGAV 272

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                   +Y+ G G+ G+LGH +     HP+ +  F L  +Q   V+ G+    V+G++
Sbjct: 273 T---EDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRN 329

Query: 278 GRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDVKAIHVATGDYTTF 324
             +  +G G Y  LG   EE +             S PKVV+AL D K  +V  G   T 
Sbjct: 330 QILYAFGHGEYAQLG-ATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTL 388

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            ++ED +VY +G G S  LG N+       R    L PQLVTS+
Sbjct: 389 ALTEDNEVYVWGWGSSGCLGLNS------KRFQ--LVPQLVTSI 424



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 26/266 (9%)

Query: 88  PIRSLQGI----RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
           PI+ +QG+     +I  +AG   +  ++ +G+++ +G +  G+   G++     +SPQLV
Sbjct: 195 PIQ-VQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQL--GLKHRWFNSSPQLV 251

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENI 202
           ++L ++ +V  + G      ++ +G +YT+  G   +LGH    + + P  +   +L  I
Sbjct: 252 KTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGI 311

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---------HGSRTDE---KHPRL 250
            V Q++ G  + + L        +Y+ G G   +LG          GSR +      P++
Sbjct: 312 QVSQVSCGSNFTMVLG---RNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKV 368

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           +E  +   ++   V  G  H   + +D  V  WGWG  GCLG  ++  + VP++V +++ 
Sbjct: 369 VEALEDKKIK--YVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISG 426

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFG 336
            +   ++ G+  + +V    D+ SF 
Sbjct: 427 EEISCISAGEKHSLIV-RGSDLTSFA 451



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV--AAGAWHAAVVGQDGRVC 281
           M+V SVG    G+LG  +  +   P+++E  +      V+V  ++G  H   V + G V 
Sbjct: 1   MSVISVGNNKNGQLGIENIKEHLEPKVLESLK----GKVIVSCSSGEAHNICVSRFGDVY 56

Query: 282 TWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           +WG G+ G LG   +   S  P +++ L   + + VA G++ +  +++ G VY +G
Sbjct: 57  SWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWG 112



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 17/140 (12%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V + G  + G LG  N +    PKV+++L     +  ++G+     VS  GDVYS+G G+
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              L       G   +      P L+ +L  ++ERVV+++       N H+ ALT+ G++
Sbjct: 63  EGQL-------GVPEKMLFSTKPNLIKTL--LHERVVKVACG-----NFHSLALTDQGRV 108

Query: 400 YAFG---AGDKGQLGIELVN 416
           Y +G     D  + G+E  N
Sbjct: 109 YEWGQLHKIDDSKTGLEATN 128



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 26/251 (10%)

Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           S GN+   +LG       +EP  +L +L+   +V  ++G  + +   C      VYS G 
Sbjct: 5   SVGNNKNGQLGIENIKEHLEP-KVLESLKGKVIVSCSSGEAHNI---CVSRFGDVYSWGR 60

Query: 232 GLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
           G  G+LG   +      P LI+   LL+ + V VA G +H+  +   GRV  + WG+   
Sbjct: 61  GKEGQLGVPEKMLFSTKPNLIKT--LLHERVVKVACGNFHSLALTDQGRV--YEWGQLHK 116

Query: 291 LGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           +       E+   +++   ++  K   +     + ++  E  ++Y    G +      + 
Sbjct: 117 IDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEK-EIYDSTSGNNDDDDEAST 175

Query: 349 ADGQGNRHA------NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           ++    +H       N  TP  V  L   NE V+ IS      W A + A+T+SGK++ +
Sbjct: 176 SEQSKGKHIGKIIDYNQTTPIQVQGL-LANEEVIDISAG----W-AFSAAVTKSGKIFTW 229

Query: 403 GAGDKGQLGIE 413
           G  +KGQLG++
Sbjct: 230 GFNEKGQLGLK 240


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 160/325 (49%), Gaps = 29/325 (8%)

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           P+R     R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L 
Sbjct: 6   PVR-----RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALD 58

Query: 148 NIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
              +V    G +  TA       VY++ WG+  RLGH    + + P P+   L  + + Q
Sbjct: 59  GHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIK-ALHGLKIRQ 117

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           IA G  + LA+  +     V S G    G+LG G+  D   P+ I+ F+ ++++  +VAA
Sbjct: 118 IACGDSHCLAVTMEGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIK--MVAA 172

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           GA H A V +DG +  WGWGRYG LG G+     VP+ V +++  K + VA G   T  V
Sbjct: 173 GAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV 232

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G +Y++G  +   LGH    D         L P  + +L+  N  + QIS      W
Sbjct: 233 SSLGGLYTYGWSKYGQLGHGDFED--------RLVPHRLEALRGDN--ISQISGG----W 278

Query: 387 NAHTFALTESGKLYAFGAGDKGQLG 411
             HT ALT  GKLY +G    GQ+G
Sbjct: 279 R-HTMALTTDGKLYGWGWNKFGQVG 302



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 172/363 (47%), Gaps = 24/363 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L G  I+    GA  T  
Sbjct: 15  AGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTA 74

Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S A  +VY++G   FG   +G   + L+T P+ +++L  + + Q A G+     ++ EG
Sbjct: 75  YSVARTEVYSWGWGDFGRLGHG-NSSDLLT-PKPIKALHGLKIRQIACGDSHCLAVTMEG 132

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    E I +  +AAG  +  A+        ++ 
Sbjct: 133 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFEGISIKMVAAGAEHTAAVT---EDGELFG 188

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P+ +       +  V+VA G  H   V   G + T+GW +Y
Sbjct: 189 WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 246

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP  ++AL       ++ G   T  ++ DG +Y +G  +   +G    
Sbjct: 247 GQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDN 306

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D     H + +  +        +++V+QIS      W  HT A+T+   ++++G G  G
Sbjct: 307 ID-----HCSPIQIKFPQ-----DQKVIQISCG----WR-HTLAVTDKQNVFSWGRGTNG 351

Query: 409 QLG 411
           QLG
Sbjct: 352 QLG 354



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 159/327 (48%), Gaps = 22/327 (6%)

Query: 37  GEACCRRENSQAIAGPGHSIAVTSKGV------------VYSFGSNSSGQLGHGTTEEEW 84
           G+A  R   +Q  A  GH I   + G             VYS+G    G+LGHG + +  
Sbjct: 43  GDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLL 102

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+PI++L G++I Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 160

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           + + I +   A G   TA ++ +G ++ + WG    LG     + + P   + +++   +
Sbjct: 161 AFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQK-VSSVDGDKM 219

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V +A G+ + ++++   S   +Y+ G    G+LGHG   D   P  +E  +  N+  +  
Sbjct: 220 VMVACGWRHTISVS---SLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQI-- 274

Query: 265 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            +G W H   +  DG++  WGW ++G +G G+      P  ++   D K I ++ G   T
Sbjct: 275 -SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHT 333

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
             V++  +V+S+G G +  LGH    D
Sbjct: 334 LAVTDKQNVFSWGRGTNGQLGHGESVD 360



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG GTTE+   P+ I++ +GI I   AAGA  
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEH 176

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G+++ +G   +G    G +  +LV  PQ V S+    +V  A G   T  +S 
Sbjct: 177 TAAVTEDGELFGWGWGRYGNLGLGDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSS 234

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L    + QI+ G+ + +AL        +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGK---L 290

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +    Q V+  +  W H   V     V +WG 
Sbjct: 291 YGWGWNKFGQVGAGDNIDHCSPI---QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGR 347

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG     + P +++AL+
Sbjct: 348 GTNGQLGHGESVDRNTPMILEALS 371



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 26/226 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V+ I+AG  + +AL    SG  V S G G  G+LGHG   D   P    Q   L+   +V
Sbjct: 10  VLFISAGASHSVALL---SGNIVCSWGRGEDGQLGHGDAEDRLSP---TQLSALDGHEIV 63

Query: 264 -VAAGAWHAAVVG-QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            V  GA H          V +WGWG +G LGHGN      PK ++AL+ +K   +A GD 
Sbjct: 64  SVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDS 123

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
               V+ +G+V S+G  ++  LG     D         L PQ + + + ++ ++V     
Sbjct: 124 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDS--------LVPQKIQAFEGISIKMVAAGA- 174

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                  HT A+TE G+L+ +G G  G LG+    ++ +R  P++V
Sbjct: 175 ------EHTAAVTEDGELFGWGWGRYGNLGL---GDRNDRLVPQKV 211


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 177/356 (49%), Gaps = 29/356 (8%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    +L  +R IQ A G      I+  G+VYA G 
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGY 3673

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ G + VT P L+ESL+++FV + A+  G      LS EG VY++  G D 
Sbjct: 3674 GA--GGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDG 3731

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH  +     P  ++ +L    VV +A G  +  A+        +Y+ G G  G+LGH
Sbjct: 3732 KLGHGNKLPCDRPR-IIESLRGKDVVDVACGGAHSAAITALGE---LYTWGKGRYGRLGH 3787

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA---AVVGQDG-RVCTWGWGRYGCLGHGN 295
            G   D+  P+L+E   LL  + + VA G+  A   A+  ++G  V +WG G YG LG G 
Sbjct: 3788 GDSDDQLKPKLVEA--LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGG 3845

Query: 296  EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
             +   +P  +++L+ +  I V  G   +  +S +G VY++G G+   LGH    D    R
Sbjct: 3846 SDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGV--DEHVRR 3903

Query: 356  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               V+T Q         ++V+ IS T ++    H    T+ G++Y +G  D+GQLG
Sbjct: 3904 PKKVMTLQ--------GKKVISIS-TGAL----HCVVCTDQGEVYTWGDNDEGQLG 3946



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 183/372 (49%), Gaps = 29/372 (7%)

Query: 44   ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
            ++ Q++  P  S++   +  VY +G N   QLG     +   P+ +     ++ I  A G
Sbjct: 2682 KSQQSVIQPISSVSGAKR--VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGG 2739

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFT 161
            +    L++ +G+ YA G+ S G    G+  ++ V SP  + +L    V + A+  G    
Sbjct: 2740 SKSLFLVTQSGKAYACGEGSNGR--LGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHA 2797

Query: 162  AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
              L+ +GRV+++  G+D +LGH  +   ++    +  L    V  +AAG  +  A+    
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGH-GDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVT--- 2853

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGR 279
            S   +Y+ G G  G+LGHG    +  P+ +E   L+  + V V+ G+  A  +   + G 
Sbjct: 2854 SSGELYTWGLGEYGRLGHGDNLTQLTPKRVES--LVGQRVVQVSCGSRDAQTLALVEGGL 2911

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V +WG G +G LG G  E  S P +V  L+ +   HV  G   +  ++ +G VY++G G+
Sbjct: 2912 VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGD 2971

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
               LGH +      ++H  V  P LV  L+   ++V+ +S+        H  A+T++G++
Sbjct: 2972 YFRLGHGS------DQH--VRWPTLVEGLR--GKKVIGVSVGA-----LHCLAVTDAGQV 3016

Query: 400  YAFGAGDKGQLG 411
            +A+G  D GQ G
Sbjct: 3017 FAWGDNDHGQQG 3028



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 165/341 (48%), Gaps = 25/341 (7%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             A+TS G VY+ G  + G+LG G  E    P  + SLQ + + + A  +G    + +S  
Sbjct: 3660 FAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSE 3719

Query: 114  GQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            G+VY++G+   G+  +G    KL    P+++ESL+   VV  A G   +A ++  G +YT
Sbjct: 3720 GEVYSWGEGEDGKLGHG---NKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYT 3776

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGC 231
            +  G   RLGH    + ++P  L+  L    V+ +A G       A     G  V+S G 
Sbjct: 3777 WGKGRYGRLGHGDSDDQLKPK-LVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGD 3835

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  GKLG G     K P  IE    L +  + V  G+  +  +  +G V TWG G Y  L
Sbjct: 3836 GDYGKLGRGGSDGCKIPTKIESLSGLGI--IKVECGSQFSVALSNNGSVYTWGKGDYHRL 3893

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            GHG +E    PK V  L   K I ++TG     V ++ G+VY++G  +   LG     DG
Sbjct: 3894 GHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLG-----DG 3948

Query: 352  QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
                   +  P+LV +L+  N+++ ++S       +AHT A
Sbjct: 3949 TTT---GIQKPRLVAALQ--NKKINRVSCG-----SAHTVA 3979



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 10/272 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T+ G V+S+G    G+LGHG       PR I +L G R+   AAG+  +  
Sbjct: 2792 SGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAA 2851

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            ++ +G++Y +G   +G   +G   T+L  +P+ VESL    VVQ + G  +  T  L   
Sbjct: 2852 VTSSGELYTWGLGEYGRLGHGDNLTQL--TPKRVESLVGQRVVQVSCGSRDAQTLALVEG 2909

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G VY++  G+  +LG         P  L+  L  + V  +  G  + +AL C      VY
Sbjct: 2910 GLVYSWGDGDFGKLGRGGSEGCSSPC-LVDKLSGLGVCHVECGAQFSVALTCNGH---VY 2965

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + P L+E  +    + + V+ GA H   V   G+V  WG   
Sbjct: 2966 TWGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDND 3023

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            +G  G+G+      P +VQ ++ +K   VA G
Sbjct: 3024 HGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 22/283 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+G  ++  A G   +  
Sbjct: 3708 SGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAA 3767

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  G++Y +GK  +G   +G    +L   P+LVE+L    V+  A   G+  T  ++ E
Sbjct: 3768 ITALGELYTWGKGRYGRLGHGDSDDQL--KPKLVEALLGYRVMDVACGSGDAQTCAITDE 3825

Query: 168  --GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
              G V+++  G+  +LG         P  +E      +L  + ++++  G  + +AL+  
Sbjct: 3826 EGGTVWSWGDGDYGKLGRGGSDGCKIPTKIE------SLSGLGIIKVECGSQFSVALS-- 3877

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +  +VY+ G G   +LGHG     + P+ +   Q    + + ++ GA H  V    G V
Sbjct: 3878 -NNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQ--GKKVISISTGALHCVVCTDQGEV 3934

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
             TWG    G LG G       P++V AL + K   V+ G   T
Sbjct: 3935 YTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHT 3977



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 17/344 (4%)

Query: 48   AIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 104
            ++AG   S+  VT  G  Y+ G  S+G+LG G +     P  I +L    +R +   +G 
Sbjct: 2735 SVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGG 2794

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + ++  G+V+++G+   G+  +G      + +P+ +E+L    V   A G+  +A +
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHG--DVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV 2852

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH      + P   + +L    VVQ++ G      LA    G+
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGDNLTQLTPK-RVESLVGQRVVQVSCGSRDAQTLALVEGGL 2911

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             VYS G G  GKLG G       P L+++   L +    V  GA  +  +  +G V TWG
Sbjct: 2912 -VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV--CHVECGAQFSVALTCNGHVYTWG 2968

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P +V+ L   K I V+ G      V++ G V+++G  +    G
Sbjct: 2969 KGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG 3028

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            + +I     NR      P LV  +  +    V    ++S+ W A
Sbjct: 3029 NGSIT---VNRR-----PTLVQGIDGIKITRVACGSSHSVAWTA 3064


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4846

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 336 EEVCRMASDYSRTCASPDSIQAGEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 395

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  + I 
Sbjct: 396 SFSDAQTIEA--GQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIK 453

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 454 KVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 513

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A++       +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 514 GYRHSAAVS---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 566

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++ 
Sbjct: 567 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 626

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     RVV IS+ +S     
Sbjct: 627 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEEL--ATTRVVDISIGDS----- 670

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 671 HCLALSHDNEVYAWGNNSMGQCG 693



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 20/346 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
            Q + G   +  + + G V + G  S G+LG G +++      I +LQG  + Q       
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGS 4075

Query: 105  -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G++++F  G+  RLG     N   P   +  LE   V Q+A G  + LA++    G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPE-RVSALEGHQVGQVACGLNHTLAVSA--DG 4190

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            M V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGNVYTF 4248

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V AL  V    VA G   T  +S  GDVY++G      L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQL 4308

Query: 344  GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G           H N V  P L+++L+  N + +     +S  W A
Sbjct: 4309 GLG---------HTNHVREPTLISALQGKNIQQISAGRCHSAAWTA 4345



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 24/350 (6%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 101
           ++Q I AG   +  ++S G V + G  S G+LG G +  +   +       + I+ + ++
Sbjct: 399 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 458

Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
            G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G  
Sbjct: 459 KGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 516

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A +S +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL+ 
Sbjct: 517 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 572

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   G+
Sbjct: 573 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 629

Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G  
Sbjct: 630 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWG-- 685

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            + S+G      GQGN    +  P+ V  L  V  + +    ++S+ W A
Sbjct: 686 -NNSMGQC----GQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 730



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 116/243 (47%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G ++SFG+   G+LG G T  +  P  + +L+G ++
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQV 4173

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4174 GQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4231

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + +  +A 
Sbjct: 4232 GTQFSVALTKDGNVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALTGVFIEDVAV 4283

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + L L+   S   VY+ G    G+LG G     + P LI   Q  N+Q   ++AG  
Sbjct: 4284 GAEHTLTLS---STGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQ--ISAGRC 4338

Query: 270  HAA 272
            H+A
Sbjct: 4339 HSA 4341



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQMVTSC 4073

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   ++S G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4132 --AVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALE--GHQVGQVACGLNHTLAVS 4187

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG+VY+
Sbjct: 4188 ADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYT 4247

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ V +L  V    V +          HT  L+
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQVPALTGVFIEDVAVG-------AEHTLTLS 4292

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVRE 4318



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 24/208 (11%)

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWG 284
            V + G G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG
Sbjct: 4033 VSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWG 4092

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG ++SFG G+   L 
Sbjct: 4093 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRL- 4151

Query: 345  HNAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESG-KLYA 401
                  G GN  +N   P+ V++L+  QV +    ++         HT A++  G  ++A
Sbjct: 4152 ------GLGNT-SNKKLPERVSALEGHQVGQVACGLN---------HTLAVSADGMTVWA 4195

Query: 402  FGAGDKGQLGIELVNNQTERGNPERVDI 429
            FG GD G+LG+    N T + +P++VD+
Sbjct: 4196 FGDGDYGKLGL---GNSTAKSSPQKVDV 4220



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 18/179 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 564 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 623

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    VV  +IG+     LS 
Sbjct: 624 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 677

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +  VY  +WGN++      G+ T P   +P  ++G L+ + + QI+AG  + LA    P
Sbjct: 678 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG-LDGVAIQQISAGTSHSLAWTALP 732


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 175/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             ++ +G N  GQLG         P P  +L  +R IQ A G      ++  G++YA G  
Sbjct: 4378 TIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4437

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            +      G+ GT  VT+P LVESL+++ + + A+  G      LS +G V+++  G D +
Sbjct: 4438 A--GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4495

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  I V+ IA G  +    AC  S   V + G G  G+LGHG
Sbjct: 4496 LGHGNRDSYDRPK-LIEALSGIGVIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHG 4551

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4552 DSEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4609

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              VP  +++L  +    V  G   +  ++  G VY++G G+   LGH       GN   +
Sbjct: 4610 CKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-H 4661

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4662 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDGGEVFTWGDNDEGQLG 4707



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 162/342 (47%), Gaps = 17/342 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ + S+ G +Y+ G  ++G+LG G       P+  PI S   ++ +   +G  
Sbjct: 3279 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3338

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              M ++  G+V+++G+   G+  +G + T  +  P+L+E+L+   +   A G+  +A ++
Sbjct: 3339 HAMALTLDGKVFSWGEGEDGKLGHGNRLT--LEKPKLIETLRTKRIRDIACGSSHSAAIT 3396

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH      ++P  L+  L +  VVQ+A G      L     G+ 
Sbjct: 3397 SSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTALADHRVVQVACGSRDAQTLCLTEEGL- 3454

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  +E+   + +  + +  GA  +  + + G V TWG 
Sbjct: 3455 VFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGV--MQIECGAQFSLALTKSGEVWTWGK 3512

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P  +Q L   K IHVA G      V++ G VY++G  +      
Sbjct: 3513 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ--- 3569

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
                 G GN   N   P LV  L  +    V    ++S+ W+
Sbjct: 3570 ----QGSGNTIVNK-KPSLVLGLDGIFVNRVACGSSHSVAWS 3606



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 165/340 (48%), Gaps = 23/340 (6%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
            AVT  G +Y+ G  + G+LG G T+    P  + SLQ + I + A  +G    + +S  G
Sbjct: 4424 AVTPDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDG 4483

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            +V+++G+   G+  +G + +     P+L+E+L  I V+  A G+  +A ++ +G V T+ 
Sbjct: 4484 EVFSWGEGEDGKLGHGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4541

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G   RLGH    + ++P  L+  L     + IA G      L C      V+S G G  
Sbjct: 4542 KGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDY 4599

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            GKLG G     K P  IE   L  L    V  G+  +  + + G V TWG G Y  LGHG
Sbjct: 4600 GKLGRGGSDGCKVPMKIE--SLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4657

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
            N +    PK V AL   K I +ATG       S+ G+V+++G  +   LG   ++  Q  
Sbjct: 4658 NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQ-- 4715

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
                   P+LV SL+   + +V++     I  +AHT AL+
Sbjct: 4716 ------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4742



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 182/381 (47%), Gaps = 40/381 (10%)

Query: 46   SQAIAGPGHSIA-----------VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            ++ IA P +S +           ++SK +V+  G N   QLG     +   P     L  
Sbjct: 3216 NETIAEPSYSTSSNYADEPSLNELSSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQ 3273

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            ++ I  A G+    ++S  G++YA G+ + G    G+     V +P+ V  L    V + 
Sbjct: 3274 LKPIHIAGGSKSLFIVSQDGKLYACGEGTNGR--LGLGHNNNVPTPKQVPILSQYVVKKV 3331

Query: 155  AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
            A+  G      L+ +G+V+++  G D +LGH       +P  L+ TL    +  IA G  
Sbjct: 3332 AVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPK-LIETLRTKRIRDIACGSS 3390

Query: 213  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            +  A+    S   +Y+ G G  G+LGHG    +  P+L+    L + + V VA G+  A 
Sbjct: 3391 HSAAIT---SSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LADHRVVQVACGSRDAQ 3445

Query: 273  VV--GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             +   ++G V +WG G +G LG G  E  S+P  V+ LN V  + +  G   +  +++ G
Sbjct: 3446 TLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSG 3505

Query: 331  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            +V+++G G+   LGH        ++H    TP  +  L+   ++V+ +++        H 
Sbjct: 3506 EVWTWGKGDYYRLGHGT------DQHVRKPTP--IQGLR--GKKVIHVAVGA-----LHC 3550

Query: 391  FALTESGKLYAFGAGDKGQLG 411
             A+T+SG++YA+G  D GQ G
Sbjct: 3551 LAVTDSGQVYAWGDNDHGQQG 3571



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S G V+S+G    G+LGHG  +   RP+ I +L GI +I  A G+  +  
Sbjct: 4471 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSAC 4530

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  G V  +GK  +G   +G    +L   P+LVE+L     +  A   G+  T  ++ +
Sbjct: 4531 ITSQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGYRAIDIACGSGDAQTLCITDD 4588

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V ++  G  + +AL    S   VY
Sbjct: 4589 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVTKVECGSQFSVALTRSGS---VY 4644

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P+ +   Q    + + +A G+ H       G V TWG   
Sbjct: 4645 TWGKGDYHRLGHGNTDHVRRPKKVAALQ--GKKIISIATGSLHCVACSDGGEVFTWGDND 4702

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++VQ+L     + V  G   T  +S
Sbjct: 4703 EGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 18/208 (8%)

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           +E    + V Q A       +L+  G+V +    N      HT P+   P P+ G LE++
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN-----CHT-PDTTAPKPIEG-LESV 628

Query: 203 PVVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
            +VQ+AA +C   ++LAL        V+S G G GG+LGHG  + +  P  I    L   
Sbjct: 629 NIVQLAA-HCEGRHVLALTATGD---VFSWGNGEGGRLGHGDTSSKDIPTRI--VALAER 682

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA-- 317
           Q   V  G+ ++A +   G + TWG G YG LGHGN E + +P +VQ L   + IHVA  
Sbjct: 683 QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALG 742

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGH 345
            GD  +  V++ G VY++G G+   LG+
Sbjct: 743 CGDAHSLCVTDTGIVYAWGDGDFGKLGN 770



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 149/347 (42%), Gaps = 33/347 (9%)

Query: 68  GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
            +N+     HG+T   +    I    G+++ Q A       +++  GQV +         
Sbjct: 556 AANNVACFAHGSTSR-YSTATIELPAGVQVRQVACSETSIYILTTTGQVLSL-------- 606

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-H 184
           ++    T   T+P+ +E L+++ +VQ A       VL+       FSWGN    RLGH  
Sbjct: 607 QHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGD 666

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
           T   D+ P  ++   E     Q+   +C     A   +   +Y+ G G  G+LGHG+  D
Sbjct: 667 TSSKDI-PTRIVALAER----QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSED 721

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           +  P +++  +   +  V +  G  H+  V   G V  WG G +G LG+G     SVP  
Sbjct: 722 KHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVA 781

Query: 305 VQALN-DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++       A+ V +G + +  +  DG VYS+G G                   +  +P+
Sbjct: 782 IELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGR--------LGHGHSEHTASPK 833

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            + +L+  N   + + L       AH  ALT SG+LY +G  D  QL
Sbjct: 834 AIQALEGKNIVDLAVGL-------AHCLALTASGELYGWGRNDFQQL 873



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 12/310 (3%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTML-ISDAGQV 116
           TS  ++ + G   S Q  +  T +   P+PI  L+ + I+Q AA   GR +L ++  G V
Sbjct: 592 TSIYILTTTGQVLSLQHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDV 651

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           +++G    G   +G   +K +  P  + +L    V     G+ ++A ++  G +YT+  G
Sbjct: 652 FSWGNGEGGRLGHGDTSSKDI--PTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRG 709

Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
              RLGH    +   P  ++  L+   V+ +A G     +L    +G+ VY+ G G  GK
Sbjct: 710 TYGRLGHGNSEDKHLP-TIVQVLKQQRVIHVALGCGDAHSLCVTDTGI-VYAWGDGDFGK 767

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           LG+G+      P  IE  Q  +   V V +G+  +  +G+DG V +WG G  G LGHG+ 
Sbjct: 768 LGNGTCNGSSVPVAIELPQCSD-GAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHS 826

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           E  + PK +QAL     + +A G      ++  G++Y +G  +   L    +      R 
Sbjct: 827 EHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCV-----TRD 881

Query: 357 ANVLTPQLVT 366
             VL P L T
Sbjct: 882 PIVLLPILTT 891



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHGT +   +P PI+ L+G ++I  A GA  
Sbjct: 3490 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3549

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D+GQVYA+G +  G+   G   T +   P LV  L  IFV + A G+
Sbjct: 3550 CLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLDGIFVNRVACGS 3599



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)

Query: 39  ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           A   R+ +    G  +S A+T+ G +Y++G  + G+LGHG +E++  P  ++ L+  R+I
Sbjct: 678 ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI 737

Query: 99  QAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGV-QGTKL---VTSPQLVESLKNIFVV 152
             A G G   ++ ++D G VYA+G   FG+   G   G+ +   +  PQ  +    +F  
Sbjct: 738 HVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFS- 796

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
               G+ F+  L R+G VY++  G+  RLGH    +   P   +  LE   +V +A G  
Sbjct: 797 ----GSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKA-IQALEGKNIVDLAVGLA 851

Query: 213 YLLAL 217
           + LAL
Sbjct: 852 HCLAL 856



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 11/236 (4%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T+ G V+S+G+   G+LGHG T  +  P  I +L   ++     G+  +  I+ A
Sbjct: 641 HVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAA 700

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G++Y +G+ ++G   +G    K +  P +V+ LK   V+  A+  G+  +  ++  G VY
Sbjct: 701 GELYTWGRGTYGRLGHGNSEDKHL--PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            +  G+  +LG+ T      P  +     +   V++ +G  + +AL        VYS G 
Sbjct: 759 AWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALG---RDGTVYSWGK 815

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           G GG+LGHG       P+ I+  +  N+  V +A G  H   +   G +  +GWGR
Sbjct: 816 GHGGRLGHGHSEHTASPKAIQALEGKNI--VDLAVGLAHCLALTASGEL--YGWGR 867



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           C     +  +G   S+A+   G VYS+G    G+LGHG +E    P+ I++L+G  I+  
Sbjct: 787 CSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDL 846

Query: 101 AAGAGRTMLISDAGQVYAFGKDSF 124
           A G    + ++ +G++Y +G++ F
Sbjct: 847 AVGLAHCLALTASGELYGWGRNDF 870


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 168/352 (47%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G ++ +G N  GQLG     +   P    +L  +R +Q   G      I+  G+V A G 
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT  V +P L+ES++++F+ + AI  G      LS EG VY++  G D 
Sbjct: 3996 GA--GGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDG 4053

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  +  +L    VV IAAG  +    AC  S   +YS G G  G+LGH
Sbjct: 4054 KLGHGNRSPCDRPRAI-ESLRGKEVVDIAAGGAHS---ACITSTGELYSWGKGRYGRLGH 4109

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L++  +   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4110 GDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 4169

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + AL  +  I V  G   +  +++ G VY++G G+   LGH            ++
Sbjct: 4170 KVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGT--------EDHI 4221

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+  T+L+   +++V I+       + H  A T++G++Y +G  D+GQLG
Sbjct: 4222 RRPRRCTTLQ--GKKIVSIACG-----SLHCVACTDAGEVYTWGDNDEGQLG 4266



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 22/350 (6%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N   QLG     +   P    +L  ++ +Q   G+     ++  G+++A G+ +
Sbjct: 2916 VFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEAT 2975

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+     V  P+ + SL    + + A+  G      L+ +G+V+++  G+D +L
Sbjct: 2976 NGRLGLGISAGN-VPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3034

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH +  N  +P  L+  L +  V  IA G  +  A+    S   +Y+ G G  G+LGHG 
Sbjct: 3035 GHFSRMNCDKPR-LIEALRSKRVRDIACGGSHSAAII---SNGDLYTWGLGEYGRLGHGD 3090

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
             T +  P+L++  +   +  V + +       +   G V +WG G +G LG G  E  SV
Sbjct: 3091 NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSV 3150

Query: 302  PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
            P  ++ LN V    +  G   +  +++ G V+++G G+   LGH           A+V  
Sbjct: 3151 PHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT--------DAHVRK 3202

Query: 362  PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            PQLV +LK   ++V  +++        H  ++ ++G++YA+G  D GQ G
Sbjct: 3203 PQLVETLK--GKKVTHVAVG-----ALHCLSVLDNGQVYAWGDNDHGQQG 3245



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 10/285 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++++G VYS+G    G+LGHG      RPR I SL+G  ++  AAG   +  
Sbjct: 4030 SGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSAC 4089

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  G++Y++GK  +G   +G   ++  T P+LV++LK   V   A   G+  T  ++ +
Sbjct: 4090 ITSTGELYSWGKGRYGRLGHG--DSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDD 4147

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   +  L+ + V+++  G  + +AL    SG AVY
Sbjct: 4148 DSVWSWGDGDYGKLGRGGSDGCKVPMK-IDALQGLGVIKVECGSQFSVALT--KSG-AVY 4203

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + PR     Q    + V +A G+ H       G V TWG   
Sbjct: 4204 TWGKGDYHRLGHGTEDHIRRPRRCTTLQ--GKKIVSIACGSLHCVACTDAGEVYTWGDND 4261

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
             G LG G       P++V AL   K   VA G   +   S +  V
Sbjct: 4262 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPV 4306



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 166/373 (44%), Gaps = 20/373 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQG--IRIIQAAAG 103
            Q + G      VT  G +++ G  ++G+LG G +     +PR + SL    I+ +   +G
Sbjct: 2951 QIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSG 3010

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                M ++  G+V+++G+   G+   G         P+L+E+L++  V   A G   +A 
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAA 3068

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            +   G +YT+  G   RLGH      + P  L+  LE   V+Q+A G      LA   SG
Sbjct: 3069 IISNGDLYTWGLGEYGRLGHGDNTTQLRPK-LVKALEGQRVIQVALGSRDAQTLALTDSG 3127

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              VYS G G  GKLG G       P  IE+   + +    +  GA  +  + + G+V TW
Sbjct: 3128 -TVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV--CQIECGAQFSLALTKSGQVWTW 3184

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G G Y  LGHG +     P++V+ L   K  HVA G      V ++G VY++G  +    
Sbjct: 3185 GKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQ- 3243

Query: 344  GHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
                    QGN    V   P LV  L+      V    ++SI W     ++  S +   F
Sbjct: 3244 --------QGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAWCTLDSSVPASHEPVLF 3295

Query: 403  GAGDKGQLGIELV 415
             +  +  LG  L+
Sbjct: 3296 SSA-RDPLGSSLI 3307



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 18/357 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q I G     ++T  G V + G  + G+LG G T+    P  I S+Q + I + A  +G 
Sbjct: 3973 QLIGGEQTLFSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGG 4032

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P+ +ESL+   VV  A G   +A +
Sbjct: 4033 KHCLALSAEGEVYSWGEGEDGKLGHGNRSP--CDRPRAIESLRGKEVVDIAAGGAHSACI 4090

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +Y++  G   RLGH    +  +P  L+  L+   V  +A G      L C     
Sbjct: 4091 TSTGELYSWGKGRYGRLGHGDSEDQTKPK-LVDALKGYRVTDVACGSGDAQTL-CITDDD 4148

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +V+S G G  GKLG G     K P  I+  Q L +  + V  G+  +  + + G V TWG
Sbjct: 4149 SVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGV--IKVECGSQFSVALTKSGAVYTWG 4206

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG E+    P+    L   K + +A G       ++ G+VY++G  +   LG
Sbjct: 4207 KGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG 4266

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
                 DG  N    +  P+LV +L+      V     +S+ W+  T     +GKL A
Sbjct: 4267 -----DGTTN---AIQRPRLVAALQGKKINRVACGSAHSLAWS--TNKPVNAGKLPA 4313



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 10/276 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+TS+G VYS+G+   G+LGHG T     P  I  L G  ++  A G+  +  I+ +
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITAS 548

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G+++ +G+ SFG    G+  T+ + +P LV  L  + VV  A   G+  T  L+  G VY
Sbjct: 549 GELFTWGRGSFG--RLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVY 606

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G   +LG         P  L+  L+ + V ++  G  Y  A+ C+    AV++ G 
Sbjct: 607 SWGDGEYGKLGRGGSEGCKAPK-LVDKLQGLDVTRVYCGPQYSAAV-CK--NGAVFTWGN 662

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G KLGHG+    + PR +E   L       ++ G+ H     ++G + +WG    G L
Sbjct: 663 GEGYKLGHGTEEHVRFPRQVE--TLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQL 720

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           G G+   ++ P    +L     I +      TF  S
Sbjct: 721 GEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFAWS 756



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 33/317 (10%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           IIQ A  +   +++   G+VY     +  ++ + +             +L +I +++ A 
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEIS------------TLADIEIIKLAA 483

Query: 157 GN--FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            +       L+ EG VY++  G+  +LGH        P  L+  L    VV +A G  + 
Sbjct: 484 HSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPM-LINELHGKSVVNVACGSHHS 542

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            A+    SG  +++ G G  G+LG GS  D   P L+     + +  V   +G      +
Sbjct: 543 AAITA--SG-ELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIAL 599

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              G V +WG G YG LG G  E    PK+V  L  +    V  G   +  V ++G V++
Sbjct: 600 ADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFT 659

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G GE   LGH      +  R    L  + VTSL                  + H  A T
Sbjct: 660 WGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLS---------------LGSHHCLATT 704

Query: 395 ESGKLYAFGAGDKGQLG 411
           E G+L ++G  DKGQLG
Sbjct: 705 EEGELLSWGRNDKGQLG 721



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 9/148 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  HS A+T+ G ++++G  S G+LG G+TE+   P  +  L G+ ++  A G+G  +T+
Sbjct: 538 GSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTI 597

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++D G VY++G   +G  + G  G++   +P+LV+ L+ + V +   G  ++A + + G
Sbjct: 598 ALADTGSVYSWGDGEYG--KLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNG 655

Query: 169 RVYTFSWGNDARLGHHTE-----PNDVE 191
            V+T+  G   +LGH TE     P  VE
Sbjct: 656 AVFTWGNGEGYKLGHGTEEHVRFPRQVE 683



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 20/175 (11%)

Query: 256  LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 313
            L  ++PV +  G      +  DG+VC  G+G  G LG G  +  + P +++++  V  + 
Sbjct: 3966 LATMRPVQLIGGEQTLFSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRK 4025

Query: 314  IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
            + + +G      +S +G+VYS+G GE   LGH       GNR +    P+ + SL+   +
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWGEGEDGKLGH-------GNR-SPCDRPRAIESLR--GK 4075

Query: 374  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             VV I+        AH+  +T +G+LY++G G  G+LG     +QT+   P+ VD
Sbjct: 4076 EVVDIAAGG-----AHSACITSTGELYSWGKGRYGRLGHGDSEDQTK---PKLVD 4122



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           ++   GP +S AV   G V+++G+    +LGHGT E    PR + +L G  +   + G+ 
Sbjct: 639 TRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSH 698

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             +  ++ G++ ++G++  G+   G  G K    P    SL    ++     +  T   S
Sbjct: 699 HCLATTEEGELLSWGRNDKGQLGEGHTGLK--AEPAFAASLLGKCIIGITCSSAQTFAWS 756

Query: 166 REGR 169
           R  R
Sbjct: 757 RPSR 760



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   +IA+   G VYS+G    G+LG G +E    P+ +  LQG+ + +   G   +  
Sbjct: 591 SGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAA 650

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G     +  +G +  + V  P+ VE+L    V   ++G+      + EG 
Sbjct: 651 VCKNGAVFTWGNGEGYKLGHGTE--EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE 708

Query: 170 VYTFSWGNDAR 180
           +   SWG + +
Sbjct: 709 L--LSWGRNDK 717



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 19/111 (17%)

Query: 305 VQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           +  L D++ I +A    G +   + SE GDVYS+G G+   LGH               +
Sbjct: 470 ISTLADIEIIKLAAHSEGSHCLALTSE-GDVYSWGNGDFGKLGHGDTVTCD--------S 520

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           P L+  L          S+ N    + H+ A+T SG+L+ +G G  G+LG+
Sbjct: 521 PMLINELHGK-------SVVNVACGSHHSAAITASGELFTWGRGSFGRLGL 564


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 176/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             ++ +G N  GQLG         P P  +L  +R IQ A G      ++  G++YA G  
Sbjct: 4090 TIFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4149

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            +      GV GT  VT+P LVESL+++ + + A+  G      LS +G V+++  G D +
Sbjct: 4150 A--GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4207

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+ +L  I VV IA G  +   +  Q     V + G G  G+LGHG
Sbjct: 4208 LGHGNRDSYDRPK-LIESLSGIGVVDIACGSAHSACITIQGH---VLTWGKGRYGRLGHG 4263

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4264 DSEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4321

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              VP  +++L  +    V  G   +  ++  G VY++G G+   LGH       GN   +
Sbjct: 4322 CKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-H 4373

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A +++G+++ +G  D+GQLG
Sbjct: 4374 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAGEVFTWGDNDEGQLG 4419



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 173/358 (48%), Gaps = 29/358 (8%)

Query: 58   VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
            V+SK +V+  G N   QLG     +   P     L  ++ I  A G+    ++S  G++Y
Sbjct: 3026 VSSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083

Query: 118  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSW 175
            A G+ + G    G+     V +P+ V  L    V + A+  G      L+ +G+V+++  
Sbjct: 3084 ACGEGTNGR--LGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3141

Query: 176  GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            G D +LGH       +P  L+ TL    +  IA G  +  A+    S   +Y+ G G  G
Sbjct: 3142 GEDGKLGHGNRLTLEKPK-LIETLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYG 3197

Query: 236  KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 293
            +LGHG    +  P+L+   Q  + + V VA G+  A    + +DG V +WG G +G LG 
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQ--DHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGR 3255

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G  E  S+P  V  LN V  + +  G   +  +++ G+V+++G G+   LGH        
Sbjct: 3256 GGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGT------ 3309

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++H    TP  +  L+   ++V+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3310 DQHVRKPTP--IQGLR--GKKVIHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 3358



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 165/340 (48%), Gaps = 23/340 (6%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
            AVT  G +Y+ G  + G+LG G T+    P  + SLQ + I + A  +G    + +S  G
Sbjct: 4136 AVTPDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDG 4195

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            +V+++G+   G+  +G + +     P+L+ESL  I VV  A G+  +A ++ +G V T+ 
Sbjct: 4196 EVFSWGEGEDGKLGHGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWG 4253

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G   RLGH    + ++P  L+  L     + IA G      L C      V+S G G  
Sbjct: 4254 KGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDY 4311

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
            GKLG G     K P  IE   L  L    V  G+  +  + + G V TWG G Y  LGHG
Sbjct: 4312 GKLGRGGSDGCKVPMKIES--LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4369

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
            N +    PK V AL   K I +ATG       S+ G+V+++G  +   LG   ++  Q  
Sbjct: 4370 NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQ-- 4427

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
                   P+LV SL+   + +V++     I  +AHT AL+
Sbjct: 4428 ------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4454



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +P+ I +L+  RI   A G+  +  
Sbjct: 3122 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAA 3181

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P+LV +L++  VVQ A G  +  T  L+ +
Sbjct: 3182 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALQDHRVVQVACGSRDAQTLCLTED 3239

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G V+++  G+  +LG         PH  +  L  + V+QI  G  + LAL        V+
Sbjct: 3240 GLVFSWGDGDFGKLGRGGSEGCSIPHQ-VDRLNGVGVMQIECGAQFSLALT---KAGEVW 3295

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
            + G G   +LGHG+   ++H R     Q L  + V+ VA GA H   V   G+V  WG  
Sbjct: 3296 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3352

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
             +G  G GN      P +V  L+ +    VA G
Sbjct: 3353 DHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S G V+S+G    G+LGHG  +   RP+ I SL GI ++  A G+  +  
Sbjct: 4183 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSAC 4242

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+  G V  +GK  +G   +G    +L   P+LVE+L     +  A   G+  T  ++ +
Sbjct: 4243 ITIQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGYRAIDIACGSGDAQTLCITDD 4300

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + V ++  G  + +AL    S   VY
Sbjct: 4301 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVTKVECGSQFSVALTRSGS---VY 4356

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P+ +   Q    + + +A G+ H       G V TWG   
Sbjct: 4357 TWGKGDYHRLGHGNTDHVRRPKKVAALQ--GKKIISIATGSLHCVACSDAGEVFTWGDND 4414

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++VQ+L     + V  G   T  +S
Sbjct: 4415 EGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 5/181 (2%)

Query: 39  ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           A   R+ +    G  +S A+T+ G +Y++G  + G+LGHG +E+++ P  + +L+  R++
Sbjct: 657 ALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVV 716

Query: 99  QAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             A G G   ++ +++AG  +A+G   FG  + G +     + P  V+  +   VV+   
Sbjct: 717 HVALGCGDAHSLCVTEAGLAFAWGDGDFG--KLGNESCVGTSVPVQVDLPQASCVVKVFS 774

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G+ F+  L+REG VYT+  G+  RLGH    +   P  ++  LE   +V +A G  + LA
Sbjct: 775 GSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPK-MVQALEGKKIVDLAVGLAHCLA 833

Query: 217 L 217
           L
Sbjct: 834 L 834



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 28/214 (13%)

Query: 204 VVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           +VQ+AA +C   ++LALA   S   VYS G G GG+LGHG  + ++ P  I    L + Q
Sbjct: 609 IVQLAA-HCEGRHVLALA---SSGDVYSWGSGDGGRLGHGDTSAKELPTRIA--ALADRQ 662

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT-- 318
              V  G+ ++A +   G + TWG G YG LGHGN E + VP +V AL   + +HVA   
Sbjct: 663 VTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           GD  +  V+E G  +++G G+   LG+ +                 V +   V   + Q 
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGNESC----------------VGTSVPVQVDLPQA 766

Query: 379 SLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 411
           S    ++  +  + ALT  G +Y +G G  G+LG
Sbjct: 767 SCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLG 800



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 23/255 (9%)

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           L+  G VY++  G+  RLGH     D     L   +  +   Q+   +C     A   + 
Sbjct: 624 LASSGDVYSWGSGDGGRLGH----GDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             +Y+ G G  G+LGHG+  D+  P L+   +   +  V +  G  H+  V + G    W
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739

Query: 284 GWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           G G +G L  GNE C   SVP  V        + V +G   +  ++ +G VY++G G   
Sbjct: 740 GDGDFGKL--GNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGG 797

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LGH        + H+ V  P++V +L+   +++V +++       AH  ALT SG+LY 
Sbjct: 798 RLGHG------NSEHSPV--PKMVQALE--GKKIVDLAVG-----LAHCLALTASGELYG 842

Query: 402 FGAGDKGQLGIELVN 416
           +G  D  Q+  E V 
Sbjct: 843 WGRNDFQQICPECVT 857



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 20/240 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+ S G VYS+GS   G+LGHG T  +  P  I +L   ++     G+  +  I+ +
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G++Y +G+ ++G   +G    K V  P LV +LK   VV  A+  G+  +  ++  G  +
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYV--PTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVY 227
            +  G+  +LG+ +      P  +     ++P    VV++ +G  + +AL  + +   VY
Sbjct: 738 AWGDGDFGKLGNESCVGTSVPVQV-----DLPQASCVVKVFSGSQFSVALTREGT---VY 789

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G GG+LGHG+      P++++  +    + V +A G  H   +   G +  +GWGR
Sbjct: 790 TWGKGHGGRLGHGNSEHSPVPKMVQALE--GKKIVDLAVGLAHCLALTASGEL--YGWGR 845



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 19/191 (9%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           S T++ +P  ++  +   +Q      G  H   +   G V +WG G  G LGHG+   + 
Sbjct: 592 SMTEDNYPAQVKGLECTIVQLAAHCEGR-HVLALASSGDVYSWGSGDGGRLGHGDTSAKE 650

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +P  + AL D +   V  G   +  ++  G++Y++G G    LGH       GN   +  
Sbjct: 651 LPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGH-------GNSE-DKY 702

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P LVT+LK    RVV ++L      +AH+  +TE+G  +A+G GD G+LG     N++ 
Sbjct: 703 VPTLVTALKA--HRVVHVALGCG---DAHSLCVTEAGLAFAWGDGDFGKLG-----NESC 752

Query: 421 RGNPERVDIDL 431
            G    V +DL
Sbjct: 753 VGTSVPVQVDL 763



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHGT +   +P PI+ L+G ++I  A GA  
Sbjct: 3277 QIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3336

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D+GQVYA+G +  G+   G   T +   P LV  L  IFV + A G+
Sbjct: 3337 CLAVTDSGQVYAWGDNDHGQQ--GSGNTIVNKKPSLVLGLDGIFVNRVACGS 3386



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +  +G   S+A+T +G VY++G    G+LGHG +E    P+ +++L+G +I+  A G   
Sbjct: 771 KVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAH 830

Query: 107 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLV 143
            + ++ +G++Y +G++ F +     V    ++T+P L 
Sbjct: 831 CLALTASGELYGWGRNDFQQICPECVTRDPIITAPILT 868



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 28/141 (19%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H +AVT  G VY++G N  GQ G G T    +P  +  L GI + + A G+  ++  
Sbjct: 3333 GALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3392

Query: 111  S--------DAGQ--VYAFGKDSFGEAEYGVQGTK---LVTSP---------------QL 142
            S        D  +   +A  KD  G    G+  +      +SP               ++
Sbjct: 3393 SLPQNQTEKDKKEPVPFAVAKDPLGSHSLGIYASDTEATTSSPLPVPSGSKQQRPSLSEI 3452

Query: 143  VESLKNIFVVQAAIGNFFTAV 163
            V SL+     QAA+ +   A+
Sbjct: 3453 VLSLETASARQAALSHIINAM 3473


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G ++ +G N  GQLG     +  +P    +L   R IQ   G      ++  G+V+A G 
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      GV GT+ V+ P  +ES++++F+ + A+  G      LS EG VY++  G D 
Sbjct: 4521 GA--GGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDG 4578

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L    VV IAAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 4579 KLGHGNRSPCDRPR-VIDSLRGKEVVDIAAGGAHS---ACITANGELYTWGKGRYGRLGH 4634

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  +   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4635 GDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4694

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  ++ L     + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4695 KVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGS--------DDHV 4746

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V++L+  N++V+ ++       + H  A T++G+++++G  D+GQLG
Sbjct: 4747 RRPRKVSALQ--NKKVIDVACG-----SLHCVACTDTGEVFSWGDNDEGQLG 4791



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 26/352 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N   QLG     +   P    +L  +R +Q   G+     ++  G+VYA G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+  T  V+ P+ + SL    + + A+  G   +  L+ +G+V+++  G+D +L
Sbjct: 3526 NGRLGLGIT-TGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH +  N  +P  L+  L++  V  IA G  +  A+    S   +Y+ G G  G+LGHG 
Sbjct: 3585 GHFSRWNCDKPR-LIEALKSKRVRDIACGSSHSAAIT---SNGDLYTWGLGEYGRLGHGD 3640

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
             T +  P+ ++   L + + V VA G+  A  +    +G+V +WG G +G LG G  E  
Sbjct: 3641 NTTQLKPKQVK--ALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGC 3698

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            +VP  V  L D K   +  G   +  +++ G V+++G G+   LGH           A+V
Sbjct: 3699 NVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT--------DAHV 3750

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              PQ+V  LK   +++V +++        H  A+T+SG+++A+G  D GQ G
Sbjct: 3751 RKPQIVEGLK--GKKIVHVAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG 3795



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 22/357 (6%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G     AVT++G V++ G  + G+LG G TE    P  + S+Q + I + A  +G 
Sbjct: 4498 QLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGG 4557

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S  G+VY++G+   G+  +G +       P++++SL+   VV  A G   +A +
Sbjct: 4558 KHCLALSAEGEVYSWGEGEDGKLGHGNRSP--CDRPRVIDSLRGKEVVDIAAGGAHSACI 4615

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    +   P  L+  L++  VV +A G      L C     
Sbjct: 4616 TANGELYTWGKGRYGRLGHGDSEDQPRPK-LVEALKSYRVVDMACGSGDAQTL-CITDDD 4673

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE  Q   +  + V  G+  +  + + G V TWG
Sbjct: 4674 NVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGV--MKVECGSQFSVALTKSGSVYTWG 4731

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG+++    P+ V AL + K I VA G       ++ G+V+S+G  +   LG
Sbjct: 4732 KGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG 4791

Query: 345  HNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKL 399
                 DG  N    +  P+LV SL  K++N   V     +S+ W+  T     +GKL
Sbjct: 4792 -----DGTTN---AIQRPRLVASLLGKKINR--VACGSAHSLAWS--TNKAVSAGKL 4836



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 129/257 (50%), Gaps = 19/257 (7%)

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           L+ +G V+++  G+  +LGH    N  EP  + G L    V +I  G  Y +AL    S 
Sbjct: 634 LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSSYSVALT---SN 689

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             VYS G G  G+LGHGS  D+  P L++ F+   +  V   +G      V   G V +W
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSW 749

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G YG LG G  +    PKV++ L     + V  G+  +  +++ G VY++G G++  L
Sbjct: 750 GDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRL 809

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH          HA    P+ + +L   +++V  I++      + H  A+TE G+LY +G
Sbjct: 810 GHGT------EDHAR--HPKQIEALS--SKKVKDIAIG-----SLHCMAITEDGELYGWG 854

Query: 404 AGDKGQLGIELVNNQTE 420
             ++GQLG   ++N TE
Sbjct: 855 RNEQGQLGNPSISNFTE 871



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 145/293 (49%), Gaps = 9/293 (3%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQG--IRIIQAAAG 103
            Q + G      VT +G VY+ G  ++G+LG G TT     PR I SL    I+ +   +G
Sbjct: 3501 QIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSG 3560

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
               ++ ++  G+V+++G+   G+  +  +       P+L+E+LK+  V   A G+  +A 
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN--CDKPRLIEALKSKRVRDIACGSSHSAA 3618

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++  G +YT+  G   RLGH      ++P  +   L +  VVQ+A G      LA    G
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQV-KALAHERVVQVACGSRDAQTLALTDEG 3677

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              VYS G G  GKLG G       P  +++ +  + +   +  GA  +  + + G+V TW
Sbjct: 3678 -KVYSWGDGDFGKLGRGGSEGCNVPHEVDRLR--DQKVCQIECGAQFSLALTKSGQVWTW 3734

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G G Y  LGHG +     P++V+ L   K +HVA G      V++ G V+++G
Sbjct: 3735 GKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWG 3787



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           ++ ++   G  +S+A+TS G VYS+G  + G+LGHG++E++  P  ++  +G RI+  A 
Sbjct: 671 KQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVAC 730

Query: 103 GAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           G+G  +T+ ++D+G VY++G   +G  + G  G     +P+++E L    VV+   GN F
Sbjct: 731 GSGDAQTLAVTDSGAVYSWGDGDYG--KLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQF 788

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALAC 219
           +  L++ G VYT+  G++ RLGH TE  D   HP  +  L +  V  IA G  + +A+  
Sbjct: 789 SMALTKSGAVYTWGKGDNYRLGHGTE--DHARHPKQIEALSSKKVKDIAIGSLHCMAIT- 845

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
                 +Y  G    G+LG+ S ++   P LI
Sbjct: 846 --EDGELYGWGRNEQGQLGNPSISNFTEPTLI 875



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 135/272 (49%), Gaps = 11/272 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  HS+A+T+ G V+S+G    G+LGH +     +PR I +L+  R+   A G+  +  
Sbjct: 3559 SGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAA 3618

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+  G +Y +G   +G   +G   T+L   P+ V++L +  VVQ A G  +  T  L+ E
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQL--KPKQVKALAHERVVQVACGSRDAQTLALTDE 3676

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G+VY++  G+  +LG         PH  +  L +  V QI  G  + LAL    SG  V+
Sbjct: 3677 GKVYSWGDGDFGKLGRGGSEGCNVPHE-VDRLRDQKVCQIECGAQFSLALT--KSGQ-VW 3732

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  WG   
Sbjct: 3733 TWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKI--VHVAVGALHCLAVTDSGQVFAWGDND 3790

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            +G  G+G       P +V  L   K   VA G
Sbjct: 3791 HGQQGNGTTTVNRKPALV-VLEGYKISKVACG 3821



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H + +TS G V+S+G+   G+LGHG  +    P  I  L G ++ +   G+  ++ ++  
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G+VY++GK +FG   +G    +  T+P L++  K   +V  A   G+  T  ++  G VY
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQ--TTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LG         P  ++  L    VV++  G  + +AL    SG AVY+ G 
Sbjct: 748 SWGDGDYGKLGRGGNDGCKTPK-VIEKLMGQDVVRVYCGNQFSMALT--KSG-AVYTWGK 803

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHG+    +HP+ IE      ++   +A G+ H   + +DG +  WG    G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSKKVKD--IAIGSLHCMAITEDGELYGWGRNEQGQL 861

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
           G+ +    + P ++  +     I VA G   TF
Sbjct: 862 GNPSISNFTEPTLIGGMEGKNIIGVACGPTQTF 894



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 13/142 (9%)

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H   +  DG V +WG G  G LGHG+ +    P ++  L+  +   +  G   +  ++ +
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G+VYS+G G    LGH +  D          TP L+   K    R+V ++  +    +A 
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQT--------TPMLLKFFK--GHRIVDVACGSG---DAQ 736

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T A+T+SG +Y++G GD G+LG
Sbjct: 737 TLAVTDSGAVYSWGDGDYGKLG 758



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHGT     +P+ +  L+G +I+  A GA  
Sbjct: 3714 QIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALH 3773

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
             + ++D+GQV+A+G +  G+   G   T +   P LV
Sbjct: 3774 CLAVTDSGQVFAWGDNDHGQQGNGT--TTVNRKPALV 3808



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 36/78 (46%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   ++      G  H +A+T  G +Y +G N  GQLG+ +      P  I  ++G  I
Sbjct: 824 EALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNI 883

Query: 98  IQAAAGAGRTMLISDAGQ 115
           I  A G  +T   +  GQ
Sbjct: 884 IGVACGPTQTFAWTSGGQ 901


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 172/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P    +L  +R +Q   G      ++  G++YA G 
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4010

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4011 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4068

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  + VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4069 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4124

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L++  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4125 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4184

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             +P  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 4185 KIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4236

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4237 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4281



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G++
Sbjct: 2951 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 3010

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  +  P+ + +L N  + + A+  G      L+ +G+V+++ 
Sbjct: 3011 YACGEATNGRLGLGL-SSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWG 3069

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  
Sbjct: 3070 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEY 3125

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 3126 GRLGHGDNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLG 3183

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  +VP+ ++ LN      +  G   +  +++ G V+++G G+   LGH       
Sbjct: 3184 RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT----- 3238

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3239 ---DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3287



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3979 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4038

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ + VV  A
Sbjct: 4039 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4096

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ +A G     
Sbjct: 4097 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4155

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L      M V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4156 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKIPMKID--SLTGLGVVKVECGSQFSVALT 4212

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY++
Sbjct: 4213 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4272

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+  T   T 
Sbjct: 4273 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 4322

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 4323 AGKLPA 4328



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 41/343 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
           P   ++L  + + Q        +++S +G VY+             Q  K  T +P L+ 
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS-------------QNYKSTTLAPMLIH 479

Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
            L +  +V+ A    G  + A LS  G V+++  G+  RLGH       EP  ++GT   
Sbjct: 480 VLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPK-MIGTFNG 537

Query: 202 IP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
                 VV +A G  Y  A+    +   +Y+ G G  G+LGHGS  D+  P ++  F+ L
Sbjct: 538 KQAGKHVVHVACGSTYSAAIT---ADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGL 594

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V 
Sbjct: 595 KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 654

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G   +  +++DG VY++G G++  LGH            +V  P+L+ SL+   ++VV 
Sbjct: 655 CGSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRYPKLLDSLQ--GKKVVD 704

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +++ ++     H  ALT+ G++ ++G+ DK Q    L +N+ +
Sbjct: 705 VAVGST-----HCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQ 742



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T+ G +Y++G  + G+LGHG++E++  P  + + +G++++  A G+G  +T+
Sbjct: 550 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+LVE L+++ +V+   G+ F+  L+++G
Sbjct: 610 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 667

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH T+ +   P  LL +L+   VV +A G  + LAL
Sbjct: 668 QVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGKKVVDVAVGSTHCLAL 715



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G +Y+ G  ++G+LG G +      PR I +L    I+ +  
Sbjct: 2990 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAV 3049

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3050 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3107

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +Y++  G   RLGH      + P  L+  L    V+Q+A G      LA  
Sbjct: 3108 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3166

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G  V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3167 DEGF-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3222

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P++V+ L   K +HVA G      V++ G VY++G
Sbjct: 3223 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3279



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3110

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            I+ +G++Y++G   +G   +G   T+L   P+LV+ L    V+Q A G+     L+    
Sbjct: 3111 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3168

Query: 170  VYTFSWGND--ARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
             + FSWG+    +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3220

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 3221 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3277

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3314



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 22/288 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A++S G V+S+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 497 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAA 556

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T+P +V + K + VV  A   G+  T  ++  
Sbjct: 557 ITADGELYTWGRGNYGRLGHGSSEDQ--TTPMVVTAFKGLKVVDVACGSGDAQTLAVTEN 614

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 670

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG--- 284
           + G G   +LGHG+    ++P+L++  Q    + V VA G+ H   +  DG V +WG   
Sbjct: 671 TWGKGDNQRLGHGTDEHVRYPKLLDSLQ--GKKVVDVAVGSTHCLALTDDGEVLSWGSND 728

Query: 285 -WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
               +  L    ++    PK +  LN    + ++ G   +F  S   +
Sbjct: 729 KLQHFDTLFSNKKQ----PKALPGLNSKHIVGISCGPGQSFAWSSSSE 772



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG   E   V+       L  +  VQ+  G   L A+   
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVT-- 4000

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4001 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4059

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 4060 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4119

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 4120 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 4166

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 4167 SWGDGDYGKLG 4177



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 9/164 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ +  LQ + I++   G+  ++ 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 662

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  GQVY +GK   G+ +    GT + V  P+L++SL+   VV  A+G+     L+ +G
Sbjct: 663 LTKDGQVYTWGK---GDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDG 719

Query: 169 RVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAG 210
            V   SWG++ +L H      N  +P  L G L +  +V I+ G
Sbjct: 720 EV--LSWGSNDKLQHFDTLFSNKKQPKALPG-LNSKHIVGISCG 760



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3199 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3253

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3254 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3311

Query: 155  AIGN 158
            A G+
Sbjct: 3312 ACGS 3315


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 12/297 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   + A++  G VY++GS   G+LGH     E  PR + +L+G  I++ + G      
Sbjct: 98  AGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAA 157

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREG 168
           I   G +Y +G+     A  G  GT+ V  P+L++  L+   V+  + G   TA ++ +G
Sbjct: 158 IDKDGHLYCWGR----AASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKG 213

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+T+  G +  LGH  + +  +P  +    E   VV +A G  + +   C+     +YS
Sbjct: 214 EVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEK--VVDVACGRDFTI-FVCES---GLYS 267

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG G    E+  +         L  VV ++AG +H   +G+DG V TWG GR
Sbjct: 268 CGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGR 327

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G LGHG +   S+ K V  L + + + VA G   T  V++DG +Y++G G    LG
Sbjct: 328 EGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG 384



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 177/376 (47%), Gaps = 31/376 (8%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           A+ +  ++ +FG N  GQLG G      RP P+ +L G RI+  AAG   T  IS  G V
Sbjct: 53  ALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDV 112

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           Y +G   +G+  +     + +  P+LVE+LK   +V+ +IG    A + ++G +Y   WG
Sbjct: 113 YTWGSGEYGKLGHNDDSNENL--PRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYC--WG 168

Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
             A  G     +   P  + G LE   V+ ++ G  +  A+  +     V++ G G  G+
Sbjct: 169 RAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGE---VWTWGNGYEGE 225

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           LGHG +  +  P+   + Q L  + V VA G      V + G + + G   YG LG G  
Sbjct: 226 LGHGEKNSQYQPK---KVQSLTEKVVDVACGRDFTIFVCESG-LYSCGADDYGQLGLGRS 281

Query: 297 ECE---SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
             E     P+ +        + ++ GDY    +  DG VY++G G    LGH   AD   
Sbjct: 282 HGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKAD--- 338

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI- 412
               ++  P  V +L+  N  +VQ++         HT A+T+ G LY +G G  GQLG  
Sbjct: 339 ---CSLAKP--VDNLR--NFEIVQVACG-----GGHTAAVTKDGVLYTWGRGRDGQLGRG 386

Query: 413 -ELVNNQTERGNPERV 427
            EL +  + R +P +V
Sbjct: 387 GELESIASYRTSPVQV 402



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 21/210 (10%)

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A   +G  + + G  L G+LG G       P  +E   L   + V VAAG    A +  D
Sbjct: 52  AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEA--LSGKRIVYVAAGDSCTAAISLD 109

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G V TWG G YG LGH ++  E++P++V+AL     + V+ G      + +DG +Y +G 
Sbjct: 110 GDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGR 169

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
             SA  G        G  H  V  P+L+    +  E+V+ +S   S     HT A+TE G
Sbjct: 170 AASAGSG--------GTEH--VFIPRLIKGDLE-KEKVISVSCGRS-----HTAAVTEKG 213

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           +++ +G G +G+LG    N+Q +   P++V
Sbjct: 214 EVWTWGNGYEGELGHGEKNSQYQ---PKKV 240


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Felis catus]
          Length = 4861

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4360



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 27/332 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72

Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ + + QIA G  + L
Sbjct: 73  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A+        V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V 
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG +  WGWGRYG LG G+     +P+ V ++   K + VA G   T  VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P  V +LK  +  + QIS      W  HT ALT 
Sbjct: 247 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSTISQISGG----WR-HTMALTS 291

Query: 396 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            GKLY +G    GQ+G   V N  +  +P +V
Sbjct: 292 EGKLYGWGWNKFGQVG---VGNNDDHSSPGQV 320



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 139/296 (46%), Gaps = 9/296 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ +  V+ S+G    GQLGHG  E+   P  +       I     GA  T  
Sbjct: 20  AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  QVY++G   FG   +G   +  V +PQ V++L+ + + Q A G+     ++  G
Sbjct: 80  YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 137

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    E++ V  IAAG  +  A+        +Y 
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFESVCVKMIAAGAEHTAAVTEDGD---LYG 193

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +   +   +  V+VA G  H   V   G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 251

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G LGHG+ E   VP  V+AL D     ++ G   T  ++ +G +Y +G  +   +G
Sbjct: 252 GQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 136/262 (51%), Gaps = 11/262 (4%)

Query: 46  SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+ A +   + VYS+G    G+LGHG + + + P+P+++LQG++I Q A G 
Sbjct: 68  TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 127

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG+V ++G++  G+   G     L+  PQ +++ +++ V   A G   TA +
Sbjct: 128 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAV 185

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     + + P   + ++E   +V +A G+ + + ++   +  
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEK-VSSVEGEKMVLVACGWRHTITVSDSGN-- 242

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
            +Y+ G    G+LGHG   D   P  +E  +   +  +   +G W H   +  +G++  W
Sbjct: 243 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI---SGGWRHTMALTSEGKLYGW 298

Query: 284 GWGRYGCLGHGNEECESVPKVV 305
           GW ++G +G GN +  S P  V
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQV 320


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Equus caballus]
          Length = 4860

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+LV  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLVEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST--DG 4204

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4323 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4359



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+V+ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4188 GQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4297

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4352

Query: 270  HAA 272
            H+A
Sbjct: 4353 HSA 4355



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSTDGSMVWAFGD 4212

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4306

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+LVE L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLVEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 51/343 (14%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-------------------------- 83
           AG  HS+A+    VV S+G    GQLGHG  E+                           
Sbjct: 23  AGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82

Query: 84  ---------------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 128
                          + P+PI++L G+RI Q A G    + ++  G+V ++G++  G+  
Sbjct: 83  YSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLG 142

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 188
            G     LV  PQ +++ + + V   A G   TA ++ +G +Y + WG    LG     +
Sbjct: 143 LGTTEDSLV--PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 200

Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
            + P   + T+E + +V++A G+ + ++++   S   +Y+ G    G+LGHG   D   P
Sbjct: 201 RLVPEK-VSTVEGVKMVKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFEDHLTP 256

Query: 249 RLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
             +E  Q   +  +   +G W H   +  DG++  WGW ++G +G G+      P  V+ 
Sbjct: 257 HKLEALQENLISEI---SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 313

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            ++ K +H++ G   T  V+E  +V+S+G G +  LGH    D
Sbjct: 314 PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 356



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V S+G N +GQLG GTTE+   P+ I++ QG+ +   AAGA  
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEH 172

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G++Y +G   +G    G +  +LV  P+ V +++ + +V+ A G   T  +S 
Sbjct: 173 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSS 230

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L    EN+ + +I+ G+ + +AL    S   +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENL-ISEISGGWRHTMALT---SDGKL 286

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G   D   P    Q +  + Q VV  +  W H   V +   V +WG 
Sbjct: 287 YGWGWNKFGQVGVGDNVDHCSPV---QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 343

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LGHG     ++PK+++ L+
Sbjct: 344 GTNGQLGHGESIDRNIPKMIEVLS 367



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 152/327 (46%), Gaps = 43/327 (13%)

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           P+R     R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L 
Sbjct: 14  PVR-----RVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALD 66

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
              VV    G   T   S E     +SWG D             P P+   L  + + QI
Sbjct: 67  GHEVVSVTCGADHTTAYS-ESFTQVYSWGCDL----------FTPQPIK-ALHGLRIKQI 114

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + LA+        V S G    G+LG G+  D   P+ I+ FQ ++++  +VAAG
Sbjct: 115 ACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAAG 169

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           A H A V +DG +  WGWGRYG LG G+     VP+ V  +  VK + VA G   T  VS
Sbjct: 170 AEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVS 229

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY-- 385
             G +Y++G  +   LGH    D         LTP  + +L++        +L + I   
Sbjct: 230 SSGGLYTYGWSKYGQLGHGDFEDH--------LTPHKLEALQE--------NLISEISGG 273

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGI 412
           W  HT ALT  GKLY +G    GQ+G+
Sbjct: 274 WR-HTMALTSDGKLYGWGWNKFGQVGV 299


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4099

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4100 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4214

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4272

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4333 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4369



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4197

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4198 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4255

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4256 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4307

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4308 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4362

Query: 270  HAA 272
            H+A
Sbjct: 4363 HSA 4365



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4175

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4176 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4222

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4223 GDYGKLGL---GNSTAKSSPQKVDV 4244



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4097

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4155

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4156 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4211

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4212 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4272 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4316

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4317 STGDVYAWGSNSEGQLGLGHTNHVRE 4342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
           mutus]
          Length = 4874

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 339 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 398

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 399 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 456

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 457 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 516

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 517 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 569

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 630 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 673

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 674 HCLALSHDNEVYAWGNNSMGQCG 696



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 402 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 459

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 460 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 517

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 518 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 575 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 630

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 631 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 688

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 689 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 163/353 (46%), Gaps = 24/353 (6%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4092

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4093 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4150

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC---- 219
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q      + L +AC    
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQARNNTLFFLQVACGLNH 4209

Query: 220  ----QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
                   G  V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + 
Sbjct: 4210 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALT 4267

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++
Sbjct: 4268 KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4327

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      LG      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4328 GSNSEGQLGL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4372



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 33/253 (13%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4131 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4190

Query: 98   ----------IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
                      +Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L
Sbjct: 4191 GQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVL 4248

Query: 147  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTL 199
              I + + A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L   
Sbjct: 4249 CGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA-- 4301

Query: 200  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
              + +  +A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N+
Sbjct: 4302 -GVVIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNV 4357

Query: 260  QPVVVAAGAWHAA 272
            +   ++AG  H+A
Sbjct: 4358 RQ--ISAGRCHSA 4368



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 28/213 (13%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4051 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4110

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4111 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4168

Query: 346  NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNA------HTFALTESG 397
                 G GN  +N   P+ VT+L+  Q+ +     +  N++++        HT A++  G
Sbjct: 4169 -----GLGNT-SNKKLPERVTALEGYQIGQ-----ARNNTLFFLQVACGLNHTLAVSADG 4217

Query: 398  KL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
             + +AFG GD G+LG+    N T + +P++VD+
Sbjct: 4218 SMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 4247



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 39/337 (11%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4090

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4091 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4148

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-----------LLNLQPVVV 264
              A   S   +++ G G  G+LG G+ +++K P  +   +           L  LQ   V
Sbjct: 4149 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQ---V 4203

Query: 265  AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            A G  H   V  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +
Sbjct: 4204 ACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFS 4263

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
              +++DG VY+F  G+   +G   + +G+   H     PQ +  L  V    V +     
Sbjct: 4264 VALTKDGHVYTF--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG---- 4311

Query: 384  IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
                 HT AL  +G +YA+G+  +GQLG+   N+  E
Sbjct: 4312 ---AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4345



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 567 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 626

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 627 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 680

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 681 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 736

Query: 223 GMAV 226
              V
Sbjct: 737 DRQV 740


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Ailuropoda melanoleuca]
          Length = 4861

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4360



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
           guttata]
          Length = 4864

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 182/383 (47%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAS 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++   ++N+  V  + G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD--IINVGEV--SCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q + G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4093

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4094 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + +A++    G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST--DG 4208

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G   +  + +DG V T+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4266

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L  V    +A G   T  +S  GDVY++G      L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4327 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4363



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 177/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDIIN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V  L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTA 735



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4191

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4192 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4249

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V   PLL     + +  IA 
Sbjct: 4250 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PLLA---GVFIEDIAV 4301

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LAL+   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4302 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4356

Query: 270  HAA 272
            H+A
Sbjct: 4357 HSA 4359



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4169

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4170 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGD 4216

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VDI
Sbjct: 4217 GDYGKLGL---GNSTAKSSPQKVDI 4238



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4091

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4149

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   +   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4150 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTVAVS 4205

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4206 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            FG  +   +G   + +G+   H     PQ V  L  V    + +          HT AL+
Sbjct: 4266 FG--QDRLIG---LPEGRARNHNR---PQQVPLLAGVFIEDIAVG-------AEHTLALS 4310

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4311 STGDVYAWGSNSEGQLGLGHTNHVRE 4336



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)

Query: 29  LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPR 87
           LV   +  GE  C         G  H+IA++  G  V+SFG   +G+LGHG T   ++P+
Sbjct: 556 LVKDIINVGEVSC---------GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPK 606

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVE 144
            I +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L+E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIE 660

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
            L    +V  +IG+     LS +  VY  +WGN++  + G       +     +G L+ I
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPITKPKKVGGLDGI 718

Query: 203 PVVQIAAGYCYLLALACQPSGMAV 226
            + QI+AG  + LA    P    V
Sbjct: 719 AIQQISAGTSHSLAWTALPRDRQV 742


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4085

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4086 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4143

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4200

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4258

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4319 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4124 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4183

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4184 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4241

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4242 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4293

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4294 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4348

Query: 270  HAA 272
            H+A
Sbjct: 4349 HSA 4351



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4044 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4103

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4104 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4161

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4162 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4208

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4209 GDYGKLGL---GNSTAKSSPQKVDV 4230



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4083

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4084 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4141

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4142 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4197

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4198 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4257

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4258 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4302

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4303 STGDVYAWGSNSEGQLGLGHTNHVRE 4328



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+LV  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLVEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4095

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4096 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4153

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST--DG 4210

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4268

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P L+T L+  N R +     +S  W A
Sbjct: 4329 GL-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWTA 4365



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+V+ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4134 EALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4193

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4194 GQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4251

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     + +  +A 
Sbjct: 4252 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4303

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LA+    S   VY+ G    G+LG G     + P LI   Q  N++   ++AG  
Sbjct: 4304 GAEHTLAIT---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4358

Query: 270  HAA 272
            H+A
Sbjct: 4359 HSA 4361



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4054 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4113

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4114 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRL-- 4171

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4172 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSTDGSMVWAFGD 4218

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4219 GDYGKLGL---GNSTAKSSPQKVDV 4240



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4093

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4094 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4151

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   +   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4152 --AVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4207

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4208 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4267

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT A+T
Sbjct: 4268 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLAIT 4312

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4313 STGDVYAWGSNSEGQLGLGHTNHVRE 4338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+LVE L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLVEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
           cuniculus]
          Length = 4860

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4204

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4323 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4359



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4188 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     + +  +A 
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4297

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4298 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4352

Query: 270  HAA 272
            H+A
Sbjct: 4353 HSA 4355



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4212

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 4306

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 STGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
           (Silurana) tropicalis]
          Length = 4842

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 27/361 (7%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           G +  V+    VY +GSNSS QL  GT E+  +P+        + I+A  G   T +IS 
Sbjct: 363 GENPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEA--GQYCTFVIST 420

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 171
            G V A GK S+G    G    +        E  ++I  V ++ G +  T   + EG V+
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LGH        P  + GTL+   VV ++AGY +  A+        +Y+ G 
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT---EDGELYTWGE 537

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
           G  G+LGHG       P L++    +      V+ G+ H   + +DGR V ++G G  G 
Sbjct: 538 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG  A LG      
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC----- 646

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
             G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++YA+G    GQ 
Sbjct: 647 --GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEVYAWGNNSMGQC 697

Query: 411 G 411
           G
Sbjct: 698 G 698



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4071

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4072 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4129

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE + + Q+A G  + LA++    G
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSA--DG 4186

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4187 SLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4244

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P++V  L  +    +A G   T  +S  G+VY++G      L
Sbjct: 4245 GQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQL 4304

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT+L+  N R +     +S  W A
Sbjct: 4305 GL-----GHTN---HVREPTLVTALQGKNIRQISAGRCHSAAWTA 4341



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 38/310 (12%)

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           +G   ++S+  +VY +G +S  +   G Q  + +  P+L     +   ++A  G + T V
Sbjct: 362 SGENPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPCFSDAQTIEA--GQYCTFV 417

Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
           +S +G V     G+  RLG     N         EPH    +++ +   + + G+     
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGTLQGKVVVCVSAGYRHSAAVTE 528

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
           DG + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT 
Sbjct: 587 GGGDNGKLGH-----GDTNR---VYKPKVVEALQGMFTRKVCAGSQSSL-------ALTS 631

Query: 396 SGKLYAFGAG 405
           +G++YA+G G
Sbjct: 632 TGQVYAWGCG 641



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 179/364 (49%), Gaps = 27/364 (7%)

Query: 32  RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRP 86
           + L    A C  +     AG   +  +++ G V + G  S G+LG G     +T ++   
Sbjct: 392 KILQPKLAPCFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-S 145
            P RS++  ++  +    G T+  +  G+V+++G   +G+  +G   T+    P+L++ +
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGT 507

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L+   VV  + G   +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V 
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VG 564

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           +++ G  + +AL+    G  V+S G G  GKLGHG       P+++E  Q +  + V   
Sbjct: 565 EVSCGSSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKV--C 620

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTF 324
           AG+  +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD    
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCL 678

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +S D +VY++G   + S+G      GQGN    +  P+ V+ L  V  + +    ++S+
Sbjct: 679 ALSHDNEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731

Query: 385 YWNA 388
            W A
Sbjct: 732 AWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 24/248 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G+ I
Sbjct: 4110 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHI 4169

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4170 GQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4227

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P       L+  L  I +  IA 
Sbjct: 4228 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQ------LVPVLLGIFIDDIAV 4279

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---A 266
            G  + LAL+   SG  VY+ G    G+LG G     + P L+   Q  N++ +      +
Sbjct: 4280 GAEHTLALSA--SG-EVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHS 4336

Query: 267  GAWHAAVV 274
             AW AA V
Sbjct: 4337 AAWTAAPV 4344



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4069

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4070 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4127

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   +   +++ G G  G+LG G+ +++K P  +   + L++  V  A G  H   V 
Sbjct: 4128 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQV--ACGLNHTLAVS 4183

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4184 ADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4243

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQLV  L       + I + +      HT AL+
Sbjct: 4244 F--GQDRLIG---LPEGRARNHNR---PQLVPVL-------LGIFIDDIAVGAEHTLALS 4288

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             SG++YA+G+  +GQLG+   N+  E
Sbjct: 4289 ASGEVYAWGSNSEGQLGLGHTNHVRE 4314



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4030 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4089

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4090 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4147

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+ ++   V   L        HT A++  G L +AFG 
Sbjct: 4148 -----GLGNT-SNKKLPERVTALEGLHIGQVACGLN-------HTLAVSADGSLVWAFGD 4194

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4195 GDYGKLGL---GNSTAKSSPQKVDV 4216



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+   +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 172/356 (48%), Gaps = 34/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    PR I       + Q + G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           + + +  + +   +    PQL+  L++  ++Q + G+  +  LS  G+V   SWG++   
Sbjct: 67  NDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH TE   V+   ++  L +  VVQIA G  + LAL    S   +YS G  + G+LG 
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177

Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
            S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              + P  ++ L  +     A GD  +  ++ +G V++ G G    LGH           
Sbjct: 236 TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           +N + P++V  L  +   + Q++  N      HT A   S GK+YAFG G  GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLAFVPSRGKVYAFGLGSSGQLG 336



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 160/306 (52%), Gaps = 21/306 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP+ I  LQ   IIQ + G+  
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +SD GQV ++G +  G+  +  +  ++V  P++V  L +  VVQ A GN  +  L+ 
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
            G +Y  SWG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG AV+  G    G+LG    T+  +P  ++  + L ++    A G   +  +  +G 
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FAACGDEFSVFLTNEGG 270

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T   V   G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLG 330

Query: 339 ESASLG 344
            S  LG
Sbjct: 331 SSGQLG 336



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 94  QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV     +T    P  + +L  I +   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V   A G  + + L  +  
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFAACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A V   G+V 
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSRGKVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 20/208 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   PR I       +Q V  + G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQV--SCGHRHTLFLTATGK 60

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   Y  LGH  +     P+++  L D   I ++ G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH             V  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATEKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +  AA G   
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A + 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLAFVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             G+VY F  G+  +LG  +  + + P  ++G
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
           niloticus]
          Length = 4936

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 171/361 (47%), Gaps = 27/361 (7%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           G +  V+    VY +GSNSS QL  GT E+  +P+   S    + I+A  G   T +IS 
Sbjct: 370 GETPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQTIEA--GQYCTFVISS 427

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 171
            G V A GK S+G    G    +        E  + I  V ++ G +  T   + EG V+
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LGH        P  + G L+   VV ++AGY +  A++       +Y+ G 
Sbjct: 488 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS---EDGELYTWGE 544

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
           G  G+LGHG       P L++    +      V+ G+ H   + +DGR V ++G G  G 
Sbjct: 545 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 600

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG  A LG      
Sbjct: 601 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC----- 653

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
             G+  A  L P+L+  L     RVV IS+ +S     H  AL+   ++YA+G    GQ 
Sbjct: 654 --GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEVYAWGNNSMGQC 704

Query: 411 G 411
           G
Sbjct: 705 G 705



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
            Q + G   +  +   G V + G  S G+LG G +++      I +LQG  + Q   +   
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4165

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4166 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4223

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   V Q+A G  + L ++    G
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSAD--G 4280

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            M V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G   +  + +DG+V T+
Sbjct: 4281 MMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGKVFTF 4338

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L+ +    VA G   T V+S  GDVY++G      L
Sbjct: 4339 GQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQL 4398

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT+L+  N   +     +S  W A
Sbjct: 4399 GL-----GHTN---HVREPTLVTTLQGKNIHQISAGRCHSAAWTA 4435



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 24/350 (6%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 101
           ++Q I AG   +  ++S G V + G  S G+LG G +  +   +       + I+ + ++
Sbjct: 411 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 470

Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
            G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G  
Sbjct: 471 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 528

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A +S +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL+ 
Sbjct: 529 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 584

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   G+
Sbjct: 585 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 641

Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G  
Sbjct: 642 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWG-- 697

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            + S+G      GQGN    +  P+ V  L  V  + +    ++S+ W A
Sbjct: 698 -NNSMGQC----GQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 742



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G  +
Sbjct: 4204 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHV 4263

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+++S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4264 GQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4321

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G+V+TF  G D  +G       +H  P  V        L  I +  +A 
Sbjct: 4322 GTQFSVALTKDGKVFTF--GQDRLIGLPEGRARNHNRPQQVP------GLSGIHIQDVAV 4373

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + L L+   S   VY+ G    G+LG G     + P L+   Q  N+    ++AG  
Sbjct: 4374 GAEHTLVLS---STGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQ--ISAGRC 4428

Query: 270  HAA 272
            H+A
Sbjct: 4429 HSA 4431



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 29/239 (12%)

Query: 201  NIPVVQIAAGYCYLLALAC--------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            NI V  IA  +     + C        QP+G  V + G G  G+LG G+  D     +I 
Sbjct: 4091 NILVPTIAPSFSQAQQVVCGQNCTFVIQPNG-TVLACGEGSYGRLGQGNSDDLHVLTVIS 4149

Query: 253  QFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              Q   +  +V + G+  H+  + + G V +WG G YG LGHGN + +  P+ ++AL   
Sbjct: 4150 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4209

Query: 312  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
            + + ++ G   + VV+ DG +++FG G+   L       G GN  +N   P+ VT+L+  
Sbjct: 4210 EVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-------GLGNT-SNKKLPEKVTALEGY 4261

Query: 372  NERVVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            +   V   L        HT  ++  G + +AFG GD G+LG+    N T + +P++VD+
Sbjct: 4262 HVGQVACGLN-------HTLVVSADGMMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 4310



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4163

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4164 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4221

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   +   +++ G G  G+LG G+ +++K P  +   +  ++  V  A G  H  VV 
Sbjct: 4222 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQV--ACGLNHTLVVS 4277

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG V++
Sbjct: 4278 ADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFT 4337

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            FG  +   +G   + +G+   H     PQ V  L  ++ + V +          HT  L+
Sbjct: 4338 FG--QDRLIG---LPEGRARNHNR---PQQVPGLSGIHIQDVAVG-------AEHTLVLS 4382

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +Y +G+  +GQLG+   N+  E
Sbjct: 4383 STGDVYTWGSNSEGQLGLGHTNHVRE 4408



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 576 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 635

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    VV  +IG+     LS 
Sbjct: 636 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 689

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  ++G L+ + + QI+AG  + LA    P 
Sbjct: 690 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG-LDGVAIQQISAGTSHSLAWTALPR 745

Query: 223 GMAV 226
              V
Sbjct: 746 DRQV 749


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 171/356 (48%), Gaps = 30/356 (8%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
           K  V  +GS + GQLG G  EEE    PR IRS   + ++  A G   T+ +   G+V +
Sbjct: 8   KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
            G + +G+  +     K    P L++SL    V+QA+ G   + VL+  G+V+T+    D
Sbjct: 68  CGNNDYGQLGH----EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNED 123

Query: 179 ARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
            +LG     +     P ++  L +  VVQ+A G  + + L    +   +Y+ G    G+L
Sbjct: 124 NQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT---ATGQIYTWGSNNHGQL 180

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           G  ++T +  P+ +     L   P+V VAAGA H  V+   G +  WG   +G LG G++
Sbjct: 181 GLANKTPQNEPQWVSCISGL---PIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDD 237

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           +    P +V+ L +     +A GD  +  ++ DG V++FG G    LGHN          
Sbjct: 238 QDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT--------S 289

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 411
            N L P+ V  L  +   V QI+         H+ A +  SG++Y FG G  GQLG
Sbjct: 290 NNELLPRKVFEL--MGSSVTQIACGRK-----HSIAYVPSSGRVYVFGLGGNGQLG 338



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 150/305 (49%), Gaps = 9/305 (2%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           C  E      G  H++ V   G V S G+N  GQLGH    +  RP  I SL    ++QA
Sbjct: 42  CNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCK--RPALIDSLGERNVLQA 99

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           ++G   + +++DAGQV+ +G +   +   G   +   + P++V  L +  VVQ A G+  
Sbjct: 100 SSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAH 159

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G++YT+   N  +LG   +    EP   +  +  +P+V++AAG  + L L   
Sbjct: 160 TVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQ-WVSCISGLPIVRVAAGADHNLVLTI- 217

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            SG A+++ GC   G+LG G   D   P L++   L N     +A G  H+  + +DG V
Sbjct: 218 -SG-ALFAWGCNSFGQLGVGDDQDRGAPTLVK--TLRNQGICALACGDDHSLALTRDGGV 273

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
            T+G G YG LGH     E +P+ V  L       +A G  ++   V   G VY FG G 
Sbjct: 274 FTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGG 333

Query: 340 SASLG 344
           +  LG
Sbjct: 334 NGQLG 338



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 6/234 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G +Y++GSN+ GQLG      +  P+ +  + G+ I++ AAGA  
Sbjct: 152 QVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADH 211

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
            ++++ +G ++A+G +SFG  + GV   +   +P LV++L+N  +   A G+  +  L+R
Sbjct: 212 NLVLTISGALFAWGCNSFG--QLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTR 269

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G V+TF  G   +LGH+T  N++ P  +   L    V QIA G  +  ++A  PS   V
Sbjct: 270 DGGVFTFGAGMYGQLGHNTSNNELLPRKVF-ELMGSSVTQIACGRKH--SIAYVPSSGRV 326

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           Y  G G  G+LG GS  +   P +++    +     VV  GA H +  GQ   V
Sbjct: 327 YVFGLGGNGQLGTGSTVNRMSPAMVKG-PFVAFGAEVVDKGAIHFSQHGQPHMV 379



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 15/270 (5%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQ 99
            R   QA +G  HS  +T  G V+++GSN   QLG G  +      PR +R L   +++Q
Sbjct: 93  ERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQ 152

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            A G+  T+ ++  GQ+Y +G ++ G  + G+        PQ V  +  + +V+ A G  
Sbjct: 153 VACGSAHTVGLTATGQIYTWGSNNHG--QLGLANKTPQNEPQWVSCISGLPIVRVAAGAD 210

Query: 160 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              VL+  G +  F+WG ++  +LG   + +   P  L+ TL N  +  +A G  + LAL
Sbjct: 211 HNLVLTISGAL--FAWGCNSFGQLGVGDDQDRGAP-TLVKTLRNQGICALACGDDHSLAL 267

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQ 276
                   V++ G G+ G+LGH +  +E  PR +  F+L+      +A G  H+ A V  
Sbjct: 268 T---RDGGVFTFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPS 322

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            GRV  +G G  G LG G+      P +V+
Sbjct: 323 SGRVYVFGLGGNGQLGTGSTVNRMSPAMVK 352



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 25/305 (8%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V  +G  + G+   G    + VT P+ + S  N+ VV  A G   T  + ++GRV +   
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            +  +LGH       +   L+ +L    V+Q ++G  +   L        V++ G     
Sbjct: 71  NDYGQLGHEKP---CKRPALIDSLGERNVLQASSGTKHSTVLT---DAGQVFTWGSNEDN 124

Query: 236 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG G         PR++    L + + V VA G+ H   +   G++ TWG   +G LG 
Sbjct: 125 QLGRGQVDSASTSIPRMVRG--LADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            N+  ++ P+ V  ++ +  + VA G     V++  G ++++GC     LG   + D Q 
Sbjct: 183 ANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG---VGDDQ- 238

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
           +R A    P LV +L+  N+ +  ++  +      H+ ALT  G ++ FGAG  GQLG  
Sbjct: 239 DRGA----PTLVKTLR--NQGICALACGDD-----HSLALTRDGGVFTFGAGMYGQLGHN 287

Query: 414 LVNNQ 418
             NN+
Sbjct: 288 TSNNE 292



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 22/195 (11%)

Query: 235 GKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           G+LG G   +E    PR I  F   N++ V +A G  H   V +DGRV + G   YG LG
Sbjct: 20  GQLGLGGLEEETVTLPREIRSF--CNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLG 77

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           H  + C+  P ++ +L +   +  ++G   + V+++ G V+++G  E   LG   +    
Sbjct: 78  H-EKPCKR-PALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDS-- 133

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
               A+   P++V  L   + +VVQ++  +     AHT  LT +G++Y +G+ + GQLG+
Sbjct: 134 ----ASTSIPRMVRGL--ADHKVVQVACGS-----AHTVGLTATGQIYTWGSNNHGQLGL 182

Query: 413 ELVNNQTERGNPERV 427
               N+T +  P+ V
Sbjct: 183 A---NKTPQNEPQWV 194


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4079

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4080 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4137

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4194

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4252

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4313 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4349



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4118 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4177

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4178 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4235

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4236 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4287

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4288 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4342

Query: 270  HAA 272
            H+A
Sbjct: 4343 HSA 4345



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4038 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4097

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4098 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4155

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4156 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4202

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4203 GDYGKLGL---GNSTAKSSPQKVDV 4224



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4077

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4078 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4135

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4136 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4191

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4192 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4251

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4252 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4296

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4297 STGDVYAWGSNSEGQLGLGHTNHVRE 4322



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A++       +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVS---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A +S +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4094

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   V+Q + G   +AV
Sbjct: 4095 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQMSCGFKHSAV 4152

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4209

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4267

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4327

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P L+T L+  N R +     +S  W A
Sbjct: 4328 GL-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWTA 4364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4133 EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4192

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4193 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4250

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4251 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4302

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG  
Sbjct: 4303 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4357

Query: 270  HAA 272
            H+A
Sbjct: 4358 HSA 4360



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4053 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4112

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + I ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4113 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4170

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4171 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4217

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4218 GDYGKLGL---GNSTAKSSPQKVDV 4239



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4092

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   V+Q++ G+ +  
Sbjct: 4093 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHS- 4150

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4151 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4206

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4207 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4266

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4267 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4311

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4312 STGDVYAWGSNSEGQLGLGHTNHVRE 4337



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4322 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4358



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4351

Query: 270  HAA 272
            H+A
Sbjct: 4352 HSA 4354



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 167/364 (45%), Gaps = 38/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ +T  G V+++G NS+GQLG   T  + R  P R      I+   +G   ++ 
Sbjct: 73  AGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQ-RLSPARLPVLEDIVSVVSGDAHSLA 131

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G +S G+   G   T     PQ VE   ++  V A  G+F + VL  +G 
Sbjct: 132 LGADGTVWTWGSNSSGQLGDGT--TTDRAEPQRVEGFTDVVAVAA--GDFHSLVLKSDGT 187

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG +   +LG       + P P+ G LE   VV +AAG+ + LA+       AV 
Sbjct: 188 VW--AWGTNFHGQLGQGHTQTGLWPKPVPG-LEG--VVALAAGFDFTLAVHAD---GAVS 239

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G    G+LG G+ T    P  I     +      VAAG +HA  +G+DG V TWG   
Sbjct: 240 SWGANSFGQLGLGTFTQRLSPERIPTLSGIT----SVAAGTYHAVALGKDGTVWTWGSNS 295

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G     +VP  +  +   +A  VA+ D  +  + E GDV ++G   S  LG   
Sbjct: 296 SGQLGDGTWNDRAVPAPLPGVGGARA--VASLDAGSLALLEGGDVLAWGANNSGQLGDGD 353

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            AD          TP LV  L  V   V             H  AL + G L+A+G G  
Sbjct: 354 TADRS--------TPSLVPELSAVTAVVGGAQ---------HALALRKDGTLWAWGGGLA 396

Query: 408 GQLG 411
           GQLG
Sbjct: 397 GQLG 400



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 172/413 (41%), Gaps = 85/413 (20%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE------------------------- 83
           ++G  HS+A+ + G V+++GSNSSGQLG GTT +                          
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVL 182

Query: 84  ------WR-------------------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
                 W                    P+P+  L+G  ++  AAG   T+ +   G V +
Sbjct: 183 KSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDFTLAVHADGAVSS 240

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G +SFG+   G    +L  SP+ + +L  I  V A  G +    L ++G V+T+   + 
Sbjct: 241 WGANSFGQLGLGTFTQRL--SPERIPTLSGITSVAA--GTYHAVALGKDGTVWTWGSNSS 296

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LG  T  +   P PL G      V  + AG   LL       G  V + G    G+LG
Sbjct: 297 GQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALL------EGGDVLAWGANNSGQLG 350

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
            G   D   P L+ +   +      V  GA HA  + +DG +  WG G  G LGHG  E 
Sbjct: 351 DGDTADRSTPSLVPELSAVT----AVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             VP  V  L +V ++  ATG + +    EDG V+++G      LG   + +    RH  
Sbjct: 407 HVVPATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTE----RHVP 460

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V  P L  S++ V                 H+ A+   G ++ +G    GQLG
Sbjct: 461 VRVPGL-PSVRAVAAA------------GHHSIAVAMDGTVWTWGRNAAGQLG 500



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 180/393 (45%), Gaps = 41/393 (10%)

Query: 37   GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
            G +C R   S    G  HS+ +   G V+++G N  GQLG GTT     P  +  L+G  
Sbjct: 815  GVSCARSVAS----GGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEG-- 868

Query: 97   IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
            I+  A G   ++ +   G V+A+G ++ G+   G    +L  +P+ +E+L ++ V+  A+
Sbjct: 869  IVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRL--TPRRIEALSDVMVI--AL 924

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
            G      +  +G V+ +      +LG   E   + P  + G LE   V  +AAG  +  +
Sbjct: 925  GESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKG-LEG--VGSVAAGRAF--S 979

Query: 217  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            LA +  G A ++ G    G+LG GS    + P  +   + L      V+AGA HA  +G+
Sbjct: 980  LAVRDDGTA-WAWGANESGQLGDGSNQSRRVPHRVASVKGLR----AVSAGAHHAMALGE 1034

Query: 277  DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            DG V  WG    G LG G      + P+ V  L+DV++  VA G+  +  V+ DG  +S+
Sbjct: 1035 DGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVES--VAAGEQFSVAVAHDGTAFSW 1092

Query: 336  GCGESASLGHNAIADGQ-GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            G  E   LG     DG+ G R    L+P  V         VV +       W  H  AL 
Sbjct: 1093 GSNEYGQLG-----DGKTGPR----LSPAEVKIGGSKARTVVTVG-----AWGQHAVALM 1138

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
              G L A+G    GQLG       T R +P  +
Sbjct: 1139 ADGTLQAWGDNATGQLGD---GTTTRRSSPGEI 1168



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 174/407 (42%), Gaps = 75/407 (18%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ + S G V+++G+N  GQLG G T+    P+P+  L+G+  +  AAG   T+ 
Sbjct: 174 AGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV--VALAAGFDFTLA 231

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V ++G +SFG+   G    +L  SP+ + +L  I  V A  G +    L ++G 
Sbjct: 232 VHADGAVSSWGANSFGQLGLGTFTQRL--SPERIPTLSGITSVAA--GTYHAVALGKDGT 287

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL-------------- 215
           V+T+   +  +LG  T  +   P PL G      V  + AG   LL              
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSG 347

Query: 216 -------------------------------ALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                                          ALA +  G  +++ G GL G+LGHG    
Sbjct: 348 QLGDGDTADRSTPSLVPELSAVTAVVGGAQHALALRKDGT-LWAWGGGLAGQLGHGG--S 404

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           E+H        L N+    +A G++H+    +DG V  WG   YG LG G      VP  
Sbjct: 405 ERHVVPATVMGLTNV--TSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVR 462

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           V  L  V+A  VA   + +  V+ DG V+++G   +  LG     DG     A    P  
Sbjct: 463 VPGLPSVRA--VAAAGHHSIAVAMDGTVWTWGRNAAGQLG-----DGTTRDRAR---PVA 512

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V+ L      V+ I+   S     H  AL   G ++A+G    GQLG
Sbjct: 513 VSGLTS----VLAIAAGGS-----HVLALRSDGDVWAWGYNALGQLG 550



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 168/367 (45%), Gaps = 38/367 (10%)

Query: 47  QAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +A+A  GH SIAV   G V+++G N++GQLG GTT +  RP  +  L  +  I  AAG  
Sbjct: 470 RAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAI--AAGGS 527

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             + +   G V+A+G ++ G+   G  G KL  +P  V  L  I  V A  G +F+  L+
Sbjct: 528 HVLALRSDGDVWAWGYNALGQLGDGTSGDKL--TPVRVPGLAPIQSVAA--GTYFSMALA 583

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G V+T+  G + +LG       + P  + G L +I  + + + +    ALA +  G  
Sbjct: 584 NDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKG-LSDIRNISVGSAH----ALAVRGDGT- 637

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           V++ G    G+LG GS  D   P      Q+ NL  +  V+ G  H+  +  DG V  WG
Sbjct: 638 VWAWGDNNEGQLGDGSWMDRFAP-----VQVRNLTGITAVSGGRSHSLALHADGTVRAWG 692

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              YG LG G      +P V+  L+ ++A+H   G      +  D  +  +G      LG
Sbjct: 693 SNGYGQLGDGTLTSRVLPSVIPGLSGIQALH--PGHLHVLALHADKTLRGWGYNRFGQLG 750

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             A   G   R      P  V  + +V ER+            AH   +   G + A+GA
Sbjct: 751 LGAA--GWSAR------PVQVRGIGRV-ERLAAG--------RAHALLVRADGSVVAWGA 793

Query: 405 GDKGQLG 411
              GQLG
Sbjct: 794 NASGQLG 800



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 177/415 (42%), Gaps = 86/415 (20%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG   S+AV   G  +++G+N SGQLG G+ +    P  + S++G+R +  +AGA   M 
Sbjct: 974  AGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRAV--SAGAHHAMA 1031

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            + + G V+A+G ++ G+   G      V  PQ V  L ++  V A  G  F+  ++ +G 
Sbjct: 1032 LGEDGAVWAWGDNTLGQLGDGTS-AFTVMWPQRVAELSDVESVAA--GEQFSVAVAHDG- 1087

Query: 170  VYTFSWGN-------DARLGHHTEPNDVE----------------PHPLL----GTLEN- 201
               FSWG+       D + G    P +V+                 H +     GTL+  
Sbjct: 1088 -TAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAW 1146

Query: 202  -------------------------IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
                                       V  ++ G  + LAL    +   V++ G    G+
Sbjct: 1147 GDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDGT---VWAWGANGFGQ 1203

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
            LG G+ T    P  ++  + +    V +AAG +H+  V  DG V TWG+  +G LG G  
Sbjct: 1204 LGDGTTTARAVPVPVQGLRDV----VAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTS 1259

Query: 297  ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
            E  ++P  V  L  V+A  V  GD+ +  +  DG V  +G   S  LG  +  D    R+
Sbjct: 1260 ESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD----RY 1313

Query: 357  ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              V        LK V+       LT      AHT AL + G ++ +G    GQLG
Sbjct: 1314 TPV-------RLKDVD------GLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG 1355



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 171/379 (45%), Gaps = 46/379 (12%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H++A+ + G + ++G N++GQLG GTT     P  IR +   R+   + GA  ++ +   
Sbjct: 1133 HAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGV--TRVTAVSTGAWHSLALRLD 1190

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G V+A+G + FG+   G    + V  P  V+ L+++  + A  G + +  +  +G V+T+
Sbjct: 1191 GTVWAWGANGFGQLGDGTTTARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTW 1246

Query: 174  SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
             +    +LG  T  +   P   H L G      V  +  G  + LAL    +   V   G
Sbjct: 1247 GYNTFGQLGDGTSESRALPVQVHKLEG------VQAVTGGDHHSLALHADGT---VSGWG 1297

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
                G+LG GSRTD   P  ++    L      V AGA H   +G+DG V TWG   +G 
Sbjct: 1298 HNASGQLGDGSRTDRYTPVRLKDVDGLT----EVRAGAAHTVALGKDGTVWTWGDNAHGQ 1353

Query: 291  LGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            LG G        VPK V  L    AI    G + +F    +   +++G      LG   +
Sbjct: 1354 LGDGVTGPRMRLVPKPVSGLPAATAI--GAGAWHSFASGPEEGAFTWGRNSHGQLG---V 1408

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             D     +A    PQ +  L  +  +V+      S+       A+T+ G L ++G+   G
Sbjct: 1409 GD-----NAPRAEPQRMKLLSGL--KVIAGGADTSL-------AMTQEGVLMSWGSSLHG 1454

Query: 409  QLGIELVNNQTERGNPERV 427
             LG+ ++    +R +P RV
Sbjct: 1455 TLGLGVLG---QRASPGRV 1470



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 170/372 (45%), Gaps = 37/372 (9%)

Query: 44   ENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
            E   A+AG G  S+A+ S G V+++G+N+SGQ+G GT E+   PR I +L  + +I  A 
Sbjct: 867  EGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDVMVI--AL 924

Query: 103  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            G    + + + G V+A+G ++ G+   G +   L+  P  V+ L+ +  V A  G  F+ 
Sbjct: 925  GESHALAVGEDGTVWAWGANASGQLGDGGETPSLL--PARVKGLEGVGSVAA--GRAFSL 980

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
             +  +G  + +      +LG  +  +   PH  + +++ +  V  +AG  + +AL     
Sbjct: 981  AVRDDGTAWAWGANESGQLGDGSNQSRRVPH-RVASVKGLRAV--SAGAHHAMALGED-- 1035

Query: 223  GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              AV++ G    G+LG G+       P+ + +   +      VAAG   +  V  DG   
Sbjct: 1036 -GAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVE----SVAAGEQFSVAVAHDGTAF 1090

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS--EDGDVYSFGCGE 339
            +WG   YG LG G       P  V+         V  G +    V+   DG + ++G   
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  LG     DG   R +   +P  +         V +++  ++  W  H+ AL   G +
Sbjct: 1151 TGQLG-----DGTTTRRS---SPGEI-------RGVTRVTAVSTGAW--HSLALRLDGTV 1193

Query: 400  YAFGAGDKGQLG 411
            +A+GA   GQLG
Sbjct: 1194 WAWGANGFGQLG 1205



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 39/361 (10%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISD 112
           HS+A    G V+++G NS GQLG GT  E  R  P+R + G+  ++A A AG  ++ ++ 
Sbjct: 428 HSLAALEDGSVWAWGRNSYGQLGDGTVTE--RHVPVR-VPGLPSVRAVAAAGHHSIAVAM 484

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            G V+ +G+++ G+   G   T+    P  V  L ++  + A  G      L  +G V+ 
Sbjct: 485 DGTVWTWGRNAAGQLGDGT--TRDRARPVAVSGLTSVLAIAA--GGSHVLALRSDGDVWA 540

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           + +    +LG  T  + + P  + G     P+  +AAG  + +ALA   +   V++ G G
Sbjct: 541 WGYNALGQLGDGTSGDKLTPVRVPGL---APIQSVAAGTYFSMALANDGT---VWTWGEG 594

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G       P  ++    +      ++ G+ HA  V  DG V  WG    G LG
Sbjct: 595 FEGQLGDGGGVQRLSPVAVKGLSDIR----NISVGSAHALAVRGDGTVWAWGDNNEGQLG 650

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G+      P  V+ L  + A  V+ G   +  +  DG V ++G     S G+  + DG 
Sbjct: 651 DGSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHADGTVRAWG-----SNGYGQLGDG- 702

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIY-WNAHTFALTESGKLYAFGAGDKGQLG 411
                  LT +++ S+      +  +S   +++  + H  AL     L  +G    GQLG
Sbjct: 703 ------TLTSRVLPSV------IPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLG 750

Query: 412 I 412
           +
Sbjct: 751 L 751



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 179/459 (38%), Gaps = 129/459 (28%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H +A+ S G V+++G N+ GQLG GT+ ++  P  +  L  I+ +  AAG   +M 
Sbjct: 524 AGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSV--AAGTYFSMA 581

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +++ G V+ +G + F E + G  G     SP  V+ L +I  +  ++G+     +  +G 
Sbjct: 582 LANDGTVWTWG-EGF-EGQLGDGGGVQRLSPVAVKGLSDIRNI--SVGSAHALAVRGDGT 637

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N+ +LG  +  +   P      + N+  +  ++ G  + LAL    +  A  S
Sbjct: 638 VWAWGDNNEGQLGDGSWMDRFAPV----QVRNLTGITAVSGGRSHSLALHADGTVRAWGS 693

Query: 229 VGCGLGGKLGHGSRTDEKHPRLI------------------------------EQFQLLN 258
            G G   +LG G+ T    P +I                               +F  L 
Sbjct: 694 NGYG---QLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLG 750

Query: 259 L-------QPVVV---------AAGAWHAAVVGQDGRVCTWG------------------ 284
           L       +PV V         AAG  HA +V  DG V  WG                  
Sbjct: 751 LGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARA 810

Query: 285 ------------------------------WG--RYGCLGHGNEECESVPKVVQALNDVK 312
                                         WG  + G LG G       P  V+ L  + 
Sbjct: 811 VTVRGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGI- 869

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + VA G  T+  +  DG V+++G   S  +G   + D         LTP+ + +L    
Sbjct: 870 -VAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVED--------RLTPRRIEALSD-- 918

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             V+ I+L  S     H  A+ E G ++A+GA   GQLG
Sbjct: 919 --VMVIALGES-----HALAVGEDGTVWAWGANASGQLG 950



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 30/229 (13%)

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           E +  ++IAAG  + L L   P+G AV++ G    G+LG     D    RL    +L  L
Sbjct: 64  EPLSPMRIAAGAQHSLFL--TPTG-AVWAWGGNSAGQLGG---ADTSFQRL-SPARLPVL 116

Query: 260 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           + +V V +G  H+  +G DG V TWG    G LG G     + P+ V+   DV  + VA 
Sbjct: 117 EDIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDV--VAVAA 174

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           GD+ + V+  DG V+++G      LG      G        L P+ V  L+ V       
Sbjct: 175 GDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTG--------LWPKPVPGLEGVVALAAGF 226

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                      T A+   G + ++GA   GQLG+      T+R +PER+
Sbjct: 227 DF---------TLAVHADGAVSSWGANSFGQLGL---GTFTQRLSPERI 263



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 10/130 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 107
            AG  H++A+   G V+++G N+ GQLG G T    R  P+P+  L     I   AGA  +
Sbjct: 1329 AGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAI--GAGAWHS 1386

Query: 108  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
                     + +G++S G  + GV        PQ ++ L  + V+  A G   +  +++E
Sbjct: 1387 FASGPEEGAFTWGRNSHG--QLGVGDNAPRAEPQRMKLLSGLKVI--AGGADTSLAMTQE 1442

Query: 168  GRVYTFSWGN 177
            G +   SWG+
Sbjct: 1443 GVL--MSWGS 1450



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS A   +   +++G NS GQLG G       P+ ++ L G+++I  A GA  ++ 
Sbjct: 1381 AGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGLKVI--AGGADTSLA 1438

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTK 135
            ++  G + ++G    G    GV G +
Sbjct: 1439 MTQEGVLMSWGSSLHGTLGLGVLGQR 1464


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 179/384 (46%), Gaps = 35/384 (9%)

Query: 38  EACCR--RENSQAIAGP------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
           E  CR   + S+  A P      G +  V+    VY +GSNSS QL  GT E+  +P+  
Sbjct: 342 EEVCRMASDYSRTCASPDSIQTGGDAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLA 401

Query: 90  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
            S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I
Sbjct: 402 PSFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI 459

Query: 150 FVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
             V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++
Sbjct: 460 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 519

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
           AGY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+
Sbjct: 520 AGYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGS 572

Query: 269 WHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++
Sbjct: 573 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 632

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
             G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S    
Sbjct: 633 STGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS---- 677

Query: 388 AHTFALTESGKLYAFGAGDKGQLG 411
            H  AL+   ++YA+G    GQ G
Sbjct: 678 -HCLALSHDNEVYAWGNNSMGQCG 700



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 20/346 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4181

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4182 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4239

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P   +  LE   + ++A G  + L ++    G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPE-RVAALEGYQIGEVACGLNHTLVVSTD--G 4296

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G   +  + +DG V T+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4354

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V AL+ V    +A G   T  +S  GDVY++G      L
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQL 4414

Query: 344  GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G           H N V  P LVTSL+  + R +     +S  W++
Sbjct: 4415 GLG---------HTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSS 4451



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 406 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 463

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 464 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 521

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 522 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 578

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 579 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 634

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 635 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 692

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 693 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 737



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 30/361 (8%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G+   GQL          P      Q  ++I    G   T +I   G V A G+ S
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSPSFCQAQQVI---CGQNCTFVIQANGTVLACGEGS 4146

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDAR 180
            +G    G      V +  ++ +L+   V Q       +  +  L+  G V+++  G+  +
Sbjct: 4147 YGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH        P  +   L+   VVQ++ G+ +    A   +   +++ G G  G+LG G
Sbjct: 4205 LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLG 4260

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECE 299
            + +++K P  +   +    Q   VA G  H  VV  DG  V  +G G YG LG GN   +
Sbjct: 4261 NTSNKKLPERVAALE--GYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK 4318

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            S P+ V  L  +    VA G   +  +++DG VY+FG  +   +G   + +G+   H   
Sbjct: 4319 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRLIG---LPEGRARNHNR- 4372

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
              PQ V +L  V    + +          HT AL+ SG +YA+G+  +GQLG+   N+  
Sbjct: 4373 --PQQVPALSGVFVEDIAVG-------AEHTLALSASGDVYAWGSNSEGQLGLGHTNHVR 4423

Query: 420  E 420
            E
Sbjct: 4424 E 4424



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4220 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQI 4279

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             + A G   T+++S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4280 GEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4337

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + V  IA 
Sbjct: 4338 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALSGVFVEDIAV 4389

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LAL+   SG  VY+ G    G+LG G     + P L+   Q  +++   ++AG  
Sbjct: 4390 GAEHTLALSA--SG-DVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQ--ISAGRC 4444

Query: 270  HAA 272
            H+A
Sbjct: 4445 HSA 4447



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 26/207 (12%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4140 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4199

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4200 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4257

Query: 346  NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKL-YAF 402
                 G GN  +N   P+ V +L+  Q+ E    ++         HT  ++  G + +AF
Sbjct: 4258 -----GLGNT-SNKKLPERVAALEGYQIGEVACGLN---------HTLVVSTDGSMVWAF 4302

Query: 403  GAGDKGQLGIELVNNQTERGNPERVDI 429
            G GD G+LG+    N T + +P++VDI
Sbjct: 4303 GDGDYGKLGL---GNSTAKSSPQKVDI 4326



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 18/179 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 571 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 630

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 631 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 684

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P
Sbjct: 685 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALP 739


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 339 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 398

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 399 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 456

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 457 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 516

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 517 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 569

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 630 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 673

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 674 HCLALSHDNEVYAWGNNSMGQCG 696



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 402 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 459

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 460 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 517

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 518 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 575 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 630

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 631 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 688

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 689 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 29/345 (8%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3628

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 3629 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3686

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P             ++A G  + LA++    G
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSA--DG 3732

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 3733 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 3790

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 3791 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 3850

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 3851 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 3887



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 33/205 (16%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3587 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3646

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 3647 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 3704

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN           TS K++ ERV    L        HT A++  G + +AFG 
Sbjct: 3705 -----GLGN-----------TSNKKLPERVA-CGLN-------HTLAVSADGSMVWAFGD 3740

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 3741 GDYGKLGL---GNSTAKSSPQKVDV 3762



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 38/326 (11%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3626

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 3627 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3684

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P               VA G  H   V 
Sbjct: 3685 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER-------------VACGLNHTLAVS 3729

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 3730 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 3789

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT AL 
Sbjct: 3790 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 3834

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 3835 STGDVYAWGSNSEGQLGLGHTNHVRE 3860



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 567 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 626

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 627 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 680

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 681 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 736

Query: 223 GMAV 226
              V
Sbjct: 737 DRQV 740



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 34/243 (13%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P           
Sbjct: 3667 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE---------- 3716

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             + A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 3717 -RVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 3773

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     + +  +A 
Sbjct: 3774 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 3825

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 3826 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 3880

Query: 270  HAA 272
            H+A
Sbjct: 3881 HSA 3883


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
           africana]
          Length = 4858

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPLVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIR 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4087

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4088 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4145

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSS--DG 4202

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4260

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4321 GL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4357



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 30/353 (8%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS   IR +
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS---IRKV 460

Query: 99  QAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAI 156
            ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + 
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSA 518

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +A
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIA 575

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L+    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +  
Sbjct: 576 LS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTS 631

Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++
Sbjct: 632 TGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAW 689

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 690 G---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 143/281 (50%), Gaps = 16/281 (5%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
           R+ S +    GH++A T++G V+S+G    G+LGHG +  +  P+ I+  LQG  ++  +
Sbjct: 458 RKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V + + G+  T
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHT 573

Query: 162 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS++GR V++F  G++ +LGH  + N V    ++  L+ + + ++ AG    LAL   
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGH-GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT-- 630

Query: 221 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
            S   VY+ GCG    LG GS       P+LIE+     +  V ++ G  H   +  D  
Sbjct: 631 -STGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRI--VDISIGDSHCLALSHDNE 685

Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
           V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4126 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4185

Query: 98   IQAAAGAGRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ + SD   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4186 GQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4243

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4244 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4295

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4296 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4350

Query: 270  HAA 272
            H+A
Sbjct: 4351 HSA 4353



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4046 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4106 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4163

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4164 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSSDGSMVWAFGD 4210

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4211 GDYGKLGL---GNSTAKSSPQKVDV 4232



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4085

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4086 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4143

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4144 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4199

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4200 SDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4259

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4260 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4304

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4305 STGDVYAWGSNSEGQLGLGHTNHVRE 4330



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 170/352 (48%), Gaps = 24/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3238

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3239 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3296

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH
Sbjct: 3297 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3352

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                D+  P+L++  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3353 SDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3412

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VP  + +L  +  + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 3413 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3464

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V  L+   ++V+ I+ T S+    H    TE G  Y +G  D+GQLG
Sbjct: 3465 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGS-YTWGDNDEGQLG 3508



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
            A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2238

Query: 117  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
            YA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 2239 YACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2297

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 2298 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 2353

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
            G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 2354 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2411

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +     
Sbjct: 2412 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 2466

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2467 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2515



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 173/366 (47%), Gaps = 19/366 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3207 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3266

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 3267 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3324

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 3325 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVDALQGHRVVDVACGSGDAQ 3383

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 3384 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 3440

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG  Y++
Sbjct: 3441 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTW 3499

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 3500 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 3549

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 3550 AGKLPA 3555



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2218 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2277

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2278 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2334

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 2335 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2393

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2394 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2449

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 2450 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 2507



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2391

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 2392 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2449

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+        VY+
Sbjct: 2450 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DAGQVYA 2505

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGLE 2532



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3173 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT--- 3228

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 3229 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3288

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G   
Sbjct: 3289 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3348

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   +++
Sbjct: 3349 RLGHSDSEDQ--------LKPKLVDALQ--GHRVVDVACGSG---DAQTLCLTDDDTVWS 3395

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 3396 WGDGDYGKLG 3405



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2427 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2481

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 2482 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2539

Query: 155  AIGN 158
            A G+
Sbjct: 2540 ACGS 2543


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 153/305 (50%), Gaps = 13/305 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HSI +   G VY+ G N+ GQLGH    E  +P  I +L    II  A 
Sbjct: 35  RSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 92

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   ++ +SD GQ++++G  S G+  +       V  P+L++ L    ++Q + GN+   
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS-VAIPRLIKKLNQQMILQVSCGNWHCM 151

Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+ +G+ +T+      +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFPSQASPQR-VKSLEGIPLAQVAAGGAHSFALSL-- 208

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           SG AV+  G    G+LG    TD + P  +   +LL  Q VV ++ G  H AV+ + G V
Sbjct: 209 SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---KLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
            T+G G +G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG 
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 340 SASLG 344
              LG
Sbjct: 325 RGQLG 329



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +VT PQ    + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 22  IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 78

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ Q     ++S G G  G+LGH +  D    PRLI++ 
Sbjct: 79  IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG  R+G LG G E   ++ P+ V++L  + 
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D Q   H  +L  Q         
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ--------- 243

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 244 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---NPRRV 289



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 92

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS +G+++++  G+D +LGH T  + V    L+  L    ++Q++ G  + +A
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ ++  + + L    VAAG  H+  + 
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 268 GAGSFGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 312

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 313 SSGLIYAFGCGARGQLG 329



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLGH TTE+    PR I+ L    I+Q + G    M 
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++  G+   G +      SPQ V+SL+ I + Q A G   +  LS  G 
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPS-QASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211

Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N  +LG   E +   P H  L  L    VV I+ G  +   L    SG  V++
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 266

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
            G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G 
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 288 YGCLGHG---NEECESVPK 303
            G LG G   N +C S  K
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG     +   P  ++ L+  +++  + G  
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  SFG+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 311

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 312 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           W  G  G +    +   + P+    ++D     VA G   +  + EDG+VY+ G      
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQ 66

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH    + +GN+      P+ + +L   ++ ++ ++   S     H+ AL++ G+L+++
Sbjct: 67  LGH----EREGNK------PEQIGAL--ADQHIIHVACGES-----HSLALSDQGQLFSW 109

Query: 403 GAGDKGQLG 411
           GAG  GQLG
Sbjct: 110 GAGSDGQLG 118


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4019

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   V+Q + G   +AV
Sbjct: 4020 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQMSCGFKHSAV 4077

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4134

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4192

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    +A G   T  ++  GDVY++G      L
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQL 4252

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P L+T L+  N R +     +S  W A
Sbjct: 4253 GL-----GHTN---HVREPTLITILQGKNIRQISAGRCHSAAWTA 4289



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 63/363 (17%)

Query: 75  LGHGTTEEEWRPRPIRSLQGI------------RIIQAAAGAGRTM------------LI 110
           LG      +WR  P RS  G+             + + A+   RT             ++
Sbjct: 310 LGSSADRSQWR-EPTRSSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIV 368

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+S +G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSV 424

Query: 171 YTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
                G+  RLG     N         EPH    +++ +   + + G+     LA    G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TLAFTTEG 477

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +DG + TW
Sbjct: 478 -EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 342
           G G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG G++  
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +G++YA+
Sbjct: 594 LGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAW 638

Query: 403 GAG 405
           G G
Sbjct: 639 GCG 641



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4058 EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4117

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4118 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4175

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  IA 
Sbjct: 4176 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDIAV 4227

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG  
Sbjct: 4228 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQ--ISAGRC 4282

Query: 270  HAA 272
            H+A
Sbjct: 4283 HSA 4285



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3978 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4037

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + I ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4038 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4095

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4096 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4142

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4143 GDYGKLGL---GNSTAKSSPQKVDV 4164



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4017

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   V+Q++ G+ +  
Sbjct: 4018 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHS- 4075

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4076 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4131

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4132 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4191

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    + +          HT AL 
Sbjct: 4192 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDIAVG-------AEHTLALA 4236

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4237 STGDVYAWGSNSEGQLGLGHTNHVRE 4262



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
           garnettii]
          Length = 4828

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4057

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4058 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4115

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4172

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4230

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4291 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4327



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4096 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4155

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4156 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4213

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4214 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4265

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4266 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4320

Query: 270  HAA 272
            H+A
Sbjct: 4321 HSA 4323



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4016 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4075

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4076 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4133

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4134 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4180

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4181 GDYGKLGL---GNSTAKSSPQKVDV 4202



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4055

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4056 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4113

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4114 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4169

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4170 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4229

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4230 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4274

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4275 SNGDVYAWGSNSEGQLGLGHTNHVRE 4300



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 38/376 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V ++GS   GQLG GT EE+     + +L+   +     G+  ++ I D G+++ +G + 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK  ++P LV+SL ++ +VQAAIG +    +  +GR Y  +WG +     
Sbjct: 67  RGTLGHPPE-TKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123

Query: 184 HTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             EP+  E   P+   +         + V Q+AAG  + + L  +     V++     G 
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
               G       P  ++  + + L    +A GA+H   + +DG +  WG   YG LG G+
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +  S P  VQ L+D+  + +A G + +  ++ +G+VY +G GE   LG         N 
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD------ND 286

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            ++ + PQ V  L    E ++Q+S   +     H+ ALT  G++++FG GD G+LG    
Sbjct: 287 KSSKMLPQKVNLL--AGEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG---Y 336

Query: 416 NNQTERGNPERVDIDL 431
             +   G P  + ID+
Sbjct: 337 GRKVTTGQPLELPIDI 352



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 32/311 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + G  +S+A+   G ++++G N  G LGH   T+ E  P  ++SL  ++I+QAA G    
Sbjct: 44  VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + + D G+ YA+G + +G+        E G    + +  P+       + V Q A G   
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAPQLTVRQVAAGGTH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
           + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A       
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISIPVRVQG-LENVRLIAVGA----FHN 208

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA +  G  +++ G    G+LG G       P  ++    L L  V +AAG WH+  +  
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTL--VDIAAGGWHSTALTN 265

Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           +G V  WG G +G LG G+ +  S  +P+ V  L     I V+ G   +  ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325

Query: 335 FGCGESASLGH 345
           FG G+   LG+
Sbjct: 326 FGRGDHGRLGY 336



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+   G ++++G+N  GQLG G T+    P P++ L  + ++  AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAA 255

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  +++ G+VY +G+   G   +G         PQ V  L    ++Q + G   + 
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR+++F  G+  RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 179/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  V+ + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q + G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + +A++    G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST--DG 4204

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKK--VACGTQFSVALTKDGHVYTF 4262

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L+ V    +A G   T  +S  GDVY++G      L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P L+T L+  N R +     +S  W A
Sbjct: 4323 GL-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWTA 4359



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4188 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4245

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + +  IA 
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDIAV 4297

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LAL+   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG  
Sbjct: 4298 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4352

Query: 270  HAA 272
            H+A
Sbjct: 4353 HSA 4355



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4165

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGD 4212

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VDI
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDI 4234



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 30/361 (8%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            VY +G+   GQL            P+ +    +  Q   G   T +I   G V A G+ S
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVM---VPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4054

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDAR 180
            +G    G      V +  ++ +L+   V Q       +  +  L+  G V+++  G+  +
Sbjct: 4055 YGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH        P  +   L+   VVQ++ G+ +    A   +   +++ G G  G+LG G
Sbjct: 4113 LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLG 4168

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECE 299
            + +++K P  +   +    Q   VA G  H   V  DG  V  +G G YG LG GN   +
Sbjct: 4169 NTSNKKLPERVTALE--GYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4226

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            S P+ V  L  +    VA G   +  +++DG VY+F  G+   +G   + +G+   H   
Sbjct: 4227 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIG---LPEGRARNHNR- 4280

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
              PQ V  L  V    + +          HT AL+ +G +YA+G+  +GQLG+   N+  
Sbjct: 4281 --PQQVPVLSGVFIEDIAVG-------AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVR 4331

Query: 420  E 420
            E
Sbjct: 4332 E 4332



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVSIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
           paniscus]
          Length = 4798

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4027

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4028 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4085

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4142

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4200

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4260

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4261 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4297



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4066 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4125

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4126 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4183

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4184 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4235

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4236 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4290

Query: 270  HAA 272
            H+A
Sbjct: 4291 HSA 4293



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3986 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4045

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4046 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4103

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4104 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4150

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4151 GDYGKLGL---GNSTAKSSPQKIDV 4172



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4025

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4026 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4083

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4084 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4139

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4140 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4199

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4200 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4244

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4245 SNGDVYAWGSNSEGQLGLGHTNHVRE 4270



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Pongo abelii]
          Length = 4864

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4093

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4094 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4208

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4266

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4327 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4363



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4191

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4192 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4249

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   PLL     + +  +A 
Sbjct: 4250 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PLLA---GVIIEDVAV 4301

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4302 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4356

Query: 270  HAA 272
            H+A
Sbjct: 4357 HSA 4359



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4169

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4170 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4216

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4217 GDYGKLGL---GNSTAKSSPQKIDV 4238



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4091

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4149

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4150 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4205

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4206 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4266 F--GQDRLIG---LPEGRARNHNR---PQQIPLLAGVIIEDVAVG-------AEHTLALA 4310

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4311 SNGDVYAWGSNSEGQLGLGHTNHVRE 4336



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G YG LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV---NPRRV 288



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA   S    ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSYGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ S G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S+G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    CR    R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G  + G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT AL   SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A+V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G  + G        +P+ V  L    V Q A G   T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 162/345 (46%), Gaps = 23/345 (6%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G        S +     +   VVQ + G   +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG-------NSDRQRRPXQGEEVVQMSCGFKHSAV 4142

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4199

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4257

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4317

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4318 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4354



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 32/326 (9%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH    +D +  P  G      VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN--SDRQRRPXQGE----EVVQMSCGFKHS- 4140

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4141 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4196

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4197 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4256

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4257 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4301

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4302 SNGDVYAWGSNSEGQLGLGHTNHVRE 4327



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 125/279 (44%), Gaps = 44/279 (15%)

Query: 141  QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
            QL E+ +N+ V  AA           G   T V+   G V     G+  RLG     +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066

Query: 191  EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
                ++  L+   V Q+       G+    ++A   SG  V+S G G  GKLGHG+   +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121

Query: 246  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
            + P   E+        V ++ G  H+AVV  DG++ T+G G YG LG GN   + +P+ V
Sbjct: 4122 RRPXQGEEV-------VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4174

Query: 306  QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
             AL   +   VA G   T  VS DG  V++FG G+   L       G GN  A   +PQ 
Sbjct: 4175 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL-------GLGNSTAKS-SPQK 4226

Query: 365  VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
            +  L  +  + V      S+       ALT+ G +Y FG
Sbjct: 4227 IDVLCGIGIKKVACGTQFSV-------ALTKDGHVYTFG 4258


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
           mulatta]
          Length = 4824

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4053

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4054 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4111

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4168

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4226

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4286

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4287 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4323



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4092 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4151

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4152 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4209

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4210 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4261

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4262 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4316

Query: 270  HAA 272
            H+A
Sbjct: 4317 HSA 4319



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4012 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4072 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4129

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4130 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4176

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4177 GDYGKLGL---GNSTAKSSPQKIDV 4198



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4051

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4052 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4109

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4110 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4165

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4166 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4225

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4226 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4270

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4271 SNGDVYAWGSNSEGQLGLGHTNHVRE 4296



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--VREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G YG LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT      
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG
Sbjct: 64  GQLGHVREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117

Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
             +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKE 174

Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
              ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +   
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSM 279

Query: 416 NNQTERGNPERV 427
           N++    NP RV
Sbjct: 280 NDEV---NPRRV 288



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA   S    ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSYGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ S G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S+G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
           boliviensis boliviensis]
          Length = 4860

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4204

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4323 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4359



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4188 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4297

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4352

Query: 270  HAA 272
            H+A
Sbjct: 4353 HSA 4355



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 276  QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG V   +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4306

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G  ++AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4212

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
          Length = 4861

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 35/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V ++GS   GQLG GT EE+     + +L+   +     G+  ++ I D G+++ +G + 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK  ++P LV+SL N+ +VQAAIG +    +  +GR Y  +WG +     
Sbjct: 67  RGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123

Query: 184 HTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             EP+  E   P+   +       + + V Q+AAG  + + L  +     V++     G 
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
               G       P  ++  + + L    +A GA+H   + +DG +  WG   YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +  S P  VQ L+D+  + +A G + +  ++ +G+VY +G GE   LG         N 
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD------ND 286

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++ + PQ V  L    E ++Q+S   +     H+ ALT  G++++FG GD G+LG
Sbjct: 287 KSSKMLPQKVNLL--AGEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 32/311 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + G  +S+A+   G ++++G N  G LGH   T+ E  P  ++SL  ++I+QAA G    
Sbjct: 44  VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + + D G+ YA+G + +G+        E G    + +  P+     + + V Q A G   
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
           + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A       
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA +  G  +++ G    G+LG G      +P  ++    L L  V +AAG WH+  +  
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 265

Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           +G V  WG G +G LG G+ +  S  +P+ V  L     I V+ G   +  ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325

Query: 335 FGCGESASLGH 345
           FG G+   LG+
Sbjct: 326 FGRGDHGRLGY 336



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 27/267 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPR------PIRSLQGIRIIQ 99
           QA  G  H +AV  +G  Y++G N  GQ G   +++E  RP       P R  Q + + Q
Sbjct: 95  QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQ 154

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            AAG   +++++  G V+ +G+       +     K ++ P  V+ L+N+ ++  A+G F
Sbjct: 155 VAAGGTHSVVLTREGYVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGAF 206

Query: 160 FTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
               L  +G ++  +WGN+   +LG   T+P    P P+ G L+++ +V IAAG  +  A
Sbjct: 207 HNLALKEDGTLW--AWGNNEYGQLGTGDTQPRSY-PIPVQG-LDDLTLVDIAAGGWHSTA 262

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L  +     VY  G G  G+LG G   D+    L ++  LL  + ++ V+ G  H+  + 
Sbjct: 263 LTNEGE---VYGWGRGEHGRLGFGD-NDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALT 318

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP 302
           +DGR+ ++G G +G LG+G +     P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+   G ++++G+N  GQLG G T+    P P++ L  + ++  AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  +++ G+VY +G+   G   +G         PQ V  L    ++Q + G   + 
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR+++F  G+  RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG G  G LG G +E + +  VV AL       V  G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             +LGH      +        TP LV SL  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSLVKSLANV--KIVQAAIGG---W--HCLAVDDQGRA 112

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           YA+G  + GQ G E   ++T  G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
           gorilla gorilla]
          Length = 4502

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3731

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 3732 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3789

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 3846

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 3904

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P +VT L+  N R +     +S  W A
Sbjct: 3965 GL-----GHTN---HVREPTVVTGLQGKNVRQISAGRCHSAAWTA 4001



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 3770 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3829

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 3830 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 3887

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 3888 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 3939

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P ++   Q  N++   ++AG  
Sbjct: 3940 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQ--ISAGRC 3994

Query: 270  HAA 272
            H+A
Sbjct: 3995 HSA 3997



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3690 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 3750 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 3807

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 3808 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 3854

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 3855 GDYGKLGL---GNSTAKSSPQKIDV 3876



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3729

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 3730 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3787

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 3788 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 3843

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 3844 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 3903

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 3904 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 3948

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 3949 SNGDVYAWGSNSEGQLGLGHTNHVRE 3974



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 18/179 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALP 737


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
           [Callithrix jacchus]
          Length = 4860

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4204

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4323 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4359



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4188 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     + +  +A 
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4297

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4352

Query: 270  HAA 272
            H+A
Sbjct: 4353 HSA 4355



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4212

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 4306

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    CR    R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G  + G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT AL   SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A+V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G  + G        +P+ V  L    V Q A G   T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4190

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4248

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4308

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4309 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4345



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4173

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4174 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4231

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4232 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4283

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4284 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4338

Query: 270  HAA 272
            H+A
Sbjct: 4339 HSA 4341



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4151

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4152 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4198

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4199 GDYGKLGL---GNSTAKSSPQKIDV 4220



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4073

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4132 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4187

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4188 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4292

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4293 SNGDVYAWGSNSEGQLGLGHTNHVRE 4318



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    CR    R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G  + G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT AL   SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A+V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G  + G        +P+ V  L    V Q A G   T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 24/364 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S  +V S+G    GQLGHG  E+   P  + +L   +I+    GA  T+ 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVA 81

Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S++  +VY++G   FG   +G   + L T P  +++L  I + Q A G+     ++ EG
Sbjct: 82  YSESRMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG     + + P  +    E I +  +AAG  +  A+        +Y 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +       +   +VA G  H   V   G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP  ++AL +     ++ G   T  ++ DG +Y +G  +   +     
Sbjct: 254 GQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G GN   N+     V      +++VVQ+S      W  HT A+TE   ++A+G G  G
Sbjct: 309 --GVGN---NLDQCSPVQVRIPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358

Query: 409 QLGI 412
           QLGI
Sbjct: 359 QLGI 362



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 162/336 (48%), Gaps = 29/336 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L +  +V   
Sbjct: 16  RVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDDHQIVSVT 73

Query: 156 IGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            G   T   S E R  VY++ WG+  RLGH    +   P P+   L  I + QIA G  +
Sbjct: 74  CGADHTVAYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSH 131

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A 
Sbjct: 132 CLAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAA 186

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           V +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALY 246

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G  +   LGH  + D         L P  + +L   N  + QIS      W  HT AL
Sbjct: 247 TYGWSKYGQLGHGDLEDH--------LVPHKLEALG--NSVISQISGG----WR-HTMAL 291

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           T  GKLY +G    GQ+G   V N  ++ +P +V I
Sbjct: 292 TSDGKLYGWGWNKFGQVG---VGNNLDQCSPVQVRI 324



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 10/264 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +G V S+G N +GQLG G TE+   P+ I++ +GIRI   AAGA  
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  +LV  P+ V S     +   A G   T  +S 
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH L   L N  + QI+ G+ + +AL    S   +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHKLE-ALGNSVISQISGGWRHTMALT---SDGKL 297

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           Y  G    G++G G+  D+  P    Q ++ + Q VV  +  W H   V +   V  WG 
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354

Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
           G  G LG G     + PK+++AL+
Sbjct: 355 GTNGQLGIGESLDRNFPKIIEALS 378



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  H++A+TS G +Y +G N  GQ+G G   ++  P  +R     +++Q + G  
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWR 338

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
            T+ +++   V+A+G+ + G  + G+  +     P+++E+L
Sbjct: 339 HTLAVTERNNVFAWGRGTNG--QLGIGESLDRNFPKIIEAL 377


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4197

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4255

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4315

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4316 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4352



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4180

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4181 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4238

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4239 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4290

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4291 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4345

Query: 270  HAA 272
            H+A
Sbjct: 4346 HSA 4348



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4158

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4159 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4205

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4206 GDYGKLGL---GNSTAKSSPQKIDV 4227



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4080

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4138

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4139 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4194

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4195 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4255 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4299

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4300 SNGDVYAWGSNSEGQLGLGHTNHVRE 4325



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Pan troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVD--G 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4198

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4256

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4317 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4353



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4181

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4182 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4239

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4240 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4291

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4292 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4346

Query: 270  HAA 272
            H+A
Sbjct: 4347 HSA 4349



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4159

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4160 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4206

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4207 GDYGKLGL---GNSTAKSSPQKIDV 4228



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4081

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4139

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4140 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4195

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4196 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4256 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4300

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4301 SNGDVYAWGSNSEGQLGLGHTNHVRE 4326



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 27/334 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  +AGA  ++ +     +  +G+   G+  +G    +LV  P ++       +     
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73

Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + Q+A G  + L
Sbjct: 74  GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A+        V S G    G+LG G+  D   P+ I+ F+ ++++  ++AAGA H A V 
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG +  WGWGRYG LG G+     VP+ V ++   K + VA G   T  VS  G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH    D         L P  V +LK  +    QIS      W  HT ALT 
Sbjct: 248 GWSKYGQLGHGDFEDH--------LVPHKVEALK--DSSTSQISGG----WR-HTMALTS 292

Query: 396 SGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            GKLY +G    GQ+G     +  +  +P +V+ 
Sbjct: 293 DGKLYGWGWNKFGQVG---AGDNADHCSPAQVNF 323



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 9/302 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ +  V+ ++G    GQLGHG  E+   P  I       I     GA  T  
Sbjct: 21  AGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTA 80

Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S D  QVY++G   FG   +G   +  V +PQ V++L+ I + Q A G+     ++  G
Sbjct: 81  YSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAG 138

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V ++    + +LG  T  + + P  +    E I V  IAAG  +  A+        +Y 
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISVKMIAAGAEHTAAVTEDGD---IYG 194

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G R D   P  +   +   +  V+VA G  H   V   G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLVACGWRHTITVSSSGSLYTYGWSKY 252

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+ E   VP  V+AL D     ++ G   T  ++ DG +Y +G  +   +G    
Sbjct: 253 GQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312

Query: 349 AD 350
           AD
Sbjct: 313 AD 314



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 138/276 (50%), Gaps = 11/276 (3%)

Query: 46  SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +  I G  H+ A +  +  VYS+G    G+LGHG + + + P+P+++LQGI+I Q A G 
Sbjct: 69  TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGD 128

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++ AG+V ++G++  G+   G     L+  PQ +++ + I V   A G   TA +
Sbjct: 129 SHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTIQAFEGISVKMIAAGAEHTAAV 186

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +Y + WG    LG     +   P  +  ++E   +V +A G+ + + ++   S  
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKV-SSVEGDKMVLVACGWRHTITVS---SSG 242

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
           ++Y+ G    G+LGHG   D   P  +E  +  +   +   +G W H   +  DG++  W
Sbjct: 243 SLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 299

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           GW ++G +G G+      P  V    + K   VA G
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACG 335



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 9/223 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT  G V S+G N +GQLG GTTE+   P+ I++ +GI +   AAGA  
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  +++ G +Y +G   +G    G +  + V  P+ V S++   +V  A G   T  +S 
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSS 240

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G +YT+ W    +LGH    + + PH +   L++    QI+ G+ + +AL    S   +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 296

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           Y  G    G++G G   D   P    Q      Q V   A  W
Sbjct: 297 YGWGWNKFGQVGAGDNADHCSP---AQVNFPEEQKVAQVACGW 336


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 177/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG            G G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCGACL---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 179/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  V+ + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q + G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3563

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 3564 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3621

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + +A++    G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSM--DG 3678

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKK--VACGTQFSVALTKDGHVYTF 3736

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ V  L+ V    +A G   T  +S  GDVY++G      L
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 3796

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P L+T L+  N R +     +S  W A
Sbjct: 3797 GL-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWTA 3833



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 3602 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3661

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 3662 GQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 3719

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + +  IA 
Sbjct: 3720 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDIAV 3771

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LAL+   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG  
Sbjct: 3772 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 3826

Query: 270  HAA 272
            H+A
Sbjct: 3827 HSA 3829



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 30/361 (8%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            VY +G+   GQL            P+ +    +  Q   G   T +I   G V A G+ S
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVM---VPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 3528

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDAR 180
            +G    G      V +  ++ +L+   V Q       +  +  L+  G V+++  G+  +
Sbjct: 3529 YGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3586

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH        P  +   L+   VVQ++ G+ +    A   +   +++ G G  G+LG G
Sbjct: 3587 LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLG 3642

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECE 299
            + +++K P  +   +    Q   VA G  H   V  DG  V  +G G YG LG GN   +
Sbjct: 3643 NTSNKKLPERVTALE--GYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK 3700

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            S P+ V  L  +    VA G   +  +++DG VY+F  G+   +G   + +G+   H   
Sbjct: 3701 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIG---LPEGRARNHNR- 3754

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
              PQ V  L  V    + +          HT AL+ +G +YA+G+  +GQLG+   N+  
Sbjct: 3755 --PQQVPVLSGVFIEDIAVG-------AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVR 3805

Query: 420  E 420
            E
Sbjct: 3806 E 3806



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3522 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3581

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 3582 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 3639

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 3640 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSMDGSMVWAFGD 3686

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VDI
Sbjct: 3687 GDYGKLGL---GNSTAKSSPQKVDI 3708



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 18/179 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +  VY  +WGN++      G+ T P   +P  + G L+ + + QI+AG  + LA    P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVSIQQISAGTSHSLAWTALP 737


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4198

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4256

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4317 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4353



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4181

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4182 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4239

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4240 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4291

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4292 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4346

Query: 270  HAA 272
            H+A
Sbjct: 4347 HSA 4349



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4159

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4160 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4206

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4207 GDYGKLGL---GNSTAKSSPQKIDV 4228



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4081

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4139

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4140 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4195

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4196 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4256 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4300

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4301 SNGDVYAWGSNSEGQLGLGHTNHVRE 4326



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 176/362 (48%), Gaps = 35/362 (9%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + S   V ++GS   GQLG GT EE+     + +L+   +     G+  ++ I D G+++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLF 60

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +  G   +  + TK  ++P LV+SL N+ +VQAAIG +    +  +GR Y  +WG 
Sbjct: 61  TWGWNQRGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAY--AWGG 117

Query: 178 DARLGHHTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +       EP+  E   P+   +       + + V Q+AAG  + + L  +     V++ 
Sbjct: 118 NEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWT- 173

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
               G     G       P  ++  + + L    +A GA+H   + +DG +  WG   YG
Sbjct: 174 ---WGQPWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G+ +  S P  VQ L+D+  + +A G + +  ++ +G+VY +G GE   LG     
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD-- 284

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               N  ++ + PQ V  L    E ++Q+S   +     H+ ALT  G++++FG GD G+
Sbjct: 285 ----NDKSSKMLPQKVNLLP--GEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGR 333

Query: 410 LG 411
           LG
Sbjct: 334 LG 335



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 32/311 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + G  +S+A+   G ++++G N  G LGH   T+ E  P  ++SL  ++I+QAA GA   
Sbjct: 44  VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + + D G+ YA+G + +G+        E G    + +  P+     + + V Q A G   
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
           + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A       
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA +  G  +++ G    G+LG G      +P  ++    L L  V +AAG WH+  +  
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 265

Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           +G V  WG G +G LG G+ +  S  +P+ V  L     I V+ G   +  ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFS 325

Query: 335 FGCGESASLGH 345
           FG G+   LG+
Sbjct: 326 FGRGDHGRLGY 336



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+   G ++++G+N  GQLG G T+    P P++ L  + ++  AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  +++ G+VY +G+   G   +G         PQ V  L    ++Q + G   + 
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSV 315

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR+++F  G+  RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG G  G LG G +E + +  VV AL       V  G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             +LGH      +        TP LV SL  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSLVKSLANV--KIVQAAIG---AW--HCLAVDDQGRA 112

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           YA+G  + GQ G E   ++T  G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNIRQISAGRCHSAAWTA 4360



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  FSWG +   +LG   + N      L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+++G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFSWGQNKYGQLGLGIDCNK-QASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+S G    G+LG G   +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFSWGQNKYGQLGLGIDCN 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   L  +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+S+G N  GQLG G    +
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNIRQISAGRCHSAAWTA 4360



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ ++D 
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDK 102

Query: 114 GQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           GQVYA+G DS  + + G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   V+ 
Sbjct: 103 GQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 230
           +      +LG   +        L+ +L  IP +Q+AAG  + ++L L+      A++  G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG     D   P L++   L + + V +  G  H A + ++G V T+G G YG 
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG  + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333

Query: 350 D 350
           +
Sbjct: 334 N 334



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+         ++ + P+
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST--------SHEINPR 286

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
            V  L  +   V Q++         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 287 KVFEL--MGSIVTQVACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202

Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  +L+   ++YA+G    GQ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4322 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351

Query: 270  HAA 272
            H+A
Sbjct: 4352 HSA 4354



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    CR    R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT AL   SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A+V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+   G        +P+ V  L    V Q A G   T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    CR    R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT AL   SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A+V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+   G        +P+ V  L    V Q A G   T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Cricetulus griseus]
          Length = 4859

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  +L+   ++YA+G    GQ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4322 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351

Query: 270  HAA 272
            H+A
Sbjct: 4352 HSA 4354



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 143/278 (51%), Gaps = 12/278 (4%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+ FG    GQLG G+TE+ + PR ++ L+   ++  AAGA  T  ++  G++Y  G + 
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
             E++ GV+      +P  V +L+   V + A G   T  +   G V  F      ++G 
Sbjct: 62  --ESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
                 VE   ++  L ++ +V++AAG  + LAL+   S   V+S G G  G LG G+  
Sbjct: 120 GPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALS---STGGVFSCGNGSFGALGRGTTE 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-----GHGNEEC 298
               PR I +   L +  V +A G  H+A +  DGRV TWG G++  L     GHG+ E 
Sbjct: 177 GNDVPRPISRLWPLGV--VQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN 234

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            S PK VQAL  +    V+ GD  T +++EDG VY++G
Sbjct: 235 CSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 19/290 (6%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V+ FG+   G+   G   T+ V  P+LV+ LK+  VV  A G   TA ++ +G +Y   
Sbjct: 1   EVWVFGRGDMGQ--LGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
              +++LG     + + P  +   LE   V ++A G  + LA+     G AV + G    
Sbjct: 59  SNEESQLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVV---DGGAVAAFGSAEY 114

Query: 235 GKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           G++G G      + PR+++  + +++  V VAAG  H   +   G V + G G +G LG 
Sbjct: 115 GQVGLGPCGARVELPRVVKDLRSMHI--VRVAAGGSHTLALSSTGGVFSCGNGSFGALGR 172

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G  E   VP+ +  L  +  + +A G+  +  ++ DG V ++G G+   L   A   G G
Sbjct: 173 GTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLL--PAFHCGHG 230

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           +   N  TP+ V +LK +  R  Q+S  +      HT  LTE G +YA+G
Sbjct: 231 D-FENCSTPKPVQALKGIVGR--QVSCGDD-----HTVLLTEDGSVYAWG 272



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 119/249 (47%), Gaps = 16/249 (6%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R+     AG  H+ AVTS G +Y  GSN   QLG     +   P  + +L+  ++ + A 
Sbjct: 33  RDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRVTALEQFQVQRVAC 92

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T+ + D G V AFG   +G+   G  G + V  P++V+ L+++ +V+ A G   T 
Sbjct: 93  GPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGAR-VELPRVVKDLRSMHIVRVAAGGSHTL 151

Query: 163 VLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G V++   G+   LG   TE NDV P P +  L  + VVQIA G  +  A+    
Sbjct: 152 ALSSTGGVFSCGNGSFGALGRGTTEGNDV-PRP-ISRLWPLGVVQIACGENHSAAITADG 209

Query: 222 SGMAVYSVGCGLGGKL-----GHGSRTDEKHPRLIEQFQ-LLNLQPVVVAAGAWHAAVVG 275
               V + G G    L     GHG   +   P+ ++  + ++  Q   V+ G  H  ++ 
Sbjct: 210 R---VLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQ---VSCGDDHTVLLT 263

Query: 276 QDGRVCTWG 284
           +DG V  WG
Sbjct: 264 EDGSVYAWG 272



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  +G G  G LG G+ E   VP++V+ L     +++A G   T  V+ DG++Y  G  E
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            + LG          + ++ L P  VT+L+Q   + V           AHT A+ + G +
Sbjct: 62  ESQLGVR--------QRSDALAPTRVTALEQFQVQRVACG-------PAHTLAVVDGGAV 106

Query: 400 YAFGAGDKGQLGI 412
            AFG+ + GQ+G+
Sbjct: 107 AAFGSAEYGQVGL 119



 Score = 38.1 bits (87), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 18/97 (18%)

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           +V+ FG G+   LG  +  D        V  P+LV  LK  +       + N      HT
Sbjct: 1   EVWVFGRGDMGQLGDGSTED--------VFVPRLVKGLKSRD-------VVNLAAGALHT 45

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            A+T  G+LY  G+ ++ QLG   V  +++   P RV
Sbjct: 46  AAVTSDGELYVMGSNEESQLG---VRQRSDALAPTRV 79


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  +L+   ++YA+G    GQ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4099

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4100 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4214

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4272

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4333 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4369



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4197

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4198 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4255

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4256 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4307

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4308 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4362

Query: 270  HAA 272
            H+A
Sbjct: 4363 HSA 4365



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4175

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4176 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4222

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4223 GDYGKLGL---GNSTAKSSPQKVDV 4244



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4097

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4155

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4156 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4211

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4212 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4272 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4316

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4317 STGDVYAWGSNSEGQLGLGHTNHVRE 4342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  +L+   ++YA+G    GQ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4322 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351

Query: 270  HAA 272
            H+A
Sbjct: 4352 HSA 4354



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ ++D 
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDK 102

Query: 114 GQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           GQVYA+G DS  + + G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   V+ 
Sbjct: 103 GQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 230
           +      +LG   E        L+ +L  IP +Q+AAG  + ++L L+      A++  G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG     D   P L++   L + + V +  G  H A + ++G V T+G G YG 
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG  + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333

Query: 350 D 350
           +
Sbjct: 334 N 334



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 174/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+         ++ + P+
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST--------SHEINPR 286

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
            V  L  +   V QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 287 KVFEL--MGSIVTQIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G++  K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    CR    R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+  R +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + 
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    +
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
           +Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L    
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 381 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                   HT AL   SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A+V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+   G        +P+ V  L    V Q A G   T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  +L+   ++YA+G    GQ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4322 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351

Query: 270  HAA 272
            H+A
Sbjct: 4352 HSA 4354



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 12/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  VT  G +Y FGSN  GQLG G T+   +P  ++ L+  ++ + A G   T++ 
Sbjct: 46  GDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVY 105

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S++G++++FG +  G+  +  +  +L+  P+ +ES+  + + Q A G + + +LS +G V
Sbjct: 106 SESGKLFSFGCNEDGQLGHVDKENELL--PKEIESIPQMEIKQIACGTYHSIILSEDGDV 163

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           Y +   N+ +LG   E  +  P  L    E   VV ++ GY Y  AL  +   +  Y+ G
Sbjct: 164 YVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGY-YHTALVTRDGFL--YTFG 217

Query: 231 CGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
               GKLG  S   ++   P+ +      N + + V+ GA H   + + G    WG G  
Sbjct: 218 ENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQ 276

Query: 289 GCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G LGHG +  E + PK ++ L+  K I V+ G+  T VV+E G V++FG G    LG
Sbjct: 277 GQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLG 333



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 14/296 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+I  +  G ++SFG N  GQLGH   E E  P+ I S+  + I Q A G   ++++
Sbjct: 98  GRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIIL 157

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S+ G VY +G ++ G+   G +    +  P+ ++  K   VV  + G + TA+++R+G +
Sbjct: 158 SEDGDVYVWGNNNEGQLGLGEEVENSL--PKKLKFKKE--VVSVSCGYYHTALVTRDGFL 213

Query: 171 YTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           YTF      +LG  +    N   P  +    +N   + ++ G  + +A+  Q      Y+
Sbjct: 214 YTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQG---HCYA 270

Query: 229 VGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G G  G+LGHG++  E   P+ I+  +L   + + V+ G  H AVV + G+V T+G GR
Sbjct: 271 WGDGSQGQLGHGTKLLEVNEPKQIK--KLSGQKCISVSCGESHTAVVTESGKVFTFGDGR 328

Query: 288 YGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           +G LG G +   +   P  +   N    ++V+ G   T V++   +   F  GE++
Sbjct: 329 HGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDGENS 384



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 44/308 (14%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I D G V+ FGK  F +        K          +KN  VV+ A G+  +AV++  GR
Sbjct: 11  IPDLGAVFTFGKSKFADN----IANKFW--------IKNDGVVEMACGDEHSAVVTESGR 58

Query: 170 VYTF---SWGNDARLGHH---TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +Y F    WG    LGH     +P+ V+P      L+   V ++A G  + +  +   SG
Sbjct: 59  LYVFGSNDWGQ-LGLGHTKSLNKPSFVKP------LKPEKVRKVACGRNHTIVYS--ESG 109

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             ++S GC   G+LGH  + +E  P+ IE    + ++ +  A G +H+ ++ +DG V  W
Sbjct: 110 -KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQI--ACGTYHSIILSEDGDVYVW 166

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G    G LG G E   S+PK ++   +V  + V+ G Y T +V+ DG +Y+FG  E   L
Sbjct: 167 GNNNEGQLGLGEEVENSLPKKLKFKKEV--VSVSCGYYHTALVTRDGFLYTFGENELGKL 224

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G ++      ++ +N   PQ V ++   N+  + +S         HT A+T+ G  YA+G
Sbjct: 225 GLSS------SQLSNTTVPQSV-AMPADNDEYISVSC-----GARHTVAITKQGHCYAWG 272

Query: 404 AGDKGQLG 411
            G +GQLG
Sbjct: 273 DGSQGQLG 280



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           +  +F + N   V +A G  H+AVV + GR+  +G   +G LG G+ +  + P  V+ L 
Sbjct: 29  IANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK 88

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
             K   VA G   T V SE G ++SFGC E   LGH    D +     N L P+ + S+ 
Sbjct: 89  PEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGH---VDKE-----NELLPKEIESIP 140

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           Q+   + QI+     Y   H+  L+E G +Y +G  ++GQLG+
Sbjct: 141 QM--EIKQIAC--GTY---HSIILSEDGDVYVWGNNNEGQLGL 176



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 28/250 (11%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           E+  + E  Q   G  HSI ++  G VY +G+N+ GQLG G   E   P+ ++  +   +
Sbjct: 137 ESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EV 194

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVE-SLKNIFVVQA 154
           +  + G   T L++  G +Y FG++  G  + G+  ++L   T PQ V     N   +  
Sbjct: 195 VSVSCGYYHTALVTRDGFLYTFGENELG--KLGLSSSQLSNTTVPQSVAMPADNDEYISV 252

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           + G   T  ++++G  Y +  G+  +LGH T+        LL   E   + +++   C  
Sbjct: 253 SCGARHTVAITKQGHCYAWGDGSQGQLGHGTK--------LLEVNEPKQIKKLSGQKC-- 302

Query: 215 LALACQPSGMA-------VYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVA 265
           ++++C  S  A       V++ G G  GKLG G  S ++   P  + +F   N+  V V+
Sbjct: 303 ISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNV--VYVS 360

Query: 266 AGAWHAAVVG 275
            G  H  V+ 
Sbjct: 361 CGGCHTLVLA 370



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           ++N  VV++A G  +   +    SG  +Y  G    G+LG G       P  ++  +   
Sbjct: 35  IKNDGVVEMACGDEHSAVVT--ESGR-LYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK 91

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           ++ V  A G  H  V  + G++ ++G    G LGH ++E E +PK ++++  ++   +A 
Sbjct: 92  VRKV--ACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIAC 149

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G Y + ++SEDGDVY +G      LG        G    N L  +L     +  + VV +
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLG-------LGEEVENSLPKKL-----KFKKEVVSV 197

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           S     Y+  HT  +T  G LY FG  + G+LG+
Sbjct: 198 SCG---YY--HTALVTRDGFLYTFGENELGKLGL 226


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 636 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 684

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 685 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 740

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 741 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 800

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 801 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 852

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 853 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 887



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P     L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 684

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 685 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 744

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 745 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 801

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 802 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 861

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 862 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 911

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 912 AAGST-----HCLALTEDSEVHSWGSNDQCQ 937



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 756 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 815

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 816 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 873

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 874 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 921



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 703 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 762

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 763 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 820

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 821 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 876

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 931



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 868

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 869 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 927 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 36/363 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V+++GSN+SGQLG GTT     P  ++ L G  ++  +AGA  ++ 
Sbjct: 341 AGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQGLSG--VVAVSAGASSSLA 398

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G V+A+G ++ G+   G    +LV  P  V+ L  +  V A  G  F+  +  +G 
Sbjct: 399 IRSDGTVWAWGSNASGQLGDGTTTDRLV--PVQVQGLSGVVAVVA--GTSFSLAVRNDGT 454

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + +    +LG  T    + P  + G      VV +AAG  + LA+    +   V+++
Sbjct: 455 VWGWGYNGYGQLGTFTSLFVLVPVQVTGL---SGVVAVAAGNLHSLAVRSDGT---VWAL 508

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG GS T+   P      Q+  L  VV VAAG  H+  V  DG V  WG+  +
Sbjct: 509 GRNDNGQLGDGSWTNRSAP-----VQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSF 563

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G+    S P  V  L+   ++  A+ DY +  V  DG V+++G      L     
Sbjct: 564 GQLGDGSWFQRSAPVQVTGLSGRGSV-AASSDY-SMAVRYDGTVWAWGFNLYGQL----- 616

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G G   +N L P  V  L+     VV + + +S     H+ AL   G ++ +G    G
Sbjct: 617 --GDGTTSSNQLVPVQVQQLRG----VVAVEVGSS-----HSLALRSDGTVWTWGYNSFG 665

Query: 409 QLG 411
           QLG
Sbjct: 666 QLG 668



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 166/363 (45%), Gaps = 39/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V+++G+N+SGQLG GTT     P P+  L    ++   AG+  ++ 
Sbjct: 143 AGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVPVLGLS--EVVAVEAGSSHSLA 200

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+   G    +LV     V+ L  +  ++A  G+ ++  +  +G 
Sbjct: 201 LRSDGTVWAWGANASGQLGDGTTTKRLVP----VQVLSGVVAMEA--GSGYSLAVRNDGT 254

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + +    +LG  T  +   P  +LG  E   VV +AAG    L+LA +  G  V++ 
Sbjct: 255 VWAWGYNFSGQLGDDTVTSRSTPVQVLGLSE---VVAVAAGSS--LSLALRSDGT-VWAW 308

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+ G G+ ++   P      Q   L   V VAAG  H+  V  DG V  WG    
Sbjct: 309 GSNDYGQRGEGTTSNRAFP-----VQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNAS 363

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G     S P  VQ L+ V  + V+ G  ++  +  DG V+++G   S  LG    
Sbjct: 364 GQLGEGTTSNRSEPVQVQGLSGV--VAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTT 421

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D         L P  V  L  V   V   S          + A+   G ++ +G    G
Sbjct: 422 TD--------RLVPVQVQGLSGVVAVVAGTSF---------SLAVRNDGTVWGWGYNGYG 464

Query: 409 QLG 411
           QLG
Sbjct: 465 QLG 467



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 172/375 (45%), Gaps = 41/375 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           A AG  HS+A+ + G V+++G N  GQLG+G+      P  ++ L G   +   AG   +
Sbjct: 41  AAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLSG--GVSVDAGHYHS 98

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + + D G V+A+G +  G+   G    +LV  P  V+ L  +  V A  G+  +  L  +
Sbjct: 99  LAVRDDGTVWAWGDNPNGQLGEGTTTRRLV--PVQVQGLSEVVAVTA--GSSHSLALRSD 154

Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           G V+  +WG +A  +LG  T  N + P P+LG  E   VV + AG  + LAL    +   
Sbjct: 155 GTVW--AWGANASGQLGEGTTTNRLVPVPVLGLSE---VVAVEAGSSHSLALRSDGT--- 206

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G    G+LG G+ T    P      Q+L+   V + AG+ ++  V  DG V  WG+
Sbjct: 207 VWAWGANASGQLGDGTTTKRLVP-----VQVLS-GVVAMEAGSGYSLAVRNDGTVWAWGY 260

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
              G LG       S P  VQ L   + + VA G   +  +  DG V+++G  +    G 
Sbjct: 261 NFSGQLGDDTVTSRSTP--VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGE 318

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
              ++      A  L+  +  +                    AH+ A+   G ++A+G+ 
Sbjct: 319 GTTSNRAFPVQARGLSGGVAVAAGY-----------------AHSLAVRSDGTVWAWGSN 361

Query: 406 DKGQLGIELVNNQTE 420
             GQLG    +N++E
Sbjct: 362 ASGQLGEGTTSNRSE 376



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 43/361 (11%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G V++ G+N SGQLG GT +   R  P++ L    ++ AAAG+  ++ + + G V+A+G
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDN--RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAWG 61

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--D 178
            + +G+   G  G++    P  V+ L     V A  G++ +  +  +G V+  +WG+  +
Sbjct: 62  YNGYGQLGNGSLGSR--AEPVQVQGLSGGVSVDA--GHYHSLAVRDDGTVW--AWGDNPN 115

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LG  T    + P  + G  E   VV + AG  + LAL    +   V++ G    G+LG
Sbjct: 116 GQLGEGTTTRRLVPVQVQGLSE---VVAVTAGSSHSLALRSDGT---VWAWGANASGQLG 169

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            G+ T+   P       +L L  VV V AG+ H+  +  DG V  WG    G LG G   
Sbjct: 170 EGTTTNRLVP-----VPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTT 224

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
              VP  VQ L+ V A+   +G   +  V  DG V+++G   S  LG + +         
Sbjct: 225 KRLVP--VQVLSGVVAMEAGSG--YSLAVRNDGTVWAWGYNFSGQLGDDTVTSRS----- 275

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
              TP  V  L +    VV ++  +S+     + AL   G ++A+G+ D GQ G    +N
Sbjct: 276 ---TPVQVLGLSE----VVAVAAGSSL-----SLALRSDGTVWAWGSNDYGQRGEGTTSN 323

Query: 418 Q 418
           +
Sbjct: 324 R 324



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 164/365 (44%), Gaps = 43/365 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV   G V+++G N +GQLG GTT     P  ++ L    ++   AG+  ++ 
Sbjct: 93  AGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLS--EVVAVTAGSSHSLA 150

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+   G    +LV  P L   L  +  V+A  G+  +  L  +G 
Sbjct: 151 LRSDGTVWAWGANASGQLGEGTTTNRLVPVPVL--GLSEVVAVEA--GSSHSLALRSDGT 206

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG +A  +LG  T    + P  +L       VV + AG  Y LA+    +   V+
Sbjct: 207 VW--AWGANASGQLGDGTTTKRLVPVQVLS-----GVVAMEAGSGYSLAVRNDGT---VW 256

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG  + T    P      Q+L L  VV VAAG+  +  +  DG V  WG  
Sbjct: 257 AWGYNFSGQLGDDTVTSRSTP-----VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSN 311

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            YG  G G     + P  VQA      + VA G   +  V  DG V+++G   S  LG  
Sbjct: 312 DYGQRGEGTTSNRAFP--VQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEG 369

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
             +    NR   V    L          VV +S   S      + A+   G ++A+G+  
Sbjct: 370 TTS----NRSEPVQVQGL--------SGVVAVSAGAS-----SSLAIRSDGTVWAWGSNA 412

Query: 407 KGQLG 411
            GQLG
Sbjct: 413 SGQLG 417



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 61/293 (20%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S+A+ S G V+++GSN+SGQLG GTT +   P  ++ L G+  +   AG   ++ 
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSGV--VAVVAGTSFSLA 448

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G V+ +G + +G+   G   +  V  P  V  L  +  V A  GN  +  +  +G 
Sbjct: 449 VRNDGTVWGWGYNGYGQ--LGTFTSLFVLVPVQVTGLSGVVAVAA--GNLHSLAVRSDGT 504

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL------------ 217
           V+     ++ +LG  +  N   P  + G      VV +AAG  + LA+            
Sbjct: 505 VWALGRNDNGQLGDGSWTNRSAPVQVTGL---SGVVSVAAGDSHSLAVRYDGSVWAWGYN 561

Query: 218 ---------------ACQPSGMA--------------------VYSVGCGLGGKLGHGSR 242
                            Q +G++                    V++ G  L G+LG G+ 
Sbjct: 562 SFGQLGDGSWFQRSAPVQVTGLSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTT 621

Query: 243 TDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           +  +  P  ++Q + +    V V  G+ H+  +  DG V TWG+  +G LG+G
Sbjct: 622 SSNQLVPVQVQQLRGV----VAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 26/201 (12%)

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQD 277
            +P G  V++ G    G+LG G+R +   P      Q+L L  VV AA G+ H+  +  D
Sbjct: 1   MRPDGT-VWAAGNNGSGQLGDGTRDNRSTP-----VQVLGLSEVVAAAAGSIHSLALRND 54

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G V  WG+  YG LG+G+    + P  VQ L+    + V  G Y +  V +DG V+++G 
Sbjct: 55  GTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLS--GGVSVDAGHYHSLAVRDDGTVWAWGD 112

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
             +  LG     +G   R    L P  V  L +V      +++T     ++H+ AL   G
Sbjct: 113 NPNGQLG-----EGTTTRR---LVPVQVQGLSEV------VAVTAG---SSHSLALRSDG 155

Query: 398 KLYAFGAGDKGQLGIELVNNQ 418
            ++A+GA   GQLG     N+
Sbjct: 156 TVWAWGANASGQLGEGTTTNR 176


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 176/366 (48%), Gaps = 42/366 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           AG  HS+ V+  G V+++G N+SGQL G  T  +   P P+ S +   I+   +G   ++
Sbjct: 56  AGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPR--DIVSVVSGEAHSL 113

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            + +AG V+A+G +S G+   G    ++  +P  V  L ++  V A  G+F +  L  +G
Sbjct: 114 ALDEAGTVWAWGGNSSGQLGDGTTTDRV--TPMQVAGLTDVVAVAA--GDFHSLALRGDG 169

Query: 169 RVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            V+  +WG +   +LG  HTEP  + P P+ G LE   VV +AAG+ + LA+    +   
Sbjct: 170 TVW--AWGTNFHGQLGRGHTEPG-LTPEPVPG-LEG--VVALAAGFDFTLAVMDDGT--- 220

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V + G    G+LG G+ T    P  +     ++     V AG +HA  +G+DG V TWG 
Sbjct: 221 VRAWGANSSGQLGDGTFTQRLAPVEVAHISGIS----AVTAGTYHAVALGKDGGVWTWGA 276

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
              G LG G     +VP  V  L  VKA  VA+ D ++  + E G V ++G   S  LG 
Sbjct: 277 NSSGQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVLAWGANGSGQLGD 334

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
           +   D          TP  V  L+ V   V             H  AL   G L+A+G G
Sbjct: 335 SGTDD--------RATPGEVPGLRSVAAVVGGAQ---------HALALRGDGTLWAWGGG 377

Query: 406 DKGQLG 411
             GQLG
Sbjct: 378 LAGQLG 383



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 180/418 (43%), Gaps = 60/418 (14%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTM 108
            AG  H +A+   G V+++G N+ GQLG GT+   W  PR +  L+ +  +  AAG   ++
Sbjct: 1007 AGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDVEAV--AAGEQFSV 1064

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSR 166
             +   G  +A+G + +G+   G  G +L      +E+  L+       A      A+++ 
Sbjct: 1065 AVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMA- 1123

Query: 167  EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +G V   +WG++A  +LG  T      P  + G      VV ++ G  + LAL    +  
Sbjct: 1124 DGTVQ--AWGDNAHGQLGDGTTERRAAPVVVRGL---TGVVAVSTGAWHSLALRSDGT-- 1176

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V++ G    G+LG G+      P  +   Q +    V + AG +HA  V  DG V  WG
Sbjct: 1177 -VWAWGANGFGQLGDGTTLSRTTPVRVAGLQKV----VAIGAGGYHALAVRSDGSVWAWG 1231

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            +  +G LG G  E   +P  V+ L++V +  VA GD+ +  +  DG + ++G   +  LG
Sbjct: 1232 YNAFGQLGDGTAESRLLPVRVEGLSNVTS--VAGGDHHSLALLADGSLGAWGNNAAGQLG 1289

Query: 345  ---------------------------HNAIADGQG-------NRHANVLTPQLVTSLKQ 370
                                       H     G G       N H+ +      T  + 
Sbjct: 1290 DGTGTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRI 1349

Query: 371  VNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            V   V  +S   +I   A H+FA+   G ++A+G    GQLG+    +   R  P RV
Sbjct: 1350 VPRPVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGL---GDNANRAEPLRV 1404



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 157/369 (42%), Gaps = 43/369 (11%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG   S+AV   G  +++G+N SGQLG GT   +  P+ + S++ +R +  +AGA   + 
Sbjct: 957  AGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVKRVRAM--SAGAHHVVA 1014

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            + + G V+ +G ++ G+   G      +  P+ V  L+++  V AA   F  AVL   G 
Sbjct: 1015 LGEDGAVWTWGDNTLGQLGDGTSAPTWMW-PRQVPELRDVEAV-AAGEQFSVAVLVGGG- 1071

Query: 170  VYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
                +WG+       D + G    P  V    +  +    PV  + A   + +AL    +
Sbjct: 1072 --AHAWGSNEYGQLGDGKTGPRLTPVQVR---IEASKLRQPVRTVRAWAQHAVALMADGT 1126

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
               V + G    G+LG G+      P ++     +    V V+ GAWH+  +  DG V  
Sbjct: 1127 ---VQAWGDNAHGQLGDGTTERRAAPVVVRGLTGV----VAVSTGAWHSLALRSDGTVWA 1179

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            WG   +G LG G     + P  V  L  V AI    G Y    V  DG V+++G      
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQKVVAI--GAGGYHALAVRSDGSVWAWGYNAFGQ 1237

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
            LG     DG        L P  V  L  V         T+    + H+ AL   G L A+
Sbjct: 1238 LG-----DGTAESR---LLPVRVEGLSNV---------TSVAGGDHHSLALLADGSLGAW 1280

Query: 403  GAGDKGQLG 411
            G    GQLG
Sbjct: 1281 GNNAAGQLG 1289



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 53/370 (14%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H +A    G ++++G+N SGQLG G+T     P  ++ L+G+  +  +AG   ++ +   
Sbjct: 911  HGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV--SAGRAFSLAVRQD 968

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G  +A+G +  G+   G   ++ V  P+ V S+K +  + A  G      L  +G V+T 
Sbjct: 969  GTAWAWGANPSGQLGDGTNHSQRV--PKQVTSVKRVRAMSA--GAHHVVALGEDGAVWT- 1023

Query: 174  SWGND--ARLGHHTE-PNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             WG++   +LG  T  P  + P   P L  +E      +AAG  + +A+     G   ++
Sbjct: 1024 -WGDNTLGQLGDGTSAPTWMWPRQVPELRDVE-----AVAAGEQFSVAVLV---GGGAHA 1074

Query: 229  VGCGLGGKLGHGSRTDEKHPRL------IEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVC 281
             G    G+LG G    +  PRL      IE  +L   QPV  V A A HA  +  DG V 
Sbjct: 1075 WGSNEYGQLGDG----KTGPRLTPVQVRIEASKL--RQPVRTVRAWAQHAVALMADGTVQ 1128

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
             WG   +G LG G  E  + P VV+ L  V  + V+TG + +  +  DG V+++G     
Sbjct: 1129 AWGDNAHGQLGDGTTERRAAPVVVRGLTGV--VAVSTGAWHSLALRSDGTVWAWGANGFG 1186

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LG             +  TP  V  L++V      +++    Y   H  A+   G ++A
Sbjct: 1187 QLGDGTT--------LSRTTPVRVAGLQKV------VAIGAGGY---HALAVRSDGSVWA 1229

Query: 402  FGAGDKGQLG 411
            +G    GQLG
Sbjct: 1230 WGYNAFGQLG 1239



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 162/420 (38%), Gaps = 87/420 (20%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE------------------- 83
           R+    ++G  HS+A+   G V+++G NSSGQLG GTT +                    
Sbjct: 100 RDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGD 159

Query: 84  ------------W-------------------RPRPIRSLQGIRIIQAAAGAGRTMLISD 112
                       W                    P P+  L+G  ++  AAG   T+ + D
Sbjct: 160 FHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMD 217

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            G V A+G +S G+   G    +L  +P  V  +  I  V A  G +    L ++G V+T
Sbjct: 218 DGTVRAWGANSSGQLGDGTFTQRL--APVEVAHISGISAVTA--GTYHAVALGKDGGVWT 273

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +   +  +LG     +   P  + G      V  + A    LL          V + G  
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSLALLEAGS------VLAWGAN 327

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG     D   P  +   + +      V  GA HA  +  DG +  WG G  G LG
Sbjct: 328 GSGQLGDSGTDDRATPGEVPGLRSV----AAVVGGAQHALALRGDGTLWAWGGGLAGQLG 383

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           HG  E   VP  +  L DV ++  A G + +     DG V+S+G      LG    A+  
Sbjct: 384 HGGSERHVVPAPLLRLADVASM--AAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAE-- 439

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
             RHA V              RV  +S    +  +  H+ A+   G ++A+G    GQLG
Sbjct: 440 --RHAAV--------------RVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLG 483



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 157/360 (43%), Gaps = 39/360 (10%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H +A+ + G +  +G N  GQLG G      RP  +R L   R+ + A G   T+++   
Sbjct: 711  HVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLG--RVDRLAVGRAHTLMVRPD 768

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G V A+G+++ G+   G   T     P LV  +  +  V  A G   +  L+ +G V+  
Sbjct: 769  GAVLAWGENASGQLGDGT--TTHRAGPVLVRGVPCVRSV--ASGVLHSLALACDGSVW-- 822

Query: 174  SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            +WG + R  LG  T  + V P  + G    + V         LLA          ++ G 
Sbjct: 823  AWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLALLADGT------AWAWGA 876

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
               G+LG GS +D   P  ++    L    + VA G  H    G+DG +  WG    G L
Sbjct: 877  NAHGQLGDGSTSDRAVPGQLK----LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQL 932

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G G+      P  V+ L  V +  V+ G   +  V +DG  +++G   S  L       G
Sbjct: 933  GEGSTTPSPTPVRVKGLEGVAS--VSAGRAFSLAVRQDGTAWAWGANPSGQL-------G 983

Query: 352  QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             G  H+  + P+ VTS+K+V       +++   +   H  AL E G ++ +G    GQLG
Sbjct: 984  DGTNHSQRV-PKQVTSVKRVR------AMSAGAH---HVVALGEDGAVWTWGDNTLGQLG 1033



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 166/423 (39%), Gaps = 84/423 (19%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR------------- 96
           AG  HS+A    G V+S+G N+ GQLG GTT E      +  L GIR             
Sbjct: 407 AGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHSLAVG 466

Query: 97  -----------------------------------IIQAAAGAGRTMLISDAGQVYAFGK 121
                                              ++  A G   TM +   G V+A+G 
Sbjct: 467 ADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGY 526

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           ++ G+   G    +L  +P  V  L ++  V A  G +F+  L  +G V+T+  G + ++
Sbjct: 527 NALGQLGDGTTVDRL--TPVRVARLDSVVAVAA--GTYFSMALRGDGTVWTWGEGFEGQV 582

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G       + P  + G L N  V ++AAG  +  ALA +  G  V++ G    G+LG G+
Sbjct: 583 GDGGGVQRLFPVQVAG-LTN--VTRVAAGSAH--ALAVRGDGT-VWAWGDNGEGQLGDGT 636

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
            +D   P  +     +      V+ G  H+  +  DG V  WG+  YG LG G       
Sbjct: 637 WSDRFRPVQVPGLTGIT----AVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVR 692

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P VV  L  ++A+H +        +  DG +  +G      LG  A   G  +R      
Sbjct: 693 PAVVPGLTGIQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGAA--GWSSR------ 742

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 421
           P  V  L +V+   V           AHT  +   G + A+G    GQLG       T R
Sbjct: 743 PVQVRGLGRVDRLAVG---------RAHTLMVRPDGAVLAWGENASGQLGD---GTTTHR 790

Query: 422 GNP 424
             P
Sbjct: 791 AGP 793



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 35/366 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           ++  AG  H++AV   G V+++G N  GQLG GT  + +RP  +  L GI  +  + G  
Sbjct: 603 TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTGITAV--SGGRS 660

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +   G V A+G + +G+   G   +++   P +V  L  I  +  +  +     L 
Sbjct: 661 HSMALHGDGSVRAWGYNGYGQLGDGTFTSRV--RPAVVPGLTGIQALHPS--HLHVLALH 716

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G +  + +    +LG         P  + G      V ++A G  + L +  +P G A
Sbjct: 717 ADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGR---VDRLAVGRAHTLMV--RPDG-A 770

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V + G    G+LG G+ T    P L+     +      VA+G  H+  +  DG V  WG 
Sbjct: 771 VLAWGENASGQLGDGTTTHRAGPVLVRGVPCVR----SVASGVLHSLALACDGSVWAWGA 826

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
              G LG G      +P  V  L    A+        +  +  DG  +++G      LG 
Sbjct: 827 NGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQLGD 884

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            + +D            + V    ++   ++ ++L  +     H  A  E G L+A+GA 
Sbjct: 885 GSTSD------------RAVPGQLKLPSNIMSVALGET-----HGLAAGEDGALWAWGAN 927

Query: 406 DKGQLG 411
             GQLG
Sbjct: 928 GSGQLG 933



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 141/294 (47%), Gaps = 22/294 (7%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            HS+A+ S G V+++G+N  GQLG GTT     P  +  LQ  +++   AG    + +   
Sbjct: 1167 HSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ--KVVAIGAGGYHALAVRSD 1224

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G V+A+G ++FG+   G   ++L+  P  VE L N+  V  A G+  +  L  +G +   
Sbjct: 1225 GSVWAWGYNAFGQLGDGTAESRLL--PVRVEGLSNVTSV--AGGDHHSLALLADGSL--G 1278

Query: 174  SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            +WGN+A  +LG  T         + G      VV++ AG  + LAL    +   V++ G 
Sbjct: 1279 AWGNNAAGQLGDGTGTTRYSRVWVKGV---DGVVEVRAGAAHTLALRGDGT---VWTWGD 1332

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
                +LG G   D    R++ +  +  L  V  + AGA H+  VG  G V  WG   +G 
Sbjct: 1333 NTHSQLGAGD--DSTRTRIVPR-PVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQ 1389

Query: 291  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            LG G+    + P  V+ L +V    V+ G   +  +  DG V S+G     +LG
Sbjct: 1390 LGLGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRDGTVSSWGSSLHGALG 1441



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 166/377 (44%), Gaps = 39/377 (10%)

Query: 37  GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
           GE    R  +  + G  H++A+   G ++++G   +GQLGHG +E    P P+  L    
Sbjct: 344 GEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLA--D 401

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           +   AAG+  ++     G V+++G++++G+   G    +   +   VE L  I  V AA 
Sbjct: 402 VASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAER--HAAVRVEGLSGIRGV-AAS 458

Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           G+   AV   +G V+  +WG +A  +LG  +  +   P  + G      VV +A G  + 
Sbjct: 459 GHHSLAV-GADGTVW--AWGRNAAGQLGDGSTRDRARPVAVSGLTS---VVAVATGGSHT 512

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    +   V++ G    G+LG G+  D   P  + +   +    V VAAG + +  +
Sbjct: 513 MALRGDGT---VWAWGYNALGQLGDGTTVDRLTPVRVARLDSV----VAVAAGTYFSMAL 565

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG V TWG G  G +G G       P  V  L +V    VA G      V  DG V++
Sbjct: 566 RGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLTNVT--RVAAGSAHALAVRGDGTVWA 623

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G      LG    +D    R   V  P L T +  V+               +H+ AL 
Sbjct: 624 WGDNGEGQLGDGTWSD----RFRPVQVPGL-TGITAVSGG------------RSHSMALH 666

Query: 395 ESGKLYAFGAGDKGQLG 411
             G + A+G    GQLG
Sbjct: 667 GDGSVRAWGYNGYGQLG 683



 Score = 45.1 bits (105), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 45/218 (20%)

Query: 214 LLALACQPSG-MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAAGAWHA 271
           LL +AC+P+G +A                    + PR     ++ +   P+ +AAG+ H+
Sbjct: 20  LLLVACEPTGELAAL------------------EQPRAARTQRITVTAPPMRIAAGSQHS 61

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             V   G V  WG    G LG      + + P  + +  D+  + V +G+  +  + E G
Sbjct: 62  LYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDI--VSVVSGEAHSLALDEAG 119

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            V+++G   S  LG     D         +TP  V  L  V      +++    +   H+
Sbjct: 120 TVWAWGGNSSGQLGDGTTTD--------RVTPMQVAGLTDV------VAVAAGDF---HS 162

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERG-NPERV 427
            AL   G ++A+G    GQLG       TE G  PE V
Sbjct: 163 LALRGDGTVWAWGTNFHGQLG----RGHTEPGLTPEPV 196



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS AV  KG V+++G NS GQLG G       P  ++ L  + ++  + GA  ++ 
Sbjct: 1365 AGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSVV--SGGADFSLA 1422

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
            +   G V ++G    G    G  G +  +SP  V
Sbjct: 1423 MQRDGTVSSWGSSLHGALGLGTAGQR--SSPGQV 1454


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   E        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G++  K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V +S+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 27/361 (7%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           G +  V+    VY +GSNSS QL  GT E+  +P+   +    + I+A  G   T +IS 
Sbjct: 373 GEAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQTIEA--GQYCTFVISS 430

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 171
            G V A GK S+G    G    +        E  + I  V ++ G +  T   + EG V+
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LGH        P  + G L+   VV ++AGY +  A++       +Y+ G 
Sbjct: 491 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS---EDGELYTWGE 547

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
           G  G+LGHG       P L++    +      V+ G+ H   + +DGR V ++G G  G 
Sbjct: 548 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 603

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG  A LG      
Sbjct: 604 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC----- 656

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
             G+  A  L P+L+  L     RVV IS+ +S     H  AL+   ++YA+G    GQ 
Sbjct: 657 --GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEVYAWGNNSMGQC 707

Query: 411 G 411
           G
Sbjct: 708 G 708



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 24/350 (6%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 101
           ++Q I AG   +  ++S G V + G  S G+LG G +  +   +       + I+ + ++
Sbjct: 414 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 473

Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
            G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G  
Sbjct: 474 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 531

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A +S +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL+ 
Sbjct: 532 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 587

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   G+
Sbjct: 588 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 644

Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G  
Sbjct: 645 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWG-- 700

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            + S+G      GQGN    +  P+ V  L  V  + +    ++S+ W A
Sbjct: 701 -NNSMGQC----GQGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLAWTA 745



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 18/179 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 579 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 638

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    VV  +IG+     LS 
Sbjct: 639 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 692

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +  VY  +WGN++      G+ T P   +P  ++G L+ + + QI+AG  + LA    P
Sbjct: 693 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVVG-LDGVAIQQISAGTSHSLAWTALP 747


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ +
Sbjct: 51  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 108

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 109 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 166

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 167 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 219

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 220 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 277

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 278 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 93  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 152

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 153 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 211

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 212 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 268

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   G
Sbjct: 269 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 323

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 324 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 351



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 73  GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 128

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 185

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 186 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 243

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 244 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 303

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 304 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 348

Query: 419 TERGN 423
           T +GN
Sbjct: 349 TVKGN 353



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 203 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 262

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 263 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 320

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 321 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 352


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 177/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG            G G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCGACL---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  +L+   ++YA+G    GQ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCG 698



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 18/179 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALP 737


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH +  E  +P PI +L G  I+  A 
Sbjct: 34  RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPEPIGALAGQHIVHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQV+++G  S G+   G+   +  VT P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +L+ IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G + T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 TRGQLG 328



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 30/315 (9%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G  SFG+   G     ++  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
               +LGH +E +  EP   +G L    +V +A G  + +AL+ Q     V+S G G  G
Sbjct: 61  NTKGQLGHESEGSKPEP---IGALAGQHIVHVACGESHSVALSDQGQ---VFSWGAGSDG 114

Query: 236 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG  +  D    PRLI++   LN Q ++ ++ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 294 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 413 ELVNNQTERGNPERV 427
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 28/349 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G +S GQ G G+  +   P P     +    + + A G   ++ + + G+VY  G ++ 
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +  +G+K    P+ + +L    +V  A G   +  LS +G+V+++  G+D +LG  
Sbjct: 64  GQLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLT 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 243
           T  + V    L+  L    ++QI+ G  + LALA   +    ++ G    G+LG G    
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA---ADGQFFTWGQNSYGQLGLGKECP 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+ ++    + L    VAAG  H+  +   G V  WG    G LG  +E     P 
Sbjct: 177 SQASPQRVKSLDGIPL--AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V+ L   K ++++ G+  T V+++ G V++FG G    LGH+++ D    R        
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
               L+ +   V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G V+S+G+ S GQLG  T E+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++S+G+   G +      SPQ V+SL  I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG ++  +LG   E  D E    +  L +  VV I+ G  +   L    SG  V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 287 RYGCLGHG---NEECESVPK 303
             G LG G   N +C S  K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G NSSGQLG     +   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   E        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G++  K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  126 bits (317), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 110/372 (29%), Positives = 176/372 (47%), Gaps = 38/372 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q +  P  S ++  K   Y++GSNSS QL  G  ++   P+   + +    IQ  AG   
Sbjct: 324 QHLGSPNDSSSL--KHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNA--IQLEAGQYC 379

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIG-NFFT 161
           T  + D G ++A GK S G+   G   +K     Q +  L    +NI  + ++ G +  T
Sbjct: 380 TFALFDDGSLHACGKGSHGKLGLGDSSSK-----QCLHKLNLFNQNIDQISSSKGSDSHT 434

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
             L++ G VY++  G   +LGH        P  + G  +N  +  I+AG  +  A+    
Sbjct: 435 LALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDG 494

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG-RV 280
               +Y+ G G  G+LGHG  + ++ P L+      +     VAAG  H  V+ +D   V
Sbjct: 495 D---LYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQ----VAAGCSHTVVLSKDEMTV 547

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            T+G G  G LGHGN + E  PK+V AL  ++   +A G   +  ++  G +Y +GCG  
Sbjct: 548 WTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC 607

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
                     G G   A  L P++V SL+ V+  +V ISL      + H  AL+   ++Y
Sbjct: 608 L---------GVGAADAVHLLPKIVESLRDVH--IVDISLG-----DCHCLALSADHEVY 651

Query: 401 AFGAGDKGQLGI 412
           ++G  + GQ G+
Sbjct: 652 SWGNNNMGQCGL 663



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 22/286 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGA 104
           S +     H++A+T  GVVYS+G    G+LGHG    +  P+ IR +   +II   +AG+
Sbjct: 425 SSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGS 484

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  I+  G +Y +G+   G   +G    + V  P LV S+      Q A G   T VL
Sbjct: 485 RHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRV--PTLVRSIDA--ASQVAAGCSHTVVL 540

Query: 165 SR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           S+ E  V+TF  G++ +LGH     +  P  ++  L+ I + +IAAG    +AL    +G
Sbjct: 541 SKDEMTVWTFGAGDNGKLGHGNTKMEYYPK-IVDALKGIRIKKIAAGTQCSIALTW--TG 597

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
             +Y  GC  G  LG G+  D  H  P+++E   L ++  V ++ G  H   +  D  V 
Sbjct: 598 F-IYVWGC--GPCLGVGA-ADAVHLLPKIVE--SLRDVHIVDISLGDCHCLALSADHEVY 651

Query: 282 TWGWGRYGCLGHGNEEC---ESVPKVVQALNDVKAIHVATGDYTTF 324
           +WG    G  G G+  C    S+P  V AL+ +K   ++TG   +F
Sbjct: 652 SWGNNNMGQCGLGH--CFTPVSLPTKVLALDGIKIEQISTGTSHSF 695


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 9/239 (3%)

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           L+S  G VY +G + FG+   G   ++L + P  +  L N+FVV A+ G   T +LS+EG
Sbjct: 7   LVSGLGDVYTWGANFFGQ--LGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLLSKEG 63

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V++F  G + RLGH    N   P P+  +LE+  +  IAAG+ + +A+        +++
Sbjct: 64  KVFSFGDGANGRLGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAI---DDDGKLFT 119

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            GCG  G+LGHG+  D   PR +++   + ++ ++ +    H+AV  ++G V TWG G +
Sbjct: 120 WGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEH 179

Query: 289 GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G LG G+ E    P +V+++ D  +  + V+ G   T  V+ DG + ++G G+   LGH
Sbjct: 180 GQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGH 238



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 5/245 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  V+  G VY++G+N  GQLG   +     P  +  L  + ++ A+ G   T+L+
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLL 59

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S  G+V++FG  + G   +G    +  + PQ + SL++  +   A G   +  +  +G++
Sbjct: 60  SKEGKVFSFGDGANGRLGHG--NCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKL 117

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           +T+  GN  RLGH    +   P   +  L  I +  + A   Y  +  C  +G  V++ G
Sbjct: 118 FTWGCGNAGRLGHGNVLDVWRPR-FVDRLYRIRMKAMMASGSYDHSAVCCENG-TVWTWG 175

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
            G  G+LG GS      P L++     NL  V V+ G  H A V  DG + TWG G +G 
Sbjct: 176 LGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQ 235

Query: 291 LGHGN 295
           LGHGN
Sbjct: 236 LGHGN 240



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 22/257 (8%)

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G +  A++S  G VYT+      +LG         P  L   L N+ VV  + G  + L 
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSEL--HLPNVFVVSASCGGMHTLL 58

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L+ +     V+S G G  G+LGHG+  +   P+ I   +  + +   +AAG  H+  +  
Sbjct: 59  LSKEGK---VFSFGDGANGRLGHGNCRNYSLPQPIASLE--SKRITFIAAGWTHSMAIDD 113

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA-IHVATGDYT-TFVVSEDGDVYS 334
           DG++ TWG G  G LGHGN      P+ V  L  ++    +A+G Y  + V  E+G V++
Sbjct: 114 DGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWT 173

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G GE     H  +  G    H   L P LV S+   N  +V++S        AHT A+T
Sbjct: 174 WGLGE-----HGQLGVGSTESH---LEPVLVKSMADANLHIVEVSCGG-----AHTAAVT 220

Query: 395 ESGKLYAFGAGDKGQLG 411
             G L  +G GD GQLG
Sbjct: 221 NDGTLLTWGRGDWGQLG 237



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G    G+LG   R   +   L  +  L N+  V  + G  H  ++ ++G+V ++G 
Sbjct: 14  VYTWGANFFGQLG---RDYSRLWSLPSELHLPNVFVVSASCGGMHTLLLSKEGKVFSFGD 70

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G  G LGHGN    S+P+ + +L   +   +A G   +  + +DG ++++GCG +  LGH
Sbjct: 71  GANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGH 130

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
             + D        V  P+ V  L ++  + +  S +       H+    E+G ++ +G G
Sbjct: 131 GNVLD--------VWRPRFVDRLYRIRMKAMMASGSYD-----HSAVCCENGTVWTWGLG 177

Query: 406 DKGQLGIELVNNQTE 420
           + GQLG+    +  E
Sbjct: 178 EHGQLGVGSTESHLE 192



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 8/198 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            A  G  H++ ++ +G V+SFG  ++G+LGHG       P+PI SL+  RI   AAG   
Sbjct: 48  SASCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTH 107

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV-VQAAIGNF-FTAVL 164
           +M I D G+++ +G  + G   +G      V  P+ V+ L  I +    A G++  +AV 
Sbjct: 108 SMAIDDDGKLFTWGCGNAGRLGHG--NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC 165

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSG 223
              G V+T+  G   +LG  +  + +EP  +    + N+ +V+++ G  +  A+    + 
Sbjct: 166 CENGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGT- 224

Query: 224 MAVYSVGCGLGGKLGHGS 241
             + + G G  G+LGHG+
Sbjct: 225 --LLTWGRGDWGQLGHGN 240


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 171/357 (47%), Gaps = 31/357 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    P  I       + Q A G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
           + + +  + +   +   SP  L+  L++  ++Q   G+  +  LS  G+V   SWG++  
Sbjct: 67  NDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDC 124

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH T+   V+   ++  L    VVQIA G  + LAL    S   +YS G  + G+LG
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 181

Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 295
             S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +
Sbjct: 182 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLND 239

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
           E   S P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH          
Sbjct: 240 ETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF-------- 291

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
            +N + P++V  L  +   + Q++  N      HT AL  S G++YAFG G  GQLG
Sbjct: 292 SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 341



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP---IRSLQGIRIIQAAAG 103
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  R  P   I  LQ   IIQ   G
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           +  ++ +SD GQV ++G +  G+  +     ++V  P++V  L    VVQ A GN  +  
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLA 162

Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLA 216
           L+  G +Y  SWG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++
Sbjct: 163 LTSCGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 219

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
                SG AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  
Sbjct: 220 ----KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTN 272

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
           +G V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+F
Sbjct: 273 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 332

Query: 336 GCGESASLG 344
           G G S  LG
Sbjct: 333 GLGSSGQLG 341



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 99  QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 158

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV     +T    P  + +L  I +   A G   + 
Sbjct: 159 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 216

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  +  
Sbjct: 217 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 274

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GRV 
Sbjct: 275 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 330

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 331 AFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 24/228 (10%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V Q+A G+ + L L    +   VY+ G     +LGH   T  K PR+     +  LQ  V
Sbjct: 42  VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPRMSPFLLIPELQDYV 96

Query: 264 V---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 319
           +     G+ H+  +   G+V +WG    G LGH  ++E   +PKVV+ L     + +A G
Sbjct: 97  IIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACG 156

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           +  +  ++  G++YS+G      LG N+  D     H N   P  +T+L       + I 
Sbjct: 157 NNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT---HCNY--PLRLTTL-------LGIP 204

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           L        H+F +++SG ++ +G  + GQLG+   N++T R  P ++
Sbjct: 205 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 249



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 207 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 266

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 267 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 324

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GRVY F  G+  +LG  +  + + P  ++G
Sbjct: 325 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 356



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 280 VCTWGWGRYGCLGHG---NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           V   G   Y  LGH         S   ++  L D   I +  G   +  +S+ G V S+G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             +   LGH             V  P++V  L  V + VVQI+  N+     H+ ALT  
Sbjct: 121 DNDCGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSC 166

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           G+LY++G+   GQLG+   N+ T    P R+
Sbjct: 167 GELYSWGSNIYGQLGVNSPNDLTHCNYPLRL 197


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   E        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G++  K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 169/367 (46%), Gaps = 45/367 (12%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  H++AV   G V+S+G N+ GQLG GTT +   P  ++ L G+  I  +AG   T+ 
Sbjct: 1034 AGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGVTAI--SAGDAHTVA 1091

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G++S+G+   G   T    +P  V+ L  +  +  A G+  T  L ++G 
Sbjct: 1092 LRRDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTGVIAI--AAGSLHTVALRQDGT 1147

Query: 170  VYTF---SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            V+ +   SWG   D    H   P  V+   L G      V+ IAAG  + +AL    +  
Sbjct: 1148 VWAWGRNSWGQLGDGTTTHRATP--VQVQGLTG------VIAIAAGSLHTVALRQDGT-- 1197

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V++ G    G+LG G+ T    P  ++    +      +AAG +H A V QDG   TWG
Sbjct: 1198 -VWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVT----TIAAGYFHTAAVRQDGTAWTWG 1252

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            +  +G LG G     + P  VQ L  V A+  A G   T VV EDG V+++G      LG
Sbjct: 1253 FNLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLG 1310

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
            + +  D    R   V    L  +      R              HT A++  G  + +G 
Sbjct: 1311 NGSSTD----RSTPVQVEALTGAFSLAAGRF-------------HTVAMSPDGAGWGWGR 1353

Query: 405  GDKGQLG 411
             + GQ+G
Sbjct: 1354 NNLGQVG 1360



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 150/303 (49%), Gaps = 22/303 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  H++A+   G V+++G NS GQLG GTT     P  ++ L G+  I  AAG+  T+ 
Sbjct: 1084 AGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1141

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G++S+G+   G   T    +P  V+ L  +  +  A G+  T  L ++G 
Sbjct: 1142 LRQDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTGVIAI--AAGSLHTVALRQDGT 1197

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+ + + +  +LG  T    + P  + G      V  IAAGY +  A+  +  G A ++ 
Sbjct: 1198 VWAWGFNDLGQLGDGTTTRRLTPAQVQGL---TGVTTIAAGYFHTAAV--RQDGTA-WTW 1251

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G  L G+LG G+ TD   P  ++    ++     +AAG  H  VVG+DG V  W WG   
Sbjct: 1252 GFNLWGQLGDGTFTDRATPVQVQGLTGVS----ALAAGYAHTVVVGEDGTV--WAWGNNS 1305

Query: 290  C--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
               LG+G+    S P  V+AL    A  +A G + T  +S DG  + +G      +G   
Sbjct: 1306 GTQLGNGSSTDRSTPVQVEALT--GAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGT 1363

Query: 348  IAD 350
             AD
Sbjct: 1364 TAD 1366



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG G ++A+   G ++++GSNS GQLG+GTT   +RP  ++ L G+  I AA+G   T+ 
Sbjct: 278 AGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAI-AASGI-HTVA 335

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G ++A+G +S G+   G   T +  +P  V+ L  +  +  A G  +T    ++G 
Sbjct: 336 LRQDGTLWAWGNNSSGQLGDGT--TTVRFTPVQVQGLTGVTAI--AAGYLYTVASKQDGT 391

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T    + P  + G      V  IAAGY Y   +A +  G  V+
Sbjct: 392 VW--AWGDNEWGQLGDGTTTRRLTPVQVQGL---TGVTAIAAGYLY--TVASKQDGT-VW 443

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G     +LG G+ +    P  ++  + +      +AA       V QDG V  WG   
Sbjct: 444 AWGDNKRSQLGEGAVSQRHTPGEVQGLEGIT----AIAASNLLTVAVRQDGTVWAWGDNA 499

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G       P  VQ L  V A  VA  DY    V +DG V+++G G    LG   
Sbjct: 500 RGQLGDGTTTRRLTPVQVQGLAGVTA--VAASDYHLVAVRQDGTVWAWGVGFWGQLG--- 554

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG G   +  +  Q +T +  +               + HT AL + G ++A+G  + 
Sbjct: 555 --DGTGMDRSTPVQVQGLTGVTAIAAG------------SNHTVALRQDGTVWAWGFNNY 600

Query: 408 GQLG 411
           GQLG
Sbjct: 601 GQLG 604



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 42/376 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           +++A    G V+++G N  GQLG GTT     P  ++ L G+  I  AAG   T+     
Sbjct: 382 YTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAI--AAGYLYTVASKQD 439

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G +    ++ G        +P  V+ L+ I  + A+  N  T  + ++G V+  
Sbjct: 440 GTVWAWGDNK--RSQLGEGAVSQRHTPGEVQGLEGITAIAAS--NLLTVAVRQDGTVW-- 493

Query: 174 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           +WG++AR  LG  T    + P  + G      V  +AA   +L+A+    +   V++ G 
Sbjct: 494 AWGDNARGQLGDGTTTRRLTPVQVQGLAG---VTAVAASDYHLVAVRQDGT---VWAWGV 547

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G  G+LG G+  D   P  ++    +      +AAG+ H   + QDG V  WG+  YG L
Sbjct: 548 GFWGQLGDGTGMDRSTPVQVQGLTGVT----AIAAGSNHTVALRQDGTVWAWGFNNYGQL 603

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G G       P  VQ      A+ +A G   T  + +DG V+++G      LG       
Sbjct: 604 GDGTTAGHLTP--VQVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTT-- 659

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +RH    +P  V  L  V      I++  +   N HT A+ + G ++ +G    GQLG
Sbjct: 660 --HRH----SPVQVQGLADV------IAIATN---NGHTVAVRQDGTVWTWGLNSSGQLG 704

Query: 412 IELVNNQTERGNPERV 427
                  T+R  P +V
Sbjct: 705 D---GTTTQRLTPVQV 717



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 170/380 (44%), Gaps = 42/380 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A +  G V+++G NSSGQLG GT+ + + P  ++ L G+  +  AAG   +  
Sbjct: 128 AGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTAV--AAGRNHSAA 185

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G +  G+   G    +L  +P  V+ L  +  + A   +  T  L ++G 
Sbjct: 186 LGQGGTVWTWGDNLVGQLGDGTSTQRL--TPVQVQGLTGVIAISA--NDSETVALRQDGT 241

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WGN++  +LG  T      P  +LG      V  IAAG  + +AL    +   ++
Sbjct: 242 VW--AWGNNSSGQLGDGTTTVRFTPVQVLGL---TGVTAIAAGGGFAVALRQDGT---LW 293

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+G+      P   EQ Q L     + A+G  H   + QDG +  WG   
Sbjct: 294 AWGSNSRGQLGNGTTFGSYRP---EQVQGLTGVTAIAASGI-HTVALRQDGTLWAWGNNS 349

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G       P  VQ L  V AI  A G   T    +DG V+++G  E   LG   
Sbjct: 350 SGQLGDGTTTVRFTPVQVQGLTGVTAI--AAGYLYTVASKQDGTVWAWGDNEWGQLG--- 404

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG   R    LTP  V  L  V                 +T A  + G ++A+G   +
Sbjct: 405 --DGTTTRR---LTPVQVQGLTGVTAIAAGY---------LYTVASKQDGTVWAWGDNKR 450

Query: 408 GQLGIELVNNQTERGNPERV 427
            QLG   V+   +R  P  V
Sbjct: 451 SQLGEGAVS---QRHTPGEV 467



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 159/366 (43%), Gaps = 39/366 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+   G V+++G N+ GQLG GTT     P  +  + G   I  AAG   T+ 
Sbjct: 578 AGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAVAI--AAGGSHTVA 635

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G + +G+   G   T    SP  V+ L ++  +  A  N  T  + ++G 
Sbjct: 636 LLQDGTVWTWGYNIWGQLGDGT--TTHRHSPVQVQGLADVIAI--ATNNGHTVAVRQDGT 691

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM----A 225
           V+T+   +  +LG  T    + P  + G  +   +          L  + Q   M     
Sbjct: 692 VWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAI----------LTSSSQTVAMRQDRT 741

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +++ G    G+LG G+ T    P  ++      +    +AAG +H A  GQDG + TWG 
Sbjct: 742 LWAWGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGL 797

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             YG LG G      +P  VQ L    A  +A GD  T  V +DG V+++G   S  LG 
Sbjct: 798 NSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGD 857

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                      A  LTP  V    QV   +   ++    Y   H  A  + G L+ +G  
Sbjct: 858 GTT--------AQSLTPVQV----QVQGLMDVTAMAAGGY---HMAAAGQDGTLWTWGLN 902

Query: 406 DKGQLG 411
             GQLG
Sbjct: 903 SYGQLG 908



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 162/380 (42%), Gaps = 36/380 (9%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  H  A    G ++++G NS GQLG G       P  ++ L        AAG   T+ 
Sbjct: 778  AGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVA 837

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G +  G+   G     L      V+ L ++  +  A G +  A   ++G 
Sbjct: 838  VRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAM--AAGGYHMAAAGQDGT 895

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            ++T+   +  +LG       + P  + G ++   V  +AAG  Y +A A Q     +++ 
Sbjct: 896  LWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VTAMAAG-GYHMAAAGQDG--TLWTW 949

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G    G+LG G  +    P  ++      +    +AAG +H A  GQDG + TWG   YG
Sbjct: 950  GLNSYGQLGGGPLSYRLLPVQVQGL----MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYG 1005

Query: 290  CLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
             LG G  ++    V   VQ L  V AI  A G   T  V +DG V+S+G      LG   
Sbjct: 1006 QLGGGPLSQSLTPVQVQVQGLTGVAAI--AAGFSHTLAVRQDGTVWSWGGNAYGQLGDGT 1063

Query: 348  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                     A  LTP  V  L  V      IS       +AHT AL   G ++A+G    
Sbjct: 1064 T--------AQSLTPVQVQGLTGVTA----ISAG-----DAHTVALRRDGTVWAWGRNSW 1106

Query: 408  GQLGIELVNNQTERGNPERV 427
            GQLG       T R  P +V
Sbjct: 1107 GQLGD---GTTTHRATPVQV 1123



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 164/361 (45%), Gaps = 43/361 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++AV   G V+++G+N  GQLG GTT    R  P++ + G   I  AAG   T+  S  
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTR--RFSPVQVMTGATAI--AAGIYHTVAASQD 139

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+ +G++S G+   G    +   SP  V+ L  +  V  A G   +A L + G V+T 
Sbjct: 140 GTVWTWGRNSSGQLGDGTSIQRF--SPVQVQGLTGVTAV--AAGRNHSAALGQGGTVWT- 194

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            WG++   +LG  T    + P  + G      V+ I+A     +AL    +   V++ G 
Sbjct: 195 -WGDNLVGQLGDGTSTQRLTPVQVQGL---TGVIAISANDSETVALRQDGT---VWAWGN 247

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LG G+ T    P      Q+L L  V  +AAG   A  + QDG +  WG    G 
Sbjct: 248 NSSGQLGDGTTTVRFTP-----VQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQ 302

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG+G       P+ VQ L  V AI  A+G + T  + +DG ++++G   S  LG     D
Sbjct: 303 LGNGTTFGSYRPEQVQGLTGVTAI-AASGIH-TVALRQDGTLWAWGNNSSGQLG-----D 355

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           G         TP  V  L  V                 +T A  + G ++A+G  + GQL
Sbjct: 356 GTTTVR---FTPVQVQGLTGVTAIAAGY---------LYTVASKQDGTVWAWGDNEWGQL 403

Query: 411 G 411
           G
Sbjct: 404 G 404



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 35/361 (9%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-D 112
             ++A+     ++++G N  GQLG GTT    R  P++ +QG+  + A A  G  M  +  
Sbjct: 732  QTVAMRQDRTLWAWGDNHWGQLGDGTTTR--RLTPVQ-VQGLMDVTAMAAGGYHMAAAGQ 788

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
             G ++ +G +S+G+   G    +L+  P  V+ L +      A G+  T  + ++G V+ 
Sbjct: 789  DGTLWTWGLNSYGQLGGGPLSYRLL--PVQVQGLTSATATAIAAGDSHTVAVRQDGTVW- 845

Query: 173  FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
             +WG++   +LG  T    + P  +   ++ +  V   A   Y +A A Q     +++ G
Sbjct: 846  -AWGSNFSGQLGDGTTAQSLTPVQV--QVQGLMDVTAMAAGGYHMAAAGQDG--TLWTWG 900

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
                G+LG G  +    P  ++      +    +AAG +H A  GQDG + TWG   YG 
Sbjct: 901  LNSYGQLGGGPLSYRLLPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 956

Query: 291  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            LG G      +P  VQ L  V A+  A G Y      +DG ++++G      LG      
Sbjct: 957  LGGGPLSYRLLPVQVQGLMSVTAM--AAGGYHMAAAGQDGTLWTWGLNSYGQLG------ 1008

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
              G   +  LTP  V    QV       ++       +HT A+ + G ++++G    GQL
Sbjct: 1009 --GGPLSQSLTPVQV----QVQGLTGVAAIAAGF---SHTLAVRQDGTVWSWGGNAYGQL 1059

Query: 411  G 411
            G
Sbjct: 1060 G 1060



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 20/255 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  H++A+   G V+++G NS GQLG GTT     P  ++ L G+  I  AAG+  T+ 
Sbjct: 1134 AGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1191

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G +  G+   G    +L  +P  V+ L  +  +  A G F TA + ++G 
Sbjct: 1192 LRQDGTVWAWGFNDLGQLGDGTTTRRL--TPAQVQGLTGVTTI--AAGYFHTAAVRQDGT 1247

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
             +T+ +    +LG  T  +   P  + G      V  +AAGY + + +    +   V++ 
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATPVQVQGL---TGVSALAAGYAHTVVVGEDGT---VWAW 1301

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-- 287
            G   G +LG+GS TD   P  +E           +AAG +H   +  DG    WGWGR  
Sbjct: 1302 GNNSGTQLGNGSSTDRSTPVQVEAL----TGAFSLAAGRFHTVAMSPDG--AGWGWGRNN 1355

Query: 288  YGCLGHGNEECESVP 302
             G +G G       P
Sbjct: 1356 LGQVGDGTTADRPTP 1370



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 70/169 (41%), Gaps = 28/169 (16%)

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
           PV+ A    H   V QDG V  WG    G LG G       P  VQ +    AI  A G 
Sbjct: 75  PVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSP--VQVMTGATAI--AAGI 130

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ--I 378
           Y T   S+DG V+++G   S  LG     DG              TS+++ +   VQ   
Sbjct: 131 YHTVAASQDGTVWTWGRNSSGQLG-----DG--------------TSIQRFSPVQVQGLT 171

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +T       H+ AL + G ++ +G    GQLG       T+R  P +V
Sbjct: 172 GVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGD---GTSTQRLTPVQV 217


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 159/311 (51%), Gaps = 26/311 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  +AG  +S+A+   G ++++G N  G LGH   T+ E  P P+ +L G++I+QAA G 
Sbjct: 44  SAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGG 103

Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAI 156
              + + D G+ YA+G + +G    E E    GT+     + +PQ   +LK + V Q A 
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRC-ALK-LKVQQVAA 161

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 215
           G   + VL++EG V+T+        G    P D++       ++ +  V+ IA G  + L
Sbjct: 162 GGTHSVVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNL 213

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL+       +++ G    G+LG G       P  +E    L+L  V +AAG WH+  + 
Sbjct: 214 ALS---EDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSL--VDIAAGGWHSTALT 268

Query: 276 QDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           +DG V  WG G +G LG G+++    VP  VQ L+    + V+ G   +  ++ DG ++S
Sbjct: 269 KDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFS 328

Query: 335 FGCGESASLGH 345
           +G G+   LG+
Sbjct: 329 YGRGDHGRLGY 339



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 181/379 (47%), Gaps = 44/379 (11%)

Query: 64  VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           V ++GS   GQLG  G  E++W  R + +L    +    AG+  ++ I D G+++ +G +
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDWAHR-VAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWN 68

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
             G   +  + TK  +SP  VE+L  + +VQAAIG +    +  +GR Y  +WG +    
Sbjct: 69  QRGTLGHPPE-TKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAY--AWGGNEYGQ 125

Query: 183 HHTEPNDVE----------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
              EP   E          P P    L+ + V Q+AAG  + + L  +     V++    
Sbjct: 126 CGEEPERKEDGTRALRRDIPTPQRCALK-LKVQQVAAGGTHSVVLTQEGH---VWT---- 177

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
            G     G       P  ++  + +    +++A GA+H   + +D  +  WG   YG LG
Sbjct: 178 WGQPWPPGDIKQISTPVRVQGLEKV----MMIAVGAFHNLALSEDAVLWAWGNNEYGQLG 233

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G+ +  S P  V+ L+ +  + +A G + +  +++DG+VY++G GE   LG        
Sbjct: 234 IGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGF------- 286

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           G+  ++ + P  V  L    E +VQ+S   +     H+ ALT  G+++++G GD G+LG 
Sbjct: 287 GDDKSSHMVPLKVQLLD--GEDIVQVSCGGT-----HSVALTSDGRIFSYGRGDHGRLGY 339

Query: 413 ELVNNQTERGNPERVDIDL 431
                +   G+P  V ++L
Sbjct: 340 ---GRKVTTGHPMEVPLNL 355



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 4/157 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A++   V++++G+N  GQLG G T+   +P  +  L G+ ++  AAG   +  ++  
Sbjct: 211 HNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKD 270

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+VYA+G+   G   +G   +  +  P  V+ L    +VQ + G   +  L+ +GR++++
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMV-PLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSY 329

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
             G+  RLG+  +      HP+   L N+P  + +AG
Sbjct: 330 GRGDHGRLGYGRKVT--TGHPMEVPL-NLPPPKTSAG 363


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 170/356 (47%), Gaps = 34/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    P  I       + Q A G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           + + +  + +   +    P L+  L++  ++Q   G+  +  LS  G+V   SWG++   
Sbjct: 67  NDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH T+   V+   ++  L    VVQIA G  + LAL    S   +YS G  + G+LG 
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177

Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
            S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              S P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH           
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           +N + P++V  L  +   + Q++  N      HT AL  S G++YAFG G  GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 21/306 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP  I  LQ   IIQ   G+  
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +SD GQV ++G +  G+  +     ++V  P++V  L    VVQ A GN  +  L+ 
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
            G +Y  SWG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G 
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330

Query: 339 ESASLG 344
            S  LG
Sbjct: 331 SSGQLG 336



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 94  QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV     +T    P  + +L  I +   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  +  
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GRV 
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V Q+A G+ + L L    +   VY+ G     +LGH   T  K P LI + Q  +   + 
Sbjct: 42  VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
           +  G+ H+  +   G+V +WG    G LGH  ++E   +PKVV+ L     + +A G+  
Sbjct: 95  ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  ++  G++YS+G      LG N+  D     H N   P  +T+L       + I L  
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDL---THCNY--PLRLTTL-------LGIPLAA 202

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                 H+F +++SG ++ +G  + GQLG+   N++T R  P ++
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 244



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GRVY F  G+  +LG  +  + + P  ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   Y  LGH  +     P ++  L D   I +  G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH             V  P++V  L  V + VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCGEL 164

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 20/347 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G      VT +G V++ G  + G+LG G+ E    P  I S+Q + I Q +  AG 
Sbjct: 1444 QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGG 1503

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S+ G+VY++G+   G+  +G + +  +  P+++ESL+   +V+ A G   +A +
Sbjct: 1504 KHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATGGSHSAAI 1561

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+  L++  VV +A G      L C   G 
Sbjct: 1562 NATGGLYTWGKGRYGRLGHEDSEDQLKPK-LVNALKDNLVVDVACGNGDAQTL-CITEGT 1619

Query: 225  ----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                 V+S G G  GKLG G     K P +I+   L+      VA G+  +  + + G V
Sbjct: 1620 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIID--TLMGKHITHVACGSQFSLALSKAGGV 1677

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             TWG G Y  LGHG++E    PK++++L  +K + V+ G        ++GDVY++G  + 
Sbjct: 1678 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1737

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
              +G       Q         P+LV +L+  +   V     +++ W+
Sbjct: 1738 GQIGDGTTQATQ--------IPRLVAALQGHHISHVSCGSAHTVAWS 1776



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 173/358 (48%), Gaps = 31/358 (8%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G ++ +G N  GQLG     +   P P  SL  ++ IQ   G      ++  G+V+A G 
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1466

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+   + V  P L+ES++++ + Q ++  G      LS EG VY++  G D 
Sbjct: 1467 GAGG--RLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDG 1524

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH    +   P  ++ +L    +V++A G  +  + A   +G  +Y+ G G  G+LGH
Sbjct: 1525 KLGHGNRSSLDHPR-IIESLRGDLIVKVATGGSH--SAAINATG-GLYTWGKGRYGRLGH 1580

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----GQDGRVCTWGW--GRYGCLGH 293
                D+  P+L+   +  NL  V VA G   A  +    G  G    W W  G YG LG 
Sbjct: 1581 EDSEDQLKPKLVNALK-DNLV-VDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1638

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G  +   VP ++  L      HVA G   +  +S+ G VY++G G+   LGH +      
Sbjct: 1639 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGS------ 1692

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +V  P+L+ SL+ +  +VV++S+      + H  A  ++G +Y +G  D+GQ+G
Sbjct: 1693 --DEHVRRPKLIESLRGM--KVVEVSVG-----SLHCIAAVDNGDVYTWGDNDEGQIG 1741



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 9/304 (2%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQ 93
           +A +   R + +Q I G     AVT  G VY+ G ++SG+LG G  T    R   +   Q
Sbjct: 455 VASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQ 514

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            I+ +   +G    M ++  G VY++G    G+  +G +   L  +P+ +E+     +  
Sbjct: 515 PIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL--TPRKIETFPEKCIRD 572

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            + G+  +A +   G +YT+  G   RLGH      ++P P+   L    VVQ+A G   
Sbjct: 573 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRD 631

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
              L     G+ VYS G G  GKLG G       P+ +E+   L+ Q VV +  GA  + 
Sbjct: 632 AQTLCLTQDGL-VYSWGDGDFGKLGRGGSDGCCVPKPVER---LSGQDVVKIECGAQFSL 687

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            + + G V TWG G Y  LGHG+++    P+VV+ L + K + VA G      V+E G V
Sbjct: 688 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 747

Query: 333 YSFG 336
           +++G
Sbjct: 748 FAWG 751



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 166/358 (46%), Gaps = 40/358 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+ +G N   QLG     +   P   + LQ +++ Q   G+     ++  G+VYA G+ +
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 491

Query: 124 FGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
            G    G     V     V  PQ ++ L          G      L+ +G VY++  G +
Sbjct: 492 SGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEE 545

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            +LGH +  + + P      +E  P   +  I+ G  +  A+    S   +Y+ G G+ G
Sbjct: 546 GKLGHGSRADALTPR----KIETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYG 598

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 293
           +LGHG+      P+ ++   L   Q V VA G+  A    + QDG V +WG G +G LG 
Sbjct: 599 RLGHGNNHTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 656

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G  +   VPK V+ L+    + +  G   +  +S  G V+++G G+   LGH +      
Sbjct: 657 GGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS------ 710

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           ++H  V  PQ+V  L++   +VV +++        H  A+TE G+++A+G  D GQ G
Sbjct: 711 DQH--VRRPQVVEGLRE--HKVVDVAVG-----ALHCLAVTEGGQVFAWGDNDHGQQG 759



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H++A+T  G VYS+G    G+LGHG+  +   PR I +     I   + G+  +  
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 582

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
           I  +G +Y +G   +G   +G   T L   P+ V++L    VVQ A G  +  T  L+++
Sbjct: 583 IGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQD 640

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VY++  G+  +LG         P P +  L    VV+I  G  + LAL+    G+ V+
Sbjct: 641 GLVYSWGDGDFGKLGRGGSDGCCVPKP-VERLSGQDVVKIECGAQFSLALS--RCGL-VW 696

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHGS    + P+++E   L   + V VA GA H   V + G+V  WG   
Sbjct: 697 TWGKGDYFRLGHGSDQHVRRPQVVE--GLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 754

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           +G  G+G       P  VQ L  VK   +A G
Sbjct: 755 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 786



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 121/258 (46%), Gaps = 29/258 (11%)

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVE-----PHPLLGTLENIPVVQIAAGYCYLLAL 217
             LS  G    F WG++ R G    P   +     P P L  L+ I   Q+  G   L  +
Sbjct: 1400 TLSWVGSGSIFGWGHNHR-GQLGGPEGAKVKIPIPCPSLAALKPI---QLVGGEQTLFTV 1455

Query: 218  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
              +     V++ G G GG+LG GS      P LIE  Q +++  V V AG  H   +  +
Sbjct: 1456 TGEGK---VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1512

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            G V +WG G  G LGHGN      P+++++L     + VATG   +  ++  G +Y++G 
Sbjct: 1513 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1572

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-- 395
            G    LGH    D         L P+LV +LK  +  VV ++  N    +A T  +TE  
Sbjct: 1573 GRYGRLGHEDSEDQ--------LKPKLVNALK--DNLVVDVACGNG---DAQTLCITEGT 1619

Query: 396  --SGKLYAFGAGDKGQLG 411
              S  ++++G GD G+LG
Sbjct: 1620 GGSSVVWSWGDGDYGKLG 1637



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)

Query: 256  LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
            L  L+P+ +  G      V  +G+V   G+G  G LG G+ E  ++P +++++  V    
Sbjct: 1437 LAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1496

Query: 316  VAT--GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
            V+   G      +S +G+VYS+G G    LGH       GNR +++  P+++ SL+   +
Sbjct: 1497 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGH-------GNR-SSLDHPRIIESLR--GD 1546

Query: 374  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             +V+++   S     H+ A+  +G LY +G G  G+LG E   +Q
Sbjct: 1547 LIVKVATGGS-----HSAAINATGGLYTWGKGRYGRLGHEDSEDQ 1586



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H +AVT  G V+++G N  GQ G+G T    +P  ++ L+G++I + A G+  ++  
Sbjct: 734 GALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793

Query: 111 SDAGQ 115
           +D   
Sbjct: 794 ADTSH 798


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 20/347 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
            Q + G      VT +G V++ G  + G+LG G+ E    P  I S+Q + I Q +  AG 
Sbjct: 1443 QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGG 1502

Query: 106  -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +S+ G+VY++G+   G+  +G + +  +  P+++ESL+   +V+ A G   +A +
Sbjct: 1503 KHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATGGSHSAAI 1560

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +YT+  G   RLGH    + ++P  L+  L++  VV +A G      L C   G 
Sbjct: 1561 NATGGLYTWGKGRYGRLGHEDSEDQLKPK-LVNALKDNLVVDVACGNGDAQTL-CITEGT 1618

Query: 225  ----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                 V+S G G  GKLG G     K P +I+   L+      VA G+  +  + + G V
Sbjct: 1619 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIID--TLMGKHITHVACGSQFSLALSKAGGV 1676

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             TWG G Y  LGHG++E    PK++++L  +K + V+ G        ++GDVY++G  + 
Sbjct: 1677 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1736

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
              +G       Q         P+LV +L+  +   V     +++ W+
Sbjct: 1737 GQIGDGTTQATQ--------IPRLVAALQGHHISHVSCGSAHTVAWS 1775



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 173/358 (48%), Gaps = 31/358 (8%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G ++ +G N  GQLG     +   P P  SL  ++ IQ   G      ++  G+V+A G 
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1465

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             + G    G+   + V  P L+ES++++ + Q ++  G      LS EG VY++  G D 
Sbjct: 1466 GAGG--RLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDG 1523

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH    +   P  ++ +L    +V++A G  +  + A   +G  +Y+ G G  G+LGH
Sbjct: 1524 KLGHGNRSSLDHPR-IIESLRGDLIVKVATGGSH--SAAINATG-GLYTWGKGRYGRLGH 1579

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----GQDGRVCTWGW--GRYGCLGH 293
                D+  P+L+   +  NL  V VA G   A  +    G  G    W W  G YG LG 
Sbjct: 1580 EDSEDQLKPKLVNALK-DNLV-VDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1637

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G  +   VP ++  L      HVA G   +  +S+ G VY++G G+   LGH +      
Sbjct: 1638 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGS------ 1691

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +V  P+L+ SL+ +  +VV++S+      + H  A  ++G +Y +G  D+GQ+G
Sbjct: 1692 --DEHVRRPKLIESLRGM--KVVEVSVG-----SLHCIAAVDNGDVYTWGDNDEGQIG 1740



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 9/304 (2%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQ 93
           +A +   R + +Q I G     AVT  G VY+ G ++SG+LG G  T    R   +   Q
Sbjct: 454 VASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQ 513

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            I+ +   +G    M ++  G VY++G    G+  +G +   L  +P+ +E+     +  
Sbjct: 514 PIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL--TPRKIETFPEKCIRD 571

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            + G+  +A +   G +YT+  G   RLGH      ++P P+   L    VVQ+A G   
Sbjct: 572 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRD 630

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
              L     G+ VYS G G  GKLG G       P+ +E+   L+ Q VV +  GA  + 
Sbjct: 631 AQTLCLTQDGL-VYSWGDGDFGKLGRGGSDGCCVPKPVER---LSGQDVVKIECGAQFSL 686

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            + + G V TWG G Y  LGHG+++    P+VV+ L + K + VA G      V+E G V
Sbjct: 687 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 746

Query: 333 YSFG 336
           +++G
Sbjct: 747 FAWG 750



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 166/358 (46%), Gaps = 40/358 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+ +G N   QLG     +   P   + LQ +++ Q   G+     ++  G+VYA G+ +
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 490

Query: 124 FGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
            G    G     V     V  PQ ++ L          G      L+ +G VY++  G +
Sbjct: 491 SGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEE 544

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            +LGH +  + + P      +E  P   +  I+ G  +  A+    S   +Y+ G G+ G
Sbjct: 545 GKLGHGSRADALTPR----KIETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYG 597

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 293
           +LGHG+      P+ ++   L   Q V VA G+  A    + QDG V +WG G +G LG 
Sbjct: 598 RLGHGNNHTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 655

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G  +   VPK V+ L+    + +  G   +  +S  G V+++G G+   LGH +      
Sbjct: 656 GGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS------ 709

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           ++H  V  PQ+V  L++   +VV +++        H  A+TE G+++A+G  D GQ G
Sbjct: 710 DQH--VRRPQVVEGLRE--HKVVDVAVG-----ALHCLAVTEGGQVFAWGDNDHGQQG 758



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H++A+T  G VYS+G    G+LGHG+  +   PR I +     I   + G+  +  
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 581

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
           I  +G +Y +G   +G   +G   T L   P+ V++L    VVQ A G  +  T  L+++
Sbjct: 582 IGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQD 639

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VY++  G+  +LG         P P +  L    VV+I  G  + LAL+    G+ V+
Sbjct: 640 GLVYSWGDGDFGKLGRGGSDGCCVPKP-VERLSGQDVVKIECGAQFSLALS--RCGL-VW 695

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHGS    + P+++E   L   + V VA GA H   V + G+V  WG   
Sbjct: 696 TWGKGDYFRLGHGSDQHVRRPQVVE--GLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 753

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           +G  G+G       P  VQ L  VK   +A G
Sbjct: 754 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 785



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 121/258 (46%), Gaps = 29/258 (11%)

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVE-----PHPLLGTLENIPVVQIAAGYCYLLAL 217
             LS  G    F WG++ R G    P   +     P P L  L+ I   Q+  G   L  +
Sbjct: 1399 TLSWVGSGSIFGWGHNHR-GQLGGPEGAKVKIPIPCPSLAALKPI---QLVGGEQTLFTV 1454

Query: 218  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
              +     V++ G G GG+LG GS      P LIE  Q +++  V V AG  H   +  +
Sbjct: 1455 TGEGK---VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1511

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            G V +WG G  G LGHGN      P+++++L     + VATG   +  ++  G +Y++G 
Sbjct: 1512 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1571

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-- 395
            G    LGH    D         L P+LV +LK  +  VV ++  N    +A T  +TE  
Sbjct: 1572 GRYGRLGHEDSEDQ--------LKPKLVNALK--DNLVVDVACGNG---DAQTLCITEGT 1618

Query: 396  --SGKLYAFGAGDKGQLG 411
              S  ++++G GD G+LG
Sbjct: 1619 GGSSVVWSWGDGDYGKLG 1636



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)

Query: 256  LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
            L  L+P+ +  G      V  +G+V   G+G  G LG G+ E  ++P +++++  V    
Sbjct: 1436 LAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1495

Query: 316  VAT--GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
            V+   G      +S +G+VYS+G G    LGH       GNR +++  P+++ SL+   +
Sbjct: 1496 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGH-------GNR-SSLDHPRIIESLR--GD 1545

Query: 374  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             +V+++   S     H+ A+  +G LY +G G  G+LG E   +Q
Sbjct: 1546 LIVKVATGGS-----HSAAINATGGLYTWGKGRYGRLGHEDSEDQ 1585



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H +AVT  G V+++G N  GQ G+G T    +P  ++ L+G++I + A G+  ++  
Sbjct: 733 GALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792

Query: 111 SDAGQ 115
           +D   
Sbjct: 793 ADTSH 797


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 170/356 (47%), Gaps = 34/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    P  I       + Q A G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           + + +  + +   +    P L+  L++  ++Q   G+  +  LS  G+V   SWG++   
Sbjct: 67  NDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH T+   V+   ++  L    VVQIA G  + LAL    S   +YS G  + G+LG 
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177

Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
            S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              S P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH           
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           +N + P++V  L  +   + Q++  N      HT AL  S G++YAFG G  GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 21/306 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP  I  LQ   IIQ   G+  
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +SD GQV ++G +  G+  +     ++V  P++V  L    VVQ A GN  +  L+ 
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
            G +Y  SWG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G 
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330

Query: 339 ESASLG 344
            S  LG
Sbjct: 331 SSGQLG 336



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 94  QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV     +T    P  + +L  I +   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  +  
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GRV 
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V Q+A G+ + L L    +   VY+ G     +LGH   T  K P LI + Q  +   + 
Sbjct: 42  VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
           +  G+ H+  +   G+V +WG    G LGH  ++E   +PKVV+ L     + +A G+  
Sbjct: 95  ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  ++  G++YS+G      LG N+  D     H N   P  +T+L       + I L  
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDL---THCNY--PLRLTTL-------LGIPLAA 202

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                 H+F +++SG ++ +G  + GQLG+   N++T R  P ++
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 244



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GRVY F  G+  +LG  +  + + P  ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   Y  LGH  +     P ++  L D   I +  G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH             V  P++V  L  V + VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCGEL 164

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 180/375 (48%), Gaps = 34/375 (9%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            V ++GS   GQLG G  EEE   R + +L  + +    AG+  ++ I   G+++ +G +
Sbjct: 12  AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
             G   +  + TK  +SP  V++L  + +VQAAIG +    +  +GR Y +      + G
Sbjct: 72  QRGTLGHPPE-TKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 130

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
              E  +     L     +IP+ Q  A    +  +A   +   V +       + GH   
Sbjct: 131 EEAERKEDGTRAL---RRDIPIPQRCAPKLKVRQVAAGGTHSVVLT-------QDGHVWT 180

Query: 243 TDEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
             +  P     ++    ++  L+ V V+A GA+H   + +DG +  WG   YG LG G+ 
Sbjct: 181 WGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDT 240

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           +  S P  V+ L+D+  + +A G + +  ++++G+VY++G GE   LG        G+  
Sbjct: 241 QPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-------GDDK 293

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ++ + PQ V  L    E ++Q+S   +     H+ ALT  G+++++G GD G+LG     
Sbjct: 294 SSHMVPQKVELL--AGEDIIQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---G 343

Query: 417 NQTERGNPERVDIDL 431
            +   G+P  V IDL
Sbjct: 344 RKVTTGHPMEVPIDL 358



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 28/312 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  +AG  +S+A+ + G ++++G N  G LGH   T+ E  P P+ +L G+ I+QAA G 
Sbjct: 47  SAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106

Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 158
              + + D G+ YA+G + +G    EAE    GT+ +    P        + V Q A G 
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGG 166

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
             + VL+++G V+T+        G    P D++    P  + G LEN+ V+ + A     
Sbjct: 167 THSVVLTQDGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVKVIAVGA----F 213

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             LA    G+ +++ G    G+LG G       P  +E    L+L  V +AAG WH+  +
Sbjct: 214 HNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTAL 270

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
            ++G V  WG G +G LG G+++    VP+ V+ L     I V+ G   +  ++ DG ++
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMF 330

Query: 334 SFGCGESASLGH 345
           S+G G+   LG+
Sbjct: 331 SYGRGDHGRLGY 342



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+T  G+++++G+N  GQLG G T+   +P  +  L  + ++  AA
Sbjct: 203 ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 262

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  ++  G+VYA+G+   G   +G   +  +  PQ VE L    ++Q + G   + 
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV-PQKVELLAGEDIIQVSCGGTHSV 321

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR++++  G+  RLG+
Sbjct: 322 ALTRDGRMFSYGRGDHGRLGY 342


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   L+ +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ ++SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P  I +L    II  A 
Sbjct: 34  RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S  + + G+  T+  V  P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P  +  +LE IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 ARGQLG 328



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 236 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 294 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 413 ELVNNQTERGNPERV 427
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L    VAAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D         + P+ V  L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMND--------EVNPRRV--LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N  +LG   E +   P H  L  L    VV I+ G  +   L    SG  V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
            G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 288 YGCLGHG---NEECESVPK 303
            G LG G   N +C S  K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P  I +L    II  A 
Sbjct: 34  RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G  + G+  T+  V  P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P  +  +LE IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 ARGQLG 328



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 236 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 294 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 413 ELVNNQTERGNPERV 427
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L    VAAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D         + P+ V  L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMND--------EVNPRRV--LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N  +LG   E +   P H  L  L    VV I+ G  +   L    SG  V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
            G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 288 YGCLGHG---NEECESVPK 303
            G LG G   N +C S  K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 159/336 (47%), Gaps = 33/336 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++AVT  G V S+G  + GQLG G   ++  P  +++L   R+   A G   T ++
Sbjct: 78  GGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVV 137

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D G V  +GK + G+   G   + L+  P+ V +L N  + Q A G   T  LS  G +
Sbjct: 138 TDVGLVMCWGKGNSGQLGQGDWTSSLL--PRTVSTLYNEKIRQIACGMAHTLALSVNGEI 195

Query: 171 YTFSWGNDARLG---HHTEPNDV-EPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           Y++  G D +LG   H  E  DV  P  + +   E    +   + +C  +   C+     
Sbjct: 196 YSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCR----- 250

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++S G G  G+LG G       P ++ +  + NL+   VAAG  H AV+  +G + T G 
Sbjct: 251 LFSWGLGADGRLGLGDSESRFSPTVVRR-SIENLRICYVAAGGHHTAVLSDNGEIFTCGR 309

Query: 286 GRYGCLGHGNEECESVPKVVQA------------LNDVKAIHVATGDYTTFVVSEDGDVY 333
           G YG LGHG+ + +   K  +A            L D K I  A GD  T V+S  G+V+
Sbjct: 310 GSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVF 369

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           ++G  E   LG        G   AN  +P  +TSL+
Sbjct: 370 AWGAAEDGQLGTG------GTEGAN--SPVELTSLR 397



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 41/364 (11%)

Query: 73  GQLGHGTTEEEWRPRPIR-----------------SLQGIRIIQAAAGAGRTMLISDAGQ 115
           G+LGHG T  +  P+ +R                 SL G   I  A G   T+ +++ G+
Sbjct: 33  GRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGA--IYVACGGHHTVAVTEDGE 90

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V ++G  +  E + G       T P +V++L N  V   A G + TAV++  G V  +  
Sbjct: 91  VVSWGWGN--EGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGK 148

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
           GN  +LG     + + P  +  TL N  + QIA G  + LAL+       +YS G G  G
Sbjct: 149 GNSGQLGQGDWTSSLLPRTV-STLYNEKIRQIACGMAHTLALSVNGE---IYSWGAGADG 204

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG G   +E       Q   ++ +     +A G+ H   +  D R+ +WG G  G LG 
Sbjct: 205 QLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGL 264

Query: 294 GNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G+ E    P VV+ ++ +++  +VA G + T V+S++G++++ G G    LGH   AD Q
Sbjct: 265 GDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGD-ADPQ 323

Query: 353 GNRHANVLTPQLVTSLKQ--VNERVVQI---SLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                  LT +   +L+   +   +VQ+    +  +   + HT  ++ +G+++A+GA + 
Sbjct: 324 -------LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAED 376

Query: 408 GQLG 411
           GQLG
Sbjct: 377 GQLG 380



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 31/216 (14%)

Query: 230 GCGLGGKLGHG---SRTDEKHPRLIEQF-----------QLLNLQPVVVAAGAWHAAVVG 275
           G G  G+LGHG   S+ + K  R  ++F           + LN   + VA G  H   V 
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLN-GAIYVACGGHHTVAVT 86

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           +DG V +WGWG  G LG GN   ++VP VV+AL++ +   VA G Y T VV++ G V  +
Sbjct: 87  EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCW 146

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G G S  L       GQG+  +++L P+ V++L   NE++ QI+        AHT AL+ 
Sbjct: 147 GKGNSGQL-------GQGDWTSSLL-PRTVSTL--YNEKIRQIACG-----MAHTLALSV 191

Query: 396 SGKLYAFGAGDKGQLGIELVNNQT-ERGNPERVDID 430
           +G++Y++GAG  GQLG+     +T +   P++V +D
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVD 227



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 113/253 (44%), Gaps = 32/253 (12%)

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPV---------------VQIAAGYCYLLALAC 219
           WG   RLGH    + +EP  L    +  PV               + +A G  + +A+  
Sbjct: 29  WGEFGRLGHGDTLSQLEPKRLRFD-KRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT- 86

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
                 V S G G  G+LG G+  D+  P +++   L N +   VA G +H AVV   G 
Sbjct: 87  --EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRVCGVACGYYHTAVVTDVGL 142

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG G  G LG G+     +P+ V  L + K   +A G   T  +S +G++YS+G G 
Sbjct: 143 VMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGA 202

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG   +   Q    A+V TPQ V   ++     +          + H  A+T+  +L
Sbjct: 203 DGQLG---VGKHQ-EETADVATPQKVRVDEEEKFEFIACG-------SRHCMAITDDCRL 251

Query: 400 YAFGAGDKGQLGI 412
           +++G G  G+LG+
Sbjct: 252 FSWGLGADGRLGL 264



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 36/250 (14%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAA 102
           Q   G  H++A++  G +YS+G+ + GQLG G  +EE      P+ +R  +  +    A 
Sbjct: 178 QIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIAC 237

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-ESLKNIFVVQAAIGNFFT 161
           G+   M I+D  +++++G  + G    G   ++   SP +V  S++N+ +   A G   T
Sbjct: 238 GSRHCMAITDDCRLFSWGLGADGRLGLGDSESRF--SPTVVRRSIENLRICYVAAGGHHT 295

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT---------------LENIPVVQ 206
           AVLS  G ++T   G+  +LGH     D +P   L                 L +  +++
Sbjct: 296 AVLSDNGEIFTCGRGSYGQLGH----GDADPQLTLKKARALRHGCLLLHIVQLRDKKIIK 351

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 264
            A G  + L ++   +   V++ G    G+LG G       P      +L +L+ +V  V
Sbjct: 352 AACGDTHTLVIS---TAGEVFAWGAAEDGQLGTGGTEGANSP-----VELTSLRGLVGDV 403

Query: 265 AAGAWHAAVV 274
           + G  H+A V
Sbjct: 404 SCGLVHSAAV 413


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2943 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3002

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V
Sbjct: 3003 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3061

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G
Sbjct: 3062 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3117

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3118 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3175

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH + 
Sbjct: 3176 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3234

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T+SG++YA+G  D G
Sbjct: 3235 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3280

Query: 409  QLG 411
            Q G
Sbjct: 3281 QQG 3283



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 3988 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4047

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            ++ AG +Y +GK  +G   +     +L   P+LVE+L+   VV  A   G+  T  L+ +
Sbjct: 4048 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4105

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4106 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4161

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG   
Sbjct: 4162 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4219

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 4220 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4259



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 21/280 (7%)

Query: 134  TKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
            T+ V++P L+ES++++F+ + A+  G      LS EG VY++    D +LGH        
Sbjct: 3964 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR 4023

Query: 192  PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
            P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+
Sbjct: 4024 PR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4079

Query: 252  EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            E  Q   +  +   +G      +  D  V +WG G YG LG G  +   VP  + +L  +
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139

Query: 312  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
              + V  G   +  +++ G VY++G G+   LGH +          +V  P+ V  L+  
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ-- 4189

Query: 372  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4190 GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4224



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 165/340 (48%), Gaps = 18/340 (5%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGK 121
            +Y+ G  + G+LG G TE    P  + S+Q + I + A  +G    + +S  G+VY++G+
Sbjct: 3948 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4007

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
               G+  +G +       P+++ESL+ I VV  A G   +A ++  G +YT+  G   RL
Sbjct: 4008 AEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4065

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    + ++P  L+  L+   VV IA G      L C      V+S G G  GKLG G 
Sbjct: 4066 GHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDDTVWSWGDGDYGKLGRGG 4123

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
                K P  I+   L  L  V V  G+  +  + + G V TWG G Y  LGHG+++    
Sbjct: 4124 SDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4181

Query: 302  PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
            P+ VQ L   K I +ATG       +EDG+VY++G  +   LG     DG  N    +  
Sbjct: 4182 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-----DGTTN---AIQR 4233

Query: 362  PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            P+LV +L+      V     +++ W+    A   +GKL A
Sbjct: 4234 PRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4271



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 2986 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3045

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 3046 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3102

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 3103 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3161

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 3162 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3217

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3218 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3275



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+IQ A G+   +T+
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3159

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++ G
Sbjct: 3160 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3217

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  VY+
Sbjct: 3218 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3273

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G    G+ G+G+ T  + P L++  +
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3300



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 3195 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3249

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3250 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3307

Query: 155  AIGN 158
            A G+
Sbjct: 3308 ACGS 3311


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 23/290 (7%)

Query: 65  YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG----RTMLISDAGQVYAFG 120
           +S+G N+ G LG GTT+    P PI +LQG+ ++  A G G     +  +++ GQVY +G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
               G+  +G   ++ +  P+L+  L++  +V+ A G+  T V+S+ G V+ + WG+  +
Sbjct: 61  SGKSGQLGHG--DSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LG  +  N  +P  +  +L+ + V ++A G  +   +    SG  VY+ G G+ G+LGHG
Sbjct: 119 LGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVT--ESGH-VYTWGWGVNGQLGHG 174

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-DGRVCTWGWGRYGCLGHGNEEC- 298
               +  P  +++   + +    +A G  H  VV + D  V +WGW  YG LGHG  +  
Sbjct: 175 DDASQSRPMYVKKLHGIYVS--TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIF 232

Query: 299 ----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
                  P+ ++ L       +A G   T  +S  GDVY+FG G+   LG
Sbjct: 233 GGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 30/293 (10%)

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF----FTAVLSREGRVYTFSWGNDARL 181
           +   G+  T  V SP  + +L+ + VV  A G       +A ++ +G+VYT+  G   +L
Sbjct: 8   DGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQL 67

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           GH    N V P  ++G L++ P+V++A G  + + ++   +G+ V++ G G  G+LG GS
Sbjct: 68  GHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVS--KAGL-VFAWGWGHFGQLGVGS 123

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
             +   P  ++   L  ++   VA G+ H AVV + G V TWGWG  G LGHG++  +S 
Sbjct: 124 THNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSR 181

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSE-DGDVYSFGCGESASLGHNA--IADGQGNRHAN 358
           P  V+ L+ +    +A G   T VVSE D  V+S+G  E   LGH    I  G  NR   
Sbjct: 182 PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNR--- 238

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +P+ +  L+Q+               +++T AL+  G +YAFG G  GQLG
Sbjct: 239 --SPRPIKDLQQIACG------------SSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 125/244 (51%), Gaps = 17/244 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS AVT +G VY++GS  SGQLGHG ++    PR I  LQ   I++ A G+  T+++S A
Sbjct: 46  HSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKA 105

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G   FG  + GV  T     P  V SL  + V + A G+  TAV++  G VYT+
Sbjct: 106 GLVFAWGWGHFG--QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTW 163

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            WG + +LGH  + +   P   +  L  I V  +A G  + + ++      AV+S G   
Sbjct: 164 GWGVNGQLGHGDDASQSRPM-YVKKLHGIYVSTLACGLAHTVVVS--EVDRAVFSWGWDE 220

Query: 234 GGKLGHGSR-----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G+LGHG          + PR I+  Q        +A G+ +   +   G V  +GWG+ 
Sbjct: 221 YGQLGHGGWDIFGGNKNRSPRPIKDLQQ-------IACGSSYTLALSSRGDVYAFGWGKD 273

Query: 289 GCLG 292
           G LG
Sbjct: 274 GQLG 277



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 19/195 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V+  G+V+++G    GQLG G+T     P  + SL G+++ + A G+  T ++
Sbjct: 95  GSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVV 154

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +++G VY +G    G+  +G   ++  + P  V+ L  I+V   A G   T V+S   R 
Sbjct: 155 TESGHVYTWGWGVNGQLGHGDDASQ--SRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRA 212

Query: 171 YTFSWGND--ARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
             FSWG D   +LGH          +  P P+        + QIA G  Y LAL+ +   
Sbjct: 213 -VFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIK------DLQQIACGSSYTLALSSRGD- 264

Query: 224 MAVYSVGCGLGGKLG 238
             VY+ G G  G+LG
Sbjct: 265 --VYAFGWGKDGQLG 277



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 19/143 (13%)

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG----DYTTFVVSEDGDVYSFGC 337
           +WG+   G LG G  +    P  + AL  +  + VA G    +  +  V+E G VY++G 
Sbjct: 2   SWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGS 61

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G+S  LGH    D Q     N++ P+L+  L+  +  +V+++  +     AHT  ++++G
Sbjct: 62  GKSGQLGH---GDSQ-----NLVLPRLIVGLQ--SNPIVEVACGS-----AHTVVVSKAG 106

Query: 398 KLYAFGAGDKGQLGIELVNNQTE 420
            ++A+G G  GQLG+   +N  +
Sbjct: 107 LVFAWGWGHFGQLGVGSTHNSND 129


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 180/375 (48%), Gaps = 34/375 (9%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            V ++GS   GQLG G  EEE   R + +L  + +    AG+  ++ I   G+++ +G +
Sbjct: 12  AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
             G   +  + TK  +SP  V++L  + +VQAAIG +    +  +GR Y +      + G
Sbjct: 72  QRGTLGHPPE-TKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 130

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
              E  +     L     +IP+ Q  A    +  +A   +   V +       + GH   
Sbjct: 131 EEAERKEDGTRALR---RDIPIPQGCAPKLKVRQVAAGGTHSVVLT-------QDGHVWT 180

Query: 243 TDEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
             +  P     ++    ++  L+ V V+A GA+H   + +DG +  WG   YG LG G+ 
Sbjct: 181 WGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDT 240

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           +  S P  V+ L+D+  + +A G + +  ++++G+VY++G GE   LG        G+  
Sbjct: 241 QPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-------GDDK 293

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ++ + PQ V  L    E ++Q+S   +     H+ ALT  G+++++G GD G+LG     
Sbjct: 294 SSHMVPQKVELL--AGEDIIQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---G 343

Query: 417 NQTERGNPERVDIDL 431
            +   G+P  V IDL
Sbjct: 344 RKVTTGHPMEVPIDL 358



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 28/312 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  +AG  +S+A+ + G ++++G N  G LGH   T+ E  P P+ +L G+ I+QAA G 
Sbjct: 47  SAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106

Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 158
              + + D G+ YA+G + +G    EAE    GT+ +    P        + V Q A G 
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGG 166

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
             + VL+++G V+T+        G    P D++    P  + G LEN+ V+ + A     
Sbjct: 167 THSVVLTQDGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVKVIAVGA----F 213

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             LA    G+ +++ G    G+LG G       P  +E    L+L  V +AAG WH+  +
Sbjct: 214 HNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTAL 270

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
            ++G V  WG G +G LG G+++    VP+ V+ L     I V+ G   +  ++ DG ++
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMF 330

Query: 334 SFGCGESASLGH 345
           S+G G+   LG+
Sbjct: 331 SYGRGDHGRLGY 342



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+T  G+++++G+N  GQLG G T+   +P  +  L  + ++  AA
Sbjct: 203 ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 262

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  ++  G+VYA+G+   G   +G   +  +  PQ VE L    ++Q + G   + 
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV-PQKVELLAGEDIIQVSCGGTHSV 321

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR++++  G+  RLG+
Sbjct: 322 ALTRDGRMFSYGRGDHGRLGY 342


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        RI     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 171/353 (48%), Gaps = 24/353 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  I VV +AAG  +    AC  +   +++ G G  G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4130

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L+E  Q   +  +   +G      +  D  V +WG G YG LG G  +  
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQGNRHAN 358
             VP  + +L  +  + V  G   +  +++ G VY++    +   LGH +          +
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGS--------DDH 4242

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4243 VRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4288



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V+ P   E L N+ VVQ A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+V
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH   
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3245

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3246 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3291

Query: 409  QLG 411
            Q G
Sbjct: 3292 QQG 3294



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV+SL  +
Sbjct: 449 LANLGVVQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         LS  G V+++  G+  RLGH       EP     L G      V
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 165/340 (48%), Gaps = 19/340 (5%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ I VV  A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4102

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ IA G     
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  I+   L  L  V V  G+  +  + 
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4218

Query: 276  QDGRVCTWGWGR-YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            + G V TW   R Y  LGHG+++    P+ VQ L   K I +ATG       +EDG+VY+
Sbjct: 4219 KSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4278

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
            +G  +   LG     DG  N    +  P+LV +L  K++N
Sbjct: 4279 WGDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4310



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 139/281 (49%), Gaps = 11/281 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S+G VYS+G    G+LGHG      RPR I SL+GI ++  AAG   +  
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4110

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I+ AG ++ +GK  +G   +G    +L   P+LVE+L+   V+  A   G+  T  L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P   + +L  + VV++  G  + +AL    SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4224

Query: 228  SVGCGLG-GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            +        +LGHGS    + PR ++  Q    + + +A G+ H     +DG V TWG  
Sbjct: 4225 TWQVFRDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDN 4282

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              G LG G       P++V AL   K   VA G   T   S
Sbjct: 4283 DEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4323



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ +V+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P++V+ L    V+Q A G  +  T  L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3284

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+++ G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHG+    ++P+L+E  +    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+    
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4006

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V 
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  ++  GD++++G G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   +++
Sbjct: 4127 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4173

Query: 402  FGAGDKGQLG 411
            +G GD G+LG
Sbjct: 4174 WGDGDYGKLG 4183



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + I++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY +GK       +G +  + V  P+L+E LK   V+  A G+     L+ +  
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318

Query: 155  AIGN 158
            A G+
Sbjct: 3319 ACGS 3322



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
           L NL  V VA       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 449 LANLGVVQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498

Query: 316 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 371
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+++++L  KQ 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKMISALSGKQA 550

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+EG 
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
              F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 F--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S  G+ + +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKEGEFFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+ +      +  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE---FFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++ +G  + +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   L+ +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ ++SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        RI     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 165/355 (46%), Gaps = 47/355 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTSPQL 142
           PR + SL G  +   A GA  ++ ++ AG+VYAFG D  GE +     T+L   V  P  
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPE 257

Query: 143 VESLKNIF--VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN---------- 188
           V +  N    V   A G    A ++  G +   SWGN+   +LG     +          
Sbjct: 258 VTATTNAMPRVATVACGQRHCAAVTTSGVL--LSWGNEEFGQLGQGPPRDSSSKGDAKSL 315

Query: 189 -----DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
                D    P L    ++    +A G  + LAL        V+S G G  G LGHG R 
Sbjct: 316 IRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGR---VFSFGRGAFGALGHGDRL 372

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           +   PRL++   L  +    +AAG  H+A +   GRV TWG G+YG LGH + +  S P 
Sbjct: 373 NCDVPRLVD--ALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPT 430

Query: 304 VVQALND--VKAIHVATGDYTTFVVSEDGD--VYSFGCGESASLGHNAIADGQGNRHANV 359
            VQAL+D  V+   +A G   T  ++  G   + ++G G S   G  A AD        V
Sbjct: 431 PVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATAD--------V 482

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
           LTP ++      +E+V QIS  +      H+ A+TE G +Y +GA  +GQLG EL
Sbjct: 483 LTPTIIDRALLGDEKVFQISAGSK-----HSVAVTEGGCVYTWGARTQGQLGHEL 532



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 22/261 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-----------------WRPRPIRSLQ 93
           G  H  AVT+ GV+ S+G+   GQLG G   +                    PR + S  
Sbjct: 274 GQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGH 333

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            ++    A GAG T+ ++  G+V++FG+ +FG   +G +    V  P+LV++L  + V Q
Sbjct: 334 -VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV--PRLVDALWGVGVAQ 390

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYC 212
            A G+  +A LS  GRVYT+  G    LGH    N   P P+    +  +   QIA G  
Sbjct: 391 IAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGD 450

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           + LA+A   SG+ + + G G  G  G G+  D   P +I++  L + +   ++AG+ H+ 
Sbjct: 451 HTLAIAGGGSGV-LLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSV 509

Query: 273 VVGQDGRVCTWGWGRYGCLGH 293
            V + G V TWG    G LGH
Sbjct: 510 AVTEGGCVYTWGARTQGQLGH 530



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 136/330 (41%), Gaps = 32/330 (9%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------PRPIRSLQGI- 95
           R+ +    G  HS+AVTS G VY+FG + SG+    +     R      P    +   + 
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPEVTATTNAMP 266

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV--------QGTKLV-------TSP 140
           R+   A G      ++ +G + ++G + FG+   G             L+         P
Sbjct: 267 RVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP 326

Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
           +LV S  ++     A G   T  L+  GRV++F  G    LGH    N   P  L+  L 
Sbjct: 327 RLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPR-LVDALW 384

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            + V QIAAG  +  +L+   SG  VY+ G G  G LGH    +   P  ++      ++
Sbjct: 385 GVGVAQIAAGDNHSASLSA--SGR-VYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVR 441

Query: 261 PVVVAAGAWHAAVV--GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHV 316
              +A G  H   +  G  G +  WG G  G  G G       P ++    L D K   +
Sbjct: 442 CEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQI 501

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           + G   +  V+E G VY++G      LGH 
Sbjct: 502 SAGSKHSVAVTEGGCVYTWGARTQGQLGHE 531



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 113/257 (43%), Gaps = 41/257 (15%)

Query: 185 TEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG--CGLGGKLGHGS 241
           +E  +  P P  + +L+   V  +A G  + +A+    S   VY+ G   G G  L   +
Sbjct: 190 SEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVT---SAGEVYAFGDCSGEGKALSAPT 246

Query: 242 RTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----- 294
           R  E      E     N  P V  VA G  H A V   G + +WG   +G LG G     
Sbjct: 247 RLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDS 306

Query: 295 ------------NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
                         +   +P++V +   VK   VA G   T  ++ +G V+SFG G   +
Sbjct: 307 SSKGDAKSLIRRRADASMMPRLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGA 365

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH       G+R  N   P+LV +L  V   V QI+  ++     H+ +L+ SG++Y +
Sbjct: 366 LGH-------GDR-LNCDVPRLVDALWGVG--VAQIAAGDN-----HSASLSASGRVYTW 410

Query: 403 GAGDKGQLGIELVNNQT 419
           G G  G LG   V+N++
Sbjct: 411 GRGKYGALGHRDVDNRS 427


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 167/341 (48%), Gaps = 27/341 (7%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           R  N     G  HS+    + V + +G    G+LG  T   +++P     ++  R+  A+
Sbjct: 85  RLGNVGVTCGLFHSVLFAEQDV-FVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMAS 141

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG    + +++ G VY +G  +FG   +G    +L+  P+L+E      +V  + G   T
Sbjct: 142 AGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELL--PRLLEGPWKDRIVHVSAGGSHT 199

Query: 162 AVLSREGRVYTFSWGND---ARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
           A ++  G +YT  WG D    RLGH   P+ ++      P      ++P+  +  G  + 
Sbjct: 200 AAVTESGELYT--WGRDEGEGRLGH-GNPDIMDEGALSRPTKVQALDVPIALVYCGGFFT 256

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    SG  ++S G     +LGHG+R +   P+++   + + L  V VA G +HAA +
Sbjct: 257 MALT--KSGQ-LWSWGGNANHELGHGTRANNWKPKVVAALEDVTL--VQVACGGFHAAAL 311

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            QDG+V TWG+G  G LGHG  E    P +V+A+ D    ++A G   T  ++E+GD+Y+
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYT 371

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
           +G      LG   + D Q       L P LV   + ++E+ 
Sbjct: 372 WGKNRDYQLGIPGLKDEQ-------LDPVLVQFPQALHEKT 405



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 157/330 (47%), Gaps = 51/330 (15%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAI----------GN----- 158
           +V+A+G+ + G+  +G + T+ +  P L+ +LK   F   A I          GN     
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKL--PVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 159 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLA 216
             F +VL  E  V+ +  G+  RLG  TE N  +P+        I  VQ+A AG  + +A
Sbjct: 94  GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPY----VNPRIKRVQMASAGGLHNIA 149

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   VY+ G G  G LGHGS   E  PRL+E      +  V V+AG  H A V +
Sbjct: 150 LTEVGN---VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRI--VHVSAGGSHTAAVTE 204

Query: 277 DGRVCTWGWGR-YGCLGHGN-----EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
            G + TWG     G LGHGN     E   S P  VQAL DV    V  G + T  +++ G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFFTMALTKSG 263

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++S+G   +  LGH       G R AN   P++V +L+ V   +VQ++         H 
Sbjct: 264 QLWSWGGNANHELGH-------GTR-ANNWKPKVVAALEDVT--LVQVACGGF-----HA 308

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            ALT+ GK+  +G G  GQLG   + N  E
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKE 338



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 45/376 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-----GIRIIQA-------------AAGAG 105
           V+++G  + GQ+GHG+ + E  P  I +L+     G+  IQ                G  
Sbjct: 37  VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLF 96

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++L ++   V+ +GK   G    G+        P +   +K   V  A+ G      L+
Sbjct: 97  HSVLFAEQ-DVFVWGKGDGGR--LGIDTEFNQYKPYVNPRIKR--VQMASAGGLHNIALT 151

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G VYT+ +G    LGH +   ++ P  L G  ++  +V ++AG  +  A+    SG  
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHTAAVT--ESG-E 207

Query: 226 VYSVGCGLG-GKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           +Y+ G   G G+LGHG+    DE       + Q L++   +V  G +    + + G++ +
Sbjct: 208 LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWS 267

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG      LGHG       PKVV AL DV  + VA G +    +++DG V ++G G +  
Sbjct: 268 WGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQ 327

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH  + +G+         P +V       E +   + T      A T A+TE+G LY +
Sbjct: 328 LGHGTLENGK--------EPAIV-------EAMADKTCTYIACGPAWTAAITENGDLYTW 372

Query: 403 GAGDKGQLGIELVNNQ 418
           G     QLGI  + ++
Sbjct: 373 GKNRDYQLGIPGLKDE 388



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 44/236 (18%)

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 257
           GY      + +P+ + V++ G G  G++GHGS   EK P LI   +L             
Sbjct: 21  GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80

Query: 258 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
                L  V V  G +H+ +  +   V  WG G  G LG   E  +  P V   +  V+ 
Sbjct: 81  PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
              + G      ++E G+VY++G G   +LGH +        +   L P+L+       +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS--------YERELLPRLLEG--PWKD 187

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD-KGQLGIELVNNQTERGNPERVD 428
           R+V +S   S     HT A+TESG+LY +G  + +G+LG          GNP+ +D
Sbjct: 188 RIVHVSAGGS-----HTAAVTESGELYTWGRDEGEGRLG---------HGNPDIMD 229


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 482 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 530

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 531 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 586

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 587 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 646

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+++G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 647 KVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 698

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 699 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 733



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 153/331 (46%), Gaps = 39/331 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P     L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 530

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 531 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 590

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 591 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 647

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V  +G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 648 VIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 707

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 708 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 757

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 758 AAGST-----HCLALTEDSEVHSWGSNDQCQ 783



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 602 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 661

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++D GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 662 AVTDNGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 719

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 720 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 767



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 549 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 608

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 609 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTDN 666

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 667 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 722

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 723 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 777

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 778 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 820



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 714

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 715 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 773 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 812


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 646

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 647 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 681



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 439 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 484

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 544

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 545 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 601

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 602 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 710

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 711 ----HCLALTEDSEVHSWGSNDQCQ 731



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 550 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 609

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 610 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 668 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 715



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 614

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 670

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 725

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 726 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 768



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 721 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   L+ +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ ++SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 166/308 (53%), Gaps = 24/308 (7%)

Query: 34  LLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR 90
           LL   + C   N + IA G  H+ AVT+ G +Y++G  ++++G LGHG+T   W P+ + 
Sbjct: 307 LLESLSIC---NVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVS 363

Query: 91  -SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
             L+G+++   + G   T LI+ +GQ+Y FG  +FG   +G + T  ++ P+ VESLK +
Sbjct: 364 GPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGL 421

Query: 150 FVVQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
             +  + G + +A +         +  G+++T+  G+  RLGH      ++P   + +L 
Sbjct: 422 RTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKP-TCVPSLI 480

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           +    + A G+   + L    SG  +++VG  + G+LG+ +  D ++PRL+E  ++    
Sbjct: 481 DYNFHKSACGHTLTIGLTT--SGH-MFTVGSSVYGQLGNPN-NDGRYPRLVED-KVGGGG 535

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
            V VA G++H AV+   G V TWG G  G LGHG+     VP +V+AL D     +A G 
Sbjct: 536 VVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGS 595

Query: 321 YTTFVVSE 328
             T  +S+
Sbjct: 596 SFTAAISQ 603



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 155/349 (44%), Gaps = 37/349 (10%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G G T +   P+P+ S   + +   A G     LI+   +V+ +G++  G   +G  GT 
Sbjct: 243 GPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGA-GTS 301

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVE 191
           +   P+L+ESL    V   A G F T  ++  G +YT  WG    N   LGH +  +   
Sbjct: 302 IF-QPRLLESLSICNVEIIACGEFHTCAVTATGDLYT--WGDGTHNAGLLGHGSTVSHWI 358

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           P  + G LE + V  ++ G  +   +    S   +Y+ G G  G LGHG+R    +P+ +
Sbjct: 359 PKRVSGPLEGLQVSTVSCGTWHTALIT---SSGQLYTFGDGTFGALGHGNRETISYPKEV 415

Query: 252 EQFQLLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVP 302
           E   L  L+ + V+ G WH+A V            G++ TWG G    LGHG+   +  P
Sbjct: 416 E--SLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKP 473

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
             V +L D      A G   T  ++  G +++ G      LG N   DG+         P
Sbjct: 474 TCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLG-NPNNDGR--------YP 524

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +L      V ++V    +      + H   LT +G++Y +G G  G+LG
Sbjct: 525 RL------VEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLG 567



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 135/294 (45%), Gaps = 31/294 (10%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           +G   T  +  P+ +ES   + V   A G    A+++R+  V  F+WG +   RLGH   
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEV--FTWGEECSGRLGHGAG 299

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            +  +P  LL +L    V  IA G  +  A+      +  +  G    G LGHGS     
Sbjct: 300 TSIFQPR-LLESLSICNVEIIACGEFHTCAVTAT-GDLYTWGDGTHNAGLLGHGSTVSHW 357

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  LQ   V+ G WH A++   G++ T+G G +G LGHGN E  S PK V+
Sbjct: 358 IPKRVSG-PLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVE 416

Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 357
           +L  ++ I V+ G + +  V E          G ++++G G+   LGH       G+R A
Sbjct: 417 SLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGH-------GDRSA 469

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             L P  V SL       +  +   S   +  T  LT SG ++  G+   GQLG
Sbjct: 470 K-LKPTCVPSL-------IDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLG 515


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   E        L+ +L  IP +Q+AAG  +   L    SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
                ++    + +L +I +VQIA GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 SQSAPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G ++ GQLG   TEE  + PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G +  K  ++PQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   + +  P+ I+SL GI  +Q AAG  
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  FSWG +   +LG   E        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                ++    + +L +I +VQIA GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176

Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 SQSAPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G ++ GQLG   TEE  + PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G +  K  ++PQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   + +  P+ I+SL GI  +Q AAG  
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 172/364 (47%), Gaps = 30/364 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ----T 419
           +VT +    +             +  TF +  SG++Y+FG G  GQLG    +N+    T
Sbjct: 295 IVTEIACGRQ-------------HTSTF-VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 420 ERGN 423
            +GN
Sbjct: 341 VKGN 344



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +  V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +       PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSTFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-S 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T+    
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  A G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L        A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 173/370 (46%), Gaps = 42/370 (11%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    P RS      ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  A G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +              
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------- 280

Query: 364 LVTSLKQVNERVVQISLTNSIYWNA-----HTFALT-ESGKLYAFGAGDKGQLGIELVNN 417
                 ++N R V   L  SI   A     HT A    SG++Y+FG G  GQLG    +N
Sbjct: 281 -----HEINPRKV-FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334

Query: 418 Q----TERGN 423
           +    T +GN
Sbjct: 335 RKSPFTVKGN 344



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 146/268 (54%), Gaps = 14/268 (5%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
           +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
           +     V++ G G  G+LGH S + E +PR +  F+L+       A G  H +A V   G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSG 314

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           R+ ++G G  G LG G+      P  V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V QAA G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        RI     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 401 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 449

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 450 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 505

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 506 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 565

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 566 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 617

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 618 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 652



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 410 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 455

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 456 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 515

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 516 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 572

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 573 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 681

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 682 ----HCLALTEDSEVHSWGSNDQCQ 702



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 521 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 580

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 581 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 638

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 639 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 686



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 468 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 527

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 528 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 585

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 586 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 641

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 642 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 696

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 697 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 739



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 633

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 634 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 692 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 731


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 646

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 647 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 681



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S  G+VY  A+  D+               +PQLV+ L  +
Sbjct: 439 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 484

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 544

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 545 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 601

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 602 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 710

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 711 ----HCLALTEDSEVHSWGSNDQCQ 731



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  +T+
Sbjct: 550 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 609

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 668 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 715



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 614

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 670

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 725

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 726 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 768



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   V+  A G+     L+ +  
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 721 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 167/341 (48%), Gaps = 27/341 (7%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           R  N     G  HS+    + V + +G    G+LG  T   +++P     ++  R+  A+
Sbjct: 85  RLGNVGVTCGLFHSVLFAEQDV-FVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMAS 141

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG    + +++ G VY +G  +FG   +G    +L+  P+L+E      +V  + G   +
Sbjct: 142 AGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELL--PRLLEGPWKDRIVHVSAGGSHS 199

Query: 162 AVLSREGRVYTFSWGND---ARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
           A ++  G +YT  WG D    RLGH   P+ ++      P      ++P+  +  G  + 
Sbjct: 200 AAVTESGELYT--WGRDEGEGRLGH-GNPDIMDEGALSRPTKVQALDVPIASVYCGGFFT 256

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    SG  ++S G     +LGHG+R +   P+++   + + L  V VA G +HAA +
Sbjct: 257 MALT--KSGQ-LWSWGGNANHELGHGTRANNWKPKVVAALEDVTL--VQVACGGFHAAAL 311

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            QDG+V TWG+G  G LGHG  E    P +V+A+ D    ++A G   T  ++E+GD+Y+
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYT 371

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
           +G      LG   + D Q       L P LV   + ++E+ 
Sbjct: 372 WGKNRDYQLGIPGLKDEQ-------LDPVLVQFPQALHEKT 405



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 158/330 (47%), Gaps = 51/330 (15%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAI----------GN----- 158
           +V+A+G+ + G+  +G + T+ +  P L+ +LK   F   A I          GN     
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKL--PVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 159 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLA 216
             F +VL  E  V+ +  G+  RLG  TE N  +P+        I  VQ+A AG  + +A
Sbjct: 94  GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPY----VNPRIKRVQMASAGGLHNIA 149

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   VY+ G G  G LGHGS   E  PRL+E      +  V V+AG  H+A V +
Sbjct: 150 LTEVGN---VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRI--VHVSAGGSHSAAVTE 204

Query: 277 DGRVCTWGWGR-YGCLGHGN-----EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
            G + TWG     G LGHGN     E   S P  VQAL DV    V  G + T  +++ G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFFTMALTKSG 263

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++S+G   +  LGH       G R AN   P++V +L+ V   +VQ++         H 
Sbjct: 264 QLWSWGGNANHELGH-------GTR-ANNWKPKVVAALEDVT--LVQVACGGF-----HA 308

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            ALT+ GK+  +G G  GQLG   + N  E
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKE 338



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 45/376 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-----GIRIIQA-------------AAGAG 105
           V+++G  + GQ+GHG+ + E  P  I +L+     G+  IQ                G  
Sbjct: 37  VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLF 96

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++L ++   V+ +GK   G    G+        P +   +K   V  A+ G      L+
Sbjct: 97  HSVLFAEQ-DVFVWGKGDGGR--LGIDTEFNQYKPYVNPRIKR--VQMASAGGLHNIALT 151

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G VYT+ +G    LGH +   ++ P  L G  ++  +V ++AG  +  + A   SG  
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDR-IVHVSAGGSH--SAAVTESG-E 207

Query: 226 VYSVGCGLG-GKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           +Y+ G   G G+LGHG+    DE       + Q L++    V  G +    + + G++ +
Sbjct: 208 LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWS 267

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG      LGHG       PKVV AL DV  + VA G +    +++DG V ++G G +  
Sbjct: 268 WGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQ 327

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH  + +G+         P +V       E +   + T      A T A+TE+G LY +
Sbjct: 328 LGHGTLENGK--------EPAIV-------EAMADKTCTYIACGPAWTAAITENGDLYTW 372

Query: 403 GAGDKGQLGIELVNNQ 418
           G     QLGI  + ++
Sbjct: 373 GKNRDYQLGIPGLKDE 388



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 44/236 (18%)

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 257
           GY      + +P+ + V++ G G  G++GHGS   EK P LI   +L             
Sbjct: 21  GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80

Query: 258 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
                L  V V  G +H+ +  +   V  WG G  G LG   E  +  P V   +  V+ 
Sbjct: 81  PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
              + G      ++E G+VY++G G   +LGH +        +   L P+L+       +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS--------YERELLPRLLEG--PWKD 187

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD-KGQLGIELVNNQTERGNPERVD 428
           R+V +S   S     H+ A+TESG+LY +G  + +G+LG          GNP+ +D
Sbjct: 188 RIVHVSAGGS-----HSAAVTESGELYTWGRDEGEGRLG---------HGNPDIMD 229


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 177/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMAL 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDSX---- 676

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
              AL    ++YA+G    GQ G
Sbjct: 677 -CLALRHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4360



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 177/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P+++E  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +  D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4353

Query: 270  HAA 272
            H+A
Sbjct: 4354 HSA 4356



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ + +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     L  
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSXCLALRH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 21/297 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+ AVT+ G +Y++G  ++++G LGHG+    W P+ +   L G+ +   
Sbjct: 131 NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTV 190

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   T LI+ +GQ+Y FG  +FG   +G + +   + P+ VESLK +  +  + G + 
Sbjct: 191 SCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRTISVSCGVWH 248

Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           TA +         +  G+++T+  G+  RLGH    + ++P   + +L +    + A G+
Sbjct: 249 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCIPSLIDYNFHKAACGH 307

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
              + L    +   +++VG  + G+LG+ +  D ++PRL+E+ QL     V VA G++H 
Sbjct: 308 TLTIGLT---TSGHIFTVGSSVYGQLGNPN-NDGRYPRLVEE-QLGGGGVVEVACGSYHV 362

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           AV+   G V TWG G  G LGHG+     VP +V+AL D     VA G   T  + +
Sbjct: 363 AVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAICQ 419



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 157/345 (45%), Gaps = 33/345 (9%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GTT +   P+P+ S   + +   A G     L++   +V+ +G++  G   +G  GT  V
Sbjct: 61  GTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGT-GTN-V 118

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPL 195
             P+LVESL    V   A G F T  ++  G +YT+  G  N   LGH +  +   P  +
Sbjct: 119 FQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV 178

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
            G L+ +PV  ++ G  +   +    S   +Y+ G G  G LGHG+R    +P+ +E   
Sbjct: 179 SGPLDGLPVSTVSCGTWHTALIT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVE--S 233

Query: 256 LLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           L  L+ + V+ G WH A V            G++ TWG G    LGHG+   +  P  + 
Sbjct: 234 LKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIP 293

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
           +L D      A G   T  ++  G +++ G      LG N   DG   R+  ++  QL  
Sbjct: 294 SLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLG-NPNNDG---RYPRLVEEQLGG 349

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   VV+++       + H   LT +G++Y +G G  G+LG
Sbjct: 350 G------GVVEVACG-----SYHVAVLTNAGEVYTWGKGANGRLG 383



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 140/317 (44%), Gaps = 39/317 (12%)

Query: 114 GQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           G +Y +G        +     + Y    T  V  P+ +ES   + V   A G    A+++
Sbjct: 35  GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           R+  V  F+WG +   RLGH T  N  +P  L+ +L    V  IA G  +  A+      
Sbjct: 95  RQSEV--FTWGEECSGRLGHGTGTNVFQPR-LVESLSICNVELIACGEFHTCAVTAT-GD 150

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           +  +  G    G LGHGS      P+ +    L  L    V+ G WH A++   G++ T+
Sbjct: 151 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLDGLPVSTVSCGTWHTALITSSGQLYTF 209

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYS 334
           G G +G LGHGN    S PK V++L  ++ I V+ G + T  V E          G +++
Sbjct: 210 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 269

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G G+   LGH       G+R +  L P  + SL       +  +   +   +  T  LT
Sbjct: 270 WGDGDKYRLGH-------GDRSSK-LKPTCIPSL-------IDYNFHKAACGHTLTIGLT 314

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG ++  G+   GQLG
Sbjct: 315 TSGHIFTVGSSVYGQLG 331


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 25/288 (8%)

Query: 54  HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
           HS AVT  G +Y++G  +++ G LGHG +   W P+ +   L+G+R+   A G   T+L+
Sbjct: 186 HSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLV 245

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSR 166
           +  GQ+++FG  +FG   +G +  K  + P+ VESLK +  ++AA G + TA    V+SR
Sbjct: 246 TSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSR 303

Query: 167 --------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
                    G+++T+  G+  RLGH  +   + P   +  L +    Q+A G+   +AL 
Sbjct: 304 YSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAALVDHNFRQVACGHSLTVALT 362

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              +   +Y++G    G+LG    T     RL    +L       V+ GA+H A +   G
Sbjct: 363 ---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRTLIEEVSCGAYHVAALTSKG 415

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            VCTWG G  G LGHG+ E   VP +V+AL D +   V+ G   T  +
Sbjct: 416 DVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR +RSL  + + Q A G   T L++  G+V+++G++S G   +GV     V  PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L +  V   A G + +  +++ G +YT+  G  N   LGH    +   P  + G LE + 
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR 231

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A G  + + +    S   ++S G G  G LGHG R     PR +E   L  L+ + 
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286

Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            A G WH A V +             G++ TWG G    LGHG++E + VP  V AL D 
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  ++  G +Y+ G     S+ +  + D Q        T +L   L+  
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMG-----SVSYGQLGDPQA-------TGRLPGVLRLG 394

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              + ++S     Y   H  ALT  G +  +G G  G+LG
Sbjct: 395 RTLIEEVSC--GAY---HVAALTSKGDVCTWGKGANGRLG 429



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 20/229 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H++ VTS G ++SFG  + G LGHG  +    PR + SL+G++ ++AA G  
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292

Query: 106 RTMLI------------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  +            S +G+++ +G        +G +  KLV  P  V +L +    Q
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQ 350

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  T  L+  G +YT    +  +LG   +P      P +  L    + +++ G  +
Sbjct: 351 VACGHSLTVALTTTGHLYTMGSVSYGQLG---DPQATGRLPGVLRLGRTLIEEVSCGAYH 407

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
           + AL    S   V + G G  G+LGHG   D   P L+E  +   ++ V
Sbjct: 408 VAALT---SKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKV 453



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 14/180 (7%)

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G+  KL    RTD   PR +    +L++Q   +A G  H A+V + G V +WG    G L
Sbjct: 98  GVTKKLDTSFRTDAFLPRAVRSLVVLDVQ--QIACGVRHTALVTRQGEVFSWGEESGGRL 155

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GHG +   + P+++ +L      +VA G+Y +  V++ GD+Y++G G      HN    G
Sbjct: 156 GHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT-----HNFGLLG 210

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            GN  ++  TP+ V    +     V++S      W  HT  +T +G+L++FG G  G LG
Sbjct: 211 HGNSISH-WTPKRVGGPLE----GVRVSSVACGPW--HTVLVTSTGQLFSFGDGTFGVLG 263


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I ++Q A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+IIQ A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I ++Q+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGHG   E  +P  I +L    I+  A 
Sbjct: 34  RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHG--REGNKPEQIGALADQHIVHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G+   G+  T+  V  P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   + P+   P   + +LE IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKDFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 ARGQLG 328



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +G +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G +   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG-KDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I ++Q A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+IIQ A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I ++Q+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I ++Q A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+IIQ A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I ++Q+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 162/322 (50%), Gaps = 19/322 (5%)

Query: 31  LRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
           LR ++A    C     R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P
Sbjct: 65  LRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKP 122

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVES 145
             I +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+  V  P+L++ 
Sbjct: 123 EQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQK 180

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPV 204
           L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P   + +LE IP+
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPL 239

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
            Q+AAG  +  AL+   SG AV++ G    G+LG     D + P  +   +LL  Q VV 
Sbjct: 240 AQVAAGGAHSFALSL--SG-AVFAWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVY 293

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYT 322
           ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   +   +A G  +T
Sbjct: 294 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 353

Query: 323 TFVVSEDGDVYSFGCGESASLG 344
              V   G +Y+FGCG    LG
Sbjct: 354 LAFVPSSGLIYAFGCGARGQLG 375



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 143/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 68  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 124

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 125 IGALADQNIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 180

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 181 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 238

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+++G   +  LG +   D +   H  +L  Q         
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 289

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 290 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 335



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQNIVHVAC 138

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 199 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 253

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 314 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 358

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 359 SSGLIYAFGCGARGQLG 375



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 188 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 247

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+A+G ++ G  + G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 248 HSFALSLSGAVFAWGMNNAG--QLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 362

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 363 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 391



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 199 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 257

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 258 VFAWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 313

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 314 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 371

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 372 GQLGTGHTCNVKCPSPVK 389



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+++G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 299

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 300 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 357

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 358 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 390


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 170/352 (48%), Gaps = 23/352 (6%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P+ I +L  IR +Q   G      ++  G+VYA   
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA--T 3411

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
                    G+ GT  VTS +++ESL+++ V + A+  G      LS +G VY++  G+D 
Sbjct: 3412 GYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDG 3471

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH    N  +   ++  L    V+ I+ G  +    AC      +Y+ G G  G+LGH
Sbjct: 3472 KLGHGNR-NSCDRPRVIEALRGKGVIDISCGGSHS---ACITQNHELYTWGKGRYGRLGH 3527

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+++E  +   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3528 GDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGC 3587

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             +P  V++L  +    V  G   +  ++  G VY++G G+   LGH            +V
Sbjct: 3588 KIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGV--------DDHV 3639

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ V +L+   ++V+ I+ T S+    H  A T++G++Y +G  D+GQLG
Sbjct: 3640 RRPKRVAALQ--GKKVITIA-TGSL----HCVASTDTGEVYTWGDNDEGQLG 3684



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 169/359 (47%), Gaps = 28/359 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML-ISDAGQVYAFGKD 122
            V+ +G N   QLG G    + +   +    G   +Q  AG  +T+  +S  G+V+A G+ 
Sbjct: 2423 VFVWGLNDKDQLG-GLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGES 2481

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    G      VT P+ +E+L +  V + ++  G      L+ EG+++++  G D +
Sbjct: 2482 TNGRLGLGPLSAN-VTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGK 2540

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    N   P  L+ T ++  V  ++ G  +  A+    S   +Y+ G G  G+LGHG
Sbjct: 2541 LGHGNRMNCDHPK-LIDTFKSSCVRDMSCGSSHSAAIL---SSGELYTWGLGEYGRLGHG 2596

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
                   P+ ++ F    +  +   +       +  DG V +WG G +G LG G  E  S
Sbjct: 2597 DNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCS 2656

Query: 301  VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            VP  V+ L       VA G   +  +S  G V+++G G+   LGH       GN   +V 
Sbjct: 2657 VPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH-------GN-DTHVR 2708

Query: 361  TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
             PQ+V  L+   +++V +++        H  A+T+SG+++A+G  D GQ G    NN T
Sbjct: 2709 KPQIVDGLR--GKKIVDVAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG----NNTT 2756



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 22/262 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAA 209
           VV    G  F A L+REG VY++  G+  +LGH  T P + EP  + G L    V++I+ 
Sbjct: 20  VVTHTDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPRE-EPTLVTG-LAGKQVIRISC 76

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  +  A+    S   +Y+ G G  G+LGHGS  D+  P L+   +  ++  V   +G  
Sbjct: 77  GSTHSAAVT---SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDA 133

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H      DG V +WG G YG LG G  +    PK ++ L  +    V  G   +  ++ D
Sbjct: 134 HTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRD 193

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G V+++G GE   LGH            +V  P+LV +L    + VV +S+      + H
Sbjct: 194 GSVWTWGKGEGFRLGHGT--------EDHVRHPKLVEALD--GKHVVDVSVG-----SIH 238

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
             ALT++G++Y +G  D+GQLG
Sbjct: 239 CLALTDAGEVYCWGRNDQGQLG 260



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 28/349 (8%)

Query: 47   QAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQAAA 102
            Q IAG   ++ AV+  G V++ G +++G+LG G        PR I +L    +R +   +
Sbjct: 2457 QQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHS 2516

Query: 103  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            G    M ++  G+++++G+   G+  +G +       P+L+++ K+  V   + G+  +A
Sbjct: 2517 GGRHAMALTIEGKLFSWGEGEDGKLGHGNRMN--CDHPKLIDTFKSSCVRDMSCGSSHSA 2574

Query: 163  VLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
             +   G +YT+  G   RLGH     H +P  V+      +  +  V+ IA G      L
Sbjct: 2575 AILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQ------SFTSHRVIDIACGSRDAQTL 2628

Query: 218  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
            A    G  V+S G G  GKLG G       P  +E+ Q   +    VA GA  +  +   
Sbjct: 2629 ALTDDG-TVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGV--CKVACGAQFSLALSTS 2685

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            G V TWG G Y  LGHGN+     P++V  L   K + VA G      V++ G V+++G 
Sbjct: 2686 GLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGD 2745

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             +    G+N       NR      PQLV  L+      V    ++SI W
Sbjct: 2746 NDHGQQGNNTTT---VNRR-----PQLVNGLEGQKITRVACGSSHSIAW 2786



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 162/343 (47%), Gaps = 16/343 (4%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 104
            Q + G     AVT++G VY+ G    G+LG G T+     + + SLQ   +R +   +G 
Sbjct: 3391 QIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGG 3450

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               M +S  G VY++G+   G+  +G + +     P+++E+L+   V+  + G   +A +
Sbjct: 3451 KHAMALSADGDVYSWGEGDDGKLGHGNRNS--CDRPRVIEALRGKGVIDISCGGSHSACI 3508

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            ++   +YT+  G   RLGH    + + P  ++  L    V+ +A G      L C     
Sbjct: 3509 TQNHELYTWGKGRYGRLGHGDSEDQLLPK-VVEALRGNRVIDVACGSGDAQTL-CLTDDD 3566

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  +E   L+ L    V  G+  +  + + G V TWG
Sbjct: 3567 CVWSWGDGDYGKLGRGGSDGCKIPMKVE--SLIGLGVSKVECGSQFSVALTRSGAVYTWG 3624

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG ++    PK V AL   K I +ATG       ++ G+VY++G  +   LG
Sbjct: 3625 KGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG 3684

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
                 DG  N  A    P+LVT+L+      V     ++I W+
Sbjct: 3685 -----DGTTNAIAR---PRLVTALQGKKISRVACGSAHTIAWS 3719



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 20/281 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T +G VYS+GS   G+LGHG T     P  +  L G ++I+ + G+  +  ++  
Sbjct: 28  HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G++Y +G+ ++G   +G    +LV  P LV  L+   ++  A   G+  T   + +G V+
Sbjct: 88  GELYTWGRGNYGRLGHGSSEDQLV--PVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 145

Query: 172 TFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           ++  G+  +LG         P  +E       L+ + V ++  G  + LAL    S   V
Sbjct: 146 SWGDGDYGKLGRGGSDGCKNPKSIE------RLQGLGVCKVYCGAQFSLALTRDGS---V 196

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++ G G G +LGHG+    +HP+L+E     ++  V V+ G+ H   +   G V  WG  
Sbjct: 197 WTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHV--VDVSVGSIHCLALTDAGEVYCWGRN 254

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG  + +    P +V  L     + +A G   +F  S
Sbjct: 255 DQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWS 295



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 10/204 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  HS AVTS+G +Y++G  + G+LGHG++E++  P  +  L+G  II  A G+G   T+
Sbjct: 77  GSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTL 136

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             +D G V+++G   +G  + G  G+    +P+ +E L+ + V +   G  F+  L+R+G
Sbjct: 137 AAADDGTVWSWGDGDYG--KLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDG 194

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            V+T+  G   RLGH TE  D   HP L+  L+   VV ++ G  + LAL        VY
Sbjct: 195 SVWTWGKGEGFRLGHGTE--DHVRHPKLVEALDGKHVVDVSVGSIHCLALT---DAGEVY 249

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLI 251
             G    G+LG         P L+
Sbjct: 250 CWGRNDQGQLGDIDCQIRPEPTLV 273



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H++A    G V+S+G    G+LG G ++    P+ I  LQG+ + +   GA  ++ 
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLA 189

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G V+ +GK       +G +    V  P+LVE+L    VV  ++G+     L+  G 
Sbjct: 190 LTRDGSVWTWGKGEGFRLGHGTEDH--VRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALAC 219
           VY +   +  +LG       + P P L+  L +  +V IA G     A +C
Sbjct: 248 VYCWGRNDQGQLGDID--CQIRPEPTLVSGLASKGIVGIACGPAQSFAWSC 296



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            S+   G   S+A+T  G VY++G     +LGHG  +   RP+ + +LQG ++I  A G+ 
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSL 3661

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              +  +D G+VY +G +   E + G   T  +  P+LV +L+   + + A G+  T   S
Sbjct: 3662 HCVASTDTGEVYTWGDND--EGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWS 3719



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 275  GQDG--RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            GQ+G  +V  WG      LG        VP + + +  +K   +A G  T F VS DG V
Sbjct: 2416 GQEGQIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKV 2475

Query: 333  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
              F CGES + G      G G   ANV  P+ + +L     R V +          H  A
Sbjct: 2476 --FACGESTN-GRL----GLGPLSANVTVPRQIENLSSFMVRKVSVHSGGR-----HAMA 2523

Query: 393  LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            LT  GKL+++G G+ G+LG     N+    +P+ +D
Sbjct: 2524 LTIEGKLFSWGEGEDGKLGH---GNRMNCDHPKLID 2556



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 38/68 (55%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H +A T  G VY++G N  GQLG GTT    RPR + +LQG +I + A G+  T+  
Sbjct: 3659 GSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAW 3718

Query: 111  SDAGQVYA 118
            S    V A
Sbjct: 3719 STCKPVNA 3726


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 21/297 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+ AVT+ G +Y++G  ++++G LGHG+    W P+ +   L G+ +   
Sbjct: 316 NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAV 375

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   T LI+ +GQ+Y FG  +FG   +G + +   + P+ VESLK +  +  + G + 
Sbjct: 376 SCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRTISVSCGVWH 433

Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           TA +         +  G+++T+  G+  RLGH    + ++P   + +L +    + A G+
Sbjct: 434 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAACGH 492

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
              + L    +   +++VG  + G+LG+ +  D ++PRL+E+ QL     V VA G++H 
Sbjct: 493 TLTIGLT---TSGHIFTVGSPVYGQLGNPN-NDGRYPRLVEE-QLGGGGVVEVACGSYHV 547

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           AV+   G V TWG G  G LGHG+     VP +V+AL D     VA G   T  + +
Sbjct: 548 AVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAICQ 604



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 158/347 (45%), Gaps = 37/347 (10%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GTT +   P+P+ S   + +   A G     L++   +V+ +G++  G   +G+ GT  V
Sbjct: 246 GTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGI-GTN-V 303

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPH 193
             P+LVESL    V   A G F T  ++  G +YT  WG    N   LGH +  +   P 
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYT--WGDGTHNAGLLGHGSNVSHWIPK 361

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            + G L+ +PV  ++ G  +   +    S   +Y+ G G  G LGHG+R    +P+ +E 
Sbjct: 362 RVSGPLDGLPVSAVSCGTWHTALIT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVE- 417

Query: 254 FQLLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
             L  L+ + V+ G WH A V            G++ TWG G    LGHG+   +  P  
Sbjct: 418 -SLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTC 476

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           V +L D      A G   T  ++  G +++ G      LG N   DG   R+  ++  QL
Sbjct: 477 VPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLG-NPNNDG---RYPRLVEEQL 532

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                     VV+++       + H   LT +G++Y +G G  G+LG
Sbjct: 533 GGG------GVVEVACG-----SYHVAVLTNAGEVYTWGKGTNGRLG 568



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 132/294 (44%), Gaps = 31/294 (10%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           Y    T  V  P+ +ES   + V   A G    A+++R+  V  F+WG +   RLGH   
Sbjct: 243 YSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGIG 300

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            N  +P  L+ +L    V  IA G  +  A+      +  +  G    G LGHGS     
Sbjct: 301 TNVFQPR-LVESLSTCNVELIACGEFHTCAVTAT-GDLYTWGDGTHNAGLLGHGSNVSHW 358

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  L    V+ G WH A++   G++ T+G G +G LGHGN    S PK V+
Sbjct: 359 IPKRVSG-PLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVE 417

Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 357
           +L  ++ I V+ G + T  V E          G ++++G G+   LGH       G+R +
Sbjct: 418 SLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGH-------GDRSS 470

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             L P  V SL       +  +   +   +  T  LT SG ++  G+   GQLG
Sbjct: 471 K-LKPTCVPSL-------IDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLG 516


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 176/370 (47%), Gaps = 27/370 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HSIA+   GVV S+G    GQLGHG  ++   P  I +L    +     GA  T+ +
Sbjct: 18  GSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAV 77

Query: 111 -SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EG 168
            S  GQ+Y++G   FG   +G  G   V  P+ +       V + A G+  T V+++ +G
Sbjct: 78  ASSRGQIYSWGWGDFGRLGHGECGDVFV--PRPIAFFSGRPVARVACGDTHTLVVTQGDG 135

Query: 169 RVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            +YTF    + +LG  HT  ND     L+  L+   V  +A G  +  +LA   +G  V+
Sbjct: 136 ALYTFGRNQNGQLGLGHT--NDCLSPQLVTALQGERVSSVACGSEH--SLAATEAGT-VF 190

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G  G LG G   D   P  +     + +  VV   G  H+AVV  +GRV T+GW +
Sbjct: 191 SWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVV--CGWRHSAVVTDEGRVFTFGWSK 248

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LGHG+    + P +V  L   +   VA G   T     +G++Y++G  +   LG   
Sbjct: 249 YGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLG--- 305

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN------SIYWNAHTFALTESGKLYA 401
           + D + +R A    P  V         V   + T       +  W  HT A+TE+G++Y+
Sbjct: 306 LGDSE-DRAA----PTPVAGFGLAGGGVEAGAATPRRVALLACGWR-HTVAVTEAGEVYS 359

Query: 402 FGAGDKGQLG 411
           +G G  GQLG
Sbjct: 360 WGRGVNGQLG 369



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 148/317 (46%), Gaps = 24/317 (7%)

Query: 49  IAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           + G  +++AV +S+G +YS+G    G+LGHG   + + PRPI    G  + + A G   T
Sbjct: 68  VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHT 127

Query: 108 MLISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++++   G +Y FG++  G+   G+  T    SPQLV +L+   V   A G+  +   + 
Sbjct: 128 LVVTQGDGALYTFGRNQNGQ--LGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE 185

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G V+++ WG    LG     +   P  ++G L+ + V  +  G+ +   +  +     V
Sbjct: 186 AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVTDEGR---V 241

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           ++ G    G+LGHG   D   P L+   Q   +  V   AG W H      +G +  WGW
Sbjct: 242 FTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTV---AGGWRHTMAADSEGNLYAWGW 298

Query: 286 GRYGCLGHGNEECESVPKVVQALNDV------------KAIHVATGDYTTFVVSEDGDVY 333
            ++G LG G+ E  + P  V                  +   +A G   T  V+E G+VY
Sbjct: 299 NKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVY 358

Query: 334 SFGCGESASLGHNAIAD 350
           S+G G +  LGH A  D
Sbjct: 359 SWGRGVNGQLGHGAEQD 375



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 26/333 (7%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R++  + G+  ++ + D G V ++G+   G+  +G       TSP  + +L +  V    
Sbjct: 11  RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDAVV 68

Query: 156 IGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G  +T AV S  G++Y++ WG+  RLGH    +   P P+       PV ++A G  + 
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIA-FFSGRPVARVACGDTHT 127

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           L +  Q  G A+Y+ G    G+LG G   D   P+L+   Q   +  V  A G+ H+   
Sbjct: 128 LVVT-QGDG-ALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSV--ACGSEHSLAA 183

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            + G V +WGWGRYG LG G+ +    P  V  L+ V    V  G   + VV+++G V++
Sbjct: 184 TEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFT 243

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           FG  +   LGH          H +   P LV  L+      V         W  HT A  
Sbjct: 244 FGWSKYGQLGH--------GDHVDHTRPCLVAGLQHCRVSTVAGG------WR-HTMAAD 288

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             G LYA+G    GQLG+    +  +R  P  V
Sbjct: 289 SEGNLYAWGWNKFGQLGL---GDSEDRAAPTPV 318



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 17/266 (6%)

Query: 43  RENSQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           R  ++   G  H++ VT   G +Y+FG N +GQLG G T +   P+ + +LQG R+   A
Sbjct: 115 RPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G+  ++  ++AG V+++G   +G    G    +   +P  V  L  + V     G   +
Sbjct: 175 CGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRY--TPTRVVGLDGVTVTSVVCGWRHS 232

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           AV++ EGRV+TF W    +LGH    +   P  L+  L++  V  +A G+ + +A   + 
Sbjct: 233 AVVTDEGRVFTFGWSKYGQLGHGDHVDHTRP-CLVAGLQHCRVSTVAGGWRHTMAADSEG 291

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----------QPVVVAAGAWHA 271
           +   +Y+ G    G+LG G   D   P  +  F L             +  ++A G  H 
Sbjct: 292 N---LYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHT 348

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEE 297
             V + G V +WG G  G LGHG E+
Sbjct: 349 VAVTEAGEVYSWGRGVNGQLGHGAEQ 374



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 16/210 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  HS+A T  G V+S+G    G LG G +++ + P  +  L G+ +     G  
Sbjct: 171 SSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWR 230

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++D G+V+ FG   +G+  +G       T P LV  L++  V   A G   T    
Sbjct: 231 HSAVVTDEGRVFTFGWSKYGQLGHGDHVDH--TRPCLVAGLQHCRVSTVAGGWRHTMAAD 288

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG---------TLENIP--VVQIAAGYCYL 214
            EG +Y + W    +LG     +   P P+ G              P  V  +A G+ + 
Sbjct: 289 SEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHT 348

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
           +A+        VYS G G+ G+LGHG+  D
Sbjct: 349 VAVT---EAGEVYSWGRGVNGQLGHGAEQD 375


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
          Length = 1413

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 168/381 (44%), Gaps = 37/381 (9%)

Query: 32   RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
            R +  G        SQ  AG  H++ +   G V++ G+N +GQLG GTT    R  P++ 
Sbjct: 1028 RGISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTIN--RSTPVQV 1085

Query: 92   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
                 +I  A G   T+ +     V+A+G +S+G+   G    + + +P  V  L NI  
Sbjct: 1086 SGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNIIA 1143

Query: 152  VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
            +  A G   T  L  +G V+ + +    +LG  +  N   P  + G  +   V+ IA  Y
Sbjct: 1144 I--AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---VIAIAGEY 1198

Query: 212  CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-H 270
             + +AL    +   V++ G    G+LG GS T+   P      Q+  L  V+  AG + H
Sbjct: 1199 VHTVALKSDGT---VWAWGYNGYGQLGDGSTTNRSTP-----VQVSGLTDVIAIAGGYVH 1250

Query: 271  AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
               +  DG V TWGW   G LG G       P  V  L D  AI +A GDY T  +  D 
Sbjct: 1251 TIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDN 1308

Query: 331  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
             V+++G      LG     DG      N LTP  V+ L         I++    Y   HT
Sbjct: 1309 TVWAWGSNSYGQLG-----DGT---TINRLTPVQVSGLTDA------IAIAGGDY---HT 1351

Query: 391  FALTESGKLYAFGAGDKGQLG 411
             AL     ++A+G+   GQLG
Sbjct: 1352 IALKSDNTVWAWGSNSYGQLG 1372



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 148/307 (48%), Gaps = 25/307 (8%)

Query: 48  AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIAG   H+IA+ S G V+++G+N  GQLG G+T +  R  P++      +I  A G   
Sbjct: 197 AIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTD--RSTPVQVSGLTDVIAIAGGYAH 254

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ +   G V+A+G +  G    G    + +  P  V  L ++  +  A GN  T  L  
Sbjct: 255 TIALKSDGTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDVIAI--AGGNAHTIALKS 310

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G V+  +WG++   +LG  +  N   P  + G  +   V+ IA GY + + L    +  
Sbjct: 311 DGTVW--AWGDNEGGQLGDGSTTNRSTPVKVSGLAD---VIAIAGGYSHTIVLRSDGT-- 363

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
            V++ G   GG+LG GS T+   P      Q+  L  V+ +A G +H   V  DG +  W
Sbjct: 364 -VWTWGHNEGGQLGDGSTTNRSTP-----VQVSGLADVIAIAGGVYHTIAVKSDGTMWAW 417

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G+  YG LG G     S P  V  L DV AI  A G Y T  +  DG V+++G      L
Sbjct: 418 GYNWYGQLGDGTTINSSTPVQVNGLTDVIAI--AGGYYHTIAMKSDGAVWTWGFNYYGQL 475

Query: 344 GHNAIAD 350
           G  +I +
Sbjct: 476 GDGSITN 482



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 173/378 (45%), Gaps = 41/378 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ  AG  H++ +   G V+++G+N +GQLG  +T    R  P++      +I  A GA 
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTN--RSTPVQVSGLTDVIAIAGGAY 203

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ +   G V+A+G +  G  + G   T   ++P  V  L ++  +  A G   T  L 
Sbjct: 204 HTIALKSDGTVWAWGNNEGG--QLGDGSTTDRSTPVQVSGLTDVIAI--AGGYAHTIALK 259

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            +G V+  +WG++   RLG  +  N   P  + G  +   V+ IA G  + +AL    + 
Sbjct: 260 SDGTVW--AWGDNEGGRLGDGSTTNRSIPVKVGGLSD---VIAIAGGNAHTIALKSDGT- 313

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 282
             V++ G   GG+LG GS T+   P      ++  L  V+  AG + H  V+  DG V T
Sbjct: 314 --VWAWGDNEGGQLGDGSTTNRSTP-----VKVSGLADVIAIAGGYSHTIVLRSDGTVWT 366

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LG G+    S P  V  L DV AI  A G Y T  V  DG ++++G      
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVYHTIAVKSDGTMWAWGYNWYGQ 424

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG     DG      N  TP  V  L  V      I++    Y   HT A+   G ++ +
Sbjct: 425 LG-----DGT---TINSSTPVQVNGLTDV------IAIAGGYY---HTIAMKSDGAVWTW 467

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG   + N++ 
Sbjct: 468 GFNYYGQLGDGSITNRST 485



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 20/293 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+IA+ S G V+++G N+SGQLG GTT    R  P++ +    +I  A G   T+ +   
Sbjct: 652 HTIALKSDGTVWTWGWNNSGQLGDGTTIN--RSTPVQVIGLTDVIAIAGGDYHTIALKSD 709

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+ +G + +G+   G    +  ++P  V+ L +I  +  A G   +  L  +G V+ +
Sbjct: 710 GTVWTWGFNYYGQLGGGATTNR--STPVQVKGLADIIAI--AGGYVHSIALKSDGTVWAW 765

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            +    +LG  +  + + P  + G  +   ++ IA GY + +AL    +   V++ G   
Sbjct: 766 GYNGYGQLGDGSTTDHLTPVQVSGLTD---IIAIAGGYIHTIALKSDGT---VWAWGHNE 819

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           GG+LG G+ T+   P      Q+  L  V+ V A  +H   +  DG V TWG   YG LG
Sbjct: 820 GGQLGDGTTTNSSTP-----VQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLG 874

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G+    S+P  V  L DV AI  A G Y T  +  DG V+++G   +  LG+
Sbjct: 875 DGSTTERSLPVQVIGLTDVIAI--AGGYYHTIALKSDGAVWAWGYNGNNQLGN 925



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 174/424 (41%), Gaps = 45/424 (10%)

Query: 8   FKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSF 67
             P T    +   Q  GG        +  G        +Q  AG  H++ +   G V+++
Sbjct: 564 LTPWTTYYCRIASQNIGG--------IYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAY 615

Query: 68  GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
           G+N + QLG G+T +   P  +  L     I  A G   T+ +   G V+ +G ++ G+ 
Sbjct: 616 GANWNSQLGDGSTTDSSTPVQVSGLT--DAIAIAGGVYHTIALKSDGTVWTWGWNNSGQL 673

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
             G    +  ++P  V  L ++  +  A G++ T  L  +G V+T+ +    +LG     
Sbjct: 674 GDGTTINR--STPVQVIGLTDVIAI--AGGDYHTIALKSDGTVWTWGFNYYGQLGGGATT 729

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           N   P  + G  +   ++ IA GY + +AL    +   V++ G    G+LG GS TD   
Sbjct: 730 NRSTPVQVKGLAD---IIAIAGGYVHSIALKSDGT---VWAWGYNGYGQLGDGSTTDHLT 783

Query: 248 PRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           P      Q+  L  ++  AG + H   +  DG V  WG    G LG G     S P  V 
Sbjct: 784 P-----VQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVS 838

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
            L DV A+      Y T  +  DG V+++G      LG     DG     +    P  V 
Sbjct: 839 GLTDVIAVTARL--YHTIALKSDGTVWTWGRNIYGQLG-----DGSTTERS---LPVQVI 888

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 426
            L  V      I++    Y   HT AL   G ++A+G     QLG     N +      R
Sbjct: 889 GLTDV------IAIAGGYY---HTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLR 939

Query: 427 VDID 430
            D++
Sbjct: 940 YDMN 943



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 165/420 (39%), Gaps = 82/420 (19%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H+IA+ S G V+++G N  GQLG G+T E  R  P++ +    +I  A G   T+ +   
Sbjct: 852  HTIALKSDGTVWTWGRNIYGQLGDGSTTE--RSLPVQVIGLTDVIAIAGGYYHTIALKSD 909

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVVQAAIGNFFTAVL------ 164
            G V+A+G +  G  + G   TK  ++P  V SL+   N     A I    T V       
Sbjct: 910  GAVWAWGYN--GNNQLGNWSTKNSSTP--VRSLRYDMNSVTTPAVITGSTTCVSLSSVLL 965

Query: 165  ------SREGRVYTFSWGNDARLGHHTEP------NDVEPHPLLGTLEN----------- 201
                  +R      F +G  + +   T        +       LG+L             
Sbjct: 966  NGWVDGNRAATTAWFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQ 1025

Query: 202  -------------IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
                         +P  QI+AG  + L L  +P G  V++ G    G+LG G+  +   P
Sbjct: 1026 NSRGISYGSETIFLPRSQISAGAYHTLTL--KPDGT-VWACGANWNGQLGDGTTINRSTP 1082

Query: 249  RLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
                  Q+  L  V+ +A G +H   +  D  V  WG   YG LG G     S+P  V  
Sbjct: 1083 -----VQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTY 1137

Query: 308  LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
            L ++ AI  A G   T  +  DG V+++G      LG  +      NR   V    L   
Sbjct: 1138 LTNIIAI--AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTT----NRSTPVQVSGLTDV 1191

Query: 368  LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +    E V             HT AL   G ++A+G    GQLG     + T R  P +V
Sbjct: 1192 IAIAGEYV-------------HTVALKSDGTVWAWGYNGYGQLGD---GSTTNRSTPVQV 1235



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 60/401 (14%)

Query: 48  AIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIAG   H+IA+ S G V+++G N  G+LG G+T     P  +  L    +I  A G   
Sbjct: 247 AIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLS--DVIAIAGGNAH 304

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ +   G V+A+G +  G+   G   T   ++P  V  L ++  +  A G   T VL  
Sbjct: 305 TIALKSDGTVWAWGDNEGGQ--LGDGSTTNRSTPVKVSGLADVIAI--AGGYSHTIVLRS 360

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G V+T+      +LG  +  N   P  + G  +   V+ IA G  + +A+    +   +
Sbjct: 361 DGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIAVKSDGT---M 414

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
           ++ G    G+LG G+  +   P      Q+  L  V+ +A G +H   +  DG V TWG+
Sbjct: 415 WAWGYNWYGQLGDGTTINSSTP-----VQVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGF 469

Query: 286 GRYGCLGHGNEECESVP--KVVQALNDVKAIHVATGDYTTFVVSE---DGDVYSFGCGES 340
             YG LG G+    S P  + +  +  V    V TG  T   +S    +G V   G   +
Sbjct: 470 NYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATT 529

Query: 341 ASLGH-----------NAIADGQGNRHANV----LTPQLVTSLKQVNERVVQISLTNSIY 385
           A   +             I+ G G+ +       LTP      +  ++ +        IY
Sbjct: 530 AWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNI------GGIY 583

Query: 386 WNA---------------HTFALTESGKLYAFGAGDKGQLG 411
           + +               HT  L   G ++A+GA    QLG
Sbjct: 584 YGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLG 624



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 103/227 (45%), Gaps = 31/227 (13%)

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           IP  QI+AG  + L L  +P G AV++ G    G+LG  S T+   P      Q+  L  
Sbjct: 143 IPRSQISAGAYHTLTL--KPDG-AVWTWGANWNGQLGDESTTNRSTP-----VQVSGLTD 194

Query: 262 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
           V+ +A GA+H   +  DG V  WG    G LG G+    S P  V  L DV AI  A G 
Sbjct: 195 VIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIAI--AGGY 252

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T  +  DG V+++G  E   LG  +      NR      P  V  L  V      I++
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTT----NRSI----PVKVGGLSDV------IAI 298

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                 NAHT AL   G ++A+G  + GQLG     + T R  P +V
Sbjct: 299 AGG---NAHTIALKSDGTVWAWGDNEGGQLGD---GSTTNRSTPVKV 339


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G  + G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDG--QLGL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ Q     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   E        L+ +L  IP  Q+AAG  +   L    SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQIA GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176

Query: 245 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +    VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G ++ GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G +  K  +SPQL++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   + +  P+ I+SL GI   Q AAG  
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G  
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I ++Q A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+IIQ A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I ++Q+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I ++Q A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+IIQ A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I ++Q+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I ++Q A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+IIQ A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I ++Q+A GY + LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG GT  ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   E        L+ +L  IP  Q+AAG  +   L    SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQIA GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176

Query: 245 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +    VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G ++ GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G +  K  +SPQL++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   + +  P+ I+SL GI   Q AAG  
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G  
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + V    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTA 735



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 25/353 (7%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4076

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4077 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4134

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-------LGTLENIPVV-QIAAGYCYLL 215
            ++ +G+++TF  G+  RLG     N   P  +       +G   N  ++  +A G  + L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            A++    G  V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + 
Sbjct: 4195 AVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALT 4250

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            +DG+V T+G  R   L  G     + P+ V  L  V    VA G   T  ++  GD+Y++
Sbjct: 4251 KDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAW 4310

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      LG      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4311 GSNSEGQLGL-----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 23/210 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4035 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4094

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4095 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4152

Query: 346  NAIADGQGNRHANVLTPQLVTSLK-----QVNERVVQISLTNSIYWNAHTFALTESGKL- 399
                 G GN  +N   P+ VT+L+     Q   + +  S+   +    HT A++  G + 
Sbjct: 4153 -----GLGNT-SNKKLPERVTALEGYQIGQARNKSIICSVACGL---NHTLAVSADGSMV 4203

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            +AFG GD G+LG+    N T + +P++VD+
Sbjct: 4204 WAFGDGDYGKLGL---GNSTAKSSPQKVDV 4230



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 32/252 (12%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4115 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4174

Query: 98   IQA---------AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
             QA         A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L 
Sbjct: 4175 GQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLC 4232

Query: 148  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLE 200
             I + + A G  F+  L+++G+VYTF  G D  +G       +H  P  V   P+L    
Sbjct: 4233 GIGIKKVACGTQFSVALTKDGQVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA--- 4284

Query: 201  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
             + +  +A G  + LAL    S   +Y+ G    G+LG G     + P L+   Q  N++
Sbjct: 4285 GVVIEDVAVGAEHTLALT---STGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4341

Query: 261  PVVVAAGAWHAA 272
               ++AG  H+A
Sbjct: 4342 Q--ISAGRCHSA 4351



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 149/333 (44%), Gaps = 32/333 (9%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4074

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4075 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4132

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-----QPVV--VAAGA 268
              A   S   +++ G G  G+LG G+ +++K P  +   +   +     + ++  VA G 
Sbjct: 4133 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGL 4190

Query: 269  WHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             H   V  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  ++
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250

Query: 328  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
            +DG VY+F  G+   +G   + +G+   H     PQ V  L  V    V +         
Sbjct: 4251 KDGQVYTF--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------A 4295

Query: 388  AHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
             HT ALT +G +YA+G+  +GQLG+   N+  E
Sbjct: 4296 EHTLALTSTGDIYAWGSNSEGQLGLGHTNHVRE 4328



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + Q++AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQVSAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   E        L+ +L  IP  Q+AAG  +   L    SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQIA GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176

Query: 245 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +    VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G ++ GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G +  K  +SPQL++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   + +  P+ I+SL GI   Q AAG  
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G  
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4190

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4248

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4309 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4345



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4173

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4174 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4231

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4232 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4283

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4284 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4338

Query: 270  HAA 272
            H+A
Sbjct: 4339 HSA 4341



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4073

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4132 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4187

Query: 276  QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG V   +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4188 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4292

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVRE 4318



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4151

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G  ++AFG 
Sbjct: 4152 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4198

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4199 GDYGKLGL---GNSTAKSSPQKVDV 4220



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 154/299 (51%), Gaps = 19/299 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ +TS   V+++G N++GQLG GTT     P P + L    + Q +AG   ++ 
Sbjct: 77  AGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLA 134

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSRE 167
           ++D G+V+A+G +S G+   G   T    +P  V+ L   +   V AA GN   A L+ +
Sbjct: 135 LTDDGRVFAWGLNSSGQLGDGT--TADSRTPVQVQGLATDSTIKVVAAGGNHSLA-LTSD 191

Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           GRV  F+WG ++  +LG+++  +   P  + G   N  V  +AAG  + LAL    S   
Sbjct: 192 GRV--FAWGKNSSGQLGNNSTVDSSIPVQVQGLPAN--VTAVAAGGNHSLALT---SDGR 244

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +Y+ G    G+LG G+ ++   P L+        +PV V+AG  H+  + QDG V  WG 
Sbjct: 245 IYAWGLNSSGQLGDGTTSNSSTPVLVAGLPA-GSKPVAVSAGKDHSLALMQDGTVYAWGG 303

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             YG LG+G      +P  V  L +V A+     D  +  ++ DG VY++G   S  LG
Sbjct: 304 NSYGQLGNGTTTASEMPVQVTGLANVTAVSAGGSD--SLALTSDGYVYAWGLNSSGQLG 360



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 127/258 (49%), Gaps = 11/258 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGA 104
           +Q  AG  HS+A+T  G V+++G NSSGQLG GTT +   P  ++ L     I+  AAG 
Sbjct: 123 AQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGG 182

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             ++ ++  G+V+A+GK+S G  + G   T   + P  V+ L       AA GN   A L
Sbjct: 183 NHSLALTSDGRVFAWGKNSSG--QLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLA-L 239

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +GR+Y +   +  +LG  T  N   P  + G       V ++AG  + LAL    +  
Sbjct: 240 TSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT-- 297

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            VY+ G    G+LG+G+ T  + P  ++   L N+    V+AG   +  +  DG V  WG
Sbjct: 298 -VYAWGGNSYGQLGNGTTTASEMP--VQVTGLANV--TAVSAGGSDSLALTSDGYVYAWG 352

Query: 285 WGRYGCLGHGNEECESVP 302
               G LG G     + P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 144/328 (43%), Gaps = 31/328 (9%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           +AG   +++++    V+A+G ++ G+   G    +   +P   + L +  V Q + G   
Sbjct: 76  SAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTP--AQGLPS--VAQVSAGESH 131

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +  L+ +GRV+ +   +  +LG  T  +   P  + G   +  +  +AAG  + LAL   
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALT-- 189

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            S   V++ G    G+LG+ S  D   P    Q Q L      VAAG  H+  +  DGR+
Sbjct: 190 -SDGRVFAWGKNSSGQLGNNSTVDSSIPV---QVQGLPANVTAVAAGGNHSLALTSDGRI 245

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
             WG    G LG G     S P +V  L    K + V+ G   +  + +DG VY++G   
Sbjct: 246 YAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS 305

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG+       G   A+ + P  VT L  V      +S   S      + ALT  G +
Sbjct: 306 YGQLGN-------GTTTASEM-PVQVTGLANVTA----VSAGGS-----DSLALTSDGYV 348

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           YA+G    GQLG    +N   R  P RV
Sbjct: 349 YAWGLNSSGQLGDGTTSN---RNTPVRV 373



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 264
           ++AG  + L L    S   V++ G    G+LG G+ T  + P   +        P V  V
Sbjct: 75  VSAGGSHSLVLT---SDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGL------PSVAQV 125

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV-ATGDYTT 323
           +AG  H+  +  DGRV  WG    G LG G       P  VQ L     I V A G   +
Sbjct: 126 SAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHS 185

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             ++ DG V+++G   S  LG+N+  D                S   V  + +  ++T  
Sbjct: 186 LALTSDGRVFAWGKNSSGQLGNNSTVD----------------SSIPVQVQGLPANVTAV 229

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
                H+ ALT  G++YA+G    GQLG    +N +
Sbjct: 230 AAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSS 265


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 25/288 (8%)

Query: 54  HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
           HS AVT  G +Y++G  +++ G LGHG     W P+ +   L+G+R+   A G   T+L+
Sbjct: 186 HSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLV 245

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSR 166
           +  GQ+++FG  +FG   +G +  K  + P+ VESLK +  ++AA G + TA    V+SR
Sbjct: 246 TSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSR 303

Query: 167 --------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
                    G+++T+  G+  RLGH  +   + P   +  L +    Q+A G+   +AL 
Sbjct: 304 YSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAALVDHNFRQVACGHSLTVALT 362

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              +   +Y++G    G+LG    T     RL    +L       V+ GA+H A +   G
Sbjct: 363 ---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRTLIEEVSCGAYHVAALTSKG 415

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            VCTWG G  G LGHG+ E   VP +V+AL D +   V+ G   T  +
Sbjct: 416 DVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR +RSL  + + Q A G     L++  G+V+++G++S G   +GV     V  PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L +  V   A G + +  +++ G +YT+  G  N   LGH    +   P  + G LE + 
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVR 231

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A G  + + +    S   ++S G G  G LGHG R     PR +E  +   L+ + 
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVESLK--GLKTLR 286

Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            A G WH A V +             G++ TWG G    LGHG++E + VP  V AL D 
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  ++  G +Y+ G     S+ +  + D Q        T +L   L+  
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMG-----SVSYGQLGDPQA-------TGRLPGVLRLG 394

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              + ++S     Y   H  ALT  G +  +G G  G+LG
Sbjct: 395 RTLIEEVSC--GAY---HVAALTSKGDVCTWGKGANGRLG 429



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 20/229 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H++ VTS G ++SFG  + G LGHG  +    PR + SL+G++ ++AA G  
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292

Query: 106 RTMLI------------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  +            S +G+++ +G        +G +  KLV  P  V +L +    Q
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQ 350

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  T  L+  G +YT    +  +LG   +P      P +  L    + +++ G  +
Sbjct: 351 VACGHSLTVALTTTGHLYTMGSVSYGQLG---DPQATGRLPGVLRLGRTLIEEVSCGAYH 407

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
           + AL    S   V + G G  G+LGHG   D   P L+E  +   ++ V
Sbjct: 408 VAALT---SKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKV 453



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 14/176 (7%)

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           KL    RTD   PR +    +L++Q   +A G  HAA+V + G V +WG    G LGHG 
Sbjct: 102 KLDTSFRTDAFLPRAVRSLVVLDVQ--QIACGVRHAALVTRQGEVFSWGEESGGRLGHGV 159

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
           +   + P+++ +L      +VA G+Y +  V++ GD+Y++G G      HN    G GN 
Sbjct: 160 DADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT-----HNFGLLGHGNN 214

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  TP+ V    +     V++S      W  HT  +T +G+L++FG G  G LG
Sbjct: 215 ISH-WTPKRVGGPLE----GVRVSSVACGPW--HTVLVTSTGQLFSFGDGTFGVLG 263


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+A  G   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G VY++GCG  A LG        G+  A  L P+L+  L     R+V IS+ +S     
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H  AL+   ++YA+G    GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4197

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4255

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 4316 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4352



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)

Query: 45  NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
           ++Q I AG   +  +++ G V + G  S G+LG G     +T ++    P RS++  ++ 
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
            +    G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   VV  + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G  + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           +    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  +  +   
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632

Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4180

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 4181 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4238

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 4239 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4290

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 4291 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4345

Query: 270  HAA 272
            H+A
Sbjct: 4346 HSA 4348



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4080

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4138

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4139 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4194

Query: 276  QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG V   +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4195 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4255 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4299

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4300 STGDVYAWGSNSEGQLGLGHTNHVRE 4325



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4158

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G  ++AFG 
Sbjct: 4159 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4205

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 4206 GDYGKLGL---GNSTAKSSPQKVDV 4227



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H+IA++  G  V+SFG   +G+LGHG T   ++P+ I +LQG+ I +  AG+  ++ 
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  GQVYA+G  +    G +E     T L   P+L+E L    +V  +IG+     LS 
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +  VY  +WGN++      G+ T P   +P  + G L+ I + QI+AG  + LA    P 
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738

Query: 223 GMAV 226
              V
Sbjct: 739 DRQV 742


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDYKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYFPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ +   G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYK 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E     P 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+   G+        P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 7   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 66

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 67  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 122

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 123 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 182

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 183 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 238

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 239 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 295

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 296 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 332



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 38/325 (11%)

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           RTML         +G  S G+         +V  PQ+   + +  V + A G   +  L 
Sbjct: 3   RTML--------CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL 54

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G VYT       +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     
Sbjct: 55  EDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ--- 108

Query: 226 VYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
           ++S G G  G+LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TW
Sbjct: 109 LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTW 165

Query: 284 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           G   +G LG G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  
Sbjct: 166 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 225

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG +   D +   H  +L  Q          +VV IS         HT  LT+SG ++ F
Sbjct: 226 LGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTF 270

Query: 403 GAGDKGQLGIELVNNQTERGNPERV 427
           GAG  GQLG + +N++    NP RV
Sbjct: 271 GAGSCGQLGHDSMNDEV---NPRRV 292



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 95

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 96  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 156 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 210

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 271 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 315

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 316 SSGLIYAFGCGARGQLG 332



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 145 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 204

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 205 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 319

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 320 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 348



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 96  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 156 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 214

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 215 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 270

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 271 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 328

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 329 GQLGTGHTCNVKCPSPVK 346



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 197 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 256

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 257 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 314

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 315 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 347


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)

Query: 42   RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
            RR +  A++  G S        +Y +G N  GQLG         P P  +L  +R +Q A
Sbjct: 1784 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 1836

Query: 102  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 159
             G      ++  G+++A G  S G    G   +  +  P L+ SL+++FV + A+  G  
Sbjct: 1837 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 1894

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
                L+ EG VY +  G D +LGH    +   P  L+  L  + V  IA G  +  A+  
Sbjct: 1895 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA 1953

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 277
              SG  V + G G  G+LGHG   D+  P+L+E   LL  + + +A G+  A    +  D
Sbjct: 1954 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 2008

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
              V +WG G YG LG G  +   +P  +++L  +  + V  G   +  +++ G VY++G 
Sbjct: 2009 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGK 2068

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
            G+   LGH ++         +V  P+ V +L+   ++++ I+ T S+    H  A ++SG
Sbjct: 2069 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 2113

Query: 398  KLYAFGAGDKGQLG 411
            ++Y +G  D+GQLG
Sbjct: 2114 EVYTWGDNDEGQLG 2127



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 176/380 (46%), Gaps = 31/380 (8%)

Query: 36   AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
            AG       + +A A P   +  T    V  +G N   QLG     +   P   +++  +
Sbjct: 710  AGAGAVSTAHEEAGAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 765

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            R I  A G+    ++S  G+VYA G+ + G    GV  T  V  P  +  L    V + A
Sbjct: 766  RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVA 823

Query: 156  I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            +  G      L+ +G+V+++  G D +LGH       +P  L+  L    +  +A G  +
Sbjct: 824  VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 882

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
              A++ Q     +Y+ G G  G+LGHG    +  P+L+    L   + V VA G+  A  
Sbjct: 883  SAAISSQGE---LYTWGLGEYGRLGHGDNATQLKPKLVTA--LAGRRVVQVACGSRDAQT 937

Query: 274  VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
            +   +DG V +WG G +G LG G  E    P  ++ L+ +  + +  G   +  ++  G+
Sbjct: 938  LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 997

Query: 332  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
            V+++G G+   LGH       G++H  V  PQ +  L+    RV+ +++        H  
Sbjct: 998  VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 1042

Query: 392  ALTESGKLYAFGAGDKGQLG 411
            A+T++G++YA+G  D GQ G
Sbjct: 1043 AVTDAGQVYAWGDNDHGQQG 1062



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 154/342 (45%), Gaps = 22/342 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +PR + +L+  +I   A G+  +  
Sbjct: 826  SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 885

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            IS  G++Y +G   +G   +G   T+L   P+LV +L    VVQ A G  +  T  L+ +
Sbjct: 886  ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 943

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G V+++  G+  +LG         PH  +  L  I VVQI  G  + LAL        V+
Sbjct: 944  GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 999

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG     + P+ I   +    + + VA GA H   V   G+V  WG   
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 1057

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-----VSEDGDVYSFGCGESAS 342
            +G  G GN      P +V  L+ V    VA G   +        S D +       +   
Sbjct: 1058 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASTDEE-------KRGP 1110

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +   +  D  G     +   + V +LKQ  + + Q SL+ S+
Sbjct: 1111 VPFGSTRDPLGGSSLGIYEAETVQTLKQEAKPLNQSSLSESL 1152



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 1843 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 1902

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 1903 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 1960

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 1961 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 2018

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  V V  G+  +  + + G V TWG G +  LGH
Sbjct: 2019 YGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 2076

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 2077 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 2135

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 2136 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 2164



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA   ++      G  HS A++S+G +Y++G    G+LGHG    + +P+ + +L G R+
Sbjct: 866  EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRV 925

Query: 98   IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +Q A G+   +T+ +++ G V+++G   FG  + G  G++   +P  +E L  I VVQ  
Sbjct: 926  VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 983

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G  F+  L+R G V+T+  G+  RLGH  + +  +P P +G L    V+ +A G  + L
Sbjct: 984  CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 1042

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
            A+        VY+ G    G+ G G+    K P L+
Sbjct: 1043 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 1075



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 981  QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 1040

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 1041 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 1090



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 793

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
           +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 794 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 840

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVD 428
           +++G G+ G+LG     N+T    P  V+
Sbjct: 841 FSWGEGEDGKLGH---GNRTTLDKPRLVE 866


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        LR ++A    C     R   +   G  H + +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 30/312 (9%)

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G  S G+   G     +V  PQ    + +  V + A G      L  +G VYT      
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH  E N  E    +G L +  ++ +A G  + LAL+ Q     ++S G G  G+LG
Sbjct: 64  GQLGHEREGNQPEQ---IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLG 117

Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
             +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKE 174

Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
              ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +   
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 416 NNQTERGNPERV 427
           N++    NP RV
Sbjct: 280 NDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 32/320 (10%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G    + + + G+VY  G ++ G+  +  +G +    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           LA   +    ++ G    G+LG G    S+T  +  R +E   L       VAAG  H+ 
Sbjct: 152 LA---TDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSF 203

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           ++FG G    LGH+++ D    R            L+ +   V QI+         HT A
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLA 308

Query: 393 LT-ESGKLYAFGAGDKGQLG 411
               SG +YAFG G +GQLG
Sbjct: 309 FVPSSGLIYAFGCGARGQLG 328



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LATDGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4225 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4284

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +
Sbjct: 4285 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4342

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4343 LGHGNRVSYDRPK-LVEHLHGMSVADIACGSAHSAAITA--SGQ-VLTWGKGRYGRLGHG 4398

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4399 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4456

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4457 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4508

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4509 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 4554



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 17/353 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ + S+ G V++ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 3112 IAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGK 3171

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+ VE+L+   +   A G+  +A +S
Sbjct: 3172 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRQVEALRAKKIRDVACGSSHSAAIS 3229

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G      LA    G A
Sbjct: 3230 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVVQVACGSRDAQTLALTEDG-A 3287

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  + +  GA  +  + + G V TWG 
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3345

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ--- 3402

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
                 G GN   N   P LV  L  V    V    ++SI W      + E  +
Sbjct: 3403 ----QGSGNTFVNK-KPALVIGLDDVFVNRVACGSSHSIAWGLPNATMEEEKR 3450



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 167/358 (46%), Gaps = 37/358 (10%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P   +++  +R I  A G+    ++S  G+V+A G+ 
Sbjct: 3075 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEG 3134

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 3135 TNGRLGLGV--TYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3192

Query: 181  LGHHT-----EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            LGH       +P  VE       L    +  +A G  +  A++ Q     +Y+ G G  G
Sbjct: 3193 LGHGNRTTLDKPRQVE------ALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYG 3243

Query: 236  KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGH 293
            +LGHG    +  P+L+    L   + V VA G+  A  +   +DG V +WG G +G LG 
Sbjct: 3244 RLGHGDNATQLKPKLVAA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR 3301

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G  E    P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G
Sbjct: 3302 GGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------G 3355

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++H  V  PQ +  L+    RV+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3356 DQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3404



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 164/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4270 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4329

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G+V T+
Sbjct: 4330 GEVYAWGEGEDGKLGHGNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTW 4387

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4388 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4445

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE    L +  + V  G+  +  + + G V TWG G +  LGH
Sbjct: 4446 YGKLGRGGSDGCKLPYKIESLAGLGV--IKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4503

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4504 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 4562

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV++L+   + +V+++       +AHT AL+ S
Sbjct: 4563 -------RPRLVSALQ--GKHIVKVTCG-----SAHTLALSTS 4591



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 37/334 (11%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFV 151
            ++ Q      + +L+S  G+++A+ + S  EAE           PQ +E   +   I +
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAW-RLSKPEAE-----------PQPLEEAGHETFISI 634

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
                G  F A+ S     Y++  G D RLGH        P  +   LE   V  +  G 
Sbjct: 635 AGHCEGRHFMAIDSNHN-AYSWGAGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVFCGC 692

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            Y   + C   G  + + G G   +LGHG+  D   P L+       +  V + +G  H+
Sbjct: 693 TYSAVITC---GGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHS 749

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +  +G V  WG G YG LG+GN      P +V++L  V+ I    G   +  +S +G 
Sbjct: 750 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA--GSQYSVALSSEGQ 807

Query: 332 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           VY++  G++  LGH  +    QG        P+LV+SL+  ++R+V +++       AH 
Sbjct: 808 VYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDMAVG-----VAHC 853

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
            AL+ SG+++ +G  D  Q+    V+++    +P
Sbjct: 854 LALSSSGEVFGWGRNDCQQVCPSSVSSEPLLRSP 887



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 19/168 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+A+TS+G+V+++G    G+LG+G      +P  + SL   R+ +  AG+  ++ 
Sbjct: 744 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRIFAGSQYSVA 801

Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +S  GQVY +GK +  G    E  VQG  +   P+LV SL++  +V  A+G      LS 
Sbjct: 802 LSSEGQVYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDMAVGVAHCLALSS 858

Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT-----LENIPVVQIA 208
            G V  F WG ND +      P+ V   PLL +     L  +P   IA
Sbjct: 859 SGEV--FGWGRNDCQ---QVCPSSVSSEPLLRSPILVALPTLPASGIA 901



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3323 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3382

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D+GQVYA+G +  G+   G   T +   P LV  L ++FV + A G+
Sbjct: 3383 CLAVTDSGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDDVFVNRVACGS 3432



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 18/242 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+ S    YS+G+    +LGHG T     P  I +L+   +     G   + +I+  
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G +  +G+ ++    +G    + +  P LV +L    VV  A+  G+  +  L+ EG V+
Sbjct: 702 GNLLTWGRGTYARLGHGNSDDRCL--PTLVAALAEHTVVDVALGSGDAHSLALTSEGLVF 759

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+      ++P      +E++P VQ I AG  Y +AL+   S   VY+ G
Sbjct: 760 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRIFAGSQYSVALS---SEGQVYTWG 812

Query: 231 CG--LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
               LG +L   S      PRL+   Q   +  V +A G  H   +   G V  +GWGR 
Sbjct: 813 KATCLGHQLVERSVQGCSVPRLVSSLQHKRI--VDMAVGVAHCLALSSSGEV--FGWGRN 868

Query: 289 GC 290
            C
Sbjct: 869 DC 870



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS++G V++ G G 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  LG             NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3136 NGRLGLGVT--------YNVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3182

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P +V+
Sbjct: 3183 FSWGEGEDGKLG---HGNRTTLDKPRQVE 3208


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDYKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYFPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ +   G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYK 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E     P 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+   G+        P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +QIAAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + +AAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G   +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GYC+ LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P     L ++ V Q A       +LSR GRVYT ++ +DA          + P  L+
Sbjct: 440 VIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDA----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA       VYS GCG GG+LGHG     + P+LI  
Sbjct: 489 QGLVSRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKLISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +    + V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+LV  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLVEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + + Q A    R +++S +G+VY  A+  D+               +PQLV+ L  +
Sbjct: 449 LASLGVSQIACAEKRFLILSRSGRVYTQAYSSDAL--------------APQLVQGLVSR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G VY++  G+  RLGH       EP       G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 116/185 (62%), Gaps = 9/185 (4%)

Query: 39  ACCRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           A C ++  Q +     G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G
Sbjct: 544 AFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG 603

Query: 95  IRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
           +++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    +P+LVE L+++ VV
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDVV 661

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           +   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGST 720

Query: 213 YLLAL 217
           + LAL
Sbjct: 721 HCLAL 725



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL----QGIRIIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +      G R++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 44/72 (61%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   S+A+T  G VYS+G   + +LGHGT E    P+ +  LQG ++I  AAG+   + +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 111 SDAGQVYAFGKD 122
           ++  +V+++G +
Sbjct: 726 TEDSEVHSWGSN 737


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +QIAAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + +AAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 12/355 (3%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G++YA G 
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             +      G+ GT+ V++P L+ES++++F+ + A+  G      LS EG VY++    D 
Sbjct: 3817 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3874

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH        P  ++ +L  + VV IAAG  +    AC  +   +++ G G  G+LGH
Sbjct: 3875 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 3930

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            G   D+  P+L++  Q   +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 3931 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 3990

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
              P  + +L  +  I V  G   +  +++ G VY++G G+   LGH +    +  R    
Sbjct: 3991 KTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG 4050

Query: 360  LTPQLVTSLKQVNERVVQISLTNSI---YWNAHTFALTESGKLYAFGAGDKGQLG 411
            L  + V ++   +   V  +    I    W    ++L   G++Y +G  D+GQLG
Sbjct: 4051 LQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLG-LGEVYTWGDNDEGQLG 4104



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 26/357 (7%)

Query: 59   TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
            T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G++YA
Sbjct: 2727 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 2786

Query: 119  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
             G+ + G    G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++  G
Sbjct: 2787 CGEATNGRLGLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 2845

Query: 177  NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            +D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+
Sbjct: 2846 DDGKLGHFSRMNCDKPR-LIEALKAKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 2901

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
            LGHG  T +  P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2959

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH         
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT------- 3012

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3013 -DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3061



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 25/378 (6%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3785 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3844

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P+++ESL+ + VV  A
Sbjct: 3845 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 3902

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G ++T+  G   RLGH    + ++P  L+  L+   V+ +A G     
Sbjct: 3903 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 3961

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L      M V+S G G  GKLG G     K P  I+   L  L  + V  G+  +  + 
Sbjct: 3962 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKTPMKID--SLTGLGVIKVECGSQFSVALT 4018

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV--- 332
            + G V TWG G Y  LGHG+++    P+ VQ L   K I +ATG       +EDG +   
Sbjct: 4019 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVF 4078

Query: 333  ------YSFGCGESASLGHN---AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
                  +S G GE  + G N    + DG  N    +  P+LV +L+      V     ++
Sbjct: 4079 QWGLPRWSLGLGEVYTWGDNDEGQLGDGTTN---AIQRPRLVAALQGKKINRVACGSAHT 4135

Query: 384  IYWNAHTFALTESGKLYA 401
            + W+  T   T +GKL A
Sbjct: 4136 LSWS--TSKPTNAGKLPA 4151



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 39/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
           P   +SL  + + Q        +++S +G VY              Q  K  T +P L+ 
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 451

Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 198
           SL +  +V+ A    G  + A LS  G V+++  G+  RLGH       EP  +    G 
Sbjct: 452 SLSSRKMVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGK 510

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y  A+        +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 511 QAGKHVVHIACGSTYSAAITVDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 567

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  
Sbjct: 568 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 627

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VY++G G++  LGH            +V  P+L+ +L+   ++VV +
Sbjct: 628 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRFPKLLDTLQ--GKKVVDV 677

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           ++ ++     H  ALT+ G+++++G+ DK Q    L +N+ +
Sbjct: 678 AVGST-----HCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQ 714



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 40/293 (13%)

Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +G+ G KL   V  P   +SL ++ V Q         +LS  G VYT ++ +        
Sbjct: 391 WGLLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKS-------- 442

Query: 186 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
               + P  L+ +L +  +V++AA   G  Y LAL+   S   V+S GCG GG+LGHG  
Sbjct: 443 --TTLAPM-LIHSLSSRKMVKLAAHPDGQHY-LALS---SNGEVFSWGCGDGGRLGHGDT 495

Query: 243 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           T  + P +I  F  +      V +A G+ ++A +  DG + TWG G YG LGHG+ E ++
Sbjct: 496 TYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQT 555

Query: 301 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            P +V AL  +K + VA  +GD  T  V+E+G V+S+G G+   LG    +DG       
Sbjct: 556 TPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG------- 607

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             TP+LV  L+ ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 608 CKTPKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 653



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G +Y++G  + G+LGHG++E++  P  + +L+G++++  A G+G  +T+
Sbjct: 522 GSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G  + G  G+    +P+LVE L+++ +V+   G+ F+  L+++G
Sbjct: 582 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 639

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VYT+  G++ RLGH T+ +   P  LL TL+   VV +A G  + LAL
Sbjct: 640 QVYTWGKGDNQRLGHGTDEHVRFPK-LLDTLQGKKVVDVAVGSTHCLAL 687



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 142/294 (48%), Gaps = 11/294 (3%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQAAAG 103
            Q   G     AVT +G +Y+ G  ++G+LG G +      PR I +L    ++ +   +G
Sbjct: 2767 QVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSG 2826

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  +A 
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAA 2884

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++  G +Y++  G   RLGH      + P  L+  L    V+Q+A G      LA    G
Sbjct: 2885 ITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALTDEG 2943

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
            + V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G V T
Sbjct: 2944 L-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGVVWT 2999

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            WG G Y  LGHG +     P++V+ L   K +HVA G      V++ G VY++G
Sbjct: 3000 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3053



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 2825 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAA 2884

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y++G   +G   +G   T+L   P+LV+ L    V+Q A G  +  T  L+ E
Sbjct: 2885 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 2942

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 2943 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2994

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 2995 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3051

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3088



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 22/284 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A++S G V+S+G    G+LGHG T     P  I +  G +    ++  A G+  +  
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAA 528

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T+P LV +LK + VV  A   G+  T  ++  
Sbjct: 529 ITVDGELYTWGRGNYGRLGHGSSEDQ--TTPMLVTALKGLKVVDVACGSGDAQTLAVTEN 586

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ +V++  G  + +AL        VY
Sbjct: 587 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 642

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG--- 284
           + G G   +LGHG+    + P+L++  Q    + V VA G+ H   +  DG V +WG   
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTLQ--GKKVVDVAVGSTHCLALTDDGEVHSWGSND 700

Query: 285 -WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
               +  L    ++    PK +  LN    + ++ G   +F  S
Sbjct: 701 KLQHFDTLFSNKKQ----PKALPGLNSKHIVGISCGPGQSFAWS 740



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 163  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 3806

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3807 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3865

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 3866 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 3925

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 3926 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 3972

Query: 401  AFGAGDKGQLG 411
            ++G GD G+LG
Sbjct: 3973 SWGDGDYGKLG 3983



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 9/164 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ +  LQ + I++   G+  ++ 
Sbjct: 575 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 634

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  GQVY +GK   G+ +    GT + V  P+L+++L+   VV  A+G+     L+ +G
Sbjct: 635 LTKDGQVYTWGK---GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDG 691

Query: 169 RVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAG 210
            V+  SWG++ +L H      N  +P  L G L +  +V I+ G
Sbjct: 692 EVH--SWGSNDKLQHFDTLFSNKKQPKALPG-LNSKHIVGISCG 732



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 2973 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3027

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3028 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3085

Query: 155  AIGN 158
            A G+
Sbjct: 3086 ACGS 3089


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 172/357 (48%), Gaps = 36/357 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    P  I       + Q A G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
           +   +      G +L T  P L+  L++  V+Q + G+  +  LS  G+V   SWG++  
Sbjct: 67  NDHSQL-----GHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQV--LSWGDNDC 119

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH T+   V+   ++  L +  VVQIA G  + LAL    S   +YS G  + G+LG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 176

Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 295
             S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLND 234

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
           E   + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH          
Sbjct: 235 EANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF-------- 286

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
            +N + P++V  L  +   + Q++  N      HT AL  S G++YAFG G  GQLG
Sbjct: 287 SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 21/306 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP  I  LQ   +IQ + G+  
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTK--RPLLIPELQDYVVIQISCGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +S+ GQV ++G +  G+  +     ++V  P++V  L +  VVQ A GN  +  L+ 
Sbjct: 102 SLALSEWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
            G +Y  SWG++   +LG ++ P D+    +PL L TL  IP+  IA G  + +L++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG AV+  G    G+LG     +  +P  ++  + L ++   VA G   +  +  +G 
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330

Query: 339 ESASLG 344
            S  LG
Sbjct: 331 SSGQLG 336



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 94  QISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G  + GV   K +T    P  + +L  I +   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  +  
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDEANRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GRV 
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GRVY F  G+  +LG  +  + + P  ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +  +G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTANGK 60

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   +  LGH  E     P ++  L D   I ++ G   +  +SE G V S+G  +
Sbjct: 61  VYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDND 118

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH             V  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG+    + T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPKDLTHCNYPLRL 192


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            G   A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++ 
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
             G+VYA G+ + G    G+  +  V  P+ + +L N  V + A+  G      L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3069

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +++  G+D +LGH +  N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3125

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
             G  G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G+   LGH   
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3242

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +V  PQ+V  L+   +++V +++        H  A+T++G++YA+G  D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3288

Query: 409  QLG 411
            Q G
Sbjct: 3289 QQG 3291



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 148/282 (52%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   E L N+ + Q A       +LSR GRVY  ++ +D  LG            L+
Sbjct: 440 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDT-LGPQ----------LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 39/325 (12%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
           L  + I Q A    R +++S  G+VY  A+  D+ G              PQLV+ L  +
Sbjct: 449 LANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLG--------------PQLVQGLASR 494

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
           NI  + A         L+  G V+++  G+  RLGH       EP     L G      V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L +  V  
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  G   + 
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +++DG VYS+G G++  LGH            +V  P+L+  L+   ++VV ++  ++ 
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVVDVAAGST- 720

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
               H  ALTE  +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    ++ +  
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3053

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             +G    M ++  G+V+++G+   G+   G         P+L+E+LK   +   A G+  
Sbjct: 3054 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +A ++  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA  
Sbjct: 3112 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3170

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 3171 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3226

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG +     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 3227 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3283



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E++  P  +  L+G+++I  + G+G  +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ GQV+++G   +G+   G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   VV +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVVDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGH +     +PR I +L+  RI   A G+  +  
Sbjct: 3055 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P++V+ L    V+Q A G  +  T  L+ E
Sbjct: 3115 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172

Query: 168  GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G V+++  G+  +LG         P ++E       L    V QI  G  + LAL    S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            G+ V++ G G   +LGHG+    + P+++E  +   +  V VA GA H   V   G+V  
Sbjct: 3225 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3281

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG   +G  G+G       P +VQ L   K   VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G V+S+G    G+LGHG T     P+ I +L G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G++Y +G+ ++G   +G    +  T P LV  LK + V+  +   G+  T  ++  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + V VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVVDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P  +  L+    + +A G   +F  S
Sbjct: 736 ------SNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 38/253 (15%)

Query: 62   GVVYSFGSNSSGQLG--HGTTEEEWRP-------RPIR------------------SLQG 94
            G +Y +G N  GQLG   G   +   P       RPI+                  +LQG
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 95   IRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
             R+I  A G+G  +T+ ++D   V+++G   +G+   G  G+     P  ++SL  + VV
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVV 4072

Query: 153  QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
            +   G+ F+  L++ G VYT+  G+  RLGH ++ +   P  + G L+   V+ IA G  
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSL 4131

Query: 213  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG---AW 269
            +   + C   G  VY+ G    G+LG G+    + PRL+   Q   +  V   +    AW
Sbjct: 4132 H--CVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4188

Query: 270  HAAVVGQDGRVCT 282
              +     G++ T
Sbjct: 4189 STSKPANAGKLPT 4201



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 41/262 (15%)

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            +G +Y +G +  G+   G++G K V  P   E+L  +  +Q   G      ++ +G+V  
Sbjct: 3954 SGTIYGWGHNHRGQLG-GIEGAK-VKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEA 4011

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                                      L+   V+ IA G      L C      V+S G G
Sbjct: 4012 --------------------------LQGYRVIDIACGSGDAQTL-CLTDDDTVWSWGDG 4044

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG G Y  LG
Sbjct: 4045 DYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4102

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            HG+++    P+ VQ L   K I +ATG       +EDG+VY++G  +   LG     DG 
Sbjct: 4103 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-----DGT 4157

Query: 353  GNRHANVLTPQLVTSL--KQVN 372
             N    +  P+LV +L  K++N
Sbjct: 4158 TN---AIQRPRLVAALQGKKIN 4176



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++AVT  G V+S+G    G+LG G ++    P+ I  LQ + +++   G+  ++ 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY++GK       +G +  + V  P+L+E L+   VV  A G+     L+ +  
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
           V+  SWG++ +  H       +P P  L  L+   +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHGT     +P+ +  L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3257

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++D GQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315

Query: 155  AIGN 158
            A G+
Sbjct: 3316 ACGS 3319



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G   ++ +T    V+S+G    G+LG G ++    P  I SL G+ +++   G+  ++ 
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVA 4083

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            ++ +G VY +GK  +    +G      V  P+ V+ L+   V+  A G+      + +G 
Sbjct: 4084 LTKSGAVYTWGKGDYHRLGHG--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
            VYT+   ++ +LG  T  N ++   L+  L+   + ++A G  + LA
Sbjct: 4142 VYTWGDNDEGQLGDGTT-NAIQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G   S+A+T  G VY++G     +LGHG+ +   RPR ++ LQG ++I  A G+   +  
Sbjct: 4077 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC 4136

Query: 111  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ G+VY +G +   E + G   T  +  P+LV +L+   + + A G+  T   S
Sbjct: 4137 TEDGEVYTWGDND--EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4189



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 251  IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            +E  Q   +  +   +G      +  D  V +WG G YG LG G  +   VP  + +L  
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 311  VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
            +  + V  G   +  +++ G VY++G G+   LGH +          +V  P+ V  L+ 
Sbjct: 4069 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ- 4119

Query: 371  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4120 -GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4154



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 17/122 (13%)

Query: 302 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           P++VQ L     + +A  +  +    ++  G+V+S+GCG+   LGH      +       
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 537

Query: 360 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
             P+++++L  KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +
Sbjct: 538 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 591

Query: 418 QT 419
           QT
Sbjct: 592 QT 593


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +QIAAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + +AAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 15/301 (4%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ ++D 
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDK 102

Query: 114 GQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           GQVYA+G DS  + + G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   V+ 
Sbjct: 103 GQVYAWGLDS--DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 230
           +      +LG   +        L+ +L  IP +Q+AAG  + ++L L+      A++  G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G G YG 
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG  + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333

Query: 350 D 350
           +
Sbjct: 334 N 334



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKE---GGVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P  I +L    I+  A 
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 170

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G  + G+  T+  V  P+L++ L    ++Q + GN+  
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 228

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+  
Sbjct: 229 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSL- 286

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 287 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 341

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG
Sbjct: 342 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 339 ESASLG 344
               LG
Sbjct: 402 ARGQLG 407



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 40/340 (11%)

Query: 93  QGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           Q IR+   A+G    RTML         +G  S G+         +V  PQ+   + +  
Sbjct: 63  QWIRLWTLASGLDSIRTML--------CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRS 114

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           V + A G   +  L  +G VYT       +LGH  E N  E    +G L +  +V +A G
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIVHVACG 171

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGA 268
             + LAL+ +     ++S G G  G+LG  +  D    PRLI++   LN Q ++ V+ G 
Sbjct: 172 ESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGN 225

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  +    VA G   +F +S
Sbjct: 226 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 285

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
             G V+ +G   +  LG +   D +   H  +L  Q          +VV IS        
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ----------KVVYISCGEE---- 331

Query: 388 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 332 -HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 367



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 170

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 231 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 285

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 346 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 390

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 391 SSGLIYAFGCGARGQLG 407



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 220 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 279

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 280 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 394

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 395 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 423



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 231 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 289

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 290 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 345

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 346 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 403

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 404 GQLGTGHTCNVKCPSPVK 421



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 272 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 331

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 332 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 389

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 390 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 422


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P  I +L    I+  A 
Sbjct: 488 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 545

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G  + G+  T+  V  P+L++ L    ++Q + GN+  
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 603

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+  
Sbjct: 604 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQ-RVRSLEGIPLAQVAAGGAHSFALSL- 661

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 662 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 716

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG
Sbjct: 717 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 339 ESASLG 344
               LG
Sbjct: 777 ARGQLG 782



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 38/325 (11%)

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           RTML         +G  S G+         +V  PQ+   + +  V + A G   +  L 
Sbjct: 453 RTML--------CWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL 504

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G VYT       +LGH  E N  E    +G L +  +V +A G  + LAL+       
Sbjct: 505 EDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALS---DRGQ 558

Query: 226 VYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
           ++S G G  G+LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TW
Sbjct: 559 LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTW 615

Query: 284 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           G   +G LG G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  
Sbjct: 616 GKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 675

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG +   D +   H  +L  Q          +VV IS         HT  LT+SG ++ F
Sbjct: 676 LGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTF 720

Query: 403 GAGDKGQLGIELVNNQTERGNPERV 427
           GAG  GQLG + +N++    NP RV
Sbjct: 721 GAGSCGQLGHDSMNDEV---NPRRV 742



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 32/320 (10%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 545

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605

Query: 217 LACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           LA   +    ++ G    G+LG G    S+T  +  R +E   L       VAAG  H+ 
Sbjct: 606 LA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSF 657

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V
Sbjct: 658 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           ++FG G    LGH+++ D    R            L+ +   V QI+         HT A
Sbjct: 718 FTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLA 762

Query: 393 LT-ESGKLYAFGAGDKGQLG 411
               SG +YAFG G +GQLG
Sbjct: 763 FVPSSGLIYAFGCGARGQLG 782



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 595 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 654

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 713 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 769

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 770 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 798



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 127/255 (49%), Gaps = 12/255 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +     TSPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 606 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 664

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 665 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 720

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 721 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 778

Query: 289 GCLGHG---NEECES 300
           G LG G   N +C S
Sbjct: 779 GQLGTGHTCNVKCPS 793



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 706

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 707 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 764

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 765 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 797


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ + G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  FSWG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q + G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+++G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFSWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ++ GY + LAL+       V+S G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALS---KASEVFSWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+S+G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G KGQLG
Sbjct: 312 SSGLIYAFGCGAKGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 20/262 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++  GQ + +GK+S G+     EY  Q      SPQ V SL+ I + Q A G   +  LS
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQA-----SPQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-G 262

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 285 WGRYGCLGHG---NEECESVPK 303
            G  G LG G   N +C S  K
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVK 342



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +QIAAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + +AAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +QIAAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + +AAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 166/337 (49%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    II  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 TTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ ++G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L   G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLTTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT++G ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V++++G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L        V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT---KNGGVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++  G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 142/299 (47%), Gaps = 35/299 (11%)

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           + +L+   VV  + G   + VL+ EGRV++F  G   RLGH  E    EP  +       
Sbjct: 31  IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTA 90

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----------- 251
            V +I+AG  + LAL     G A YS G G+ G+LGHG  TD+  PR I           
Sbjct: 91  GVAKISAGTTHSLALT--KDGKA-YSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPV 147

Query: 252 -EQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            ++ +     PV+  VAAG +H+ ++  DGRV ++G G  G LGHG+ +    P +++AL
Sbjct: 148 GDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEAL 207

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D + + +A G   T V+ ++G V+ FG   S         +GQ      VL P  +   
Sbjct: 208 ADRRIVSMACGSANTLVLDDEGRVFFFGLDYSE---FPKFTEGQAR---FVLLPSALGLA 261

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           +++ E               H   LT  GKL AFG G  G+LG+    ++T R  P  V
Sbjct: 262 EEITEVRA---------GEGHCLLLTREGKLLAFGLGKNGRLGL---GDETNRLAPTAV 308



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 44/373 (11%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           +GVV S G    G LG G    +     PIR+L+  R++  +AG   ++++++ G+V++F
Sbjct: 2   RGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSF 61

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGND 178
           G    G   +G + T     P+ +        V + + G   +  L+++G+ Y+F +G  
Sbjct: 62  GNGLHGRLGHGNEETCF--EPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 179 ARLGHHTEPNDVEPH----------PLLGTL----ENIPVVQ-IAAGYCYLLALACQPSG 223
            RLGH  E + + P           P +G      E  PV++ +AAGY + L L      
Sbjct: 120 GRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR- 178

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             VYS G G+ G LGHG R     P +IE   L + + V +A G+ +  V+  +GRV  +
Sbjct: 179 --VYSFGAGVMGALGHGDRDKRLRPTMIE--ALADRRIVSMACGSANTLVLDDEGRVFFF 234

Query: 284 G--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           G  +  +     G      +P  +    ++  +    G     +++ +G + +FG G++ 
Sbjct: 235 GLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGH--CLLLTREGKLLAFGLGKNG 292

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT----ESG 397
            LG   + D       N L P  VT         V+I +        H  AL     E  
Sbjct: 293 RLG---LGD-----ETNRLAPTAVT-FPSNGTTSVEIDIA---CGAKHGLALVDVPGEGP 340

Query: 398 KLYAFGAGDKGQL 410
           +LYAFG+GD+GQL
Sbjct: 341 RLYAFGSGDQGQL 353



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 21/238 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ +T+ G VYSFG+   G LGHG  ++  RP  I +L   RI+  A G+  T++
Sbjct: 165 AGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLV 224

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + D G+V+ FG D     ++     + V  P  +   + I  V+A  G+    +L+REG+
Sbjct: 225 LDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCL--LLTREGK 282

Query: 170 VYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQIAAGYCYLLALACQP-SGM 224
           +  F  G + RLG   E N + P     P  GT      + IA G  + LAL   P  G 
Sbjct: 283 LLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTS--VEIDIACGAKHGLALVDVPGEGP 340

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPR--------LIEQFQLLNLQPVVVAAGAWHAAVV 274
            +Y+ G G  G+L +G R D   P         L+ Q    ++ P  ++AG  H+ V+
Sbjct: 341 RLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQ----HIVPAAISAGKAHSLVL 394



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 32/318 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 108
           AG  HS+ +T +G V+SFG+   G+LGHG  E  + PR I        + + +AG   ++
Sbjct: 44  AGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSL 103

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLV----------TSP----QLVESLKNIFVVQA 154
            ++  G+ Y+FG   FG   +G +  +L+           SP    ++ E+  +  +   
Sbjct: 104 ALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHV 163

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           A G F + +L+ +GRVY+F  G    LGH      + P  ++  L +  +V +A G    
Sbjct: 164 AAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRP-TMIEALADRRIVSMACGSANT 222

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAA 272
           L L     G   +      G       +  E   R +     L L   +  V AG  H  
Sbjct: 223 LVL--DDEGRVFF-----FGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCL 275

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA---IHVATGDYTTF----V 325
           ++ ++G++  +G G+ G LG G+E     P  V   ++      I +A G         V
Sbjct: 276 LLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDV 335

Query: 326 VSEDGDVYSFGCGESASL 343
             E   +Y+FG G+   L
Sbjct: 336 PGEGPRLYAFGSGDQGQL 353


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 29/352 (8%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G ++ +G N  GQLG     +   P P  +L  +R +Q   G  +T+       VYA G 
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGE-QTLF-----AVYATGY 361

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
            +      G+ GT+ V+SP L+ES++++ + + A+  G      LS EG V+++    D 
Sbjct: 362 GA--GGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDG 419

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH    N  +   ++ +L    VV IAAG  +    AC  S   +++ G G  G+LGH
Sbjct: 420 KLGHGNR-NSCDRPRVIESLRGKEVVDIAAGGAHS---ACITSTGELFTWGKGRYGRLGH 475

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G   D+  P+L+E  + + +  V   +G      +  D  V +WG G YG LG G  +  
Sbjct: 476 GDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 535

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            +P+ V+AL     + V  G   +  +++ G VY++G G+   LGH +          +V
Sbjct: 536 KIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGS--------DDHV 587

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             P+ V +L+  N  V+ I+ T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 588 RRPRKVAALQGKN--VISIA-TGSL----HCVACTDQGEVFTWGDNDEGQLG 632



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 20/277 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H +A++S+G V+S+G    G+LGHG      RPR I SL+G  ++  AAG   +  
Sbjct: 396 SGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSAC 455

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+  G+++ +GK  +G   +G    ++   P+LVE+LK + V+  A   G+  T  ++ +
Sbjct: 456 ITSTGELFTWGKGRYGRLGHGDSEDQM--KPKLVEALKGVRVIDVACGSGDAQTLCITDD 513

Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
             V+++  G+  +LG         P  VE   L+G      VV++  G  + +AL    S
Sbjct: 514 DSVWSWGDGDYGKLGRGGSDGCKIPQKVE--ALIGQ----GVVKVECGSQFSVALT--KS 565

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           G  VY+ G G   +LGHGS    + PR +   Q  N+  + +A G+ H       G V T
Sbjct: 566 G-CVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNV--ISIATGSLHCVACTDQGEVFT 622

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           WG    G LG G+      P++V AL   K   VA G
Sbjct: 623 WGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACG 659



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
           LSR    +T SWG   ++      H  +   VE      P P    L  +  VQ+  G  
Sbjct: 293 LSRRPDDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVKLPTPC-DALAALRPVQLIGGEQ 351

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            L A         VY+ G G GG+LG G       P L+E  Q ++++ V V +G  H  
Sbjct: 352 TLFA---------VYATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCL 402

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            +  +G V +WG    G LGHGN      P+V+++L   + + +A G   +  ++  G++
Sbjct: 403 ALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGEL 462

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           +++G G    LGH    D         + P+LV +LK V  RV+ ++  +    +A T  
Sbjct: 463 FTWGKGRYGRLGHGDSEDQ--------MKPKLVEALKGV--RVIDVACGSG---DAQTLC 509

Query: 393 LTESGKLYAFGAGDKGQLG 411
           +T+   ++++G GD G+LG
Sbjct: 510 ITDDDSVWSWGDGDYGKLG 528



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +N  +IA G  H +A T +G V+++G N  GQLG G+T    RPR + +LQG +I + A 
Sbjct: 599 KNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVAC 658

Query: 103 GAGRTMLISDAGQVYA 118
           G+  ++  S +  V A
Sbjct: 659 GSAHSLAWSTSKPVNA 674


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPKLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SP+L++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKK-QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ ++SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 169/358 (47%), Gaps = 35/358 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           +S+A+ + G V++ GSNS+GQLG+GTT     PRP+  L   R +  AAG    + +   
Sbjct: 134 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVAAGGSHALALCAD 191

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G + +G  + G   T    +P  V  L+ +  V  A G   +  L  +G V+ +
Sbjct: 192 GTVWAWGNNGYG--QLGNGSTAHRATPVQVPGLQGVVAV--AGGYMHSLALCADGTVWAW 247

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            + +  +LG+ T  +   P P+ G  +   VV +AAG  + LAL    +   V++ G   
Sbjct: 248 GFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVAAGGFHSLALCADGT---VWAWGNNG 301

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG    T    P  +E  +    + V VA G +H+  V   G + +WG    G LG+
Sbjct: 302 FGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGN 357

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+    + P  VQ L  V +  VA G   +  V  DG V+++G  E   LGH        
Sbjct: 358 GSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQADGTVWAWGRNEEGQLGH-------- 407

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            R     TP  V  L+       ++++    Y   H+ ++   G L+A+G  D GQLG
Sbjct: 408 ERAPERATPVRVPGLQG------EVAVAAGFY---HSLSVQAGGSLWAWGLNDFGQLG 456



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 22/252 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A+ + G V+++G N  GQLG+GTT     P P+  L   +++  AAG   ++ +   
Sbjct: 234 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCAD 291

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G + FG+    V   +  T P  VE L+ +  V    G F+ ++  R G    +
Sbjct: 292 GTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV---AGGFYHSLAVRAGGSL-W 345

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWGN+   +LG+ +  +   P P+ G      V  +AAG  +  ++A Q  G  V++ G 
Sbjct: 346 SWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH--SVAVQADGT-VWAWGR 399

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LGH     E+ P      ++  LQ  V VAAG +H+  V   G +  WG   +G 
Sbjct: 400 NEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 454

Query: 291 LGHGNEECESVP 302
           LG        VP
Sbjct: 455 LGDSEAPLMPVP 466



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 42/337 (12%)

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
           +G+R +  A G   ++ +   G V+A G +S G+   G   T   ++P+ V  L     V
Sbjct: 123 RGVRAV--AGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPRPVPGLSRAVAV 178

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
             A G      L  +G V+  +WGN+   +LG+ +  +   P  + G L+   VV +A G
Sbjct: 179 --AAGGSHALALCADGTVW--AWGNNGYGQLGNGSTAHRATPVQVPG-LQG--VVAVAGG 231

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           Y + LAL    +   V++ G    G+LG+G+      P  +        Q V VAAG +H
Sbjct: 232 YMHSLALCADGT---VWAWGFNDYGQLGNGTTVHSPTPVPVPGLS----QVVSVAAGGFH 284

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  +  DG V  WG   +G LG       + P  V+ L +V  + VA G Y +  V   G
Sbjct: 285 SLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV--VAVAGGFYHSLAVRAGG 342

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++S+G   S  LG+ + +     R A V     VTS+                    H+
Sbjct: 343 SLWSWGNNYSGQLGNGSFSSSA--RPAPVQGLGAVTSVAAGGM---------------HS 385

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            A+   G ++A+G  ++GQLG E      ER  P RV
Sbjct: 386 VAVQADGTVWAWGRNEEGQLGHE---RAPERATPVRV 419



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 29/225 (12%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A GY Y LAL    +   V++ G    G+LG+G+      PR +        + V 
Sbjct: 125 VRAVAGGYQYSLALHADGT---VWACGSNSAGQLGNGTTAARSAPRPVPGLS----RAVA 177

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           VAAG  HA  +  DG V  WG   YG LG+G+    + P  V  L  V  + VA G   +
Sbjct: 178 VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHS 235

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +  DG V+++G  +   LG+            +  TP  V  L QV      +S+   
Sbjct: 236 LALCADGTVWAWGFNDYGQLGNGTTV--------HSPTPVPVPGLSQV------VSVAAG 281

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +   H+ AL   G ++A+G    GQLG E V+  T+R  P RV+
Sbjct: 282 GF---HSLALCADGTVWAWGNNGFGQLG-EAVS--TQRTKPGRVE 320



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV + G ++S+G+N SGQLG+G+     RP P++ L  +  +  AAG   ++ +   
Sbjct: 334 HSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSV--AAGGMHSVAVQAD 391

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G++   E + G +      +P  V  L+    V A     F   LS +     +
Sbjct: 392 GTVWAWGRNE--EGQLGHERAPERATPVRVPGLQGEVAVAAG----FYHSLSVQAGGSLW 445

Query: 174 SWG-ND-ARLGHHTEPNDVEPHP 194
           +WG ND  +LG    P    P P
Sbjct: 446 AWGLNDFGQLGDSEAPLMPVPAP 468


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPKLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SP+L++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKK-QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ ++SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS  + + G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDS--DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +QIAAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + +AAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
             GR+Y+F  G + +LG  +  N   P  + G 
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344


>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1190

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 30/342 (8%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 102
            Q  AG  HS+AV S G  Y++G N  G+LG GT+ ++  P    +P  +      +Q +A
Sbjct: 739  QVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSA 798

Query: 103  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNF 159
            G   ++ +   G  YA+G ++ G+   G   T   TS ++ +   +  +   VQ + G F
Sbjct: 799  GYHHSLALGSDGNAYAWGYNNSGQLGDGTS-TDRATSVRVKKPAGTSTDFTYVQVSAGAF 857

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLA 216
             +  L  +G  Y +   N  +LG  T  +   P  +    GT  +    QI AGY + LA
Sbjct: 858  HSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLA 917

Query: 217  LACQPSGMAVYSVGCGLGGKLGHGSR----TDEKHPRLIEQFQLLN-----LQPVVVAAG 267
            +     G A Y+ G    G+LG+ S+    +   +P  +      N     L+ V V AG
Sbjct: 918  VGSD--GYA-YAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAG 974

Query: 268  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV-------QALNDVKAIHVATGD 320
             WH+  +G DG    WG+   G LG+ + +  +VP +V            +KA+ V+TG 
Sbjct: 975  FWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQ 1034

Query: 321  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            Y +  +  DG+ Y++G      LG+N+I  G  N  A    P
Sbjct: 1035 YHSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVP 1076



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 173/412 (41%), Gaps = 49/412 (11%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-----------IIQAA 101
            G S+AV S G  Y++G N  G+LG GTT E  R  P+   Q  R            +Q +
Sbjct: 682  GFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVS 741

Query: 102  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAAIGNF 159
            AG+  ++ +   G  YA+G++  G    G    +   V   +   +  +   VQ + G  
Sbjct: 742  AGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYH 801

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYCYLLA 216
             +  L  +G  Y + + N  +LG  T  +    V      GT  +   VQ++AG  + LA
Sbjct: 802  HSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLA 861

Query: 217  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--EQFQLLNLQPVVVAAGAWHAAVV 274
            L    S    Y+ G    G+LG G+ TD   P  +        +     + AG  H+  V
Sbjct: 862  LG---SDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAV 918

Query: 275  GQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALND---------VKAIHVATGDYTT 323
            G DG    WG+   G LG+ ++       P  V+  N          +KA++V  G + +
Sbjct: 919  GSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHS 978

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---SLKQVNERVVQISL 380
              +  DG+ Y++G   +  LG+N+  D           P LV+   S    ++ +  + +
Sbjct: 979  LALGSDGNAYAWGFNSNGQLGNNSSKDS--------TVPVLVSDSASPTDTSKGLKAVLV 1030

Query: 381  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG---IELVNNQTERGNPERVDI 429
            +   Y   H+ AL   G  YA+G    GQLG   I   +N  E  +P  V +
Sbjct: 1031 STGQY---HSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPV 1079



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 45/230 (19%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP----IRSL-------QG 94
            +Q  AG  HS+AV S G  Y++G N SGQLG+ +    + P P    +R+        +G
Sbjct: 906  AQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKG 965

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLK 147
            ++ +   AG   ++ +   G  YA+G +S G  + G   +K  T P LV       ++ K
Sbjct: 966  LKAVNVTAGFWHSLALGSDGNAYAWGFNSNG--QLGNNSSKDSTVPVLVSDSASPTDTSK 1023

Query: 148  NIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP---NDVE-----PHPLLG 197
             +  V  + G + +  L  +G  Y  +WG++   +LG+++ P   N+ E     P P++ 
Sbjct: 1024 GLKAVLVSTGQYHSLALGSDGNAY--AWGDNGYGQLGNNSIPTGSNNNEARSPVPVPVVF 1081

Query: 198  TLENI---------PVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGG 235
             L  +         P   + +   G   +L  A QP GM   SV   LGG
Sbjct: 1082 NLPPVITGVRFDTSPGTNLKSGDGGSVNVLTPAHQP-GMVTVSVDYTLGG 1130


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVTVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G    G+   G+ GT+  T  P+ ++SL +I +VQ A G F +  LS+   
Sbjct: 100 NDKGQVYAWGFAVDGQL--GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   E        ++ +L  IP  QIAAG  +   L    SG AV+
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL--SG-AVF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V ++ G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 30/357 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY + +  D +LG  
Sbjct: 64  GQLGH----EKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS 119

Query: 185 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
            TE     P  +  +L +I +VQ+A GY + LAL+    G  V+S G    G+LG G   
Sbjct: 120 GTEEYTRVPRNI-KSLSDIQIVQVACGYFHSLALS---KGSEVFSWGQNKYGQLGLGYEY 175

Query: 244 DEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P++I+   LL +    +AAG  H+ V+   G V  WG  ++G LG  +E    VP
Sbjct: 176 KKQASPQIIKS--LLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVP 233

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            ++++L   K ++++ G+  T  ++++G V++FG G    LGHN+ A     R    L  
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMG 293

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 418
            +VT          QI+         HT A   S G++Y+FG G  GQLG+   +N+
Sbjct: 294 NIVT----------QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGTTSNR 335



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 137/260 (52%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G    GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++ +G+   G +  K   SPQ+++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG +   +LG + E +   P+ LL +L +  +V I+ G  +  AL  +     V+
Sbjct: 211 V--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYISCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S   E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G       P  V+
Sbjct: 323 GNGQLGMGTTSNRKSPFPVK 342



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P+ I+SL GI   Q AAG  
Sbjct: 141 QVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G V+ +G++ FG+     +  + V  P L++SL++  +V  + G   TA L+
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + NI V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGTTSNRKSP 338



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 3/154 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G V+ +G N  GQLG     + + P  ++SL+  +I+  + G  
Sbjct: 193 AQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
              GR+Y+F  G + +LG  T  N   P P+ G 
Sbjct: 311 PSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKGN 344


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 177/360 (49%), Gaps = 23/360 (6%)

Query: 36  AGEACCR--RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 93
           A EAC     E  QA +G  HS+ + S G V+S G NS GQLG    + E +P+PI++L+
Sbjct: 25  APEACGPGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALE 84

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            +R+   + G   ++ +   G+V+A+G  S G+   G +  ++   PQ +++L  I ++Q
Sbjct: 85  TLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIG-EFKEINLIPQKIKTLTGIKIIQ 143

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAG 210
            + GN+ +  LS +G+V  FSWG+++  +LG   E P+   P   + +L+ IP+ Q+AAG
Sbjct: 144 VSCGNYHSLALSEDGQV--FSWGSNSHGQLGLGKELPSQASPQR-VRSLDGIPLAQVAAG 200

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             +  AL+   +     S   G     G         PR +   + L +  V ++ G  H
Sbjct: 201 GAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGV--VYISCGHEH 258

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSED 329
            AV+ Q+G+V T+G    G LGH     ++ P++++ +  + +  +  G Y T   V   
Sbjct: 259 TAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVS-QIDCGSYHTLAYVYTT 317

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G V SFG G S     N         H  +LT     +     ER+V + + + I+   H
Sbjct: 318 GQVVSFGRGPSCKSCSN---------HPELLTENTDVTCLISAERLVDVQVKH-IFAGTH 367



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 17/204 (8%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           AV+S G    G+LG      E+ P+ I+  + L ++  +V+ G  H+  V   GRV  WG
Sbjct: 54  AVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVE--LVSCGKEHSLAVCYKGRVFAWG 111

Query: 285 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  G LG G  +E   +P+ ++ L  +K I V+ G+Y +  +SEDG V+S+G      L
Sbjct: 112 AGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQL 171

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G        G    +  +PQ V SL         I L       AH+FAL+ SG  + +G
Sbjct: 172 G-------LGKELPSQASPQRVRSLDG-------IPLAQVAAGGAHSFALSLSGTSFGWG 217

Query: 404 AGDKGQLGIELVNNQTERGNPERV 427
           + + GQL     N   +   P  V
Sbjct: 218 SNNAGQLAFFGSNVPVQSYKPRSV 241



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 22/262 (8%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           QAA G   + +L  +G V++    +  +LG      + +P P+   LE + V  ++ G  
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPI-QALETLRVELVSCGKE 96

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWH 270
           + LA+  +     V++ G G  G+LG G   + K   LI Q    L  ++ + V+ G +H
Sbjct: 97  HSLAVCYKGR---VFAWGAGSEGQLGIG---EFKEINLIPQKIKTLTGIKIIQVSCGNYH 150

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           +  + +DG+V +WG   +G LG G E   ++ P+ V++L+ +    VA G   +F +S  
Sbjct: 151 SLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLS 210

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G  + +G   +  L          N       P+ V++LK +   VV IS  +      H
Sbjct: 211 GTSFGWGSNNAGQLAFFG-----SNVPVQSYKPRSVSALKTLG--VVYISCGHE-----H 258

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T  LT++GK++ FG    GQLG
Sbjct: 259 TAVLTQNGKVFTFGDNSCGQLG 280



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
           A+G  H+ ++  DG V + G    G LG    + E  PK +QAL  ++   V+ G   + 
Sbjct: 40  ASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSL 99

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            V   G V+++G G    LG     +         L PQ + +L  +  +++Q+S  N  
Sbjct: 100 AVCYKGRVFAWGAGSEGQLGIGEFKEIN-------LIPQKIKTLTGI--KIIQVSCGN-- 148

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
               H+ AL+E G+++++G+   GQLG  L      + +P+RV
Sbjct: 149 ---YHSLALSEDGQVFSWGSNSHGQLG--LGKELPSQASPQRV 186


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 173/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4147 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4206

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +
Sbjct: 4207 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4264

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    S   V + G G  G+LGHG
Sbjct: 4265 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAIT---SSGHVLTWGKGRYGRLGHG 4320

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4321 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4378

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4379 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4430

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A +++G++Y +G  D+GQLG
Sbjct: 4431 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAGEVYTWGDNDEGQLG 4476



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            I+G   S+ + S+ G V++ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 3065 ISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3124

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   A G+  +A +S
Sbjct: 3125 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 3182

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  +   L    V+Q+A G      LA    G A
Sbjct: 3183 SQGELYTWGLGEYGRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDG-A 3240

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  + +  GA  +  + + G V TWG 
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3298

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 3299 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3355

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
                 G GN   N   P LV  L  V    V    ++SI W     +L E  +
Sbjct: 3356 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNASLDEEKR 3403



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 167/353 (47%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P   +++  +R I  + G+    ++S  G+V+A G+ 
Sbjct: 3028 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEG 3087

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 3088 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3145

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH       +P  L+  L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 3146 LGHGNRTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3201

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
                +  P+ +    L   + + VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 3202 DNATQLKPKQVTA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3259

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             + P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 3260 SATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3311

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  PQ +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3312 VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3357



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4192 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4251

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 4252 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTW 4309

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4310 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4367

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  + V  G+  +  + + G V TWG G +  LGH
Sbjct: 4368 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4425

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4426 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ- 4484

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4485 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4513



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 26/286 (9%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           Y  +  K    PQ +E L    ++  A    G  F A+ S     Y++  G D RLGH  
Sbjct: 593 YNCRLGKPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRN-AYSWGAGEDHRLGHGD 651

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
                 P  +      +  V     Y    + A   SG  +Y+ G G  G+LGHG+  D+
Sbjct: 652 THARAVPTKISALDRCVKAVFCGCSY----SAAITWSG-NLYTWGRGTYGRLGHGNSDDQ 706

Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
             P ++       +  V + +G  H+  +  +G V  WG G YG LG+GN      P +V
Sbjct: 707 CVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILV 766

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQL 364
           + L  V+ I    G  ++  ++ +G +YS+  G+++ LGH  +    QG        P+L
Sbjct: 767 ETLPRVQRIFA--GAQSSMALTTEGHLYSW--GKASCLGHQQVERSVQGCS-----VPRL 817

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           V+SL+  ++R+V +++       AH  ALT  G+++ +G  D  Q+
Sbjct: 818 VSSLQ--HKRLVDVAVG-----VAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 13/173 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G +Y++G  + G+LGHG ++++  P  + +L    II  A G+G   ++
Sbjct: 674 GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSL 733

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G VYA+G   +G+   G   + L   P LVE+L  +  + A  G   +  L+ EG
Sbjct: 734 CLTSEGLVYAWGDGDYGKLGNGNCNSSL--QPILVETLPRVQRIFA--GAQSSMALTTEG 789

Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 217
            +Y  SWG  + LGH      V+    P  L+ +L++  +V +A G  + LAL
Sbjct: 790 HLY--SWGKASCLGHQQVERSVQGCSVPR-LVSSLQHKRLVDVAVGVAHCLAL 839



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 17/275 (6%)

Query: 81  EEEWRPRPIRSLQGIRIIQAAAGA-GRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVT 138
           + E  P+PI  L    I+  A    GR  L  D+ +  Y++G        +G    + V 
Sbjct: 599 KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAV- 657

Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
            P  + +L    V     G  ++A ++  G +YT+  G   RLGH    +   P  ++  
Sbjct: 658 -PTKISALDRC-VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP-AIVMA 714

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           L    ++ +A G     +L     G+ VY+ G G  GKLG+G+      P L+E    + 
Sbjct: 715 LAEYEIIDVALGSGDAHSLCLTSEGL-VYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQ 773

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAI 314
                + AGA  +  +  +G +  + WG+  CLGH   E      SVP++V +L   + +
Sbjct: 774 ----RIFAGAQSSMALTTEGHL--YSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLV 827

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            VA G      ++  G+V+ +G  +S  +  ++++
Sbjct: 828 DVAVGVAHCLALTSCGEVFGWGRNDSQQICPSSVS 862



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3276 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3335

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3336 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3385



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+ +TS+G+VY++G    G+LG+G      +P  + +L   R+ +  AGA  +M 
Sbjct: 727 SGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLP--RVQRIFAGAQSSMA 784

Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  G +Y++GK S     + E  VQG  +   P+LV SL++  +V  A+G      L+ 
Sbjct: 785 LTTEGHLYSWGKASCLGHQQVERSVQGCSV---PRLVSSLQHKRLVDVAVGVAHCLALTS 841

Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLL 196
            G V  F WG ND++      P+ V   PLL
Sbjct: 842 CGEV--FGWGRNDSQ---QICPSSVSCEPLL 867



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 17/238 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 112
           H +A+ S    YS+G+    +LGHG T     P  I +L   R ++A   G   +  I+ 
Sbjct: 626 HFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALD--RCVKAVFCGCSYSAAITW 683

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
           +G +Y +G+ ++G   +G    + V  P +V +L    ++  A+  G+  +  L+ EG V
Sbjct: 684 SGNLYTWGRGTYGRLGHGNSDDQCV--PAIVMALAEYEIIDVALGSGDAHSLCLTSEGLV 741

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 229
           Y +  G+  +LG+    + ++P      +E +P VQ I AG    +AL  +    +    
Sbjct: 742 YAWGDGDYGKLGNGNCNSSLQPI----LVETLPRVQRIFAGAQSSMALTTEGHLYSWGKA 797

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            C LG +    S      PRL+   Q   L  V VA G  H   +   G V  +GWGR
Sbjct: 798 SC-LGHQQVERSVQGCSVPRLVSSLQHKRL--VDVAVGVAHCLALTSCGEV--FGWGR 850



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 39/255 (15%)

Query: 169 RVYTFSWGNDAR--LGHHTEPNDVEP-----HPLLGTLENIPVV----QIAAGYCYLLAL 217
           RVY   W + ++   G   EP+ V P      PLL  + ++P++    Q+    C    L
Sbjct: 526 RVYALGWPSLSKEQPGFSAEPSTVTPSWSSQDPLL--VGSLPLLNCRFQVKQIACSESLL 583

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                   +Y+  C LG          E  P+ IE+     +  +       H   +  +
Sbjct: 584 LLLSQDGKLYN--CRLG--------KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSN 633

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 336
               +WG G    LGHG+    +VP  + AL+  VKA+    G   +  ++  G++Y++G
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDRCVKAVFC--GCSYSAAITWSGNLYTWG 691

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
            G    LGH       GN     + P +V +L +    ++ ++L +    +AH+  LT  
Sbjct: 692 RGTYGRLGH-------GNSDDQCV-PAIVMALAEYE--IIDVALGSG---DAHSLCLTSE 738

Query: 397 GKLYAFGAGDKGQLG 411
           G +YA+G GD G+LG
Sbjct: 739 GLVYAWGDGDYGKLG 753



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH++ G  + F+VS+DG V++ G G 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3089 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3135

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3136 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3161


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 169/358 (47%), Gaps = 35/358 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           +S+A+ + G V++ GSNS+GQLG+GTT     PRP+  L   R +  AAG    + +   
Sbjct: 131 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVAAGGSHALALCAD 188

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G + +G  + G   T    +P  V  L+ +  V  A G   +  L  +G V+ +
Sbjct: 189 GTVWAWGNNGYG--QLGNGSTAHRATPVQVPGLQGVVAV--AGGYMHSLALCADGTVWAW 244

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            + +  +LG+ T  +   P P+ G  +   VV +AAG  + LAL    +   V++ G   
Sbjct: 245 GFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVAAGGFHSLALCADGT---VWAWGNNG 298

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG    T    P  +E  + +    V VA G +H+  V   G + +WG    G LG+
Sbjct: 299 FGQLGEAVSTQRTKPGRVEGLREV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGN 354

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+    + P  VQ L  V +  VA G   +  V  DG V+++G  E   LGH        
Sbjct: 355 GSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQADGTVWAWGRNEEGQLGH-------- 404

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            R     TP  V  L+       ++++    Y   H+ ++   G L+A+G  D GQLG
Sbjct: 405 ERAPERATPVRVPGLQG------EVAVAAGFY---HSLSVQAGGSLWAWGLNDFGQLG 453



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 22/252 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A+ + G V+++G N  GQLG+GTT     P P+  L   +++  AAG   ++ +   
Sbjct: 231 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCAD 288

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G + FG+    V   +  T P  VE L+ +  V    G F+ ++  R G    +
Sbjct: 289 GTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV---AGGFYHSLAVRAGGSL-W 342

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWGN+   +LG+ +  +   P P+ G      V  +AAG  +  ++A Q  G  V++ G 
Sbjct: 343 SWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH--SVAVQADGT-VWAWGR 396

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LGH     E+ P      ++  LQ  V VAAG +H+  V   G +  WG   +G 
Sbjct: 397 NEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 451

Query: 291 LGHGNEECESVP 302
           LG        VP
Sbjct: 452 LGDSEAPLMPVP 463



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 42/337 (12%)

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
           +G+R +  A G   ++ +   G V+A G +S G+   G   T   ++P+ V  L     V
Sbjct: 120 RGVRAV--AGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPRPVPGLSRAVAV 175

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
             A G      L  +G V+  +WGN+   +LG+ +  +   P  + G L+   VV +A G
Sbjct: 176 --AAGGSHALALCADGTVW--AWGNNGYGQLGNGSTAHRATPVQVPG-LQG--VVAVAGG 228

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           Y + LAL    +   V++ G    G+LG+G+      P  +        Q V VAAG +H
Sbjct: 229 YMHSLALCADGT---VWAWGFNDYGQLGNGTTVHSPTPVPVPGLS----QVVSVAAGGFH 281

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  +  DG V  WG   +G LG       + P  V+ L +V  + VA G Y +  V   G
Sbjct: 282 SLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV--VAVAGGFYHSLAVRAGG 339

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++S+G   S  LG+ + +     R A V     VTS+                    H+
Sbjct: 340 SLWSWGNNYSGQLGNGSFSSSA--RPAPVQGLGAVTSVAAGGM---------------HS 382

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            A+   G ++A+G  ++GQLG E      ER  P RV
Sbjct: 383 VAVQADGTVWAWGRNEEGQLGHE---RAPERATPVRV 416



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 29/225 (12%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A GY Y LAL    +   V++ G    G+LG+G+      PR +        + V 
Sbjct: 122 VRAVAGGYQYSLALHADGT---VWACGSNSAGQLGNGTTAARSAPRPVPGLS----RAVA 174

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           VAAG  HA  +  DG V  WG   YG LG+G+    + P  V  L  V  + VA G   +
Sbjct: 175 VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHS 232

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +  DG V+++G  +   LG+            +  TP  V  L QV      +S+   
Sbjct: 233 LALCADGTVWAWGFNDYGQLGNGTTV--------HSPTPVPVPGLSQV------VSVAAG 278

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +   H+ AL   G ++A+G    GQLG E V+  T+R  P RV+
Sbjct: 279 GF---HSLALCADGTVWAWGNNGFGQLG-EAVS--TQRTKPGRVE 317



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV + G ++S+G+N SGQLG+G+     RP P++ L  +  +  AAG   ++ +   
Sbjct: 331 HSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSV--AAGGMHSVAVQAD 388

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G++   E + G +      +P  V  L+    V A     F   LS +     +
Sbjct: 389 GTVWAWGRNE--EGQLGHERAPERATPVRVPGLQGEVAVAAG----FYHSLSVQAGGSLW 442

Query: 174 SWG-ND-ARLGHHTEPNDVEPHP 194
           +WG ND  +LG    P    P P
Sbjct: 443 AWGLNDFGQLGDSEAPLMPVPAP 465


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 21/301 (6%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+ A+T+ G +Y++G  ++++G LGHG+    W P+ +   L+G+++   
Sbjct: 314 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 373

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   T LI+ +G++Y FG  +FG   +G + T  ++ P+ VESLK +  +  + G + 
Sbjct: 374 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 431

Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           TA +         +  G+++T+  G+  RLGH    + ++P   + +L +    +   G+
Sbjct: 432 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 490

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
              + L    SG  +++ G  + G+LG+ +  D ++PRL+E+ +L     V VA GA+H 
Sbjct: 491 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVACGAYHV 545

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
           AV+ Q G V TWG G  G LGHG+      P  V+AL D     +A G   T  + +   
Sbjct: 546 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKS 605

Query: 332 V 332
           V
Sbjct: 606 V 606



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 153/339 (45%), Gaps = 37/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +   A G     L++   +V+ +G++  G   +G  GT +   P+LVES
Sbjct: 252 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 309

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH +  +   P  + G LE 
Sbjct: 310 LSICNVETIACGEFHTCAITATGDLYT--WGDGTHNAGLLGHGSNVSHWIPKRVSGPLEG 367

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   Q++A  C     A   S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ 
Sbjct: 368 L---QVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVES--LKGLRT 422

Query: 262 VVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           + V+ G WH A V +          G++ TWG G    LGHG+   +  P  V +L D  
Sbjct: 423 ISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYN 482

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
                 G   T  ++  G +++ G      LG N   DG+         P+LV   K   
Sbjct: 483 FHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNNDGR--------YPRLVEE-KLGG 532

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             VV+++     Y   H   LT+SG++Y +G G  G+LG
Sbjct: 533 GGVVEVAC--GAY---HVAVLTQSGEVYTWGKGANGRLG 566



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 141/332 (42%), Gaps = 20/332 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+  VT +  V+++G   SG+LGHG     ++PR + SL    +   A G  
Sbjct: 264 SYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEF 323

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
            T  I+  G +Y +G  +      G         P+ V   L+ + V   + G + TA++
Sbjct: 324 HTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALI 383

Query: 165 SREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           +  G++YTF  G    LGH        P +VE    L T+     V   A    ++    
Sbjct: 384 TSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQS 443

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QD 277
             S   +++ G G   +LGHG R+ +  P  +      N    V      H   +G    
Sbjct: 444 NTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCG----HTLTIGLTTS 499

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G + T G   YG LG+ N +      V + L     + VA G Y   V+++ G+VY++G 
Sbjct: 500 GHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGK 559

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           G +  LGH  IAD +        TP  V +L+
Sbjct: 560 GANGRLGHGDIADRK--------TPTFVEALR 583



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 31/294 (10%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           Y       +  P+ +ES   + V   A G    A+++R+  V  F+WG +   RLGH   
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 298

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            +  +P  L+ +L    V  IA G  +  A+      +  +  G    G LGHGS     
Sbjct: 299 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 356

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  LQ   V+ G WH A++   G++ T+G G +G LGHGN E  S PK V+
Sbjct: 357 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 415

Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 357
           +L  ++ I V+ G + T  V E          G ++++G G+   LGH       G+R +
Sbjct: 416 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH-------GDR-S 467

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + L P  V SL       +  +   ++  +  T  LT SG ++  G+   GQLG
Sbjct: 468 SKLKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG 514


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G   +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GYC+ LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 176/373 (47%), Gaps = 36/373 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           +Y +G N  GQLG G+       P PI + Q +  I  A+G   T+ ++   +VY+ G +
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDANQSV--ISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            FG+   G Q ++    P LV       +   A G+FF+  ++  G +  F WG      
Sbjct: 59  EFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLL--FGWGRSLNGE 112

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
              + + +    LL  + +  VVQ+A G  + +AL  + +   + S G    G+LG GS 
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT---ILSWGSNTQGQLGLGSS 169

Query: 243 TDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 299
             E   P +I     LN  P+  + AGA+H+ V+   G + TWG   +G LGHGN +  +
Sbjct: 170 EIEFLEPTIIAS---LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQ 226

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           S P++V+ L   + + VA G+  +   + +G V+S+G G +  LGHN++        ANV
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSM--------ANV 278

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
             P+ +  L  +   V QI          HT +LT+  KL  FG     QLG    +N T
Sbjct: 279 TQPKKIMEL--MGTTVCQICCGRR-----HTISLTDKRKLLGFGLNSNNQLG---THNDT 328

Query: 420 ERGNPERVDIDLS 432
               P  + I L+
Sbjct: 329 SARLPITIPISLT 341



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 20/303 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H++ +TS   VYS GSN  GQLG    + + RP  +       I   AAG   ++ 
Sbjct: 38  SGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIA 95

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+++G ++ +G+   GE    +     +  P+L++ + +  VVQ A G      L+ EG 
Sbjct: 96  IAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +   SWG++ +    LG  +E   +EP  ++ +L   P+ QI AG  +   L+  PSG  
Sbjct: 153 I--LSWGSNTQGQLGLG-SSEIEFLEP-TIIASLNAFPISQICAGAYHSGVLS--PSG-T 205

Query: 226 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           +++ G    G+LGHG S + +  PRL++   L + + V VA G  H+    ++G V +WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSSPRLVK--TLRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G LGH +    + PK +  L       +  G   T  +++   +  FG   +  LG
Sbjct: 264 HGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323

Query: 345 -HN 346
            HN
Sbjct: 324 THN 326



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 6/236 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H IA+T +G + S+GSN+ GQLG G++E E+  P  I SL    I Q  AGA 
Sbjct: 136 QVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAY 195

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + ++S +G ++ +GK+++G+  +G       +SP+LV++L++  VV  A+G   +   +
Sbjct: 196 HSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           R G V+++  G + +LGH++  N  +P  ++  L    V QI  G  + ++L        
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLT---DKRK 310

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +   G     +LG  + T  + P  I      + Q   +AAG   +    Q+   C
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQSFSGSQNESSC 366



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
           SQ  AG  HS  ++  G ++++G N+ GQLGHG ++  +  PR +++L+   ++  A G 
Sbjct: 188 SQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGE 247

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             ++  +  G V+++G    G  + G      VT P+ +  L    V Q   G   T  L
Sbjct: 248 EHSVCRTRNGGVFSWGHG--GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISL 305

Query: 165 SREGRVYTFSWGNDARLGHHTE 186
           + + ++  F   ++ +LG H +
Sbjct: 306 TDKRKLLGFGLNSNNQLGTHND 327


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4050 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +
Sbjct: 4110 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4167

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4168 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4223

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4224 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4281

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  + V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4282 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4333

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4334 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 4379



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 31/380 (8%)

Query: 36   AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
            AG       + +A A P   +  T    V  +G N   QLG     +   P   +++  +
Sbjct: 2964 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 3019

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            R I  A G+    ++S  G+VYA G+ + G    GV  T  V  P  +  L+   V + A
Sbjct: 3020 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLRQYVVKKVA 3077

Query: 156  I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            +  G      L+ +G+V+++  G D +LGH       +P  L+  L    +  +A G  +
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 3136

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
              A++ Q     +Y+ G G  G+LGHG  T +  P+L+    L   + V VA G+  A  
Sbjct: 3137 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 3191

Query: 274  VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
            +   +DG V +WG G +G LG G  E    P  ++ L+ +  + +  G   +  ++  G+
Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 3251

Query: 332  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
            V+++G G+   LGH       G++H  V  PQ +  L+    RV+ +++        H  
Sbjct: 3252 VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 3296

Query: 392  ALTESGKLYAFGAGDKGQLG 411
            A+T++G++YA+G  D GQ G
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQG 3316



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4095 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4154

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 4155 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4212

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4270

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  V V  G+  +  + + G V TWG G +  LGH
Sbjct: 4271 YGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4328

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4329 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 4387

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4388 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4416



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 155/342 (45%), Gaps = 22/342 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +PR + +L+  +I   A G+  +  
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3139

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            IS  G++Y +G   +G   +G   T+L   P+LV +L    VVQ A G  +  T  L+ +
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 3197

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G V+++  G+  +LG         PH  +  L  I VVQI  G  + LAL        V+
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3253

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG     + P+ I   +    + + VA GA H   V   G+V  WG   
Sbjct: 3254 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-----VSEDGDVYSFGCGESAS 342
            +G  G GN      P +V  L+ V    VA G   +        S D +       +   
Sbjct: 3312 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEE-------KRGP 3364

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +  ++  D  G     +   + + +LKQ  + + Q SL+ S+
Sbjct: 3365 VPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESL 3406



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 37/339 (10%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 153
            +I Q A    + +++S  G++Y + + +  EAE           P  +E +  ++F+  
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 619

Query: 154 A--AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           A    G  F A+ S     Y++  G D RLGH        P  +   LE   V  +  G 
Sbjct: 620 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 677

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            Y  A+ C   G  + + G G   +LGHG+  D   P L+       +  V + +G  H+
Sbjct: 678 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 734

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +  +G V  WG G YG LG+GN      P +V++L  V+   V  G   +  +S +G 
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 792

Query: 332 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           +Y++  G++  LGH  +    QG        P+LV+SL+  ++R+V ++++      AH 
Sbjct: 793 LYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 838

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            AL+ SG+++ +G  D  Q+    V+++     P  V +
Sbjct: 839 LALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSL 877



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3235 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3294

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3344



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 16/169 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+A+TS+G+V+++G    G+LG+G      +P  + SL   R+ +  AG+  ++ 
Sbjct: 729 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 786

Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +S  GQ+Y +GK +  G    E  VQG  +   P+LV SL++  +V  A+       LS 
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 843

Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
            G V  F WG ND++      P  V   PLL T  L ++P    +   C
Sbjct: 844 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 887



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G + ++G  +  +LGHG +++   P  + +L    ++  A G+G   ++
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G V+A+G   +G+   G     L   P LVESL  +  V A  G+ F+  LS EG
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 791

Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
           ++YT  WG    LGH      V+    P  L+ +L++  +V +A    + LAL+
Sbjct: 792 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 842



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 14/237 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+ S    YS+G+    +LGHG T     P  I +L+   +     G   +  I+  
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G +  +G+ ++    +G    +  + P LV +L +  VV  A+  G+  +  L+ EG V+
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+      ++P      +E++P VQ + AG  + +AL+ +   +  +   
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSVALSSE-GQLYTWGKA 799

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             LG +L   S      PRL+   Q   +  V VA    H   +   G V  +GWGR
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQHKRI--VDVAVSVAHCLALSSSGEV--FGWGR 852



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L+Q   + V +          H  ALT  GK+
Sbjct: 3048 NGRL-------GLGVTH-NVPLPHQLPVLRQYVVKKVAVH-----SGGKHALALTLDGKV 3094

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3095 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3120



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 102
           +  AG   S+A++S+G +Y++G  +   LGH   E   +    PR + SLQ  RI+  A 
Sbjct: 776 RVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 833

Query: 103 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 143
                + +S +G+V+ +G+ DS       V    L+ +P LV
Sbjct: 834 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 875


>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 411

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 178/381 (46%), Gaps = 40/381 (10%)

Query: 40  CCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           CC    +  Q   G  HS+ +   G V+++G N +GQLG GTT        ++ L+   +
Sbjct: 31  CCSLFAAVPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLE--DV 88

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +  AAG    + +   G V+A+G + FG+   G    +   +P  V+++K++  + A  G
Sbjct: 89  VSIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENR--NTPVKVKTIKDVTEIDA--G 144

Query: 158 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            + +  L  +G V+   WGN+   +LG  T+ +  +P  + G L N  VV ++ G  + L
Sbjct: 145 FYHSIALQSDGTVWV--WGNNELDQLGDGTKSDAYKPMQVQG-LNN--VVAVSGGNHHNL 199

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L    +   ++  G    G+LG G+ T+   P  +  F       V +A+G  +   V 
Sbjct: 200 VLKADGT---IWGWGANGYGQLGDGTMTESSIPTPVYDFN----GAVFIASGNNYNVAVK 252

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            DG +  WG   YG LG+G +    +P  +  LN+  ++ +ATG Y   ++ +DG V S 
Sbjct: 253 ADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNN--SVSIATGGYHALILQQDGTVLSM 310

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G   +  LG  A ++ Q        T   V  L  V      +S+    Y   H+ AL +
Sbjct: 311 GYNRTGQLGTGATSNYQ-------YTTLKVHGLSDV------VSIAAGYY---HSLALKK 354

Query: 396 SGKLYAFGAGDKGQLGIELVN 416
            G ++A+G  + GQLG   +N
Sbjct: 355 DGTIWAWGNNEYGQLGDGTLN 375



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 17/265 (6%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           ++ ++  AG  HSIA+ S G V+ +G+N   QLG GT  + ++P  ++ L    ++  + 
Sbjct: 136 KDVTEIDAGFYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN--NVVAVSG 193

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    +++   G ++ +G + +G+   G      + +P + +    +F+   A GN +  
Sbjct: 194 GNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIPTP-VYDFNGAVFI---ASGNNYNV 249

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +  +G ++ +      +LG+ T+ N   P  + G L N   V IA G  +  AL  Q  
Sbjct: 250 AVKADGSIWGWGMNTYGQLGNGTQTNSKIPIRING-LNN--SVSIATGGYH--ALILQQD 304

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
           G  V S+G    G+LG G+ ++ ++  L    ++  L  VV +AAG +H+  + +DG + 
Sbjct: 305 G-TVLSMGYNRTGQLGTGATSNYQYTTL----KVHGLSDVVSIAAGYYHSLALKKDGTIW 359

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ 306
            WG   YG LG G    + +P + Q
Sbjct: 360 AWGNNEYGQLGDGTLNYKKLPILSQ 384


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G+N+ GQLGH    E  +P  I +L    I+  A 
Sbjct: 34  RSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G  + G+  T+  V  P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +LE IP+ Q+ AG  +  AL+  
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVVAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 ARGQLG 328



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  VVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQF 254
           +G L +  +V +A G  + LAL+ Q     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              V  G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  VV  AG  H+  + 
Sbjct: 152 LAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV--AGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q  AG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 126/258 (48%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++S G+   G +      SPQ V SL+ I + Q   G   +  LS  G 
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q +AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G   +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG  T+        LL +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GYC+ LAL+       V+  G    G+LG G+   
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+L++   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R IQ A G      ++  G+++A G  
Sbjct: 4200 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYG 4259

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ +G VY +  G D +
Sbjct: 4260 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4317

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  LL  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4318 LGHGNRMSYDRPK-LLEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4373

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4374 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4431

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4432 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4483

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A +++G++Y +G  D+GQLG
Sbjct: 4484 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAGEVYTWGDNDEGQLG 4529



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 17/353 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ V S+ G VY+ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 3083 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3142

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   A G+  +A +S
Sbjct: 3143 HALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3200

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G      LA    G A
Sbjct: 3201 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALHGRRVIQVACGSRDAQTLALTEDG-A 3258

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  + +  GA  +  + + G V TWG 
Sbjct: 3259 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3316

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3373

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
                 G GN   N   P LV  L  V    V    ++S+ W     +L E  +
Sbjct: 3374 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSMAWGLPNASLDEEKR 3421



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 143/284 (50%), Gaps = 22/284 (7%)

Query: 130  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
            G++G+K V  P   +++  +  +  A G+    V+S++G+VY    G + RLG     N 
Sbjct: 3060 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNV 3118

Query: 190  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
              PH  L  L    V ++A       ALA    G  V+S G G  GKLGHG+R+    PR
Sbjct: 3119 PLPHQ-LPVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRSTLDKPR 3176

Query: 250  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
            L+E  +   ++   +A G+ H+A +   G + TWG G YG LGHG+   +  PK+V AL+
Sbjct: 3177 LVEALRAKKIRD--IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALH 3234

Query: 310  DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
              + I VA G  D  T  ++EDG V+S+G G+   LG    ++G         TP  +  
Sbjct: 3235 GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG-SEGSA-------TPHEIER 3286

Query: 368  LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            L  +   V+QI           + ALT +G+++ +G GD  +LG
Sbjct: 3287 LSGIG--VIQIECGAQF-----SLALTRAGEVWTWGKGDYYRLG 3323



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 167/353 (47%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P   +++  +R I  A G+    ++S  G+VYA G+ 
Sbjct: 3046 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3105

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 3106 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3163

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH       +P  L+  L    +  IA G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 3164 LGHGNRSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3219

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
                +  P+L+        + + VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 3220 DNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3277

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             + P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 3278 SATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3329

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  PQ +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3330 VRKPQPIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3375



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4245 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4304

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+L+E L  + V   A G+  +A ++  G V T+
Sbjct: 4305 GEVYAWGEGEDGKLGHGNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTW 4362

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4363 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4420

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  + V  G+  +  + + G V TWG G +  LGH
Sbjct: 4421 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4478

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4479 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ- 4537

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4538 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4566



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 55/379 (14%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHG---------TTEEEWRPRPIRSLQGIRIIQA 100
           A P  +  +  +  VY+ G  +  +   G         T+    +P P       ++ Q 
Sbjct: 517 ATPNTASTILEQQRVYALGWPALSKEQQGFNVEPALSWTSAATQQPPPALLTCKFQLKQV 576

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIFVVQAA-- 155
           A      +L+   G++Y +               K  T PQL+   E     FV  AA  
Sbjct: 577 ACSEDMVVLLCQEGKLYNWPI------------AKPETEPQLLDFAEIANETFVSIAAHC 624

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC--- 212
            G  F AV S     Y++  G+  RLGH     D     L   +E++ V ++ + YC   
Sbjct: 625 EGRHFLAVDSNHN-AYSWGVGDSRRLGH----GDCHARELPTKIESL-VRRVQSVYCGCS 678

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           Y  A+  + +   +Y+ G G  G+LGHG+  D+  P ++   +   +  V + +G  H  
Sbjct: 679 YSAAITLRGN---LYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTL 735

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            + + G V  WG G YG LG+G+      P +++ L  V+   V  G   +  ++ +G +
Sbjct: 736 CLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQ--RVFAGSQFSLALTCEGQL 793

Query: 333 YSFGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           YS+  G+++ LGH  +  + QG        P+L+TSL+  ++R+V +++       AH  
Sbjct: 794 YSW--GKASCLGHQLVERNVQGCS-----VPRLITSLQ--HKRIVHVAVG-----VAHCL 839

Query: 392 ALTESGKLYAFGAGDKGQL 410
           AL+ +G+++ +G  D  Q+
Sbjct: 840 ALSSNGEIFGWGRNDNQQI 858



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 14/187 (7%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           E+  RR  S    G  +S A+T +G +Y++G  + G+LGHG ++++  P  + +L+  ++
Sbjct: 664 ESLVRRVQS-VYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQV 722

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +  A G+G   T+ ++  G VYA+G   +G+   G   + L   P L+E L  +  V A 
Sbjct: 723 LDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSL--QPLLIECLPRVQRVFA- 779

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
            G+ F+  L+ EG++Y  SWG  + LGH     +V+    P  L+ +L++  +V +A G 
Sbjct: 780 -GSQFSLALTCEGQLY--SWGKASCLGHQLVERNVQGCSVPR-LITSLQHKRIVHVAVGV 835

Query: 212 CYLLALA 218
            + LAL+
Sbjct: 836 AHCLALS 842



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3294 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3353

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3354 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3403



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 42/284 (14%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPN-------DV 190
           P   + L +  +  AA  N  + +L ++ RVY   W   +  + G + EP          
Sbjct: 502 PHPTQLLPSCLLRPAATPNTASTILEQQ-RVYALGWPALSKEQQGFNVEPALSWTSAATQ 560

Query: 191 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
           +P P L T +   + Q+A     ++ L CQ   +  + +               E  P+L
Sbjct: 561 QPPPALLTCK-FQLKQVACSE-DMVVLLCQEGKLYNWPIA------------KPETEPQL 606

Query: 251 IEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           ++  ++ N   V +AA     H   V  +    +WG G    LGHG+     +P  +++L
Sbjct: 607 LDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL 666

Query: 309 NDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
             V+ +  V  G   +  ++  G++Y++G G    LGH       GN     + P +V +
Sbjct: 667 --VRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGH-------GNSDDQCM-PAMVMA 716

Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           LK  + +V+ ++L +    +AHT  LT  G +YA+G GD G+LG
Sbjct: 717 LK--DHQVLDVALGSG---DAHTLCLTRGGLVYAWGDGDYGKLG 755



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIR 96
           C     +  AG   S+A+T +G +YS+G  S   LGH   E   +    PR I SLQ  R
Sbjct: 770 CLPRVQRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKR 827

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           I+  A G    + +S  G+++ +G++   +    +    + + P L + ++       A 
Sbjct: 828 IVHVAVGVAHCLALSSNGEIFGWGRNDNQQ----ICPASVCSEPLLRQPIQVTLPTMPAS 883

Query: 157 GNFFTAVLS 165
           G   TAV S
Sbjct: 884 GMACTAVQS 892


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T + V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  +    PRLI++ 
Sbjct: 78  IGALADEHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEESVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADEHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS  G+++++  G+D +LG  T    V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTEE    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRAQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 178/365 (48%), Gaps = 39/365 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFG 120
           ++ +G  S GQLG G TE+E+   PR + +L+    + + + G   T  +   G VY  G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            + FG+    +   K  T+P+ V +++   + +   G   T  +S +G V  F+WG+++ 
Sbjct: 61  SNEFGQ----LGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLV--FAWGDNSY 114

Query: 181 ----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
               LG   +        +L  L  + VVQIA G  + +AL    SG  ++  G    G+
Sbjct: 115 GQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTI--SG-HLFCWGDNSSGQ 171

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPV---VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           LG G    + H  + E   +L+L  V   +++AG  H+  +   G +  WG   YG LG 
Sbjct: 172 LGIG----KTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGV 227

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            +     +P ++++L      +V+ G+  T V++ DG V++FGCG S  LGHN+      
Sbjct: 228 HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNS------ 281

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGI 412
           N H    TP+ V  L  +   V QI+        AHT AL   SG++Y FG G  GQLG+
Sbjct: 282 NHHE--YTPRKVFEL--MGSVVTQIACG-----RAHTLALVPSSGRVYTFGRGGDGQLGL 332

Query: 413 ELVNN 417
            + NN
Sbjct: 333 GVTNN 337



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 15/299 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  +   G VY+ GSN  GQLG   +     P  + +++   I +   G   T+ +
Sbjct: 43  GWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHT--NPESVHAIETFTITKVTCGKAHTVAV 100

Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           SD G V+A+G +S+G+   G +   K+ T P++++ L  + VVQ A G   +  L+  G 
Sbjct: 101 SDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGH 160

Query: 170 VYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +  F WG+++  +LG   T  +  EP P+L +L  +P + I+AG  +  AL+   S  A+
Sbjct: 161 L--FCWGDNSSGQLGIGKTHSSMSEPAPVL-SLNGVPFMLISAGGAHSFALS---SSGAL 214

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G+LG    TD   P L++  +   +    V+ G  H AV+  DG V T+G G
Sbjct: 215 FGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGV--CYVSCGEKHTAVLTSDGGVFTFGCG 272

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 344
             G LGH +   E  P+ V  L       +A G  +T  +V   G VY+FG G    LG
Sbjct: 273 TSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLG 331



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 23/259 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---WRPRPIRSLQGIRIIQAAA 102
           ++   G  H++AV+ +G+V+++G NS GQ+G G+  +E     P+ ++ L  + ++Q A 
Sbjct: 88  TKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIAC 147

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +M ++ +G ++ +G +S G+   G   + + + P  V SL  +  +  + G   + 
Sbjct: 148 GCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSM-SEPAPVLSLNGVPFMLISAGGAHSF 206

Query: 163 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA---- 216
            LS  G +  F WG +   +LG H    D    PL   L+++     + G CY+      
Sbjct: 207 ALSSSGAL--FGWGKNEYGQLGVH----DTTDRPLPTLLKSLR----SQGVCYVSCGEKH 256

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVG 275
            A   S   V++ GCG  G+LGH S   E  PR +  F+L+      +A G  H  A+V 
Sbjct: 257 TAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVP 314

Query: 276 QDGRVCTWGWGRYGCLGHG 294
             GRV T+G G  G LG G
Sbjct: 315 SSGRVYTFGRGGDGQLGLG 333



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 109
           G  H+  +TS G V++FG  +SGQLGH +   E+ PR +  L G  + Q A G   T+ L
Sbjct: 253 GEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLAL 312

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 140
           +  +G+VY FG+   G+ + G+  T    SP
Sbjct: 313 VPSSGRVYTFGRG--GDGQLGLGVTNNCNSP 341


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4046 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4105

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +
Sbjct: 4106 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4163

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4164 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4219

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4220 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4277

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  + V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4278 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4329

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4330 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 4375



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 174/371 (46%), Gaps = 31/371 (8%)

Query: 45   NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
            + +A A P   +  T    V  +G N   QLG     +   P   +++  +R I  A G+
Sbjct: 2970 HEEAGAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGS 3025

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTA 162
                ++S  G+VYA G+ + G    GV  T  V  P  +  L    V + A+  G     
Sbjct: 3026 KSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3083

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
             L+ +G+V+++  G D +LGH       +P  L+  L    +  +A G  +  A++ Q  
Sbjct: 3084 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE 3142

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRV 280
               +Y+ G G  G+LGHG    +  P+L+    L   + V VA G+  A  +   +DG V
Sbjct: 3143 ---LYTWGLGEYGRLGHGDNVTQLKPKLV--VALAGRRVVQVACGSRDAQTLALTEDGAV 3197

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG G +G LG G  E    P  ++ L+ +  + +  G   +  ++  G+V+++G G+ 
Sbjct: 3198 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3257

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LGH       G++H  V  PQ +  L+    RV+ +++        H  A+T++G++Y
Sbjct: 3258 YRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVY 3302

Query: 401  AFGAGDKGQLG 411
            A+G  D GQ G
Sbjct: 3303 AWGDNDHGQQG 3313



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4091 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4150

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 4151 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4208

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4209 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4266

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  V V  G+  +  + + G V TWG G +  LGH
Sbjct: 4267 YGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4324

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4325 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 4383

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4384 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4412



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 154/342 (45%), Gaps = 22/342 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +PR + +L+  +I   A G+  +  
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3136

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            IS  G++Y +G   +G   +G   T+L   P+LV +L    VVQ A G  +  T  L+ +
Sbjct: 3137 ISSQGELYTWGLGEYGRLGHGDNVTQL--KPKLVVALAGRRVVQVACGSRDAQTLALTED 3194

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G V+++  G+  +LG         PH  +  L  I VVQI  G  + LAL        V+
Sbjct: 3195 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3250

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG     + P+ I   +    + + VA GA H   V   G+V  WG   
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3308

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-----VSEDGDVYSFGCGESAS 342
            +G  G GN      P +V  L+ V    VA G   +        S D +       +   
Sbjct: 3309 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEE-------KRGP 3361

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +   +  D  G     +   + V +LKQ  + + Q SL+ S+
Sbjct: 3362 VPFGSTRDPLGGSSLGIYEAETVQTLKQEAKPLNQSSLSESL 3403



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 37/339 (10%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            +I Q A    + +++S  G++Y + + +  EAE           P  +E + +   +  
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHEVFISI 616

Query: 155 A---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           A    G  F A+ S     Y++  G D RLGH        P  +   LE   V  +  G 
Sbjct: 617 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 674

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            Y  A+ C   G  + + G G   +LGHG+  D   P L+       +  V + +G  H+
Sbjct: 675 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 731

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +  +G V  WG G YG LG+GN      P +V++L  V+   V  G   +  +S +G 
Sbjct: 732 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSLALSSEGQ 789

Query: 332 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           +YS+  G++  LGH  +    QG        P+LV+SL+  ++R+V ++++      AH 
Sbjct: 790 LYSW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 835

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            AL+ SG+++ +G  D  Q+    V+++     P  V +
Sbjct: 836 LALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSL 874



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 144/328 (43%), Gaps = 42/328 (12%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQA 154
           QA A +  T   +   ++YA G  S  + + G      ++       V +L   F + Q 
Sbjct: 518 QATAASSST---TPQQRIYALGWPSLSKDQQGFSAEPTLSWSGESTAVPTLSCRFQIKQV 574

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           A       +LS+EG++YT+               + EP P+      +  + IA G+C  
Sbjct: 575 ACCETQMLILSQEGKLYTWRLAKP----------EAEPLPMEEVAHEV-FISIA-GHCEG 622

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
                  S    YS G G   +LGHG       P  I   +   +Q V    G  ++A +
Sbjct: 623 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAI 680

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDV 332
              G + TWG G Y  LGHGN +  S+P +V AL+D   + VA  +GD  +  ++ +G V
Sbjct: 681 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 740

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           +++G G+   LG+       GN + + L P LV SL +V +RV   S          + A
Sbjct: 741 FAWGDGDYGKLGN-------GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSLA 783

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQTE 420
           L+  G+LY++G      LG +LV    +
Sbjct: 784 LSSEGQLYSWGKATC--LGHQLVERSVQ 809



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3232 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3291

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3292 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3341



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 16/169 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+A+TS+G+V+++G    G+LG+G      +P  + SL   R+ +  AG+  ++ 
Sbjct: 726 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSLA 783

Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +S  GQ+Y++GK +  G    E  VQG  +   P+LV SL++  +V  A+       LS 
Sbjct: 784 LSSEGQLYSWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 840

Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
            G V  F WG ND++      P  V   PLL T  L ++P    +   C
Sbjct: 841 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 884



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G + ++G  +  +LGHG +++   P  + +L    ++  A G+G   ++
Sbjct: 673 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 732

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G V+A+G   +G+   G     L   P LVESL  +  V A  G+ F+  LS EG
Sbjct: 733 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSLALSSEG 788

Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
           ++Y  SWG    LGH      V+    P  L+ +L++  +V +A    + LAL+
Sbjct: 789 QLY--SWGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 839



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 18/239 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+ S    YS+G+    +LGHG T     P  I +L+   +     G   +  I+  
Sbjct: 624 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 683

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G +  +G+ ++    +G    +  + P LV +L +  VV  A+  G+  +  L+ EG V+
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 741

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+      ++P      +E++P VQ + AG  + LAL+   S   +YS G
Sbjct: 742 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSLALS---SEGQLYSWG 794

Query: 231 CG--LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
               LG +L   S      PRL+   Q   +  V VA    H   +   G V  +GWGR
Sbjct: 795 KATCLGHQLVERSVQGCSVPRLVSSLQHKRI--VDVAVSVAHCLALSSSGEV--FGWGR 849



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3044

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3045 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3091

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3092 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3117



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 102
           +  AG   S+A++S+G +YS+G  +   LGH   E   +    PR + SLQ  RI+  A 
Sbjct: 773 RVFAGSQFSLALSSEGQLYSWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 830

Query: 103 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 143
                + +S +G+V+ +G+ DS       V    L+ +P LV
Sbjct: 831 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 872


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH +  E  +P  I +L G  I+  A 
Sbjct: 34  RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPELIGALAGQHIVHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQV+++G  S G+   G+   +  VT P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +L+ IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G + T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 TRGQLG 328



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 30/315 (9%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G  SFG+   G     ++  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
               +LGH +E +  E   L+G L    +V +A G  + +AL+ Q     V+S G G  G
Sbjct: 61  NTKGQLGHESEGSKPE---LIGALAGQHIVHVACGESHSVALSDQGQ---VFSWGAGSDG 114

Query: 236 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG  +  D    PRLI++   LN Q ++ ++ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 294 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 413 ELVNNQTERGNPERV 427
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 164/349 (46%), Gaps = 28/349 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G +S GQ G G+  +   P P     +    + + A G   ++ + + G+VY  G ++ 
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +  +G+K    P+L+ +L    +V  A G   +  LS +G+V+++  G+D +LG  
Sbjct: 64  GQLGHESEGSK----PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLT 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 243
           T  + V    L+  L    ++QI+ G  + LALA   +    ++ G    G+LG G    
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA---ADGQFFTWGQNSYGQLGLGKECP 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+ ++    + L  V  AAG  H+  +   G V  WG    G LG  +E     P 
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V+ L   K ++++ G+  T V+++ G V++FG G    LGH+++ D    R        
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
               L+ +   V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G V+S+G+ S GQLG  T E+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++S+G+   G +      SPQ V+SL  I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG ++  +LG   E  D E    +  L +  VV I+ G  +   L    SG  V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 287 RYGCLGHG---NEECESVPK 303
             G LG G   N +C S  K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G NSSGQLG     +   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 176/373 (47%), Gaps = 36/373 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           +Y +G N  GQLG G+       P PI + Q +  I  A+G   T+ ++   +VY+ G +
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDANQSV--ISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            FG+   G Q ++    P LV       +   A G+FF+  ++  G +  F WG      
Sbjct: 59  EFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLL--FGWGRSLNGE 112

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
              + + +    LL  + +  VVQ+A G  + +AL  + +   + S G    G+LG GS 
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT---ILSWGSNTQGQLGLGSS 169

Query: 243 TDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 299
             E   P +I     LN  P+  + AGA+H+ V+   G + TWG   +G LGHGN +  +
Sbjct: 170 EIEFLEPTIIAS---LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQ 226

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           S P++V+ L   + + VA G+  +   + +G V+S+G G +  LGHN++        ANV
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSM--------ANV 278

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
             P+ +  L  +   V QI          HT +LT+  KL  FG     QLG    +N T
Sbjct: 279 TQPKKIMEL--MGTTVCQICCGRR-----HTISLTDKRKLLGFGLNSNNQLG---THNDT 328

Query: 420 ERGNPERVDIDLS 432
               P  + I L+
Sbjct: 329 SARLPITIPISLT 341



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 20/303 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H++ +TS   VYS GSN  GQLG    + + RP  +       I   AAG   ++ 
Sbjct: 38  SGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIA 95

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+++G ++ +G+   GE    +     +  P+L++ + +  VVQ A G      L+ EG 
Sbjct: 96  IAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +   SWG++ +    LG  +E   +EP  ++ +L   P+ QI AG  +   L+  PSG  
Sbjct: 153 I--LSWGSNTQGQLGLG-SSEIEFLEP-TIIASLNAFPISQICAGAYHSGVLS--PSG-T 205

Query: 226 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           +++ G    G+LGHG S + +  PRL++   L + + V VA G  H+    ++G V +WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSSPRLVK--TLRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G LGH +    + PK +  L       +  G   T  +++   +  FG   +  LG
Sbjct: 264 HGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323

Query: 345 -HN 346
            HN
Sbjct: 324 THN 326



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 6/236 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H IA+T +G + S+GSN+ GQLG G++E E+  P  I SL    I Q  AGA 
Sbjct: 136 QVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAY 195

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + ++S +G ++ +GK+++G+  +G       +SP+LV++L++  VV  A+G   +   +
Sbjct: 196 HSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           R G V+++  G + +LGH++  N  +P  ++  L    V QI  G  + ++L        
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLT---DKRK 310

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +   G     +LG  + T  + P  I      + Q   +AAG   +    Q+   C
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQSFSGSQNESSC 366



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
           SQ  AG  HS  ++  G ++++G N+ GQLGHG ++  +  PR +++L+   ++  A G 
Sbjct: 188 SQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGE 247

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             ++  +  G V+++G    G  + G      VT P+ +  L    V Q   G   T  L
Sbjct: 248 EHSVCRTRNGGVFSWGHG--GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISL 305

Query: 165 SREGRVYTFSWGNDARLGHHTE 186
           + + ++  F   ++ +LG H +
Sbjct: 306 TDKRKLLGFGLNSNNQLGTHND 327


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 159/319 (49%), Gaps = 18/319 (5%)

Query: 38  EACCRRENSQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
           E+   +E  +  A P   H +A+TS+G VYS+G+   G+LGHG T   ++ + +     +
Sbjct: 184 ESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKV-----L 238

Query: 96  RIIQAAAGAGR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----F 150
            I+      G+  M ++  G+VY++G    G   +G   ++    P LV  L        
Sbjct: 239 VIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSR--EEPTLVRGLSGKQLGRH 296

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           VV    G+ ++A ++ +G ++T+  GN  RLGH +  + + P  L+ +L+   V+ I  G
Sbjct: 297 VVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTP-TLVVSLKGRRVIDICCG 355

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
                 LA    G  V+S G G  GKLG G     K P++I++ Q  ++  V V  GA  
Sbjct: 356 SGDAQTLAVTDDG-TVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDI--VRVCCGAQF 412

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  + + G + TWG G    LGHG EE    PK ++ L   K + VA G     V++E+G
Sbjct: 413 SLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEG 472

Query: 331 DVYSFGCGESASLGHNAIA 349
           +VY +G  +   LG ++ +
Sbjct: 473 EVYGWGRNDQGQLGDSSFS 491



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 178/394 (45%), Gaps = 57/394 (14%)

Query: 25  GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
           G  +L+   LL    C      QA+ G G +  V   G +   G+NS    GH       
Sbjct: 91  GELRLIFTCLLYASRC----QEQAMPGTGSTQEVLGWGWLAWTGANSPNSSGH------- 139

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
                  L  + ++Q A      + ++  G+VY      F  +E   QG      PQL+E
Sbjct: 140 ---TCEMLGELGVLQLACAERCLIALTKTGRVYM----CFYSSES--QG------PQLME 184

Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           SL +  V++ A    G  + A L+ EG VY++  G+  RLGH       +   +L     
Sbjct: 185 SLADKEVLKVAAHPEGKHYMA-LTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVL----- 238

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNL 259
           + V        + +AL  +     VYS G G GG+LGHG     + P L+     + L  
Sbjct: 239 VIVYPYHPEGKHYMALTSEGE---VYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGR 295

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV--A 317
             V +  G+ ++A +  DG + TWG G YG LGHG+ E +  P +V +L   + I +   
Sbjct: 296 HVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCG 355

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
           +GD  T  V++DG V+S+G G+   LG    +DG         TP+++  L+   + +V+
Sbjct: 356 SGDAQTLAVTDDGTVWSWGDGDYGKLGRGG-SDG-------CKTPKIIDRLQ--GQDIVR 405

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +           + ALT++G ++ +G GD  +LG
Sbjct: 406 VCCGAQF-----SLALTKTGHIWTWGKGDSQRLG 434



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 43/363 (11%)

Query: 56  IAVTSKGVVYS--FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTMLIS 111
           IA+T  G VY   + S S G            P+ + SL    +++ AA       M ++
Sbjct: 160 IALTKTGRVYMCFYSSESQG------------PQLMESLADKEVLKVAAHPEGKHYMALT 207

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
             G+VY++G    G   +G           LV     I       G  + A L+ EG VY
Sbjct: 208 SEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV-----IVYPYHPEGKHYMA-LTSEGEVY 261

Query: 172 TFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           ++  G+  RLGH    +  EP     L G      VV I  G  Y  A+        +++
Sbjct: 262 SWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGE---LFT 318

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G+LGHGS  D+  P L+   +   +  +   +G      V  DG V +WG G Y
Sbjct: 319 WGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDY 378

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G  +    PK++  L     + V  G   +  +++ G ++++G G+S  LGH   
Sbjct: 379 GKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGT- 437

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                    ++  P+ +  L+   ++VV +++      + H   +TE G++Y +G  D+G
Sbjct: 438 -------EEHIRFPKQLEGLR--GKKVVDVAVG-----SMHCLVMTEEGEVYGWGRNDQG 483

Query: 409 QLG 411
           QLG
Sbjct: 484 QLG 486



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 8/205 (3%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--R 106
           + G  +S A+T+ G ++++G  + G+LGHG++E++  P  + SL+G R+I    G+G  +
Sbjct: 301 VCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQ 360

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ ++D G V+++G   +G  + G  G+    +P++++ L+   +V+   G  F+  L++
Sbjct: 361 TLAVTDDGTVWSWGDGDYG--KLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTK 418

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G ++T+  G+  RLGH TE +   P  L G L    VV +A G  + L +  +     V
Sbjct: 419 TGHIWTWGKGDSQRLGHGTEEHIRFPKQLEG-LRGKKVVDVAVGSMHCLVMTEEGE---V 474

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLI 251
           Y  G    G+LG  S + +  P L+
Sbjct: 475 YGWGRNDQGQLGDSSFSTKSDPTLM 499


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++  +   +  V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K   SPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L    +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL+   +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVY++G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VYS+G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY++   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V Q+A G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 175/348 (50%), Gaps = 25/348 (7%)

Query: 35  LAGEACCR-------RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           L G+ C +       ++  + + G   +  + + G V++ G  + G+LG GT+++E    
Sbjct: 304 LQGKTCLQPNLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLV 363

Query: 88  PIRSLQGIRIIQAAA---GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           PI  LQG  IIQ A    G G T+ ++D+G+V+++G   +G+  +G   ++    P+ + 
Sbjct: 364 PITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHG--NSERQRKPKQII 421

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L+   VVQA+ G   +AVL+++G+V+TF  G    LG         P  +L +L+N  +
Sbjct: 422 ALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLIL-SLKNEHI 480

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
            QIA G  + LALA   +G  +Y+ G G  GKLG GS +    P L++ ++ + L+   +
Sbjct: 481 SQIACGKDHTLALA--NNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKK--I 536

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
           A G+  + V+  +G + T+G   +  +   +    ++P++V +L     I +A G     
Sbjct: 537 ACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYIL 596

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            +   G+++ +G  E   LG      G  N H     PQLV +    N
Sbjct: 597 ALDNSGNIWGWGTNEEGQLGI-----GTTNPHY---LPQLVCTFSGTN 636



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 167/363 (46%), Gaps = 29/363 (7%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           +++   VY +GSN  G+L     +   +P  + + + +R  +   G   T L+   G V+
Sbjct: 284 ISAPITVYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVR--EIVCGQNCTFLLQTNGSVF 341

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFS 174
           A G+ ++G    G    +    P  +  L+   ++Q A    G+  T  ++  G V+++ 
Sbjct: 342 ACGEGTYGRLGQGTSDDEHSLVP--ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWG 399

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            G+  +LGH       +P  ++  L+   VVQ + G+ +   L        V++ G G  
Sbjct: 400 DGDYGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKHSAVLT---KDGKVFTFGQGQY 455

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGH 293
           G LG G  + +K P+LI    L N     +A G  H   +  +G+ +  WG G +G LG 
Sbjct: 456 GILGDGGNSPQKTPQLI--LSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+    S+P +V +  +V    +A G   + V++ +G +Y+FG  +   +    + D   
Sbjct: 514 GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNT- 572

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                   PQ+V+SL  +   ++ I++  +     +  AL  SG ++ +G  ++GQLGI 
Sbjct: 573 -------IPQIVSSL--MPHPIIDIAVGCN-----YILALDNSGNIWGWGTNEEGQLGIG 618

Query: 414 LVN 416
             N
Sbjct: 619 TTN 621



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 11/281 (3%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           C  + + ++ G GH++AV   G V+S+G    G+LGHG +E + +P+ I +LQ   ++QA
Sbjct: 372 CIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQA 431

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   + +++  G+V+ FG+  +G    G  G     +PQL+ SLKN  + Q A G   
Sbjct: 432 SCGFKHSAVLTKDGKVFTFGQGQYG--ILGDGGNSPQKTPQLILSLKNEHISQIACGKDH 489

Query: 161 TAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           T  L+  G ++Y +  G   +LG  +      P+ L+ +  N+ + +IA G  + + LA 
Sbjct: 490 TLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPN-LVDSYRNVCLKKIACGSKFSIVLA- 547

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
             +   +Y+ G      +      D   P+++     L   P++ +A G  +   +   G
Sbjct: 548 --TNGYLYTFGHKDFLGIAETDLLDNTIPQIVSS---LMPHPIIDIAVGCNYILALDNSG 602

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            +  WG    G LG G      +P++V   +      ++ G
Sbjct: 603 NIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAG 643



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 104/206 (50%), Gaps = 20/206 (9%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-LLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           +V++ G G  G+LG G+  DE     I + Q    +Q      G  H   V   G V +W
Sbjct: 339 SVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSW 398

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G YG LGHGN E +  PK + AL     +  + G   + V+++DG V++FG G+   L
Sbjct: 399 GDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGIL 458

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYAF 402
           G     DG GN      TPQL+ SLK  NE + QI+         HT AL  +G KLYA+
Sbjct: 459 G-----DG-GNSPQK--TPQLILSLK--NEHISQIACGKD-----HTLALANNGKKLYAW 503

Query: 403 GAGDKGQLGIELVNNQTERGNPERVD 428
           G G+ G+LG+    + + R  P  VD
Sbjct: 504 GDGEFGKLGL---GSTSVRSIPNLVD 526


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVY++G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VYS+G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY++   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V Q+A G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKK-QTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   L+ +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P  I +L G  I+  A 
Sbjct: 34  RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDC--EGSKPEQIGALAGQHIVHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G+   G+   +  VT P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +L+ IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G + T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 TRGQLG 328



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 30/312 (9%)

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G  SFG+   G     +V  PQ+   + +  V + A G   +  L  +G VYT      
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH  E +  E    +G L    +V +A G  + LAL+ Q     ++S G G  G+LG
Sbjct: 64  GQLGHDCEGSKPEQ---IGALAGQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLG 117

Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
             +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   YG LG G E
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174

Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
              ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +   
Sbjct: 175 CPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG + +
Sbjct: 235 HVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 416 NNQTERGNPERV 427
           N++    NP RV
Sbjct: 280 NDEV---NPRRV 288



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 28/349 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G +S GQ G G+  +   P P     +    + + A G   ++ + + G+VY  G ++ 
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +  +G+K    P+ + +L    +V  A G   +  LS +G+++++  G+D +LG  
Sbjct: 64  GQLGHDCEGSK----PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLT 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
           T  + V    L+  L    ++Q++ G  + LALA        ++ G    G+LG G    
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ---FFTWGQNSYGQLGLGKECP 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+ ++    + L  V  AAG  H+  +   G V  WG    G LG  +E     P 
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V+ L   K ++++ G+  T V+++ G V++FG G    LGH+++ D    R        
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
               L+ +   V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  T E+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++S+G+   G +      SPQ V+SL  I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG ++  +LG   E  D E    +  L +  VV I+ G  +   L    SG  V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 287 RYGCLGHG---NEECESVPK 303
             G LG G   N +C S  K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G NSSGQLG     +   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 162/330 (49%), Gaps = 25/330 (7%)

Query: 7   IFKPMTEAERQDLKQ-KCGGSWK-LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVV 64
           + KP+  A R D++   CGG    LV +     +A           G  H+ AVT  G +
Sbjct: 197 VPKPLEFAVRLDVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDL 256

Query: 65  YSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           Y++G  +   G LGHG     W P+ +   L+GI +   + G   T L++ AGQ++ FG 
Sbjct: 257 YTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGD 316

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREGR 169
            SFG   +G + +  ++ P+ VESLK +  V+AA G + TA +               G+
Sbjct: 317 GSFGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGK 374

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           ++T+  G+  RLGH  +   + P   +  L      Q+A G+C  +AL    +   VY++
Sbjct: 375 IFTWGDGDKGRLGHGDKEPKLVP-TCVAALVEPNFCQVACGHCLTVALT---TSGHVYTM 430

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G  + G+LG+ ++ D   P  +E     N    + + GA+H AV+     V TWG G  G
Sbjct: 431 GSAVYGQLGN-AQADGMLPVRVEGKLYKNFVEEI-SCGAYHVAVLTSRTEVYTWGKGANG 488

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATG 319
            LGHG+ E ++ P +V+AL D +  +V  G
Sbjct: 489 RLGHGDTEDKNTPTLVEALKDKQVRNVVCG 518



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  E    PR + SL+G+R ++AA G   T  +
Sbjct: 298 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 357

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV  P  V +L      Q A G+
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLV--PTCVAALVEPNFCQVACGH 415

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 416 CLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLYKNFVEEISCGAYHVAVLT 474

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 475 ---SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAICIHKWV 531

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 532 SGVDQSMCS 540



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 128/287 (44%), Gaps = 38/287 (13%)

Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLL 196
           +L+++L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + 
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVN 284

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
           G LE I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E  + 
Sbjct: 285 GPLEGIHVSSISCGPWHT---ALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK- 340

Query: 257 LNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKV 304
             L+ V  A G WH A V +             G++ TWG G  G LGHG++E + VP  
Sbjct: 341 -GLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTC 399

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           V AL +     VA G   T  ++  G VY+ G      LG NA ADG        + P  
Sbjct: 400 VAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADG--------MLPVR 450

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V   K     V +IS     Y   H   LT   ++Y +G G  G+LG
Sbjct: 451 VEG-KLYKNFVEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 491



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 33/246 (13%)

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           L+  L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +   
Sbjct: 228 LIDALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG- 285

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  +    ++ G WH A+V   G++ T+G G +G LGHG+ E  SVP+ V++L  ++ +
Sbjct: 286 PLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTV 345

Query: 315 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
             A G + T  V E             G ++++G G+   LGH       G++    L P
Sbjct: 346 RAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGH-------GDKEPK-LVP 397

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
             V +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +  
Sbjct: 398 TCVAALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NAQADGM 446

Query: 423 NPERVD 428
            P RV+
Sbjct: 447 LPVRVE 452


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +   +D +LG  
Sbjct: 64  GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 34  LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
           LL  E C R   +          Q   G  HS+A++    V+ +G N  GQLG G   ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177

Query: 83  EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
           +  P+ I+SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           ++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+ AG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVTAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ ++G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              V  G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT++G ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 26/315 (8%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A G 
Sbjct: 38  EVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGE 93

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             +  LS  G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LALA
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                   ++ G    G+LG G     +  P+ +   + + L  V   AG  H+  +   
Sbjct: 154 ADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--TAGGAHSFALSLS 208

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V++++G V++FG 
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGA 268

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 396
           G    LGH+++ D    R            L+ +   V QI+         HT A    S
Sbjct: 269 GSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVPSS 313

Query: 397 GKLYAFGAGDKGQLG 411
           G +YAFG G +GQLG
Sbjct: 314 GLIYAFGCGARGQLG 328



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q  AG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q   G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVTAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L        V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT---KNGGVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++  G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 158/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G+    L +  G+V+ +G++  G   +G      +  P+LVES
Sbjct: 266 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVES 323

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T V++  G +Y   WG    N   LGH T  +   P  + G LE 
Sbjct: 324 LAVSNVEYIACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 381

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +    A   S   +++ G G  G LGHG R    +P+ +E   L   + 
Sbjct: 382 LQVLSVACGSWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRA 436

Query: 262 VVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A +              ++ TWG G    LGHG++E + VP  VQAL D 
Sbjct: 437 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 496

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  ++  G V++ G   +  LG N  ADG+         P +V   K  
Sbjct: 497 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLG 546

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           NE V +IS  ++     H  ALT   ++Y +G G  G+LG
Sbjct: 547 NELVEEISCGSN-----HVAALTSRSEVYTWGMGANGRLG 581



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+  VT+ G +Y +G  S  +G LGHGT    W P+ +   L+G++++  
Sbjct: 328 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 387

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G+  + L   +G+++ FG  +FG   +G + +  V  P+ VE+L     ++ A G + 
Sbjct: 388 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 445

Query: 161 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           +A +          +   +++T+  G+  RLGH  +   + P   +  L +    Q+A G
Sbjct: 446 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 504

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           +   +ALA   +   V+++G    G+LG+  + D K P ++ Q +L N     ++ G+ H
Sbjct: 505 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 559

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            A +     V TWG G  G LGHG+ E +  P +V AL D     ++ G ++TT +
Sbjct: 560 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 615



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 43/322 (13%)

Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           I   G VY +G+       S G + Y    T  +  P+ +ES   + V Q A G+    +
Sbjct: 231 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 289

Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            +R+G V+T  WG +   RLGH T+ +   P  L+ +L    V  IA G  +   +    
Sbjct: 290 TTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVESLAVSNVEYIACGEFHTCVVTA-- 344

Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G G    G LGHG+      P+ +    L  LQ + VA G+WH+A+    G+
Sbjct: 345 SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 402

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 329
           + T+G G +G LGHG+ E  + PK V+AL+  +A+ VA G + +  + E           
Sbjct: 403 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 462

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
             ++++G G+   LGH       G++ A  L P  V +L  V+    Q++  +S+     
Sbjct: 463 RKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQAL--VDHNFHQVACGHSM----- 507

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T AL  SG ++  G+ + GQLG
Sbjct: 508 TVALATSGHVFTMGSSNNGQLG 529


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4237 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4296

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +
Sbjct: 4297 SGGRLGVGGADSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4354

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4355 LGHGNRMSYDRPK-LVEHLNGMNVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4410

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4411 DSEDQLRPQLVE--ALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDG 4468

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4469 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4520

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4521 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 4566



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ +  + G VY+ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 3133 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3192

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L++  +   A G+  +A +S
Sbjct: 3193 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAAIS 3250

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G      LA    G A
Sbjct: 3251 SQGELYTWGLGEYGRLGHGDNSTQLKPK-LVAALAGRRVIQVACGSRDAQTLALTEDG-A 3308

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  + +  GA  +  + + G V TWG 
Sbjct: 3309 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3366

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3423

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
                 G GN   N   P LV  L  V    V    ++SI W      L E  +
Sbjct: 3424 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNATLEEEKR 3471



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 169/353 (47%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P   +++  +R I  A G+    ++   G+VYA G+ 
Sbjct: 3096 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEG 3155

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 3156 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3213

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH       +P  L+ TL +  +  +A G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 3214 LGHGNRTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3269

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
              + +  P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 3270 DNSTQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3327

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
               P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 3328 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3379

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  PQ +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3380 VRKPQPIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3425



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 161/343 (46%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G  +    P  + SLQ + + + A  +G    + ++  
Sbjct: 4282 FAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4341

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 4342 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTW 4399

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4400 GKGRYGRLGHGDSEDQLRPQ-LVEALLGYRAIDIACGSGDAQTL-CINDDDNVWSWGDGD 4457

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE    L +  + V  G+  +  + + G V TWG G +  LGH
Sbjct: 4458 YGKLGRGGSDGCKLPYKIESLAGLGV--IKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4515

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4516 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 4574

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4575 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4603



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 165/361 (45%), Gaps = 52/361 (14%)

Query: 64  VYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQV 116
           VY+ G  S  +  HG   E    W   P  SL       ++ Q        +++S+ G++
Sbjct: 539 VYALGWPSLSKEQHGFNAEPALSWSSDP-SSLPLLNCKFQVQQIVCSESIVLILSEDGKL 597

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAV-LSREGRVYT 172
           Y +            +  K  T PQL+E + +  +V  A    G  F A+ ++R      
Sbjct: 598 YNW------------RMFKPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNA---- 641

Query: 173 FSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           +SWGN  D RLGH        P  +  TL +  V  +  G  Y  A+ C  SG  +Y+ G
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKI--TLLDRCVKAVFCGCSYSAAITC--SG-NLYTWG 696

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
            G   +LGHG+  D+  P ++       +  V + +G  H+  +  +G V  WG   YG 
Sbjct: 697 RGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGK 756

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG+GN      P +V++L  V+   V  G   +  ++ DG +YS+  G+++ LGH  +  
Sbjct: 757 LGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMALTTDGQLYSW--GKASCLGHQLV-- 810

Query: 351 GQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               R A   + P+L++ L+  ++R+V +++       AH  AL+  G+++ +G  D  Q
Sbjct: 811 ---ERSAQWCSVPRLISGLQ--HKRIVDVAVG-----VAHCLALSSCGEVFGWGRNDSQQ 860

Query: 410 L 410
           +
Sbjct: 861 I 861



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3344 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3403

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3404 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3453



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 20/236 (8%)

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLL 215
           G  ++A ++  G +YT+  G  ARLGH    +D +P P ++  L    ++ +A G     
Sbjct: 679 GCSYSAAITCSGNLYTWGRGTYARLGHGN--SDDQPLPTVVMALTEHEIIDVALGSGDAH 736

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           +L C  S   VY+ G    GKLG+G+      P L+E    +      V AGA  +  + 
Sbjct: 737 SL-CLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ----RVFAGAQFSMALT 791

Query: 276 QDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
            DG++  + WG+  CLGH   E      SVP+++  L   + + VA G      +S  G+
Sbjct: 792 TDGQL--YSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGE 849

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           V+ +G  +S  +  ++++         +L   ++ +L  +    V  + + S+ W 
Sbjct: 850 VFGWGRNDSQQICPSSVSS------EPLLRVPILVALPTLPASGVACTASQSLIWT 899



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 16/168 (9%)

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           E  P+L+E+     +  +       H   +  +    +WG G    LGHG+    +VP  
Sbjct: 606 ETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTK 665

Query: 305 VQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           +  L+  VKA+    G   +  ++  G++Y++G G  A LGH       GN     L P 
Sbjct: 666 ITLLDRCVKAVFC--GCSYSAAITCSGNLYTWGRGTYARLGH-------GNSDDQPL-PT 715

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +V +L +    ++ ++L +    +AH+  LT  G +YA+G  D G+LG
Sbjct: 716 VVMALTE--HEIIDVALGSG---DAHSLCLTSEGHVYAWGDADYGKLG 758



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+V ++G VY+ G G 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 3156

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3157 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3203

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3204 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3229


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 174/375 (46%), Gaps = 35/375 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           + ++G+   GQLG G  EE+     + +L+  ++    AG+  ++ I D G+++ +G + 
Sbjct: 7   LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK    P  V++L N+ +VQAAIG +    +  +GR Y +      + G 
Sbjct: 67  RGTLGHPAE-TKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 184 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
             E  D     L   +         + V Q+AAG  + + L  +     V++     G  
Sbjct: 126 EPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT----WGQP 178

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
              G       P  ++  + + L    +A GA+H   + +DG +  WG   YG LG G+ 
Sbjct: 179 WPPGDIKQISVPVRVQGLEKVKL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDT 234

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           +  S P  VQ L+ +  + +A G + +  +++DG+VY +G GE   LG         N  
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD------NDK 288

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           ++ + PQ V  L    E +VQ+S   +     H+ ALT+ G++++FG GD G+LG     
Sbjct: 289 SSKMVPQKVNLL--AGEDIVQLSCGGT-----HSVALTQDGRMFSFGRGDHGRLGY---G 338

Query: 417 NQTERGNPERVDIDL 431
            +   G P  V  D+
Sbjct: 339 KKVTTGQPVEVPTDI 353



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 27/309 (8%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  + I+QAA G    
Sbjct: 44  VAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA--------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           + + D G+ YA+G + +G+         + G    + +  PQ       + V Q A G  
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQ--RCAPKLVVRQVAAGGT 161

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALA 218
            + VL+REG V+T+        G    P D++   +   ++ +  V+ IA G  + LAL 
Sbjct: 162 HSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLAL- 212

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            Q  G  +++ G    G+LG G       P  ++    L L  V +AAG WH+  +  DG
Sbjct: 213 -QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDG 268

Query: 279 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V  WG G +G LG G+ +  S  VP+ V  L     + ++ G   +  +++DG ++SFG
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG 328

Query: 337 CGESASLGH 345
            G+   LG+
Sbjct: 329 RGDHGRLGY 337



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 15/175 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+   G ++++G+N  GQLG G T+   +P P++ L G+ ++  AAG   +  ++D 
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 267

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+VY +G+   G   +G         PQ V  L    +VQ + G   +  L+++GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSF 327

Query: 174 SWGNDARLGHHTE---------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             G+  RLG+  +         P D+ P   L   E       A G+     +AC
Sbjct: 328 GRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEE------AEGHWIAKLVAC 376


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 177/363 (48%), Gaps = 31/363 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G+ + G+LG G  EEE    PR +   Q   +++   G   T+ ++  G++YA G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           +  G+  + +  T     PQ + SL+N  +   + G   +  L+  G+V  FSWG++A  
Sbjct: 63  NDHGQLGHDLD-TLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQV--FSWGSNAVG 119

Query: 180 RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
           +LGH  E N  +P P ++  +    VVQIA+G  + LAL    +   +Y+ G    G+LG
Sbjct: 120 QLGHDAE-NGRQPTPRMIKAIGAKHVVQIASGQYHCLALT---NNGELYAWGSNSYGQLG 175

Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            G+ +++   P LI+   L  +    +A G  H+  V + G +  WG   +G LG  +  
Sbjct: 176 IGTTSEKVPMPTLIQS--LAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 233

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
               P  ++ L  +   +++ GD  +  ++ +G V++ G G    LGH +         +
Sbjct: 234 SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC--------S 285

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVN 416
           N + P+ V  L  +  ++ QI+         HT A   S GK+Y FG G  GQLGI +V 
Sbjct: 286 NEIVPRKVFEL--MGSKITQIACGRR-----HTLAFVPSRGKIYGFGLGGVGQLGIGMVG 338

Query: 417 NQT 419
           N +
Sbjct: 339 NHS 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 28/323 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++ +T +G +Y+ G+N  GQLGH   T    RP+ + SL+   I   + G   ++ 
Sbjct: 44  GTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLA 103

Query: 110 ISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           +++ GQV+++G ++ G    +AE G Q T     P++++++    VVQ A G +    L+
Sbjct: 104 LTNWGQVFSWGSNAVGQLGHDAENGRQPT-----PRMIKAIGAKHVVQIASGQYHCLALT 158

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
             G +Y  +WG+++  +LG  T    V    L+ +L  +P+  IA G  +  + A   SG
Sbjct: 159 NNGELY--AWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNH--SFAVSKSG 214

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            A++  G    G+LG        +P  +   + L ++   ++ G   +  +  +G V T 
Sbjct: 215 -AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR--YISCGDDFSVFLTNEGGVFTC 271

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 342
           G G +G LGHG+   E VP+ V  L   K   +A G  +T   V   G +Y FG G    
Sbjct: 272 GAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQ 331

Query: 343 LGHNAIADGQGNRHANVLTPQLV 365
           LG   +         N  TPQ+V
Sbjct: 332 LGIGMV--------GNHSTPQIV 346



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A+T+ G V+S+GSN+ GQLGH      +  PR I+++    ++Q A+G    + 
Sbjct: 97  GTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLA 156

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +++ G++YA+G +S+G+   G    K V  P L++SL  + +   A G   +  +S+ G 
Sbjct: 157 LTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 215

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG +   +   P   L TL ++ V  I+ G  + + L  +     V+
Sbjct: 216 I--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSLGVRYISCGDDFSVFLTNEG---GVF 269

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGHGS ++E  PR +  F+L+  +   +A G  H  A V   G++  +G G
Sbjct: 270 TCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 327

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G     S P++V+
Sbjct: 328 GVGQLGIGMVGNHSTPQIVR 347



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 6/206 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
           Q  +G  H +A+T+ G +Y++GSNS GQLG GTT E+   P  I+SL G+ I   A G  
Sbjct: 146 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGN 205

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G ++ +GK++FG+   G+        P  + +L+++ V   + G+ F+  L+
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQL--GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT 263

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            EG V+T   G   +LGH +  N++ P  +   L    + QIA G  + LA    PS   
Sbjct: 264 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-ELMGSKITQIACGRRHTLAFV--PSRGK 320

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
           +Y  G G  G+LG G   +   P+++
Sbjct: 321 IYGFGLGGVGQLGIGMVGNHSTPQIV 346


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 19/300 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVY++G DS  + + G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYSWGLDS--DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  F WG +   +LG   +        L+ +L  IP +Q+AAG  + ++L L    SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++  G    G+LG     D   P L++   L + + V +  G  H A + ++G V T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G YG LGH +   E  P+ V  L       VA G  +T+  V   G +YSFG G +  LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VYS+G +S GQLG   +EE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY++   +D +LG  
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP 
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +++  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           +VT +    +               HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V Q+A G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 154/294 (52%), Gaps = 24/294 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +   G LGHG     W P+ I  +L+G+++   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
            LI+  GQ++ FG  SFG   +G    K V+ P+ VESL  +  +  A G + TA     
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 163 VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           +++R         G+++T+  G+  RLGH  +   ++P   + TL +    ++A G+   
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVATLIDHDFYRVACGHSLT 313

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    +   V S+G  + G+LG+   +D + P L+E  +++  Q + +A G++H AV+
Sbjct: 314 VALT---TSGQVLSMGNAVYGQLGN-PHSDGRIPCLVED-KIVGEQVLQIACGSYHVAVL 368

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
                V TWG G  G LGHG+ E   VP +V+AL D    ++A G   T  + +
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAICQ 422



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 151/341 (44%), Gaps = 37/341 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L+   G+V+ +G+DS G   +G +  +    P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G +YT+  G  N   LGH  +     P  + G LE + 
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQ 185

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  ++ G  +   +    S   +++ G G  G LGHG      +PR +E   L  L+ + 
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVE--SLSGLKTIA 240

Query: 264 VAAGAWHAAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           VA G WH A + +              G++ TWG G    LGHG++E    P  V  L D
Sbjct: 241 VACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID 300

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V S G         NA+    GN H++   P LV   K 
Sbjct: 301 HDFYRVACGHSLTVALTTSGQVLSMG---------NAVYGQLGNPHSDGRIPCLVED-KI 350

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V E+V+QI+       + H   LT   +++ +G G  G+LG
Sbjct: 351 VGEQVLQIACG-----SYHVAVLTNRSEVFTWGKGANGRLG 386


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        RI     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L  I +VQ+A GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176

Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           +++ P +I+   LL +    +AAG  H+ V+   G +  WG  ++G LG  ++    VP 
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +H+  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           LVT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 LVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 152/303 (50%), Gaps = 25/303 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH    +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G  + G+   G+ GT + +  P+ ++SL  I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSG 223
           V  FSWG +      LG+  +  +  PH ++ +L  IP  QIAAG  + ++L L    SG
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL----SG 209

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
            A++  G    G+LG     D   P L++    L  Q VV +  G  H A + ++G V T
Sbjct: 210 -AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFT 265

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESA 341
           +G G YG LGH +   E  P+ V  L       +  G  +TT  V   G +YSFG G + 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325

Query: 342 SLG 344
            LG
Sbjct: 326 QLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G  + GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++ +G+   G +  K   SP +++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + + ND     LL +L    VV I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +  G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G       P  V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P  I+SL GI   Q AAG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+        + V  P L++SL+   VV    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + ++ V QI  G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +++    G  
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q   G    TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y+F  G + +LG  T  N   P  + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R   +   G  HS+ +   G VY+ G N+ GQLGH    E  +P  I +L G  I+  A 
Sbjct: 34  RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDC--EGSKPEQIGALAGQHIVHVAC 91

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   ++ +SD GQ++++G  S G+   G+   +  VT P+L++ L    ++Q + GN+  
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHC 149

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             L+ +G+ +T+   +  +LG   E P+   P   + +L+ IP+ Q+AAG  +  AL+  
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
            SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G  H AV+ + G 
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
           V T+G G  G LGH +   E  P+ V  L   +   +A G + T   V   G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 339 ESASLG 344
               LG
Sbjct: 323 TRGQLG 328



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 30/315 (9%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G  S+G+   G     ++  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
               +LGH  E +  E    +G L    +V +A G  + +AL+ Q     ++S G G  G
Sbjct: 61  NTKGQLGHDCEGSKPEQ---IGALAGQHIVHVACGESHSVALSDQGQ---LFSWGAGSDG 114

Query: 236 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 294 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 413 ELVNNQTERGNPERV 427
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 28/349 (8%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G +S GQ G G+  +   P P     +    + + A G   ++ + + G+VY  G ++ 
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +  +G+K    P+ + +L    +V  A G   +  LS +G+++++  G+D +LG  
Sbjct: 64  GQLGHDCEGSK----PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLT 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 243
           T  + V    L+  L    ++Q++ G  + LALA   +    ++ G    G+LG G    
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA---ADGQFFTWGQNSYGQLGLGKECP 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+ ++    + L  V  AAG  H+  +   G V  WG    G LG  +E     P 
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V+ L   K ++++ G+  T V+++ G V++FG G    LGH+++ D    R        
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
               L+ +   V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  T E+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++S+G+   G +      SPQ V+SL  I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG ++  +LG   E  D E    +  L +  VV I+ G  +   L    SG  V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 287 RYGCLGHG---NEECESVPK 303
             G LG G   N +C S  K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G NSSGQLG     +   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G    + +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
             T+  V  P++++ L    ++Q + GN+ +  L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PR+I++ 
Sbjct: 78  IGALADQHIVHVACGESHNLALSDRGQ---LFSWGAGSDGQLGLMTTEDAVAVPRVIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH+  +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 148/317 (46%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G      LS  G+++++  G+D +LG  T  + V    ++  L    ++Q++ G  + LA
Sbjct: 92  GESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  V  AAG  H+  + 
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 141 QVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   +   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G   ++ 
Sbjct: 92  GESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    E+   P  ++ L+  +++  + G  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        RI     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L  I +VQ+A GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176

Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           +++ P +I+   LL +    +AAG  H+ V+   G +  WG  ++G LG  ++    VP 
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +H+  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           LVT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 LVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 152/303 (50%), Gaps = 25/303 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH    +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G  + G+   G+ GT + +  P+ ++SL  I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSG 223
           V  FSWG +      LG+  +  +  PH ++ +L  IP  QIAAG  + ++L L    SG
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL----SG 209

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
            A++  G    G+LG     D   P L++    L  Q VV +  G  H A + ++G V T
Sbjct: 210 -AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFT 265

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESA 341
           +G G YG LGH +   E  P+ V  L       +  G  +TT  V   G +YSFG G + 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325

Query: 342 SLG 344
            LG
Sbjct: 326 QLG 328



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G  + GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++ +G+   G +  K   SP +++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + + ND     LL +L    VV I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +  G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G       P  V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P  I+SL GI   Q AAG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+        + V  P L++SL+   VV    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + ++ V QI  G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +++    G  
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q   G    TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y+F  G + +LG  T  N   P  + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4071 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4130

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ +G VY +  G D +
Sbjct: 4131 SGGRLGVGGSDSWSI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4188

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  LL  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4189 LGHGNRLSYDRPK-LLEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4244

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4245 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4302

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4303 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4354

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A +++G++Y +G  D+GQLG
Sbjct: 4355 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAGEVYTWGDNDEGQLG 4400



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 161/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ V S+ G V++ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 2950 IAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3009

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   A G+  +A +S
Sbjct: 3010 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3067

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G      LA    G A
Sbjct: 3068 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALCGSRVIQVACGSRDAQTLALTEDG-A 3125

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  V +  GA  +  + + G V TWG 
Sbjct: 3126 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 3183

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3240

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                 G GN   N   P LV  L  V    V    ++S+ W
Sbjct: 3241 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSMAW 3276



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P   +++  +R I  A G+    ++S  G+V+A G+ 
Sbjct: 2913 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEG 2972

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 2973 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3030

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH       +P  L+  L    +  IA G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 3031 LGHGNRTTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3086

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
                +  P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 3087 DNATQLKPKLVTA--LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3144

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             + P  ++ L+ +  + +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 3145 SATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3196

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  PQ +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3197 VRKPQPIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3242



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4116 FAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4175

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+L+E L  + V   A G+  +A ++  G V T+
Sbjct: 4176 GEVYAWGEGEDGKLGHGNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTW 4233

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4234 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4291

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  + V  G+  +  + + G V TWG G +  LGH
Sbjct: 4292 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4349

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 4350 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ- 4408

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4409 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4437



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 142/327 (43%), Gaps = 49/327 (14%)

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---------SPQLVESLKNIFVVQAAI 156
           RT+L  +  +VYA G  +  + + G      ++          P L+       V Q A 
Sbjct: 547 RTLL--EQQRVYALGWPTLSKEQQGFNVEPALSWTSASTQRPPPALLNC--KFHVKQVAC 602

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLL 215
                 +LS+EG++Y +          H    D EP PL  G + +   + IA+ +C   
Sbjct: 603 SKDIVLLLSKEGKLYNW----------HISKPDTEPQPLDFGDIGSETFISIAS-HCEGR 651

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
                 +    YS G G   +LGHG     + P  IE    L  +   V  G  ++A + 
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIES---LVRRVKSVYCGCSYSAAIT 708

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVY 333
             G + TWG G YG LGHG  + + +P +V AL D + + VA  +GD  T  ++ +G VY
Sbjct: 709 LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G G+   LG NA  +         L P L+  L +V +RV   S          + AL
Sbjct: 769 AWGDGDYGKLG-NASCNSS-------LQPLLIECLPRV-QRVFAGS--------QFSLAL 811

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQTE 420
           T  G+LY++G      LG +LV    +
Sbjct: 812 TGEGQLYSWGKASC--LGHQLVERNVQ 836



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 14/187 (7%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           E+  RR  S    G  +S A+T +G +Y++G  + G+LGHG ++++  P  + +L+  ++
Sbjct: 688 ESLVRRVKS-VYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQV 746

Query: 98  IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +  A G+G   T+ +++ G VYA+G   +G  + G         P L+E L  +  V A 
Sbjct: 747 VDVALGSGDAHTLCLTNEGLVYAWGDGDYG--KLGNASCNSSLQPLLIECLPRVQRVFA- 803

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
            G+ F+  L+ EG++Y  SWG  + LGH     +V+    P  L+ +L++  +V +A G 
Sbjct: 804 -GSQFSLALTGEGQLY--SWGKASCLGHQLVERNVQGCSVPR-LITSLQHKRIVDVAVGV 859

Query: 212 CYLLALA 218
            + LAL+
Sbjct: 860 THCLALS 866



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +AV +    YS+G+  + +LGHG       P  I SL   R+     G   +  I+  
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAAITLR 710

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G +Y +G+ ++G   +G+   + +  P +V +LK+  VV  A+  G+  T  L+ EG VY
Sbjct: 711 GNLYTWGRGNYGRLGHGISDDQCL--PTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+ +  + ++  PLL  +E +P VQ + AG  + LAL  +    +     
Sbjct: 769 AWGDGDYGKLGNASCNSSLQ--PLL--IECLPRVQRVFAGSQFSLALTGEGQLYSWGKAS 824

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           C LG +L   +      PRLI   Q  + + V VA G  H   +   G +  +GWGR
Sbjct: 825 C-LGHQLVERNVQGCSVPRLITSLQ--HKRIVDVAVGVTHCLALSSAGEI--FGWGR 876



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3161 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3220

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3221 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3270



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           LV  +K+++      G  ++A ++  G +YT+  GN  RLGH    +   P  ++  L++
Sbjct: 690 LVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLP-TMVMALKD 743

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
             VV +A G      L     G+ VY+ G G  GKLG+ S      P LIE    +    
Sbjct: 744 HQVVDVALGSGDAHTLCLTNEGL-VYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ--- 799

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAIHVA 317
             V AG+  +  +  +G++  + WG+  CLGH     N +  SVP+++ +L   + + VA
Sbjct: 800 -RVFAGSQFSLALTGEGQL--YSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVA 856

Query: 318 TGDYTTFVVSEDGDVYSFG 336
            G      +S  G+++ +G
Sbjct: 857 VGVTHCLALSSAGEIFGWG 875



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + FVVS+DG V++ G G 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 2974 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3020

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3021 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3046



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 13/127 (10%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIR 96
           C     +  AG   S+A+T +G +YS+G  S   LGH   E   +    PR I SLQ  R
Sbjct: 794 CLPRVQRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKR 851

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGE-------AEYGVQGTKLVTSPQLVESLKNI 149
           I+  A G    + +S AG+++ +G++   +       +E  ++   LVT P L  S    
Sbjct: 852 IVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASVCSEPLLRQPILVTLPTLPASGMAC 911

Query: 150 FVVQAAI 156
             VQ+ I
Sbjct: 912 TAVQSLI 918


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        RI     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L  I +VQ+A GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176

Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           +++ P +I+   LL +    +AAG  H+ V+   G +  WG  ++G LG  ++    VP 
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +H+  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
           LVT          QI+         HT A    SG++Y+FG G  GQLG    +N+    
Sbjct: 295 LVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPF 339

Query: 419 TERGN 423
           T +GN
Sbjct: 340 TVKGN 344



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 152/303 (50%), Gaps = 25/303 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH    +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G  + G+   G+ GT + +  P+ ++SL  I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSG 223
           V  FSWG +      LG+  +  +  PH ++ +L  IP  QIAAG  + ++L L    SG
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL----SG 209

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
            A++  G    G+LG     D   P L++    L  Q VV +  G  H A + ++G V T
Sbjct: 210 -AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFT 265

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESA 341
           +G G YG LGH +   E  P+ V  L       +  G  +TT  V   G +YSFG G + 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325

Query: 342 SLG 344
            LG
Sbjct: 326 QLG 328



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G  + GQLG   TEE  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++ +G+   G +  K   SP +++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + + ND     LL +L    VV I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +  G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G       P  V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P  I+SL GI   Q AAG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+        + V  P L++SL+   VV    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + ++ V QI  G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +++    G  
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q   G    TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y+F  G + +LG  T  N   P  + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 158/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G+    L +  G+V+ +G++  G   +G      +  P+LVES
Sbjct: 252 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVES 309

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T V++  G +Y   WG    N   LGH T  +   P  + G LE 
Sbjct: 310 LAVSNVEYIACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 367

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +    A   S   +++ G G  G LGHG R    +P+ +E   L   + 
Sbjct: 368 LQVLSVACGSWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRA 422

Query: 262 VVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A +              ++ TWG G    LGHG++E + VP  VQAL D 
Sbjct: 423 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 482

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  ++  G V++ G   +  LG N  ADG+         P +V   K  
Sbjct: 483 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLG 532

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           NE V +IS  ++     H  ALT   ++Y +G G  G+LG
Sbjct: 533 NELVEEISCGSN-----HVAALTSRSEVYTWGMGANGRLG 567



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+  VT+ G +Y +G  S  +G LGHGT    W P+ +   L+G++++  
Sbjct: 314 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 373

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G+  + L   +G+++ FG  +FG   +G + +  V  P+ VE+L     ++ A G + 
Sbjct: 374 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 431

Query: 161 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           +A +          +   +++T+  G+  RLGH  +   + P   +  L +    Q+A G
Sbjct: 432 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 490

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           +   +ALA   +   V+++G    G+LG+  + D K P ++ Q +L N     ++ G+ H
Sbjct: 491 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 545

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            A +     V TWG G  G LGHG+ E +  P +V AL D     ++ G ++TT +
Sbjct: 546 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 601



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 43/322 (13%)

Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           I   G VY +G+       S G + Y    T  +  P+ +ES   + V Q A G+    +
Sbjct: 217 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 275

Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            +R+G V+T  WG +   RLGH T+ +   P  L+ +L    V  IA G  +   +    
Sbjct: 276 TTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVESLAVSNVEYIACGEFHTCVVTA-- 330

Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G G    G LGHG+      P+ +    L  LQ + VA G+WH+A+    G+
Sbjct: 331 SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 388

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 329
           + T+G G +G LGHG+ E  + PK V+AL+  +A+ VA G + +  + E           
Sbjct: 389 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 448

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
             ++++G G+   LGH       G++ A  L P  V +L  V+    Q++  +S+     
Sbjct: 449 RKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQAL--VDHNFHQVACGHSM----- 493

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T AL  SG ++  G+ + GQLG
Sbjct: 494 TVALATSGHVFTMGSSNNGQLG 515


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 137/267 (51%), Gaps = 10/267 (3%)

Query: 32  RFLLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           R   AG +  RR    A++ G GH  AVT  G+VY++G    GQLGHG   ++  P+P+ 
Sbjct: 261 RVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP 320

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-- 148
            ++G  +   +AG   T+ ++  G ++ +G    G+  +     +L+  P LV +     
Sbjct: 321 RIKG-EVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLI--PTLVAAFIEWG 377

Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           + V  A  G   T VL+R G+V++F  G+  RLGH  + ND      L  LE+   V IA
Sbjct: 378 MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGND-NDQWSPTFLSALESERCVSIA 436

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
           AG+ + +AL  Q     +Y+ GCG  G+LGHGS +DE  PR +       ++ + VAAG 
Sbjct: 437 AGFAHSVALTDQGQ---IYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGE 493

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGN 295
            H  +   +G + T G   +G +  G+
Sbjct: 494 AHTCIFRSEGSLITLGRVSHGRMAEGS 520



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 15/210 (7%)

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L+ +     + G    A ++  G VYT+  G   +LGH  + + + P P       +P +
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQP-------VPRI 322

Query: 206 Q-----IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           +     ++AG+ + +A+       A+++ G G  GKLGH        P L+  F    + 
Sbjct: 323 KGEVKSVSAGFYHTVAVTHH---GALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMP 379

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
                AG  H  V+ + G+V ++G G  G LGHGN+  +  P  + AL   + + +A G 
Sbjct: 380 VAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGF 439

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
             +  +++ G +Y++GCG+   LGH + +D
Sbjct: 440 AHSVALTDQGQIYTWGCGKLGRLGHGSDSD 469



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 25/209 (11%)

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           +   AG+C     A   +G+ VY+ G G  G+LGHG   D+  P+ + +   +  +   V
Sbjct: 278 LSFGAGHC----AAVTDTGL-VYTWGQGRYGQLGHGDDVDKIIPQPVPR---IKGEVKSV 329

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYT 322
           +AG +H   V   G + TWG G+ G LGH +     +P +V A  +  +       G   
Sbjct: 330 SAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSH 389

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           T V++  G V+SFG G+S  LGH     G  N   +  +P  +++L+  +ER V I+   
Sbjct: 390 TLVLNRRGQVFSFGSGDSGRLGH-----GNDN---DQWSPTFLSALE--SERCVSIAAGF 439

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                AH+ ALT+ G++Y +G G  G+LG
Sbjct: 440 -----AHSVALTDQGQIYTWGCGKLGRLG 463



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 19/164 (11%)

Query: 259 LQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAI 314
           L+ VV +A   GA H A V   G V TWG GRYG LGHG++  + +P+ V  +  +VK+ 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKS- 328

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            V+ G Y T  V+  G ++++G G+   LGHN         +A  L P LV +  +    
Sbjct: 329 -VSAGFYHTVAVTHHGALFTWGDGKEGKLGHN--------DNAQRLIPTLVAAFIEWGMP 379

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           V       S     HT  L   G++++FG+GD G+LG    N+Q
Sbjct: 380 VAAAQAGGS-----HTLVLNRRGQVFSFGSGDSGRLGHGNDNDQ 418


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 173/374 (46%), Gaps = 34/374 (9%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 111
            H+  +T  G ++++G+N+SGQLGHG    + +  P+R  SL+   I+  + G   T++I 
Sbjct: 1205 HAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVID 1264

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
             +  +Y++G   +G+  +GV     +  P+ +E      +   A G + T VL   G ++
Sbjct: 1265 RSFHIYSWGNGKYGQLGHGVSTPHNL--PKRIEEFAGQKISSIATGYWHTLVLRSGGDLF 1322

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGM 224
             F      +LG     ND++ H  + T  N   +  A     +  + C       + S  
Sbjct: 1323 AFGSNEHGQLGL----NDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHG 1378

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             VYS G    G+LGHGS    ++P+LI+  +  N++   +  G +H  V      V  WG
Sbjct: 1379 DVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIK--RITCGPYHTVVTTDLDSVYCWG 1436

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED-------GDVYSFGC 337
             G + CLG G+ + E VPK+V+   + +   V  G Y T  +++        G+VY  G 
Sbjct: 1437 QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGS 1496

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
             E   LG   I     +   +   P ++ S+   N     + L +   +NA    +T +G
Sbjct: 1497 SEHGKLG---IGGDPRSPSLDKAYPAIIPSINSANV----VDLASGAEFNA---LITSNG 1546

Query: 398  KLYAFGAGDKGQLG 411
             LY +GAG  GQ+G
Sbjct: 1547 ALYMWGAGTHGQIG 1560



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 33/311 (10%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--------SLQGIRI 97
            S    G  H++ + S G +++FGSN  GQLG    +    P P R        + Q  R+
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHL-PIPTRVNTADIHHAGQPTRV 1361

Query: 98   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
                 G   ++L +  G VY+FG ++ G+  +G   T+    P+L++ LK   + +   G
Sbjct: 1362 TGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHG--STESCRYPKLIQGLKGKNIKRITCG 1419

Query: 158  NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
             + T V +    VY +  G    LG  +  N++ P  L+    N  V ++  G  Y  A 
Sbjct: 1420 PYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPK-LVELFVNKRVERVVCG-LYHTAT 1477

Query: 218  ACQPSGMA-----VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAG 267
              QP G +     VY  G    GKLG G        D+ +P +I      N+  V +A+G
Sbjct: 1478 LTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANV--VDLASG 1535

Query: 268  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            A   A++  +G +  WG G +G +G+G  +   +P  V +L+  K       +   F+V 
Sbjct: 1536 AEFNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV-SLSSEK-------NQNQFIVD 1587

Query: 328  EDGDVYSFGCG 338
            E G   +    
Sbjct: 1588 ESGSTITLSSS 1598



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 167/392 (42%), Gaps = 34/392 (8%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H++ +     +YS+G+   GQLGHG +     P+ I    G +I   A G   T+++   
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSG 1318

Query: 114  GQVYAFGKDSFG-----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            G ++AFG +  G     + ++ +     V +  +  + +   V     G+  + + +  G
Sbjct: 1319 GDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHG 1378

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             VY+F      +LGH +  +   P  + G L+   + +I  G  + +      S   VY 
Sbjct: 1379 DVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITCGPYHTVVTTDLDS---VYC 1434

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-------GRVC 281
             G G    LG GS  +E  P+L+E F  +N +   V  G +H A + Q        G V 
Sbjct: 1435 WGQGEHMCLGTGSNKNELVPKLVELF--VNKRVERVVCGLYHTATLTQPMGDSNTGGNVY 1492

Query: 282  TWGWGRYGCLGHGNEE-----CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
              G   +G LG G +       ++ P ++ ++N    + +A+G     +++ +G +Y +G
Sbjct: 1493 ICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWG 1552

Query: 337  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ-----ISLTNSIYWNAHTF 391
             G      H  I +G+ N+   + T   ++S K  N+ +V      I+L++S+       
Sbjct: 1553 AGT-----HGQIGNGK-NQDTWIPTRVSLSSEKNQNQFIVDESGSTITLSSSMLLTEKNN 1606

Query: 392  ALTESGKLYAFGAGDKGQLGIELVNNQTERGN 423
              T+ G          G     ++N   + GN
Sbjct: 1607 RYTQEGLEETLRKNANGYRPFVVINKAKQFGN 1638



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 19/152 (12%)

Query: 264  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDY 321
            V+ G  HAAV+  DG + TWG    G LGHG    + +S P  V++L     + ++ G  
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258

Query: 322  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ-ISL 380
             T V+     +YS+G G+   LGH             V TP  +   K++ E   Q IS 
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLGH------------GVSTPHNLP--KRIEEFAGQKISS 1304

Query: 381  TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              + YW  HT  L   G L+AFG+ + GQLG+
Sbjct: 1305 IATGYW--HTLVLRSGGDLFAFGSNEHGQLGL 1334



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 302  PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
            P      N+  A  V+ G     V++ DG+++++G   S  LGH  +A G   +H +  T
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGH-GLAAG---KHQS--T 1238

Query: 362  PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P  V SLKQ    ++ +SL        HT  +  S  +Y++G G  GQLG
Sbjct: 1239 PMRVESLKQT--PIMMMSLGGE-----HTVVIDRSFHIYSWGNGKYGQLG 1281


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  121 bits (304), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 30/312 (9%)

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 154
            R I+ + G     LIS++G+++ +GK+  G+  +G+   K+ T+P+ +E  +    ++  
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278

Query: 155  AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
              G   +  +  +  VY  SWG D   +LGH T+        ++  +    +  IAAG+ 
Sbjct: 1279 ECGGEHSICVDSDYVVY--SWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336

Query: 213  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAG 267
            + + L  + SG  +YS G G  G+LGHGS   +  P  IE   ++ +Q        +A G
Sbjct: 1337 HTIVL--KKSG-ELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACG 1393

Query: 268  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              H+ +   +G V +WG G+ G LGHGN E  + P++++AL  V  I  + G + T   +
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATT 1451

Query: 328  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
            +  +VYS+G GE   LGH +          N  TP++V    Q N   +   L       
Sbjct: 1452 DLKNVYSWGLGEHMKLGHGS--------DKNEATPRVVDFFIQKNVSKIVCGLN------ 1497

Query: 388  AHTFALTESGKL 399
             HT  LT  G L
Sbjct: 1498 -HTITLTYPGDL 1508



 Score =  120 bits (300), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 185/421 (43%), Gaps = 76/421 (18%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGR 106
            G  H   ++  G ++++G N SGQLGHG    + +  P R L+  R    II    G   
Sbjct: 1226 GWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKR-LEFFRGKSPIIMVECGGEH 1284

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVL 164
            ++ +     VY++G+D FG+  +   GTK V+   P+++E +    +   A G   T VL
Sbjct: 1285 SICVDSDYVVYSWGQDKFGQLGH---GTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVL 1341

Query: 165  SREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALA 218
             + G +Y+F +G+  +LGH      + P  +E + ++G       + QIA G+ +  ++ 
Sbjct: 1342 KKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGH--SVI 1399

Query: 219  CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            C  +G  VYS G G  G+LGHG+      PRLIE  + +      ++ G ++        
Sbjct: 1400 CSDNG-EVYSWGLGKQGQLGHGNYESIARPRLIEALKGV----TKISCGHFYTMATTDLK 1454

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAI-----HVAT----GDYTTFVVS 327
             V +WG G +  LGHG+++ E+ P+VV      +V  I     H  T    GD     +S
Sbjct: 1455 NVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLS 1514

Query: 328  EDGDVYSF--------------------GCGESASLGHN---------AIADGQ------ 352
             D DV  F                      G S  LG N         A   G+      
Sbjct: 1515 NDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGL 1574

Query: 353  -GNRHANVLTPQLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
             G+  +      + T++K VN   ++ IS          T  +T +G LY +G G+ GQ+
Sbjct: 1575 GGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDF-----TAMITSNGALYVWGYGNFGQI 1629

Query: 411  G 411
            G
Sbjct: 1630 G 1630



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 79/274 (28%), Positives = 119/274 (43%), Gaps = 17/274 (6%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            +Q   G GHS+  +  G VYS+G    GQLGHG  E   RPR I +L+G+  I  + G  
Sbjct: 1388 TQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHF 1445

Query: 106  RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             TM  +D   VY++G    GE  + G    K   +P++V+      V +   G   T  L
Sbjct: 1446 YTMATTDLKNVYSWG---LGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITL 1502

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +  G +   S  ND  +       D+ P     +  +        G    L L       
Sbjct: 1503 TYPGDLNNNSLSNDDDVNDFI---DLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVS 1559

Query: 225  AVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             +Y+ G G  GKLG G        D+  P  I+    LNL  + ++ G    A++  +G 
Sbjct: 1560 PIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNL--IDISCGTDFTAMITSNGA 1617

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            +  WG+G +G +G+G  +   VP  +  L D KA
Sbjct: 1618 LYVWGYGNFGQIGNGKTDDAWVPIRI-PLTDSKA 1650



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 52/333 (15%)

Query: 47   QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGI-----RII 98
            QAIA G  H+I +   G +YSFG    GQLGHG+   +  P  I   ++ GI     +I 
Sbjct: 1329 QAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKIT 1388

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            Q A G G +++ SD G+VY++G    G+  +G    + +  P+L+E+LK   V + + G+
Sbjct: 1389 QIACGFGHSVICSDNGEVYSWGLGKQGQLGHG--NYESIARPRLIEALKG--VTKISCGH 1444

Query: 159  FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
            F+T   +    VY++  G   +LGH ++ N+  P  +   ++   V +I  G  + + L 
Sbjct: 1445 FYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQK-NVSKIVCGLNHTITLT 1503

Query: 219  CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----VVVAAGAWHAAVV 274
                            G L + S +++     +  F  ++L P       ++   +    
Sbjct: 1504 --------------YPGDLNNNSLSNDDD---VNDF--IDLAPSTSNSSSSSSLTNDNNN 1544

Query: 275  GQDGR-----------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHVAT 318
            G+ GR           +   G G +G LG G +       + +P  ++ +N +  I ++ 
Sbjct: 1545 GRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISC 1604

Query: 319  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G   T +++ +G +Y +G G    +G+    D 
Sbjct: 1605 GTDFTAMITSNGALYVWGYGNFGQIGNGKTDDA 1637



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 260  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAI-HV 316
            + + V+ G  H A++ + G + TWG  + G LGHG +  + ++ PK ++       I  V
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278

Query: 317  ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
              G   +  V  D  VYS+G  +   LGH   +  Q NR      P+++  +     + +
Sbjct: 1279 ECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NR------PKIIEDISGQKIQAI 1331

Query: 377  QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                       AHT  L +SG+LY+FG GD+GQLG
Sbjct: 1332 AAGF-------AHTIVLKKSGELYSFGYGDQGQLG 1359


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 177/353 (50%), Gaps = 28/353 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N  GQLG     +   P  ++++  +R +  A G+    +++  G+VY  G+ +
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGA 2930

Query: 124  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
             G    G+  T+ ++ P  +++L   FV +  +  G   +  ++REG+V+++  G D +L
Sbjct: 2931 NGR--LGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988

Query: 182  GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
            GH    + + P  L+  LE+  +V+IA G  +  A+        +Y+ G G  G+LGHG 
Sbjct: 2989 GHGDVTSRLSP-TLIEALESKLIVEIACGSSHSAAVTADGE---LYTWGLGDYGRLGHGD 3044

Query: 242  RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECE 299
                  P+ ++  Q  + + + +A G+  A  +      C W WG   +G LG G  E  
Sbjct: 3045 SKTLHIPKQVKALQ--DYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGC 3102

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            ++P+ + AL       +A G   +  +S  G V+++G G+   LGH       GN  ++ 
Sbjct: 3103 NIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGH-------GN-DSHY 3154

Query: 360  LTPQLVT-SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +PQL+   LK+  +R+ +I++        H  A+T++G++Y++G  D GQ G
Sbjct: 3155 RSPQLIEGPLKK--KRITEIAVG-----ALHCLAVTDTGEVYSWGDNDHGQQG 3200



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 153/314 (48%), Gaps = 41/314 (13%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           I Q    +   + +++ G+VY+   ++  EA            P L++SL +I + + A 
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEA------------PVLLDSLIDIKIKKIAA 518

Query: 157 ---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYC 212
              G  + A LS +G VY++  G+  RLGH     D+   P L+  L N  + QIA G  
Sbjct: 519 NVEGEHYLA-LSSDGCVYSWGSGDGGRLGH----GDIRREPELVKELVNKKITQIACGST 573

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           Y  A+    S   +Y+ G G  G+LGHG+  D   P L+      ++  V   +G  H  
Sbjct: 574 YSAAVT---SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTL 630

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDG 330
            + +DG V +WG G YG LG G  +C  VPKVV+ L  ++   ++V  G   +  + +DG
Sbjct: 631 AIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDG 690

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            V+++G  +   LGH  +         +V  P++V  L  +N  +V I++  S     H 
Sbjct: 691 TVWTWGKSDGYRLGHGTL--------DHVRYPKMVEGL--INYHIVDIAVGPS-----HC 735

Query: 391 FALTESGKLYAFGA 404
            ALT++ +++ +G+
Sbjct: 736 LALTDNCQIFTWGS 749



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 10/293 (3%)

Query: 48   AIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 104
            +IAG   ++  VT  G VY  G  ++G+LG G TE    P  + +L    ++ +    G 
Sbjct: 2906 SIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGG 2965

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              ++ I+  G+V+++G+   G+  +G   ++L  SP L+E+L++  +V+ A G+  +A +
Sbjct: 2966 RHSLCITREGKVFSWGEGIDGKLGHGDVTSRL--SPTLIEALESKLIVEIACGSSHSAAV 3023

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            + +G +YT+  G+  RLGH        P   +  L++  V+ IA G      LA   +  
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDSKTLHIPKQ-VKALQDYKVIDIACGSRDAQTLALTDNN- 3081

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G       P+ I+   L       +A GA  +  +   G+V TWG
Sbjct: 3082 CVWSWGDGDFGKLGRGGSEGCNIPQKID--ALCGRDVCRIACGAQFSLALSTTGKVWTWG 3139

Query: 285  WGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             G Y  LGHGN+     P++++  L   +   +A G      V++ G+VYS+G
Sbjct: 3140 KGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWG 3192



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 12/286 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++ +TS   V+S+G    G+LGHG       PR I +L G +I+  + G+  +  
Sbjct: 3864 SGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAA 3923

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            I+  G++Y +GK  +G   +G     L   P+L+E+LK+  V+  A G+     L+    
Sbjct: 3924 ITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYKVIDVACGSGDAQTLAITDD 3981

Query: 170  VYTFSWGND--ARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
               +SWG+    +LG     +D    PL + +L  + V ++  G  + +AL        +
Sbjct: 3982 DCVWSWGDGDYGKLGRGG--SDGCKKPLRIESLIGMAVCKVECGSQFSVALT---KNGDL 4036

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            Y+ G G   +LGHG+    + PR +   Q    Q V VAAG+ H       G V TWG  
Sbjct: 4037 YTWGKGDYYRLGHGTNDHVRRPRKVACLQ--GKQIVTVAAGSLHCVACTDAGEVFTWGDN 4094

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
              G LG+G       P +V  L +VK   V  G   +F  S +  +
Sbjct: 4095 DEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPI 4140



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 23/349 (6%)

Query: 65   YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
            Y +G N  GQLG     +   P     +  +R    A G     +++  G+VYA G    
Sbjct: 3773 YVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLGGS 3832

Query: 125  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLG 182
            G    G      + +P ++E L+++ + + ++  G     VL+    V+++  G D +LG
Sbjct: 3833 GRLGIGRSDN--IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890

Query: 183  HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
            H  + +   P  +   L    +V I+ G  +  A+    S   +Y+ G G  G+LGHG  
Sbjct: 3891 HGDKLSSETPRKIEALLGK-QIVHISCGSSHSAAIT---SKGELYTWGKGRYGRLGHGDG 3946

Query: 243  TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             D   P+L+E  +   +  V   +G      +  D  V +WG G YG LG G  +    P
Sbjct: 3947 DDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKP 4006

Query: 303  KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
              +++L  +    V  G   +  ++++GD+Y++G G+   LGH        N H  V  P
Sbjct: 4007 LRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGT------NDH--VRRP 4058

Query: 363  QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            + V  L+   +++V ++       + H  A T++G+++ +G  D+GQLG
Sbjct: 4059 RKVACLQ--GKQIVTVAAG-----SLHCVACTDAGEVFTWGDNDEGQLG 4100



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 12/273 (4%)

Query: 52   PG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            PG  HS+ +T +G V+S+G    G+LGHG       P  I +L+   I++ A G+  +  
Sbjct: 2963 PGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAA 3022

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            ++  G++Y +G   +G   +G   +K +  P+ V++L++  V+  A G+     L+    
Sbjct: 3023 VTADGELYTWGLGDYGRLGHG--DSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDN 3080

Query: 170  VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
               +SWG+    +LG         P   +  L    V +IA G  + LAL+   +   V+
Sbjct: 3081 NCVWSWGDGDFGKLGRGGSEGCNIPQK-IDALCGRDVCRIACGAQFSLALS---TTGKVW 3136

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+ +  + P+LIE   L   +   +A GA H   V   G V +WG   
Sbjct: 3137 TWGKGDYYRLGHGNDSHYRSPQLIEG-PLKKKRITEIAVGALHCLAVTDTGEVYSWGDND 3195

Query: 288  YGCLGHGNEECESVPKV-VQALNDVKAIHVATG 319
            +G  G+GN      P++ +  L+ VK  H+A G
Sbjct: 3196 HGQQGNGNTTVNKRPQICLGELDGVKISHIACG 3228



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 164/344 (47%), Gaps = 17/344 (4%)

Query: 48   AIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGA 104
            A+AG   ++ + TS+G VY+ G   SG+LG G ++    P  I  LQ ++I  +   +G 
Sbjct: 3807 AVAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGG 3866

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               M+++   +V+++G    G+  +G + +    +P+ +E+L    +V  + G+  +A +
Sbjct: 3867 RHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAI 3924

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            + +G +YT+  G   RLGH    + ++P  LL  L++  V+ +A G      LA      
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGDDCLKPK-LLEALKSYKVIDVACGSGDAQTLAITDDD- 3982

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             V+S G G  GKLG G     K P  IE   L+ +    V  G+  +  + ++G + TWG
Sbjct: 3983 CVWSWGDGDYGKLGRGGSDGCKKPLRIE--SLIGMAVCKVECGSQFSVALTKNGDLYTWG 4040

Query: 285  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G Y  LGHG  +    P+ V  L   + + VA G       ++ G+V+++G  +   LG
Sbjct: 4041 KGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLG 4100

Query: 345  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            +  +          +  P LVT L+ V    V     +S  W+ 
Sbjct: 4101 NGTLNP--------IPEPTLVTVLENVKLNRVGCGSAHSFAWST 4136



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 19/285 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A++S G VYS+GS   G+LGHG    E  P  ++ L   +I Q A G+  +  ++  
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVTSN 581

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G++Y +G+ S+G   +G    +L+  P LV  L    VV  A   G+  T  + ++G V+
Sbjct: 582 GELYTWGRGSYGRLGHGNSEDRLL--PTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVW 639

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLE--NIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           ++  G+  +LG         P  ++ TL+  N  +V +  G  + +AL        V++ 
Sbjct: 640 SWGDGDYGKLGRGGSDCCKVPK-VVETLKHHNKYIVNVLCGSQFSVALG---KDGTVWTW 695

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG--R 287
           G   G +LGHG+    ++P+++E   L+N   V +A G  H   +  + ++ TWG    +
Sbjct: 696 GKSDGYRLGHGTLDHVRYPKMVE--GLINYHIVDIAVGPSHCLALTDNCQIFTWGSDVQK 753

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
           Y  L   N   E  P  + A+N      VA G    F+ +  G +
Sbjct: 754 YA-LSSDNYNME--PTCISAINKEFIAGVACGPAQNFLWTSGGKL 795



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  +S AVTS G +Y++G  S G+LGHG +E+   P  +  L G  ++  A G+G
Sbjct: 566 TQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSG 625

Query: 106 --RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFT 161
              T+ I   G V+++G   +G+   G  G+     P++VE+LK  N ++V    G+ F+
Sbjct: 626 DAHTLAIDKDGIVWSWGDGDYGKLGRG--GSDCCKVPKVVETLKHHNKYIVNVLCGSQFS 683

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA--C 219
             L ++G V+T+   +  RLGH T  +   P  + G L N  +V IA G  + LAL   C
Sbjct: 684 VALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEG-LINYHIVDIAVGPSHCLALTDNC 742

Query: 220 Q 220
           Q
Sbjct: 743 Q 743



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 18/156 (11%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G A C+ E      G   S+A+T  G +Y++G     +LGHGT +   RPR +  LQG
Sbjct: 4012 LIGMAVCKVE-----CGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQG 4066

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  AAG+   +  +DAG+V+ +G +  G+   G      +  P LV  L+N+ + + 
Sbjct: 4067 KQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNP--IPEPTLVTVLENVKLNRV 4124

Query: 155  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
              G+            ++F+W  +A +     PN +
Sbjct: 4125 GCGS-----------AHSFAWSTEAPIDIGYMPNQI 4149



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 31/237 (13%)

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           WGN   LG  +    ++   +  T+  + + QI      ++AL    +   VYS      
Sbjct: 445 WGNINWLGGESNDGSLK---IYETVAELGIKQIMCSSDNIIALT---NNGRVYS------ 492

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
             L + +R +   P L++    + ++ +       H   +  DG V +WG G  G LGHG
Sbjct: 493 --LAYNARCEA--PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHG 548

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           +   E  P++V+ L + K   +A G   +  V+ +G++Y++G G    LGH       GN
Sbjct: 549 DIRRE--PELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGH-------GN 599

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +L P LV  L      VV ++  +    +AHT A+ + G ++++G GD G+LG
Sbjct: 600 SEDRLL-PTLVAGLS--GSHVVDVACGSG---DAHTLAIDKDGIVWSWGDGDYGKLG 650



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 57/221 (25%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
            G  HS AVT+ G +Y++G    G+LGHG ++    P+ +++LQ  ++I  A G+   +T+
Sbjct: 3016 GSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTL 3075

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             ++D   V+++G   FG+   G  G++    PQ +++L    V + A G  F+  LS  G
Sbjct: 3076 ALTDNNCVWSWGDGDFGKLGRG--GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTG 3133

Query: 169  RVYTFSWGNDARLGH-----HTEPNDVE-------------------------------- 191
            +V+T+  G+  RLGH     +  P  +E                                
Sbjct: 3134 KVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGD 3193

Query: 192  ----------------PHPLLGTLENIPVVQIAAGYCYLLA 216
                            P   LG L+ + +  IA G  + +A
Sbjct: 3194 NDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIA 3234



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 96
            +A C R+  +   G   S+A+++ G V+++G     +LGHG       P+ I   L+  R
Sbjct: 3109 DALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKR 3168

Query: 97   IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
            I + A GA   + ++D G+VY++G +  G+   G   T +   PQ+
Sbjct: 3169 ITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG--NTTVNKRPQI 3212



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 6/117 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
             + G   S+A+   G V+++G +   +LGHGT +    P+ +  L    I+  A G   
Sbjct: 675 NVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSH 734

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFF 160
            + ++D  Q++ +G D     +Y +        P  + ++   F+   A G   NF 
Sbjct: 735 CLALTDNCQIFTWGSDV---QKYALSSDNYNMEPTCISAINKEFIAGVACGPAQNFL 788



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 13/135 (9%)

Query: 277  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            D RV  WG    G LG         P  ++ +  ++ + +A G  T F+V+ DG VY  G
Sbjct: 2868 DSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927

Query: 337  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             G +  L       G GN   N+  P  + +L     + V +          H+  +T  
Sbjct: 2928 EGANGRL-------GLGNTE-NISIPVQLDTLNMHFVKKVTVHPGGR-----HSLCITRE 2974

Query: 397  GKLYAFGAGDKGQLG 411
            GK++++G G  G+LG
Sbjct: 2975 GKVFSWGEGIDGKLG 2989



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 42   RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQA 100
            ++  ++   G  H +AVT  G VYS+G N  GQ G+G T    RP+  +  L G++I   
Sbjct: 3166 KKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHI 3225

Query: 101  AAGAGRTM 108
            A G+  ++
Sbjct: 3226 ACGSSHSI 3233


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 152/293 (51%), Gaps = 23/293 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGR 106
            G  H+ AVT+ G +Y++G  +++ G LGHG     W P+ I  +L+G+ +   + G   
Sbjct: 136 CGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWH 195

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-- 164
           T LI+  GQ++ FG  +FG   +G +  + ++ P+ VESL  +  +  A G + TA +  
Sbjct: 196 TALITTMGQLFTFGDGTFGVLGHGNR--ESISCPKEVESLSGLKTISVACGVWHTAAIVE 253

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   ++P   + +L +    +IA G+   +
Sbjct: 254 VIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFHRIACGHSLTV 312

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L    +   V S+G  + G+LG+  R+D K P L+E+    N+  V VA G++H AV+ 
Sbjct: 313 GLT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV--VQVACGSYHVAVLT 366

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
               V TWG G  G LGHG+ E   +P +V+AL D    H+A G   T  + +
Sbjct: 367 IKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQ 419



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 36/340 (10%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           RP+P+ S   +       G   + L++  G+V+ +G++S G   +G +   +   P+L+E
Sbjct: 67  RPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIE 124

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
           SL    V   A G F T  ++  G +YT+  G  N   LGH  + +   P  + G LE +
Sbjct: 125 SLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGL 184

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V  ++ G  +   +        +++ G G  G LGHG+R     P+ +E   L  L+ +
Sbjct: 185 AVAYVSCGTWHTALITTMGQ---LFTFGDGTFGVLGHGNRESISCPKEVE--SLSGLKTI 239

Query: 263 VVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D 
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               +A G   T  ++  G V S G         N +    GN  ++   P LV  +  V
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMG---------NTVYGQLGNPRSDGKIPCLVEEI--V 348

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 349 GENVVQVACG-----SYHVAVLTIKSEVFTWGKGANGRLG 383



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 33/288 (11%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P+ +ES   +       G   +A++++ G V+T+   +  RLGH +  + +  HP L
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
             +E++ V  +    C         +   +Y+ G G    G LGHG       P+ I   
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG- 179

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  L    V+ G WH A++   G++ T+G G +G LGHGN E  S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239

Query: 315 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            VA G + T  + E            G ++++G G+   LGH       G++    L P 
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH-------GDKEPR-LKPT 291

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V SL  ++    +I+  +S+     T  LT SGK+ + G    GQLG
Sbjct: 292 CVASL--IDYDFHRIACGHSL-----TVGLTTSGKVLSMGNTVYGQLG 332


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 34/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS S GQLG G  E+E    P  I       + Q A G   T+ ++  G+VYA G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGS 66

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           +   +  + +   +    P L+  L++  ++Q + G+  +  LS  G+V   SWG++   
Sbjct: 67  NDHSQLGHDLPTKR----PLLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH T+   ++   ++  L +  VVQIA G  + LAL    S   +YS G  + G+LG 
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177

Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
            S  D  H    +    LL +    +A G  H+ ++ + G V  +GWGR  C  LG  +E
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH           
Sbjct: 236 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           +N + P++V  L  +   + Q++  N      HT AL  S G++YAFG G  GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 21/306 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP  I  LQ   IIQ + G+  
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTK--RPLLIPELQDYVIIQISCGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +SD GQV ++G +  G+  +     +++  P++V  L +  VVQ A GN  +  L+ 
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
            G +Y  SWG++   +LG ++ P D+    +PL L TL  IP+  IA G  + +L++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G 
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330

Query: 339 ESASLG 344
            S  LG
Sbjct: 331 SSGQLG 336



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLGH T +E  + P+ +R L    ++Q A G  
Sbjct: 94  QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV   K +T    P  + +L  I +   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+ G V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  +  
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GRV 
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +   +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++  G V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GRVY F  G+  +LG  +  + + P  ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y  G    G+LG G   DE+   P  I       ++ V  A G  H   +  +G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQV--ACGHRHTLFLTANGK 60

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   +  LGH  +     P ++  L D   I ++ G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH             +  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIMQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG+    + T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPKDLTHCNYPLRL 192


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 24/298 (8%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
           N++ +A G  H+ AVT  G +Y++G++  S G +GH      W P+ + S L+G+RI   
Sbjct: 333 NTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSI 392

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A GA  T L+S AGQ++ FG  +FG   +G +  + +  P+ VESLK +  V+AA G + 
Sbjct: 393 ACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKTVRAACGIWH 450

Query: 161 TAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           TA +               G+++T+  G+  RLGH  +   + P   +  L +    Q+A
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPT-CVAALVDYNFRQVA 509

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G+   +AL    SG  V+++G  + G+LG+  + D K P +++  +L       +  GA
Sbjct: 510 CGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELARTFVEEIGCGA 564

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            H A +     + TWG G  G LGHG+ E  + P +V+AL D +   VA G   T V+
Sbjct: 565 HHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVI 622



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 42/361 (11%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G G+  +   P+ +++   + +   A G+    L++  G V+ +G++  G   +G+    
Sbjct: 261 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD- 319

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 191
            V+ PQLV++L  +     A G+F T  ++  G +YT  WG DA+    +GH    +   
Sbjct: 320 -VSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYT--WGADAQSGGLVGHSNPVSHWM 376

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           P  +   LE + +  IA G  +   ++   S   +++ G G  G LGHG + +   P+ +
Sbjct: 377 PKRMSSPLEGVRISSIACGAWHTALVS---SAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 433

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 299
           E  +   L+ V  A G WH A V +             G++ TWG G    LGHG++E +
Sbjct: 434 ESLK--GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQK 491

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  V AL D     VA G   T  ++  G V++ G      LG N  ADG+       
Sbjct: 492 LVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG-NPKADGK------- 543

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             P +V       +  +  +    I   AH   AL+   ++Y +G G  G+LG   V ++
Sbjct: 544 -VPGMV-------DGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDR 595

Query: 419 T 419
           T
Sbjct: 596 T 596



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 38/307 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
           P+ +++   + V   A G+   A+++++G V  F WG +   RLGH  + +  EP  L+ 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 327

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L  +    +A G  +  A+      +  +      GG +GH +      P+ +    L 
Sbjct: 328 ALAGVNTELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 385

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            ++   +A GAWH A+V   G++ T+G G +G LGHG++   ++PK V++L  +K +  A
Sbjct: 386 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 445

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 446 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH-------GDKEQK-LVPTCV 497

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L   N R  Q++  +S+     T ALT SG+++  G+   GQLG    N + +   P 
Sbjct: 498 AALVDYNFR--QVACGHSL-----TVALTTSGRVFTMGSTIYGQLG----NPKADGKVPG 546

Query: 426 RVDIDLS 432
            VD +L+
Sbjct: 547 MVDGELA 553


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G  + G+   G+ GT+  T  P+ ++SL ++ +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGFAADGQL--GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   +        L+ +L  IP  QIAAG  +  AL    SG AV+
Sbjct: 158 V--FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL--SG-AVF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V ++ G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 30/357 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR         +     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY + +  D +LG  
Sbjct: 64  GQLGH----EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLP 119

Query: 185 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SR 242
            TE     P  +  +L ++ +VQ+A GY + LAL+    G  V+S G    G+LG G   
Sbjct: 120 GTEEYTRVPRNI-KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDL 175

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             +  P+LI+   LL +    +AAG  H+  +   G V  WG  ++G LG  +E    VP
Sbjct: 176 KKQTSPQLIKS--LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVP 233

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            ++++L   K ++++ G+  T  ++++G V++FG G    LGHN+       R    L  
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMG 293

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 418
            +VT          QI+         HT A   S G++Y+FG G  GQLG+   +N+
Sbjct: 294 NIVT----------QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 136/260 (52%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++ +  KG VY++G  + GQLG   TEE  R PR I+SL  ++I+Q A G   ++ 
Sbjct: 92  GEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G    K  TSPQL++SL  I   Q A G   +  L+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGYD-LKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG +   +LG + E +   P+ LL +L +  +V I+ G  +  AL  +     V+
Sbjct: 211 V--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYISCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S   E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGMGSTSNRKSPFPVK 342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P+ I+SL GI   Q AAG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G V+ +G++ FG+     +  + V  P L++SL++  +V  + G   TA L+
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + NI V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSP 338



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 3/154 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS A+T  G V+ +G N  GQLG     + + P  ++SL+  +I+  + G   
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+  +   G ++  +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVFELMGNIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
             GR+Y+F  G + +LG  +  N   P P+ G  
Sbjct: 312 STGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 20/311 (6%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           C  E S A+AG            VYS+G    G+LG G  ++ + P P+ +L G R+   
Sbjct: 69  CGAEYSMAVAG--------GDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASV 120

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   T++ +  GQ++AFG++  G+   G+   +    PQLV +L+   VV  A G   
Sbjct: 121 ACGDTHTLVATAEGQLFAFGRNQNGQC--GLGSIQDCLEPQLVTALQGKEVVAVACGAEH 178

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +  ++ EG VY + WG    +G   E  D     L   LE + V Q+  G+ + +A+   
Sbjct: 179 SMCVTSEGEVYCWGWGRYGNIG-DGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAV--- 234

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGR 279
             G A+Y+ G G   +L  G R D   P+ +E      +Q V   AG W H       GR
Sbjct: 235 DEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEA-----VQQVATVAGGWRHTMAADSQGR 289

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           +   GW ++G  G G+ E     + V+AL   + + V +G   T  V+  G  +S+G   
Sbjct: 290 LFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNV 349

Query: 340 SASLGHNAIAD 350
           +  LGH+ + D
Sbjct: 350 NGQLGHSGMQD 360



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 165/367 (44%), Gaps = 33/367 (8%)

Query: 51  GPGHSIAVTSK---GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           G  HS+A+ S     +V S+G    GQLGHG  E+   P+ + SL          GA  +
Sbjct: 15  GSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYS 74

Query: 108 MLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           M ++    QVY++G   FG    G    K V  P  + +L    V   A G+  T V + 
Sbjct: 75  MAVAGGDKQVYSWGWGDFG--RLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATA 132

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           EG+++ F    + + G  +  + +EP  L+  L+   VV +A G  + +   C  S   V
Sbjct: 133 EGQLFAFGRNQNGQCGLGSIQDCLEPQ-LVTALQGKEVVAVACGAEHSM---CVTSEGEV 188

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y  G G  G +G G   D   P L +  + + +    V  G  H+  V + G + TWGWG
Sbjct: 189 YCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKV--AQVNCGWRHSIAVDEGGAMYTWGWG 246

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE--SASLG 344
            Y  L  G+ +   VPK V+A+  V    VA G   T      G +++ G  +     +G
Sbjct: 247 AYAQLMQGDRKDHYVPKRVEAVQQVAT--VAGGWRHTMAADSQGRLFASGWNKFGQCGVG 304

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           HN           +V+  Q V +L    ERVVQ+       W  HT A+T +GK +++G 
Sbjct: 305 HN----------EDVVRVQQVEAL--AGERVVQVKSG----WK-HTMAVTHTGKFFSWGR 347

Query: 405 GDKGQLG 411
              GQLG
Sbjct: 348 NVNGQLG 354



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 143/320 (44%), Gaps = 29/320 (9%)

Query: 97  IIQAAAGAGRTM-LIS--DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           +I  A G+  ++ LIS      V ++G+   G+  +G    +    PQ V SL +     
Sbjct: 9   VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDR--QEPQAVFSLLHRGATS 66

Query: 154 AAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
              G  +  AV   + +VY++ WG+  RLG     +   P PL   L    V  +A G  
Sbjct: 67  VHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLP-ALAGRRVASVACGDT 125

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           + L    +     +++ G    G+ G GS  D   P+L+   Q    + V VA GA H+ 
Sbjct: 126 HTLVATAEGQ---LFAFGRNQNGQCGLGSIQDCLEPQLVTALQ--GKEVVAVACGAEHSM 180

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            V  +G V  WGWGRYG +G G  +   +P + + L  VK   V  G   +  V E G +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           Y++G G  A L        QG+R  + + P+ V +++QV         T +  W  HT A
Sbjct: 241 YTWGWGAYAQL-------MQGDRKDHYV-PKRVEAVQQV--------ATVAGGWR-HTMA 283

Query: 393 LTESGKLYAFGAGDKGQLGI 412
               G+L+A G    GQ G+
Sbjct: 284 ADSQGRLFASGWNKFGQCGV 303



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 14/269 (5%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  +    G  H++  T++G +++FG N +GQ G G+ ++   P+ + +LQG  ++  A 
Sbjct: 115 RRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVAC 174

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           GA  +M ++  G+VY +G   +G    G    + +  P L + L+ + V Q   G   + 
Sbjct: 175 GAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHL--PTLAKGLEGVKVAQVNCGWRHSI 232

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQP 221
            +   G +YT+ WG  A+L       D + H +   +E +  V  +A G+ + +A   Q 
Sbjct: 233 AVDEGGAMYTWGWGAYAQLMQ----GDRKDHYVPKRVEAVQQVATVAGGWRHTMAADSQG 288

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRV 280
               +++ G    G+ G G   D      ++Q + L  + VV     W H   V   G+ 
Sbjct: 289 R---LFASGWNKFGQCGVGHNEDVVR---VQQVEALAGERVVQVKSGWKHTMAVTHTGKF 342

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN 309
            +WG    G LGH   +  + P  + AL+
Sbjct: 343 FSWGRNVNGQLGHSGMQDSNSPVELAALS 371



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 16/142 (11%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V +WG G  G LGHG+ E    P+ V +L    A  V  G +Y+  V   D  VYS+G G
Sbjct: 31  VLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWG 90

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
           +   LG   + D        V  P  + +L     RV  ++  ++     HT   T  G+
Sbjct: 91  DFGRLGTGDVKD--------VFIPCPLPAL--AGRRVASVACGDT-----HTLVATAEGQ 135

Query: 399 LYAFGAGDKGQLGIELVNNQTE 420
           L+AFG    GQ G+  + +  E
Sbjct: 136 LFAFGRNQNGQCGLGSIQDCLE 157


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 166/356 (46%), Gaps = 28/356 (7%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR        R+     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY +    D +LG  
Sbjct: 64  GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                V     + +L  I +VQ+A GY + LAL+    G  V+S G    G+LG G    
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176

Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           ++  P++I+   LL +    +AAG  H+ V+   G +  WG  ++G LG  ++    VP 
Sbjct: 177 KQTSPQMIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           ++++L   K +H+  G+  T  ++++G V++FG G    LGHN+ +     R    L   
Sbjct: 235 LLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 418
           +VT          QI+         HT A    SG++Y+FG G  GQLG    +N+
Sbjct: 295 VVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNR 335



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 21/301 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH    +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G  + G+   G+ GT + V  P+ + SL  I +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
           V  FSWG +   +LG   E        ++ +L  IP  QIAAG  + ++L L    SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL----SG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           ++  G    G+LG     D   P L++    L  Q VV +  G  H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRSQKVVHICCGEDHTAALTKEGGVFTFG 267

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 343
            G YG LGH +   E  P+ V  L       +  G  +TT  V   G +YSFG G +  L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327

Query: 344 G 344
           G
Sbjct: 328 G 328



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G  + GQLG   TEE  R PR IRSL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++ +G+   G +  K  TSPQ+++SL  I   Q A G   + VL+  G 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + + ND     LL +L +  VV I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +  G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G       P  V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P+ I+SL GI   Q AAG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+        + V  P L++SL++  VV    G   TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRSQKVVHICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + ++ V QI  G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSV-VTQITCGRQHTTAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 3/154 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +++    G  
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q   G    TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
              GR+Y+F  G + +LG  T  N   P  + G+
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGS 344


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  RP  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D GQVYA+G  + G+   G+ GT+  T  P+ ++SL ++ +VQ A G + +  LS+   
Sbjct: 100 NDKGQVYAWGFAADGQL--GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSE 157

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  FSWG +   +LG   +        L+ +L  IP  QIAAG  +  AL    SG AV+
Sbjct: 158 V--FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL--SG-AVF 212

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG     D   P L++   L + + V ++ G  H A + ++G V T+G G 
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T+  V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 30/357 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR         +     G   T+ + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+VY + +  D +LG  
Sbjct: 64  GQLGH----EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLP 119

Query: 185 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SR 242
            TE     P  +  +L ++ +VQ+A GY + LAL+    G  V+S G    G+LG G   
Sbjct: 120 GTEEYTRVPRNI-KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDL 175

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
             +  P+LI+   LL +    +AAG  H+  +   G V  WG  ++G LG  +E    VP
Sbjct: 176 KKQTSPQLIKS--LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVP 233

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            ++++L   K ++++ G+  T  ++++G V++FG G    LGHN+       R    L  
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMG 293

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 418
            +VT          QI+         HT A   S G++Y+FG G  GQLG+   +N+
Sbjct: 294 NIVT----------QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 136/260 (52%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++ +  KG VY++G  + GQLG   TEE  R PR I+SL  ++I+Q A G   ++ 
Sbjct: 92  GEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++  G+   G    K  TSPQL++SL  I   Q A G   +  L+  G 
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGYD-LKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG +   +LG + E +   P+ LL +L +  +V I+ G  +  AL  +     V+
Sbjct: 211 V--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYISCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S   E +PR +  F+L+      +A G  H +A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGMGSTSNRKSPFPVK 342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P+ I+SL GI   Q AAG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G V+ +G++ FG+     +  + V  P L++SL++  +V  + G   TA L+
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + NI V QIA G  +  A    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSP 338



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 3/154 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS A+T  G V+ +G N  GQLG     + + P  ++SL+  +I+  + G   
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+  +   G ++  +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVFELMGNIVTQIACGRQHTSAFVP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
             GR+Y+F  G + +LG  +  N   P P+ G  
Sbjct: 312 STGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 181/371 (48%), Gaps = 39/371 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAG 105
           A+  P H      K  ++ +GS   G+LG G  E+E    PR +   +   I Q A G  
Sbjct: 17  AVEYPLHK-----KKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T++I+  G++Y+ G + +G+  +     +L    QL+  L      +AA G + T  ++
Sbjct: 72  YTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAACGAYHTLAIN 127

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPS 222
             G++  FSWG++   +LG +++ N +E  P ++ TL    VVQIA G  +  AL    +
Sbjct: 128 EWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMKHAFALT---N 181

Query: 223 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              +YS G    G+LG G+ T  E  P+ I  F  + +    +A G +H+  + + G V 
Sbjct: 182 NGELYSWGSNSEGQLGLGTDTKYEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAVF 239

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG   +G LG  + +  ++P  +Q L + K  + A G+  +  ++ DG V++ G G   
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 400
            LGH +        ++N + P+ V  L  +   V QIS         HT AL  S G++Y
Sbjct: 300 QLGHGS--------NSNEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSRGRVY 344

Query: 401 AFGAGDKGQLG 411
           A+G G  GQLG
Sbjct: 345 AWGLGGAGQLG 355



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 159/325 (48%), Gaps = 21/325 (6%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  +++ +T  G +YS G+N  GQLGH    +  R + I  L      +AA G
Sbjct: 62  EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKAACG 119

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 162
           A  T+ I++ GQ++++G ++  E + G+     + +SP++V++L    VVQ A G     
Sbjct: 120 AYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+  G +Y++   ++ +LG  T+   +++P   +     IP+  IA G  +  ++A   
Sbjct: 178 ALTNNGELYSWGSNSEGQLGLGTDTKYEIKPK-FISAFIGIPIAFIACGGYH--SIAISK 234

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           SG AV+  G    G+LG     D   P  ++  Q  N +    A G   +  +  DG V 
Sbjct: 235 SG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTVDGGVF 291

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
           T G G YG LGHG+   E +P+ V  L       ++ G  +T  +V   G VY++G G +
Sbjct: 292 TCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351

Query: 341 ASLGHNAIADGQGNRHANVLTPQLV 365
             LG+++          +V TPQ+V
Sbjct: 352 GQLGNHST--------RSVTTPQVV 368



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HSIA++  G V+ +G N+ GQLG   T++   P  +++LQ  +I  AA G   ++ ++  
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVD 287

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G    +++  P+ V  L    V Q + G   T A++   GRVY 
Sbjct: 288 GGVFTCGAGMYGQLGHGSNSNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 345

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
           +  G   +LG+H+  +   P  + G
Sbjct: 346 WGLGGAGQLGNHSTRSVTTPQVVHG 370



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           ++  G  + G+LG G   DE    PR ++  +   +Q +  A G  +  V+ Q G + + 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI--ACGENYTVVITQIGEIYSC 85

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LGH  E+     +++  L+       A G Y T  ++E G ++S+G      L
Sbjct: 86  GNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G N+       ++    +P++V +L      VVQI+         H FALT +G+LY++G
Sbjct: 144 GLNS-------KNFMESSPRMVKTLG--TSVVVQIACGMK-----HAFALTNNGELYSWG 189

Query: 404 AGDKGQLGI 412
           +  +GQLG+
Sbjct: 190 SNSEGQLGL 198



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           + QIA G  Y + +        +YS G    G+LGH      K  +LI        +   
Sbjct: 63  IQQIACGENYTVVIT---QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKA- 116

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYT 322
            A GA+H   + + G++ +WG    G LG  ++   ES P++V+ L     + +A G   
Sbjct: 117 -ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKH 175

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
            F ++ +G++YS+G      LG        G      + P+ +++        + I +  
Sbjct: 176 AFALTNNGELYSWGSNSEGQLG-------LGTDTKYEIKPKFISAF-------IGIPIAF 221

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+ A+++SG ++ +G    GQLG+   N+  +R  P
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGL---NDTQDRNLP 260



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 24/155 (15%)

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVA 317
           +PV+      H     +   +  WG   +G LG G  E E++  P+ +      +   +A
Sbjct: 13  EPVIAVEYPLH-----KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIA 67

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G+  T V+++ G++YS G  +   LGH      +G +       QL+  L         
Sbjct: 68  CGENYTVVITQIGEIYSCGNNDYGQLGHE-----KGRKRL-----QLIPGLDA------- 110

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                +     HT A+ E G+L+++G+  +GQLG+
Sbjct: 111 FVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGL 145


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 24/298 (8%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
           N++ +A G  H+ AVT  G +Y++G++  S G +GH      W P+ + S L+G+RI   
Sbjct: 342 NAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSI 401

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A GA  T L+S AGQ++ FG  +FG   +G +  + +  P+ VESLK +  V+AA G + 
Sbjct: 402 ACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKTVRAACGIWH 459

Query: 161 TAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           TA +               G+++T+  G+  RLGH  +   + P   +  L +    Q+A
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPT-CVAALVDYNFRQVA 518

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G+   +AL    SG  V+++G  + G+LG+  + D K P +++  +L       +  GA
Sbjct: 519 CGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELARTFVEEIGCGA 573

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            H A +     + TWG G  G LGHG+ E  + P +V+AL D +   VA G   T V+
Sbjct: 574 HHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVI 631



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 42/361 (11%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G G+  +   P+ +++   + +   A G+    L++  G V+ +G++  G   +G+    
Sbjct: 270 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD- 328

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 191
            V+ PQLV++L  +     A G+F T  ++  G +YT  WG DA+    +GH    +   
Sbjct: 329 -VSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYT--WGADAQSGGLVGHSNPVSHWM 385

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           P  +   LE + +  IA G  +   ++   S   +++ G G  G LGHG + +   P+ +
Sbjct: 386 PKRMSSPLEGVRISSIACGAWHTALVS---SAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 442

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 299
           E  +   L+ V  A G WH A V +             G++ TWG G    LGHG++E +
Sbjct: 443 ESLK--GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQK 500

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  V AL D     VA G   T  ++  G V++ G      LG N  ADG+       
Sbjct: 501 LVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG-NPKADGK------- 552

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             P +V       +  +  +    I   AH   AL+   ++Y +G G  G+LG   V ++
Sbjct: 553 -VPGMV-------DGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDR 604

Query: 419 T 419
           T
Sbjct: 605 T 605



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 38/307 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
           P+ +++   + V   A G+   A+++++G V  F WG +   RLGH  + +  EP  L+ 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 336

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L  +    +A G  +  A+      +  +      GG +GH +      P+ +    L 
Sbjct: 337 ALAGVNAELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 394

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            ++   +A GAWH A+V   G++ T+G G +G LGHG++   ++PK V++L  +K +  A
Sbjct: 395 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 454

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 455 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH-------GDKEQK-LVPTCV 506

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L   N R  Q++  +S+     T ALT SG+++  G+   GQLG    N + +   P 
Sbjct: 507 AALVDYNFR--QVACGHSL-----TVALTTSGRVFTMGSTIYGQLG----NPKADGKVPG 555

Query: 426 RVDIDLS 432
            VD +L+
Sbjct: 556 MVDGELA 562


>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 439

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 26/347 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSG-QLGHGTTEEE------WRPRPIRSLQGIRIIQAAA 102
           AG  HS+ +T  G VY+ G + +G QLG     EE      + P  +  L  + +++ AA
Sbjct: 100 AGENHSLFLTDDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAA 159

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +++++    VY+FG++ +G    G    +   +P LVE+L+   +VQ   G+  +A
Sbjct: 160 GPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRW--TPTLVEALRGEEIVQVVAGDTNSA 217

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ-- 220
            +++ G+V  F WG+  R       ND     L+  L   P+  +A G C+ L L     
Sbjct: 218 AITKSGQV--FMWGS-CRSCIDLPSNDPTKPTLVEALSGTPIAAVALGECHCLFLTTDGL 274

Query: 221 --PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
               G+ +Y  G  LG  +    R +++ PR I  F         +AAG  H+ V+ +DG
Sbjct: 275 VLSCGLDLYHSGL-LGYDVRDNPRKEQRVPRPIPHFT--GEVAAAIAAGEGHSLVLTRDG 331

Query: 279 RVCTWGWGRYGCLGHGNEECE-------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
           R+  +G  R G LG G    E        +P  V AL  V+   V      +  ++ DG 
Sbjct: 332 RLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALAHVQVAGVVAAPLHSCAIAHDGS 391

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           VYSFG GE   LGH         +  + L P  +TS+       + +
Sbjct: 392 VYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTLAL 438



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 168/394 (42%), Gaps = 48/394 (12%)

Query: 61  KGVVYSFGSNSS----GQLGHGTTEE-------EWR-PRPIRSLQGIRIIQAAAGAGRTM 108
           +G+V+SFG   S      LGH   EE        W  P  I +L+G+RI   AAG   ++
Sbjct: 47  RGLVFSFGGGDSHFDQSVLGHPRQEEPSSHQGVRWAAPARIGALRGLRIAAVAAGENHSL 106

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTK------LVTSPQLVESLKNIFVVQAAIGNFFTA 162
            ++D GQVYA G  S   ++ G  G +      +   P+ V  L ++ VV+ A G   + 
Sbjct: 107 FLTDDGQVYACGV-SLNGSQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAAGPTHSL 165

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           VL+    VY+F       LG     N   P  L+  L    +VQ+ AG     + A   S
Sbjct: 166 VLTSTAAVYSFGENRYGHLGLGDYENRWTP-TLVEALRGEEIVQVVAGDTN--SAAITKS 222

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVC 281
           G       C     L      D   P L+E    L+  P+  VA G  H   +  DG V 
Sbjct: 223 GQVFMWGSCRSCIDL---PSNDPTKPTLVEA---LSGTPIAAVALGECHCLFLTTDGLVL 276

Query: 282 TWGWGRY--GCLGHGNEEC----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           + G   Y  G LG+   +     + VP+ +       A  +A G+  + V++ DG +++F
Sbjct: 277 SCGLDLYHSGLLGYDVRDNPRKEQRVPRPIPHFTGEVAAAIAAGEGHSLVLTRDGRLFAF 336

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G   S  LG      G+ +   NV  P   T L      +  + +   +    H+ A+  
Sbjct: 337 GDNRSGQLGL-----GRTSPELNVSKP---TELPSPVAALAHVQVAGVVAAPLHSCAIAH 388

Query: 396 SGKLYAFGAGDKGQLGIELVNNQTERGN-PERVD 428
            G +Y+FG G+  QLG    +  T+  N P+++D
Sbjct: 389 DGSVYSFGDGEFYQLG----HGTTDSWNVPKKID 418



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 14/235 (5%)

Query: 27  WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
           W   L   L GE     E  Q +AG  +S A+T  G V+ +GS  S       + +  +P
Sbjct: 193 WTPTLVEALRGE-----EIVQVVAGDTNSAAITKSGQVFMWGSCRSCI--DLPSNDPTKP 245

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF--GEAEYGVQGT--KLVTSPQL 142
             + +L G  I   A G    + ++  G V + G D +  G   Y V+    K    P+ 
Sbjct: 246 TLVEALSGTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRP 305

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTL 199
           +           A G   + VL+R+GR++ F      +LG      E N  +P  L   +
Sbjct: 306 IPHFTGEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPV 365

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
             +  VQ+A      L         +VYS G G   +LGHG+      P+ I+  
Sbjct: 366 AALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDAL 420



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +A P HS A+   G VYSFG     QLGHGTT+    P+ I +L    +   A+    T+
Sbjct: 377 VAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTL 436

Query: 109 LI 110
            +
Sbjct: 437 AL 438


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 172/356 (48%), Gaps = 35/356 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           + ++GS   GQLG GT EE+     + +L+   +    +G+  ++ I D G ++ +G + 
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK    P  V++L N+ + QAAIG +    +  +GR Y  +WG +     
Sbjct: 67  RGTLGHQPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123

Query: 184 HTEP-NDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             EP  D    P+   +         + V Q+AAG  + + L  +     V++     G 
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGH---VWT----WGQ 176

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
               G       P  ++  + + L    +A GA+H   + +DGR+  WG   YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +  S P  VQ L+D+  + +A G + +  +++ G+VY +G GE   LG   + D   N 
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG---LGD---ND 286

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++ + PQ V  L +  E ++Q+S   +     H+ ALT  G++++FG GD G+LG
Sbjct: 287 KSSKMVPQKVNLLAE--EDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 151/311 (48%), Gaps = 32/311 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           ++G  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  ++I QAA G    
Sbjct: 44  VSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + + D G+ YA+G + +G+        E G    + +  P+       + V Q A G   
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
           + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A +     
Sbjct: 162 SVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGAFH----N 208

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA +  G  + + G    G+LG G      HP  ++    L L  V +AAG WH+  +  
Sbjct: 209 LALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTL--VDIAAGGWHSTALTD 265

Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            G V  WG G +G LG G+ +  S  VP+ V  L +   I V+ G   +  ++ DG ++S
Sbjct: 266 KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFS 325

Query: 335 FGCGESASLGH 345
           FG G+   LG+
Sbjct: 326 FGRGDHGRLGY 336



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 25/267 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPR------PIRSLQGIRII 98
           +QA  G  H +AV  +G  Y++G N  GQ G    ++E  RP       P R    + + 
Sbjct: 94  TQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR 153

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q AAG   +++++  G V+ +G+       +     K ++ P  V+ L+N+ ++  A+G 
Sbjct: 154 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGA 205

Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           F    L  +GR+   +WGN+   +LG         P P+ G L+++ +V IAAG  +  A
Sbjct: 206 FHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTSHPVPVQG-LDDLTLVDIAAGGWHSTA 262

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L  +     VY  G G  G+LG G   D+    + ++  LL  + ++ V+ G  H+  + 
Sbjct: 263 LTDKGE---VYGWGRGEHGRLGLGD-NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP 302
           +DGR+ ++G G +G LG+G +     P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+   G + ++G+N  GQLG G T+    P P++ L  + ++  AA
Sbjct: 196 ENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAA 255

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  ++D G+VY +G+   G    G         PQ V  L    ++Q + G   + 
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR+++F  G+  RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 22/153 (14%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           +  WG G  G LG G  E +    VV+AL       V +G   +  + +DG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSIYWNAHTFALTES 396
             +LGH                 Q  T  + +  RV     + +T +     H  A+ + 
Sbjct: 67  RGTLGH-----------------QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           G+ YA+G  + GQ G E + +  E G P R DI
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 19/309 (6%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
            R   +   G  HSI +   G VY+ G N+ GQLGH   +E  +P  I +L    II  A
Sbjct: 92  ERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH--EKEGSKPEQIGALADQHIIHVA 149

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFF 160
            G   ++ +SD G+++++G  S G+   G+  T+  V  P+L++ L    ++Q + GN+ 
Sbjct: 150 CGESHSLALSDQGRLFSWGAGSDGQL--GLTTTEDSVAVPRLIKKLNQEMILQVSCGNWH 207

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              L+ +G+   F+WG ++  +LG   E P+   P   + +L+ IP+ Q+AAG  +  AL
Sbjct: 208 CLALAADGQF--FAWGQNSHGQLGLGKEFPSQASPQ-RVKSLDGIPLAQVAAGGAHSFAL 264

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
           +   SG AV+  G    G+LG     D + P  +   +LL  Q VV ++ G+ H AV+ +
Sbjct: 265 SL--SG-AVFGWGKNTSGQLGLSDEQDRESPCHV---KLLRTQKVVYISCGSDHTAVLTK 318

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSF 335
            G V T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G +Y+F
Sbjct: 319 TGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378

Query: 336 GCGESASLG 344
           GCG    LG
Sbjct: 379 GCGIKGQLG 387



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 153/329 (46%), Gaps = 26/329 (7%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            PR    +    + + A G   ++ + + G+VY  G ++ G+  +  +G+K    P+ + 
Sbjct: 83  EPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK----PEQIG 138

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
           +L +  ++  A G   +  LS +GR++++  G+D +LG  T  + V    L+  L    +
Sbjct: 139 ALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI 198

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVV 263
           +Q++ G  + LALA   +    ++ G    G+LG G     +  P+ ++    + L    
Sbjct: 199 LQVSCGNWHCLALA---ADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPL--AQ 253

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G   T
Sbjct: 254 VAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHT 313

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
            V+++ G V++FG G    LGH++  D    R            L+ +   V QI+    
Sbjct: 314 AVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRV----------LELMGSEVSQIACGRQ 363

Query: 384 IYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                HT A    SG +YAFG G KGQLG
Sbjct: 364 -----HTLAFVPSSGLIYAFGCGIKGQLG 387



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 35/312 (11%)

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G   +G  GT     P ++E   + F     V + A G   +  L  +G VYT      
Sbjct: 63  WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH  E +  E    +G L +  ++ +A G  + LAL+ Q     ++S G G  G+LG
Sbjct: 123 GQLGHEKEGSKPEQ---IGALADQHIIHVACGESHSLALSDQGR---LFSWGAGSDGQLG 176

Query: 239 HGSRTDE-KHPRLIEQF-QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
             +  D    PRLI++  Q + LQ   V+ G WH   +  DG+   WG   +G LG G E
Sbjct: 177 LTTTEDSVAVPRLIKKLNQEMILQ---VSCGNWHCLALAADGQFFAWGQNSHGQLGLGKE 233

Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
              ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +   
Sbjct: 234 FPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPC 293

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           H  +L  Q          +VV IS  +      HT  LT++G ++ FGAG  GQLG +  
Sbjct: 294 HVKLLRTQ----------KVVYISCGSD-----HTAVLTKTGGVFTFGAGSCGQLGHDSF 338

Query: 416 NNQTERGNPERV 427
           N++    NP RV
Sbjct: 339 NDEV---NPRRV 347



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 138/298 (46%), Gaps = 28/298 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  TTE+    PR I+ L    I+Q + G    + 
Sbjct: 151 GESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLA 210

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ +A+G++S G+   G +      SPQ V+SL  I + Q A G   +  LS  G 
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 269

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG +   +LG   E  D E    +  L    VV I+ G  +   L        V+
Sbjct: 270 V--FGWGKNTSGQLGLSDE-QDRESPCHVKLLRTQKVVYISCGSDHTAVLT---KTGGVF 323

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381

Query: 287 RYGCLGHG---NEEC------------ESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
             G LG G   N +C            E V +   A       H+ +G   TFV+  +
Sbjct: 382 IKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVLCSE 439



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N+SGQLG    ++   P  ++ L+  +++  + G+ 
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSD 311

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++  G V+ FG  S G+   G        +P+ V  L    V Q A G   T A +
Sbjct: 312 HTAVLTKTGGVFTFGAGSCGQL--GHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFV 369

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 370 PSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKG 402



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 19/136 (13%)

Query: 279 RVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           ++  WG+  +G  G  +     +  P+    +++     VA G   +  + EDG+VY+ G
Sbjct: 59  KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                 LGH    + +G++      P+ + +L   ++ ++ ++   S     H+ AL++ 
Sbjct: 119 VNTKGQLGH----EKEGSK------PEQIGAL--ADQHIIHVACGES-----HSLALSDQ 161

Query: 397 GKLYAFGAGDKGQLGI 412
           G+L+++GAG  GQLG+
Sbjct: 162 GRLFSWGAGSDGQLGL 177


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 166/367 (45%), Gaps = 35/367 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+ + G+++++G N SGQLG+GT   E  PR + S    R+   A+G   T  +   
Sbjct: 663 HTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFA--RVQGFASGLRTTFALRAD 720

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G +S G+   G        SP  V+++     V  A G      +S +G V++F
Sbjct: 721 GTVWAWGDNSLGQLGNGAT----SASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSF 776

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              +  +LG+        P  L G  E I  V  AAG  + LAL+C      V++ G   
Sbjct: 777 GSNSRGQLGYEGSATQTSPRWLTGP-ECIEAV--AAGALFSLALSCD---GGVWAWGDNG 830

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG G+ T    P  +     +    V +AAG+ HA  V  DG V  WG    G LG 
Sbjct: 831 SGQLGDGAVTARTAPARVPGLAHV----VAIAAGSDHALAVRADGTVWAWGANGSGQLGD 886

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G     +VP  V+ L DV  + VA G   +  V  DG V+++G   S  LG        G
Sbjct: 887 GTTTSRAVPMQVKELVDV--VAVAGGSGHSLAVRADGTVWAWGANGSGQLG-------DG 937

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
              +  L P  V++L  V                 H+ AL E G ++A+GA   GQLG  
Sbjct: 938 TTTSRTL-PVFVSTLSGVQAIASGAQ---------HSLALAEGGVVWAWGANGSGQLGDG 987

Query: 414 LVNNQTE 420
              ++T 
Sbjct: 988 TTTSRTR 994



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 178/370 (48%), Gaps = 40/370 (10%)

Query: 55   SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
            + A+ + G V+++G NS GQLG+G T     P P++++   R +  A+GA   + +S  G
Sbjct: 714  TFALRADGTVWAWGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDG 771

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
             V++FG +S G+  Y  +G+   TSP+ +   + I  V A  G  F+  LS +G V+  +
Sbjct: 772  SVFSFGSNSRGQLGY--EGSATQTSPRWLTGPECIEAVAA--GALFSLALSCDGGVW--A 825

Query: 175  WGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            WG++   +LG         P  + G      VV IAAG  + LA+    +   V++ G  
Sbjct: 826  WGDNGSGQLGDGAVTARTAPARVPGLAH---VVAIAAGSDHALAVRADGT---VWAWGAN 879

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              G+LG G+ T    P  +++     +  V VA G+ H+  V  DG V  WG    G LG
Sbjct: 880  GSGQLGDGTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLG 935

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G     ++P  V  L+ V+AI  A+G   +  ++E G V+++G   S  LG     DG 
Sbjct: 936  DGTTTSRTLPVFVSTLSGVQAI--ASGAQHSLALAEGGVVWAWGANGSGQLG-----DGT 988

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                     P  V+ L  V   V   S +          ALT  GK++++G    GQLG 
Sbjct: 989  TTSRTR---PVQVSGLSGVQGLVAGASFS---------LALTP-GKVWSWGNNSAGQLGD 1035

Query: 413  ELVNNQTERG 422
              +N++++ G
Sbjct: 1036 GTLNSRSQPG 1045



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 174/380 (45%), Gaps = 40/380 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTM 108
           AG  HS+A+ S G V+++G NS GQLG G T     PR    + G+ +I   AAG   ++
Sbjct: 507 AGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRG--PRAPAVVPGLAVITHVAAGLFHSL 564

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-GNFFTAVLSRE 167
            +  +GQV+A+G + +G+   G   ++ V  P  V  L     +QA + G  ++  L  +
Sbjct: 565 ALDSSGQVWAWGDNVYGQLGDGSTTSRNV--PGRVSGLP--AGIQAIVAGPSYSVALGAD 620

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G V+T+   ++ +LG  T      P P      ++P   +A        +A   +GM ++
Sbjct: 621 GSVWTWGENSNGQLGDGT--TTARPVP---ARVSLPATLVALSTRGSHTVALDTTGM-LW 674

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G  + G+LG+G+   E  PR +  F  +       A+G      +  DG V  WG   
Sbjct: 675 AWGRNVSGQLGNGTLVSESTPRRVPSFARVQ----GFASGLRTTFALRADGTVWAWGDNS 730

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG+G      VP  VQA+   + + +A+G      VS DG V+SFG      LG+  
Sbjct: 731 LGQLGNGATSASPVP--VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEG 788

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                    A   +P+ +T  + + E V   +L         + AL+  G ++A+G    
Sbjct: 789 --------SATQTSPRWLTGPECI-EAVAAGAL--------FSLALSCDGGVWAWGDNGS 831

Query: 408 GQLGIELVNNQTERGNPERV 427
           GQLG   V   T R  P RV
Sbjct: 832 GQLGDGAV---TARTAPARV 848



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 164/374 (43%), Gaps = 47/374 (12%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A+ S G V+++G N+ GQLG   T    RP P +        + AAG   ++ +   
Sbjct: 461 HSLALRSDGTVWAWGDNAYGQLGD--TSGGRRPSPAQVPGVAGATEIAAGTYHSLALRSD 518

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+ +G +S+G+   G    +   +P +V  L    +   A G F +  L   G+V+  
Sbjct: 519 GTVWTWGDNSYGQLGAGAT-PRGPRAPAVVPGLA--VITHVAAGLFHSLALDSSGQVW-- 573

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSV 229
           +WG++   +LG  +  +   P    G +  +P  +  I AG  Y +AL    S   V++ 
Sbjct: 574 AWGDNVYGQLGDGSTTSRNVP----GRVSGLPAGIQAIVAGPSYSVALGADGS---VWTW 626

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-- 287
           G    G+LG G+ T    P  +      +L   +VA     +  V  D     W WGR  
Sbjct: 627 GENSNGQLGDGTTTARPVPARV------SLPATLVALSTRGSHTVALDTTGMLWAWGRNV 680

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG+G    ES P+ V +   V+    A+G  TTF +  DG V+++G      LG+ A
Sbjct: 681 SGQLGNGTLVSESTPRRVPSFARVQGF--ASGLRTTFALRADGTVWAWGDNSLGQLGNGA 738

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGD 406
                             TS   V  + V    T  +   A H  A++  G +++FG+  
Sbjct: 739 ------------------TSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNS 780

Query: 407 KGQLGIELVNNQTE 420
           +GQLG E    QT 
Sbjct: 781 RGQLGYEGSATQTS 794



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 170/385 (44%), Gaps = 51/385 (13%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ VT  G V+++G+N+ GQLG G+T +   P  +  L G+  +  AAG   +M 
Sbjct: 55  AGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAV--AAGNTHSMA 112

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G V+ +G ++ G+   GV    +   P  V  L  +  + A  GN  +  L   G 
Sbjct: 113 LREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGVTAIAA--GNLHSLAL-INGA 166

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WGN+   +LG  +  +   P  + G  E   VV IAAG  + LAL    +   V+
Sbjct: 167 VW--AWGNNTTGQLGDGSSTSRSTPAKVAGLTE---VVAIAAGDFHSLALKRDGT---VW 218

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD---GRVCTWG 284
           + G    G+LG G+      P  +     +    V +A G  H+         G+V  WG
Sbjct: 219 AWGGNYSGQLGDGTLDSRSTPVRVSGLTGI----VALAGGGSHSVAASSTTLGGKVWAWG 274

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              YG LG+G +    +P  V  L  V A+  A+G   +  +  D  V+++G        
Sbjct: 275 DNTYGQLGNGGDVSSLLPLEVPGLTQVVAL--ASGTSHSLALRGDDSVWAWG-------- 324

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK--LYAF 402
                      +A   T Q  TS+++V  RV  +S   ++    + F+L   G      +
Sbjct: 325 ----------DNAQAQTAQTGTSVQRVPVRVSGVSDAQALA-CGNAFSLVGRGDNVTLGW 373

Query: 403 GAGDKGQLGIELVNNQTERGNPERV 427
           GA   GQLG     + + R  P RV
Sbjct: 374 GANGSGQLGN---GSSSVRALPGRV 395



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 21/296 (7%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTMLISD 112
            H +AV+S G V+SFGSNS GQLG+  +  +  P   R L G   I+A AAGA  ++ +S 
Sbjct: 763  HVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSP---RWLTGPECIEAVAAGALFSLALSC 819

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
             G V+A+G +  G  + G       T+P  V  L ++  + A  G+     +  +G V+ 
Sbjct: 820  DGGVWAWGDN--GSGQLGDGAVTARTAPARVPGLAHVVAIAA--GSDHALAVRADGTVWA 875

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            +      +LG  T  +   P   +   E + VV +A G  + LA+    +   V++ G  
Sbjct: 876  WGANGSGQLGDGTTTSRAVP---MQVKELVDVVAVAGGSGHSLAVRADGT---VWAWGAN 929

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              G+LG G+ T    P  +     +      +A+GA H+  + + G V  WG    G LG
Sbjct: 930  GSGQLGDGTTTSRTLPVFVSTLSGVQ----AIASGAQHSLALAEGGVVWAWGANGSGQLG 985

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
             G     + P  V  L+ V+ + VA   ++  +    G V+S+G   +  LG   +
Sbjct: 986  DGTTTSRTRPVQVSGLSGVQGL-VAGASFSLALT--PGKVWSWGNNSAGQLGDGTL 1038



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 160/377 (42%), Gaps = 61/377 (16%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+++G N SGQLG GT +   R  P+R + G+  I A AG G   +
Sbjct: 203 AGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS--RSTPVR-VSGLTGIVALAGGGSHSV 259

Query: 110 ISDA----GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +    G+V+A+G +++G+   G   + L+  P  V  L  +     A+ +  +  L+
Sbjct: 260 AASSTTLGGKVWAWGDNTYGQLGNGGDVSSLL--PLEVPGLTQVV----ALASGTSHSLA 313

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G    ++WG++A+         V+  P+             +G     ALAC   G A
Sbjct: 314 LRGDDSVWAWGDNAQAQTAQTGTSVQRVPVR-----------VSGVSDAQALAC---GNA 359

Query: 226 VYSVGCG----LG------GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              VG G    LG      G+LG+GS +    P  +            +AAG  H  +  
Sbjct: 360 FSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPSLT----AGASLAAGDHHVFLRQ 415

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            DG V  WG   YG LG G       P ++   L  V+A+  ++  Y +  +  DG V++
Sbjct: 416 ADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASS--YHSLALRSDGTVWA 473

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G      LG     D  G R     +P  V  +    E      +    Y   H+ AL 
Sbjct: 474 WGDNAYGQLG-----DTSGGRRP---SPAQVPGVAGATE------IAAGTY---HSLALR 516

Query: 395 ESGKLYAFGAGDKGQLG 411
             G ++ +G    GQLG
Sbjct: 517 SDGTVWTWGDNSYGQLG 533



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 43/324 (13%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           R  P  S+QG R  + AAG   ++ ++ AG V+A+G ++ G  + G   T   ++P  V 
Sbjct: 39  RRAPAISVQG-RPYRLAAGLNHSLYVTPAGTVWAWGANAQG--QLGEGSTLQHSTPTQVV 95

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
            L  +  V A  GN  +  L  EG V+T+    D +LG       V P  + G      V
Sbjct: 96  GLTGVTAVAA--GNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSV-PAQVAGLTG---V 149

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             IAAG  + LAL       AV++ G    G+LG GS T    P  +        + V +
Sbjct: 150 TAIAAGNLHSLALING----AVWAWGNNTTGQLGDGSSTSRSTPAKVAGLT----EVVAI 201

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-----HVATG 319
           AAG +H+  + +DG V  WG    G LG G  +  S P  V  L  + A+     H    
Sbjct: 202 AAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAA 261

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
             TT      G V+++G      LG+            + L P  V  L QV      ++
Sbjct: 262 SSTTL----GGKVWAWGDNTYGQLGNGG--------DVSSLLPLEVPGLTQV------VA 303

Query: 380 LTNSIYWNAHTFALTESGKLYAFG 403
           L +     +H+ AL     ++A+G
Sbjct: 304 LASG---TSHSLALRGDDSVWAWG 324



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 19/236 (8%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  H++AV + G V+++G+N SGQLG GTT     P  ++ L  + ++  A G+G ++ 
Sbjct: 859  AGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL--VDVVAVAGGSGHSLA 916

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G +  G+   G   ++  T P  V +L  +  +  A G   +  L+  G 
Sbjct: 917  VRADGTVWAWGANGSGQLGDGTTTSR--TLPVFVSTLSGVQAI--ASGAQHSLALAEGGV 972

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 228
            V+ +      +LG  T  +   P  + G    +  VQ + AG  + LAL        V+S
Sbjct: 973  VWAWGANGSGQLGDGTTTSRTRPVQVSG----LSGVQGLVAGASFSLALTPG----KVWS 1024

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             G    G+LG G+      P             V ++AGA H  V+  D    +WG
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPGAGPTLSSF----VALSAGAQHTVVLRSDDSFLSWG 1076



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 19/288 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG   S+A++  G V+++G N SGQLG G      R  P R      ++  AAG+   + 
Sbjct: 809  AGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA--RTAPARVPGLAHVVAIAAGSDHALA 866

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G +  G+   G   ++ V  P  V+ L ++  V    G+     +  +G 
Sbjct: 867  VRADGTVWAWGANGSGQLGDGTTTSRAV--PMQVKELVDVVAVAGGSGHSL--AVRADGT 922

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+ +      +LG  T  +   P   + TL  +    IA+G  + LALA    G  V++ 
Sbjct: 923  VWAWGANGSGQLGDGTTTSRTLPV-FVSTLSGVQA--IASGAQHSLALA---EGGVVWAW 976

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G    G+LG G+ T    P  ++   L  +Q +V  A     ++    G+V +WG    G
Sbjct: 977  GANGSGQLGDGTTTSRTRP--VQVSGLSGVQGLVAGA---SFSLALTPGKVWSWGNNSAG 1031

Query: 290  CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
             LG G     S P     L+   A+  + G   T V+  D    S+G 
Sbjct: 1032 QLGDGTLNSRSQPGAGPTLSSFVAL--SAGAQHTVVLRSDDSFLSWGT 1077



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 10/132 (7%)

Query: 47   QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            QAIA G  HS+A+   GVV+++G+N SGQLG GTT    RP  +  L G++ +   AGA 
Sbjct: 955  QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGL--VAGAS 1012

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             ++ ++  G+V+++G +S G+   G   ++  + P    +L +   + A  G   T VL 
Sbjct: 1013 FSLALTP-GKVWSWGNNSAGQLGDGTLNSR--SQPGAGPTLSSFVALSA--GAQHTVVLR 1067

Query: 166  REGRVYTFSWGN 177
             +      SWG 
Sbjct: 1068 SDDSF--LSWGT 1077



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 68/168 (40%), Gaps = 24/168 (14%)

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           +P  +AAG  H+  V   G V  WG    G LG G+    S P  V  L  V A  VA G
Sbjct: 49  RPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTA--VAAG 106

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           +  +  + E+G V+++G      LG     DG   R      P  V  L  V        
Sbjct: 107 NTHSMALREEGTVWTWGTNTDGQLG-----DGVSQRS----VPAQVAGLTGVTAIAAG-- 155

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                  N H+ AL   G ++A+G    GQLG     + T R  P +V
Sbjct: 156 -------NLHSLALIN-GAVWAWGNNTTGQLGD---GSSTSRSTPAKV 192


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P   + L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           K I VA  +GD     V+++G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 41/331 (12%)

Query: 88  PIRS--LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
           PI+S  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  V   +G      V  +G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  +++DG VYS+G G++  LGH            +V  P+L+ +L+   ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEALQ--GKKVIDV 715

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +  ++     H  ALTE  +++++G  D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGNNDQCQ 741



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 26/325 (8%)

Query: 91   SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
            +L  + ++Q A G+     ++  G+VYA G+ + G    G+  +  V  P+ V +L +  
Sbjct: 2692 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMS-SGTVPIPRQVTALSSYV 2750

Query: 151  VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
            V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L+   +  IA
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 2809

Query: 209  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
             G  +  AL    S   +Y+ G G  G+LGHG  T +  P++++   LL  + + VA G+
Sbjct: 2810 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGS 2864

Query: 269  WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
              A  +    +G V +WG G +G LG G  E  +VP+ ++ LN      +  G   +  +
Sbjct: 2865 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2924

Query: 327  SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
            ++ G V+++G G+   LGH +          +V  PQ+V  L+   +++V +++      
Sbjct: 2925 TKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVGA---- 2970

Query: 387  NAHTFALTESGKLYAFGAGDKGQLG 411
              H  A+T++G++YA+G  D GQ G
Sbjct: 2971 -LHCLAVTDAGQVYAWGDNDHGQQG 2994



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 160/359 (44%), Gaps = 31/359 (8%)

Query: 55   SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
            +++    G +Y +G N  GQLG     +   P P  +L  +R +Q   G      ++  G
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3683

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
            ++YA G  +      GV GT+ V++P L+ES++++F+ + A+  G      LS EG VY+
Sbjct: 3684 KLYATGYGA--GGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYS 3741

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            +    D +LGH        P  ++ +L    VV IAAG  +    AC  S   +Y+ G G
Sbjct: 3742 WGEAEDGKLGHGNRSPCDRPR-VVESLRGTEVVDIAAGGAHS---ACVTSAGDLYTWGKG 3797

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              G+LGH    D+  P+L+E  Q   +  V   +G      +  D  V +WG G YG LG
Sbjct: 3798 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3857

Query: 293  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             G  +   VP  V     V         +    V   GD +  G G              
Sbjct: 3858 RGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSD------------ 3905

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +V  P+ V  L+   ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 3906 ----DHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEEGEVYTWGDNDEGQLG 3953



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L+G+++I  A G+G  + +
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++D GQV+++G   +G  + G  G+    +P+L+E L+++ VV+   G+ F+  L+++G
Sbjct: 620 AVTDNGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +VY++  G++ RLGH TE +   P  LL  L+   V+ +AAG  + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEALQGKKVIDVAAGSTHCLAL 725



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 165/355 (46%), Gaps = 24/355 (6%)

Query: 45   NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
            N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR + +L    + + A 
Sbjct: 2697 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAV 2756

Query: 103  GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             +G    T L  D G+V+++G+   G+   G         P+L+E+LK   +   A G+ 
Sbjct: 2757 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2813

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 2814 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2872

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
               G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 2873 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2928

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
             V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G  
Sbjct: 2929 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2988

Query: 339  ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            +            QGN    V   P LV  L+      V    ++S+ W     A
Sbjct: 2989 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMA 3034



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 20/277 (7%)

Query: 137  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
            +  P   E+L  + VVQ A G+     ++ EG+VY      + RLG       V     +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743

Query: 197  GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
              L +  V ++A       A A    G  V+S G G  GKLGH SR +   PRLIE  + 
Sbjct: 2744 TALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 2802

Query: 257  LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
              ++   +A G+ H+A +   G + TWG G YG LGHG+   +  PK+V+ L   + I V
Sbjct: 2803 KRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2860

Query: 317  ATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            A G  D  T  ++++G V+S+G G+   LG        G+   NV  PQ +  L    + 
Sbjct: 2861 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNV--PQNIERLN--GQG 2910

Query: 375  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V QI           + ALT+SG ++ +G GD  +LG
Sbjct: 2911 VCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 2942



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 166/366 (45%), Gaps = 26/366 (7%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA       Q I G     AVT+ G +Y+ G  + G+LG G TE    P  + S+Q + I
Sbjct: 3659 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFI 3718

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             + A  +G    + +S  G+VY++G+   G+  +G +       P++VESL+   VV  A
Sbjct: 3719 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGTEVVDIA 3776

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G   +A ++  G +YT+  G   RLGH    + ++P  L+  L+   VV +A G     
Sbjct: 3777 AGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 3835

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             L C      V+S G G  GKLG G     K P  +     L +        +W    VG
Sbjct: 3836 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLS--LRVGRPSTPPPSWPRLDVG 3892

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
                    G G Y  LGHG+++    P+ VQ L   K I +ATG       +E+G+VY++
Sbjct: 3893 --------GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTW 3944

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G  +   LG     DG  N    +  P+LV +L+      V     +++ W+    A   
Sbjct: 3945 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGRKVNRVACGSAHTLAWSTSKPA--S 3994

Query: 396  SGKLYA 401
            +GKL A
Sbjct: 3995 AGKLPA 4000



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
           H +A+ + G VYS+G    G+LGHG T     P+ I +  G +    ++  A G+  +  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--SRE 167
           I+  G++Y +G+ ++G   +G    + +  P LV  LK + V+  A G+     L  +  
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQPLAVTDN 624

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G+V+++  G+  +LG         P  L+  L+++ VV++  G  + +AL        VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G   +LGHG+    ++P+L+E  Q    + + VAAG+ H   + +D  V +WG   
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEALQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735

Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
                  N++C+           P ++  L+    + +A G   +F  S
Sbjct: 736 ------NNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWS 778



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 5/188 (2%)

Query: 24  GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
           G S    +  L+AG    +  +    +G    +AVT  G V+S+G    G+LG G ++  
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGC 646

Query: 84  WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
             P+ I  LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
           E+L+   V+  A G+     L+ +  V+  SWGN+ +  H    +  +P P LL  L+  
Sbjct: 705 EALQGKKVIDVAAGSTHCLALTEDSEVH--SWGNNDQCQHFDTLHQTKPEPSLLPGLDTK 762

Query: 203 PVVQIAAG 210
            +V IA G
Sbjct: 763 HIVGIACG 770



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
            L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 2906 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2960

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             +I+  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV+ L+   + + 
Sbjct: 2961 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3018

Query: 155  AIGN 158
            A G+
Sbjct: 3019 ACGS 3022


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 23/283 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHG     W P+ I  +L+G+ +   + G   T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  GQ++ FG  +FG   +G + +  ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITTMGQLFTFGDGTFGVLGHGNRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEV 254

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    +IA G+   + 
Sbjct: 255 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFHRIACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V S+G  + G+LG+  R+D K P L+E+    N+  V VA G++H AV+  
Sbjct: 314 LT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV--VQVACGSYHVAVLTI 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   +P +V+AL D    H+A G
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACG 410



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 154/342 (45%), Gaps = 40/342 (11%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           RP+P+ S   +       G   + L++  G+V+ +G++S G   +G +   +   P+L+E
Sbjct: 67  RPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIE 124

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
           SL    V   A G F T  ++  G +YT+  G  N   LGH  + +   P  + G LE +
Sbjct: 125 SLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGL 184

Query: 203 PVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            V  ++ G  +  L+    Q     +++ G G  G LGHG+R     P+ +E   L  L+
Sbjct: 185 AVAYVSCGTWHTALITTMGQ-----LFTFGDGTFGVLGHGNRESISCPKEVE--SLSGLK 237

Query: 261 PVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
            + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L 
Sbjct: 238 TISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLI 297

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D     +A G   T  ++  G V S G         N +    GN  ++   P LV  + 
Sbjct: 298 DYDFHRIACGHSLTVGLTTSGKVLSMG---------NTVYGQLGNPRSDGKIPCLVEEI- 347

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 348 -VGENVVQVACG-----SYHVAVLTIKSEVFTWGKGANGRLG 383



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 33/288 (11%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P+ +ES   +       G   +A++++ G V+T+   +  RLGH +  + +  HP L
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
             +E++ V  +    C         +   +Y+ G G    G LGHG       P+ I   
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG- 179

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  L    V+ G WH A++   G++ T+G G +G LGHGN E  S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239

Query: 315 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            VA G + T  + E            G ++++G G+   LGH       G++    L P 
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH-------GDKEPR-LKPT 291

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V SL  ++    +I+  +S+     T  LT SGK+ + G    GQLG
Sbjct: 292 CVASL--IDYDFHRIACGHSL-----TVGLTTSGKVLSMGNTVYGQLG 332


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 162/351 (46%), Gaps = 28/351 (7%)

Query: 64  VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           +Y++G   + +LG  GT ++  +P  I+  +   I Q A G G T+++ + G +++FG +
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            +G+   G +    + + + + SL N  +   A G + +A L   G V+T+  G + RLG
Sbjct: 72  QYGQLGNGTKVDSPLDASRDISSLSNKLIA-VACGRYHSAALDVNGTVFTWGGGKNGRLG 130

Query: 183 HHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           H    ND +   +   + ++P   +I  GY    A+    +   +Y+ G G  G+LG GS
Sbjct: 131 H----NDEQTRTIPCRITHLPRAHKIFCGYHITAAI----TDDGLYTWGWGEHGQLGQGS 182

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECES 300
             D   P+ +  F   NL    +A G  H  V  + G V TWG   +G LG G   E  S
Sbjct: 183 LEDSYGPKKV-IFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS 241

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            P ++ +L  +    VA GD  +  V+  G ++++GCG     GH    D          
Sbjct: 242 SPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCD-------- 293

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P LV SL       V + +      +  T AL++   +Y FG    GQLG
Sbjct: 294 MPFLVESL-------VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 12/300 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGA 104
           Q   G GH++ +   G ++SFG N  GQLG+GT  +      R I SL   ++I  A G 
Sbjct: 48  QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGR 106

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  +   G V+ +G    G   +  + T+ +  P  +  L     +    G   TA +
Sbjct: 107 YHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTI--PCRITHLPRAHKI--FCGYHITAAI 162

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G +YT+ WG   +LG  +  +   P  ++    N+ + Q+A G  + L    +    
Sbjct: 163 TDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLV---RTESG 218

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            VY+ G    G+LG G R +E +   +    L  +    VAAG  H+A V   G + TWG
Sbjct: 219 DVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWG 277

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G  GHG+     +P +V++L  V  + V  G   T  +S+D D+Y FG      LG
Sbjct: 278 CGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 21/247 (8%)

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +YT+    + RLG     +D     L+   EN  + Q+A G  + L L        ++S 
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLL---EDGCLHSF 68

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG+G++ D       +   L N + + VA G +H+A +  +G V TWG G+ G
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGGKNG 127

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LGH +E+  ++P  +  L   +A  +  G + T  +++DG +Y++G GE   LG  ++ 
Sbjct: 128 RLGHNDEQTRTIPCRITHL--PRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLE 184

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           D  G +        L  S     +R              H    TESG +Y +G+ + GQ
Sbjct: 185 DSYGPKKVIFDDANLAISQLACGDR--------------HCLVRTESGDVYTWGSNEFGQ 230

Query: 410 LGIELVN 416
           LGI   N
Sbjct: 231 LGIGRYN 237



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 3/170 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
           SQ   G  H +  T  G VY++GSN  GQLG G   E +  P  + SL G+ +   AAG 
Sbjct: 202 SQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGD 261

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  +++ G ++ +G  + G+  +G         P LVESL  +F+++   G+ FT  L
Sbjct: 262 RHSAAVTNTGSLFTWGCGAEGQCGHGDYND--CDMPFLVESLVGVFILKVFCGHNFTVAL 319

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           S++  +Y F   +  +LG  ++ +   P  L  ++     +     +C L
Sbjct: 320 SKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTIDITCGHFHCTL 369


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 184/404 (45%), Gaps = 36/404 (8%)

Query: 31  LRFLLAGEA--CCRRENSQAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEWRP 86
           L FL +  A  CC   +        HS A  S   G VY +GSN + QL  G  E+   P
Sbjct: 362 LYFLASDYASNCCSGPDENCNNSTSHSNANLSGSCGEVYVWGSNCTHQLAEGGQEKITTP 421

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES- 145
           +        +  Q  AG   T LI   G V A GK S+G    G      V    L +  
Sbjct: 422 KYSAVFTDCQ--QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKK 479

Query: 146 -LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
            +K I   + + G+  +  L+  G VY++  G+  +LGH T      P  + G L    V
Sbjct: 480 YVKKISSSKGSDGH--SLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVV 537

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             ++AGY +  A+        +Y+ G G  G+LGH   + +  P  ++  + + L    V
Sbjct: 538 KCVSAGYRHSAAVT---EDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL----V 590

Query: 265 AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           A G  H   V QDG+ + ++G G  G LGHG+   +  PKV++ALN +    VA G  ++
Sbjct: 591 ACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSS 650

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             V+  G +Y++GCG        AI  G G+     L P+LV  L+  ++R+V I+  +S
Sbjct: 651 LAVTSSGQLYAWGCG--------AIL-GCGSAEYTALRPRLVEDLQ--SKRMVDIACGDS 699

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                H  ALT   ++YA+G    GQ G     +   R  P+RV
Sbjct: 700 -----HVIALTHESEVYAWGNNAMGQCGQGHAQSPITR--PKRV 736



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 170/347 (48%), Gaps = 24/347 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSLQGIRIIQAAAGA- 104
           Q  AG   +  + S G V + G  S G+LG G +     P+ P+   + ++ I ++ G+ 
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSD 491

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAV 163
           G ++ ++  G+VY++G   +G+  +G   T+ +  P+LV+  L    V   + G   +A 
Sbjct: 492 GHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKI--PKLVKGPLVGKVVKCVSAGYRHSAA 549

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           ++ +G +YT+  G   RLGH    +   P  +  ++E++ +V     +     LA    G
Sbjct: 550 VTEDGELYTWGDGEFGRLGHDYTSSKNFPTKV-QSIESVGLVACGGSH----TLAVSQDG 604

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             ++S G G  GKLGHG    +  P++IE    L ++ V  A G+  +  V   G++  W
Sbjct: 605 KTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKV--ACGSQSSLAVTSSGQLYAW 662

Query: 284 GWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           G G    LG G+ E  ++ P++V+ L   + + +A GD     ++ + +VY++G      
Sbjct: 663 GCG--AILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWG------ 714

Query: 343 LGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
             +NA+   GQG+  + +  P+ V  L  V+   V    ++S+ W A
Sbjct: 715 --NNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 18/180 (10%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++AV+  G  ++SFG   +G+LGHG T  + +P+ I +L G+ I + A G+  ++ 
Sbjct: 593 GGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLA 652

Query: 110 ISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +GQ+YA+G  +    G AEY          P+LVE L++  +V  A G+     L+ 
Sbjct: 653 VTSSGQLYAWGCGAILGCGSAEY------TALRPRLVEDLQSKRMVDIACGDSHVIALTH 706

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           E  VY  +WGN+A      GH   P    P  ++G L+ + V Q++AG  + +A    P+
Sbjct: 707 ESEVY--AWGNNAMGQCGQGHAQSP-ITRPKRVIG-LDGVSVHQVSAGTSHSVAWTALPT 762


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  120 bits (301), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 52/394 (13%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIR-IIQAAAGAGRT 107
            G  H   +T  G +Y++GSN SGQLGHG    +    P+ +   +G   I     G   T
Sbjct: 1130 GWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHT 1189

Query: 108  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            + +     VY++G D FG+  +G +     + P+++E L    +   A G     VL + 
Sbjct: 1190 IAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAGFAHNIVLKKS 1248

Query: 168  GRVYTFSWGNDARLG---HHTE--PNDVEPHPLLGTLENI---PVVQIAAGYCYLLALAC 219
            G +++F +G+  +LG    H++  P  +E + ++G L++     + QIA G+ +  ++ C
Sbjct: 1249 GELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH--SVIC 1306

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              +G  VYS G G  G+LGH    +   PRLIE  + +      ++ G +H         
Sbjct: 1307 SENG-EVYSWGLGKQGQLGHKVFENISKPRLIETLRGV----TKISCGHFHTVATTDLKN 1361

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS----------ED 329
            V +WG G +  LGH +++ ESVPKVV          V  G   T  ++          +D
Sbjct: 1362 VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDD 1421

Query: 330  GD-----------VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE-RVVQ 377
             D           +Y++G  E   LG        G+  +      + T++K VN   ++ 
Sbjct: 1422 EDEENMNGKSSSPIYAWGSAEHGKLGLG------GDLKSPFFDKPIPTAIKGVNSLNLID 1475

Query: 378  ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            IS  +       +  +T +  +Y +G G  GQ+G
Sbjct: 1476 ISCGSDF-----SAMITSNNAIYVWGCGRFGQIG 1504



 Score =  115 bits (288), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 42/329 (12%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            G  H+IAV S   VYS+GS+  GQLGHGT    + RP+ I  L G +I   AAG    ++
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-------VVQAAIGNFFTA 162
            +  +G++++FG   FG+   G   +K + +   + ++           + Q A G   + 
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            + S  G VY++  G   +LGH    N  +P  L+ TL    V +I+ G+ + +A     +
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPR-LIETLRG--VTKISCGHFHTVATTDLKN 1361

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
               VYS G G   KLGH S  DE  P++++ F   N+  VV   G  H   +        
Sbjct: 1362 ---VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVV--CGQNHTMTITFPDDLNN 1416

Query: 275  -GQDGR------------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHV 316
              QD              +  WG   +G LG G +       + +P  ++ +N +  I +
Sbjct: 1417 SNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDI 1476

Query: 317  ATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            + G   + +++ +  +Y +GCG    +G+
Sbjct: 1477 SCGSDFSAMITSNNAIYVWGCGRFGQIGN 1505



 Score =  106 bits (264), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 57/350 (16%)

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVV 152
            + I+ + G     +I+D G++Y +G +  G+  +G++  K ++ P+ V+  +    IF+V
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMV 1182

Query: 153  QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
            +   G    AV   +   + +SWG+D   +LGH T+  +     ++  L    +  IAAG
Sbjct: 1183 ECG-GEHTIAV---DSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAG 1238

Query: 211  YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQP------VV 263
            + + + L  + SG  ++S G G  G+LG GS   +  P  IE   ++  LQ         
Sbjct: 1239 FAHNIVL--KKSG-ELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQ 1295

Query: 264  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            +A G  H+ +  ++G V +WG G+ G LGH   E  S P++++ L  V  I  + G + T
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKI--SCGHFHT 1353

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
               ++  +VYS+G GE   LGH++  D                S+ +V +  +Q +++  
Sbjct: 1354 VATTDLKNVYSWGSGEHMKLGHSSDKD---------------ESVPKVVDFFIQKNVSKV 1398

Query: 384  IYWNAHTFALT---------------------ESGKLYAFGAGDKGQLGI 412
            +    HT  +T                      S  +YA+G+ + G+LG+
Sbjct: 1399 VCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGL 1448



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 41/297 (13%)

Query: 47   QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR------SLQ---GIR 96
            QAIA G  H+I +   G ++SFG    GQLG G+   +  P  I        LQ   G +
Sbjct: 1233 QAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGK 1292

Query: 97   IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
            I Q A G G +++ S+ G+VY++G    G+  + V   + ++ P+L+E+L+   V + + 
Sbjct: 1293 ITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKV--FENISKPRLIETLRG--VTKISC 1348

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
            G+F T   +    VY++  G   +LGH ++ ++  P  +   ++   V ++  G  + + 
Sbjct: 1349 GHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK-NVSKVVCGQNHTMT 1407

Query: 217  LACQ------------------PSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQ 253
            +                      S   +Y+ G    GKLG G        D+  P  I+ 
Sbjct: 1408 ITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKG 1467

Query: 254  FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
               LNL  + ++ G+  +A++  +  +  WG GR+G +G+G  +   VP  + +LND
Sbjct: 1468 VNSLNL--IDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI-SLND 1521



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)

Query: 226  VYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCT 282
            +Y+ G    G+LGHG   ++    P+ ++ F+     P+ +V  G  H   V  +  V +
Sbjct: 1143 LYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR--GKSPIFMVECGGEHTIAVDSNYFVYS 1200

Query: 283  WGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG  ++G LGHG +   +S PKV++ L   K   +A G     V+ + G+++SFG G+  
Sbjct: 1201 WGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFG 1260

Query: 342  SLGHNAIADGQGNRHA-NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LG        G+ H+ N+ T   + ++    +      +T       H+   +E+G++Y
Sbjct: 1261 QLG-------TGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVY 1313

Query: 401  AFGAGDKGQLGIELVNN 417
            ++G G +GQLG ++  N
Sbjct: 1314 SWGLGKQGQLGHKVFEN 1330


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 170/364 (46%), Gaps = 41/364 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A  S G V+++GSN SGQLG GTT     P  ++ L G+  +  AAG   ++ 
Sbjct: 403 AGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGLSGV--VAVAAGFDHSLA 460

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +++G+   G    +LV     V+ L  +  V A  G+  +  +  +G 
Sbjct: 461 LRSDGSVWAWGSNAYGQLGEGTTTNRLVP----VQVLSGVVAVAA--GSNHSLAVRSDGT 514

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+T  WG++   +LG  T  N + P  + G      V  +AAG  + LA+    S   V+
Sbjct: 515 VWT--WGSNLYGQLGDGTTSNRLVPVQVQGLSG---VAAVAAGSFHSLAVHSDGS---VW 566

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G+ ++   P  +          V VAAG +H+ VV  DG V TWG   
Sbjct: 567 AWGSNSSGELGDGTTSNRLVPGRVPGLS----GGVAVAAGGFHSLVVRSDGTVWTWGSNS 622

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G LG G     SVP  VQ L+ V A+    G+  +  V  DG V+++G      LG   
Sbjct: 623 FGELGDGTTTSRSVPVQVQGLSGVVAVDA--GNSHSLAVRSDGTVWTWGYNSYGQLG--- 677

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG   R +    P  V  L  V      +++        H   +   G ++A+G    
Sbjct: 678 --DGTTTRRS---VPVQVPGLSGV------VAMATGAL---HPLVVRSDGTVWAWGYNSF 723

Query: 408 GQLG 411
           GQLG
Sbjct: 724 GQLG 727



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 20/298 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V+++GSN+ GQLG GTT    R  P++ L G+  +  AAG+  ++ 
Sbjct: 453 AGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTN--RLVPVQVLSGV--VAVAAGSNHSLA 508

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G + +G+   G    +LV  P  V+ L  +  V A  G+F +  +  +G 
Sbjct: 509 VRSDGTVWTWGSNLYGQLGDGTTSNRLV--PVQVQGLSGVAAVAA--GSFHSLAVHSDGS 564

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +   LG  T  N + P  + G       V +AAG  + L +    +   V++ 
Sbjct: 565 VWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG---VAVAAGGFHSLVVRSDGT---VWTW 618

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ T    P  ++    +    V V AG  H+  V  DG V TWG+  YG
Sbjct: 619 GSNSFGELGDGTTTSRSVPVQVQGLSGV----VAVDAGNSHSLAVRSDGTVWTWGYNSYG 674

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            LG G     SVP  V  L+ V A+  ATG     VV  DG V+++G      LG+ +
Sbjct: 675 QLGDGTTTRRSVPVQVPGLSGVVAM--ATGALHPLVVRSDGTVWAWGYNSFGQLGNGS 730



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 176/380 (46%), Gaps = 42/380 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+   G V++ GSN  GQLG GTT     P  +  L G  ++  AAG+  ++ 
Sbjct: 53  AGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGLSG--VVAVAAGSSHSLA 110

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G    +L  +P  V+ L    VV  A G+ ++  +  +G 
Sbjct: 111 VRHDGTVWAWGSNSDGQLGDGTTTMRL--TPVRVQGLSG--VVSVAAGSSYSLAVRSDGT 166

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T  N + P  + G      VV +AAG  + LA+    S   V+
Sbjct: 167 VW--AWGSNFSGQLGDGTTSNRLVPVQVPGLSG---VVSVAAGSSHSLAVLSDGS---VW 218

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G++ +   P  +     +       A    H+  V  DG V TWG   
Sbjct: 219 AWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAA----HSLAVRSDGTVWTWGANS 274

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G LG G +    VP  VQ L+ V A  V  G Y +  +  DG V+++G   S  LG   
Sbjct: 275 FGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVWAWGHNSSGQLGD-- 330

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             D   +R   V          QV      +++T     ++H+ A+   G ++A+G+   
Sbjct: 331 --DSSTSRSVPV----------QVRGLSGGMAVTAG---SSHSLAVGSDGTVWAWGSNFS 375

Query: 408 GQLGIELVNNQTERGNPERV 427
           G+ G    NN   R +P +V
Sbjct: 376 GERGEGTTNN---RASPVQV 392



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 169/372 (45%), Gaps = 37/372 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV   G V+++GSNS GQLG GTT     P  ++ L G  ++  AAG+  ++ 
Sbjct: 103 AGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLA 160

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G+   G    +LV  P  V  L  +  V A   +   AVLS +G 
Sbjct: 161 VRSDGTVWAWGSNFSGQLGDGTTSNRLV--PVQVPGLSGVVSVAAGSSHSL-AVLS-DGS 216

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +  +LG  T+ N + P  + G L  +  V   A +    +LA +  G  V++ 
Sbjct: 217 VWAWGANSSGQLGDGTKINRLVPVQVPG-LSGVVAVAAGAAH----SLAVRSDGT-VWTW 270

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA-AGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+++D   P  ++      L  VV +  G++H+  +  DG V  WG    
Sbjct: 271 GANSFGQLGDGTKSDRLVPVRVQ-----GLSGVVASDVGSYHSLALRSDGSVWAWGHNSS 325

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG  +    SVP  V+ L+    + V  G   +  V  DG V+++G   S   G    
Sbjct: 326 GQLGDDSSTSRSVPVQVRGLS--GGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERG---- 379

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            +G  N  A   +P  V  L          +         H+ A    G ++A+G+ D G
Sbjct: 380 -EGTTNNRA---SPVQVQGLGGGVAVAAGFN---------HSLAARSDGSVWAWGSNDSG 426

Query: 409 QLGIELVNNQTE 420
           QLG     N T 
Sbjct: 427 QLGDGTTRNSTS 438



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 166/367 (45%), Gaps = 41/367 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV S G V+++G+NS GQLG GT  +   P  ++ L G+  + +  G+  ++ +   
Sbjct: 257 HSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGV--VASDVGSYHSLALRSD 314

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G +S G+   G   +   + P  V  L     V A  G+  +  +  +G V+  
Sbjct: 315 GSVWAWGHNSSGQ--LGDDSSTSRSVPVQVRGLSGGMAVTA--GSSHSLAVGSDGTVW-- 368

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           +WG++     G  T  N   P  + G       V +AAG+ + LA     S   V++ G 
Sbjct: 369 AWGSNFSGERGEGTTNNRASPVQVQGLGGG---VAVAAGFNHSLAARSDGS---VWAWGS 422

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G+LG G+  +   P  ++    +    V VAAG  H+  +  DG V  WG   YG L
Sbjct: 423 NDSGQLGDGTTRNSTSPVQVQGLSGV----VAVAAGFDHSLALRSDGSVWAWGSNAYGQL 478

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G G      VP  VQ L+ V A  VA G   +  V  DG V+++G      LG     DG
Sbjct: 479 GEGTTTNRLVP--VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLG-----DG 529

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +N L P  V  L  V   V   S         H+ A+   G ++A+G+   G+LG
Sbjct: 530 T---TSNRLVPVQVQGLSGV-AAVAAGSF--------HSLAVHSDGSVWAWGSNSSGELG 577

Query: 412 IELVNNQ 418
               +N+
Sbjct: 578 DGTTSNR 584



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 166/369 (44%), Gaps = 37/369 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V+++G+NSSGQLG GT      P  +  L    ++  AAGA  ++ 
Sbjct: 203 AGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLS--GVVAVAAGAAHSLA 260

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G +SFG+   G +  +LV  P  V+ L    VV + +G++ +  L  +G 
Sbjct: 261 VRSDGTVWTWGANSFGQLGDGTKSDRLV--PVRVQGLSG--VVASDVGSYHSLALRSDGS 316

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +  +LG  +  +   P  + G    + V    AG  + LA+    +   V++ 
Sbjct: 317 VWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVT---AGSSHSLAVGSDGT---VWAW 370

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+ G G+  +   P  ++         V VAAG  H+     DG V  WG    G
Sbjct: 371 GSNFSGERGEGTTNNRASPVQVQGLG----GGVAVAAGFNHSLAARSDGSVWAWGSNDSG 426

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G     + P  VQ L+ V A  VA G   +  +  DG V+++G      LG     
Sbjct: 427 QLGDGTTRNSTSPVQVQGLSGVVA--VAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT- 483

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
                   N L P       QV   VV ++  ++     H+ A+   G ++ +G+   GQ
Sbjct: 484 -------TNRLVP------VQVLSGVVAVAAGSN-----HSLAVRSDGTVWTWGSNLYGQ 525

Query: 410 LGIELVNNQ 418
           LG    +N+
Sbjct: 526 LGDGTTSNR 534



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 28/191 (14%)

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
           VGCGL         TDE   +      L +      +AAG+ ++  +  DG V   G   
Sbjct: 23  VGCGL--------PTDESAEQTSRGAPLRDAPSRARLAAGSSYSLALRPDGTVWATGSND 74

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G     S P  V  L+ V A  VA G   +  V  DG V+++G      LG   
Sbjct: 75  LGQLGDGTTTNHSAPVQVPGLSGVVA--VAAGSSHSLAVRHDGTVWAWGSNSDGQLG--- 129

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG        LTP  V  L      VV ++  +S     ++ A+   G ++A+G+   
Sbjct: 130 --DGTTTMR---LTPVRVQGLSG----VVSVAAGSS-----YSLAVRSDGTVWAWGSNFS 175

Query: 408 GQLGIELVNNQ 418
           GQLG    +N+
Sbjct: 176 GQLGDGTTSNR 186


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 173/349 (49%), Gaps = 26/349 (7%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G N   QLG     +   P    +L  + ++Q A G+     ++  G+VYA G+ + G 
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 184
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+ +  G+D +LGH 
Sbjct: 62  LGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHF 120

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
           +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T 
Sbjct: 121 SRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTT 176

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVP 302
           +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P
Sbjct: 177 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 234

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           + ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  P
Sbjct: 235 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKP 286

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q+V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 287 QVVEGLR--GKKIVHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 328



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 14/298 (4%)

Query: 45  NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
           N   +AG   S+ AVT +G VY+ G  ++G+LG G +      PR I +L    + + A 
Sbjct: 31  NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 90

Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +G    T L  D G+V+ +G+    + + G         P+L+E+LK   +   A G+ 
Sbjct: 91  HSGGRHATALTVD-GKVFWWGEGD--DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 147

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA 
Sbjct: 148 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLAL 206

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G
Sbjct: 207 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 262

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G
Sbjct: 263 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 320



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 5/182 (2%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   +       G  HS A+TS G +Y++G    G+LGHG    + +P+ ++ L G R+
Sbjct: 132 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV 191

Query: 98  IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           IQ A G+   +T+ ++D G V+++G   FG+   G  G++    PQ +E L    V Q  
Sbjct: 192 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIE 249

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + L
Sbjct: 250 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCL 308

Query: 216 AL 217
           A+
Sbjct: 309 AV 310



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 5/92 (5%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           L G+  C+ E      G   S+A+T  GVV+++G     +LGHG+     +P+ +  L+G
Sbjct: 240 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 294

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
            +I+  A GA   + ++D+GQVYA+G +  G+
Sbjct: 295 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 326


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 182/400 (45%), Gaps = 66/400 (16%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWR----------PRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           V +FG N  GQLG G                 P+ +  L G  I+  + G+  TM ++ +
Sbjct: 12  VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-----ESLKNIFVVQAAIGNFFTAVLSREG 168
           G VY++G  S G+  +G    K +  PQ +     E LK  +V   + G   +A ++ +G
Sbjct: 72  GAVYSWGWGSMGQLGHG--DLKSINVPQKIAFFEQEGLKVDYV---SCGGCHSAAVTNDG 126

Query: 169 RVYTFS---WG-----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +Y +    WG      +    H + P      PLL  + +  VV+++ G  +  AL   
Sbjct: 127 TLYMWGETHWGQLGLPKEFEAAHESFPVKC---PLLEGVADESVVKVSCGGTHTAALT-- 181

Query: 221 PSGMAVYSVGCGLGGKLGHGS----RTDEK------HPRLIEQFQLLNLQPVV-VAAGAW 269
            +   VY  G G  G+LG GS     TD+        P L+E F   N + VV VA GA+
Sbjct: 182 -NLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGF---NGEKVVQVACGAF 237

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H+A V + G V  WG   YG LG G    +  PK V+  +D+ A+ V+ G + T VV++ 
Sbjct: 238 HSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKS 297

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           GD Y+FG GE   LG   + D +         P LV +LK   + V+Q +   S     H
Sbjct: 298 GDCYAFGRGEYGRLG---LGDTKSRTR-----PHLVKALK--GQTVIQAACGGS-----H 342

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           T  +T  G  Y  G  D G+LG+    +      P R+D+
Sbjct: 343 TLFVTSDGIAYVAGRPDHGRLGM---TDMKPLSVPTRLDL 379



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 147/310 (47%), Gaps = 22/310 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTM 108
           G  H++A+T+ G VYS+G  S GQLGHG  +    P+ I     +G+++   + G   + 
Sbjct: 61  GSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSA 120

Query: 109 LISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            +++ G +Y +G+  +G+     E+            L+E + +  VV+ + G   TA L
Sbjct: 121 AVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAAL 180

Query: 165 SREGRVYTFSWGNDARLG------HHTEPNDV----EPHPLLGTLENIPVVQIAAGYCYL 214
           +  GRVY +  G+  +LG        T+ N +     PH L+       VVQ+A G  + 
Sbjct: 181 TNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPH-LVEGFNGEKVVQVACGAFHS 239

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            A+  Q     VY  G    G LG G  +D++ P+ +E F   ++  + V+ G WH  VV
Sbjct: 240 AAVTEQGH---VYIWGKEDYGMLGVGQTSDQQTPKRVEFFD--DIPALRVSCGGWHTMVV 294

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            + G    +G G YG LG G+ +  + P +V+AL     I  A G   T  V+ DG  Y 
Sbjct: 295 AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYV 354

Query: 335 FGCGESASLG 344
            G  +   LG
Sbjct: 355 AGRPDHGRLG 364



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS AVT +G VY +G    G LG G T ++  P+ +     I  ++ + G   
Sbjct: 231 QVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWH 290

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           TM+++ +G  YAFG+  +G    G+  TK  T P LV++LK   V+QAA G   T  ++ 
Sbjct: 291 TMVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTS 348

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLAL 217
           +G  Y     +  RLG      D++P   P    L  IPV Q++AG  + +AL
Sbjct: 349 DGIAYVAGRPDHGRLGM----TDMKPLSVPTRLDLGPIPVRQVSAGGAHSMAL 397



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 21/199 (10%)

Query: 225 AVYSVGCGLGGKLGHGSR-------TDEKHPRLIEQF-QLLNLQPVVVAAGAWHAAVVGQ 276
           AV + GC   G+LG G++        D       +Q   LL  + V V+ G+ H   +  
Sbjct: 11  AVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTA 70

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYS 334
            G V +WGWG  G LGHG+ +  +VP+ +       +K  +V+ G   +  V+ DG +Y 
Sbjct: 71  SGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV-NERVVQISLTNSIYWNAHTFAL 393
           +G      LG     +      A+   P     L+ V +E VV++S   +     HT AL
Sbjct: 131 WGETHWGQLGLPKEFEA-----AHESFPVKCPLLEGVADESVVKVSCGGT-----HTAAL 180

Query: 394 TESGKLYAFGAGDKGQLGI 412
           T  G++Y +G GD GQLGI
Sbjct: 181 TNLGRVYVWGRGDSGQLGI 199


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 24/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHT 431

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ +GQ++ FG  +FG   +G +  K V+ P+ +ESLK +  VQAA G + TA +   
Sbjct: 432 AVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 489

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  + + + P  ++  +E  P  Q+A G+   +
Sbjct: 490 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVE--PNCQVACGHSMTV 547

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL+   SG  VY++G  + G+LG+ ++ D K P  +E  +L       +A GA+H AV+ 
Sbjct: 548 ALS--RSGH-VYTMGSCVYGQLGN-TQADGKLPIRVEG-KLSKSFVEEIACGAYHVAVLT 602

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+    + P +V+AL D +   +A G   T  +
Sbjct: 603 SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 164/382 (42%), Gaps = 52/382 (13%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+  GSN       G   +   P+ + S   + +   A G     L++  G+V+++G++S
Sbjct: 287 VHQVGSN------FGVKMDSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEES 340

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDA 179
            G   +GV     V  P+L+ESL N  +   A G + T  ++  G +YT  WG    N  
Sbjct: 341 GGRLGHGVDSD--VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYT--WGDGTYNYG 396

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            LGH  + +   P  + G LE I V  I+ G  +   +    S   +++ G G  G LGH
Sbjct: 397 LLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT---SSGQLFTFGDGTFGALGH 453

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGR 287
           G R     PR IE   L  L+ V  A G WH A V +             G++ TWG G 
Sbjct: 454 GDRKSVSLPREIE--SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 511

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LGHG++E + VP  V  L +     VA G   T  +S  G VY+ G      LG N 
Sbjct: 512 KGRLGHGDKESKLVPTCVVTLVEPNC-QVACGHSMTVALSRSGHVYTMGSCVYGQLG-NT 569

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGD 406
            ADG+         P  V       E  +  S    I   A H   LT   +++ +G G 
Sbjct: 570 QADGK--------LPIRV-------EGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGA 614

Query: 407 KGQLGIELVNNQTERGNPERVD 428
            G+LG    N   +R  P  V+
Sbjct: 615 NGRLGHGDTN---DRNTPTLVE 633



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 184
           + +GV+   L+  P+ +ES   + V   A G    A+++++G V  FSWG ++  RLGH 
Sbjct: 292 SNFGVKMDSLL--PKALESAVVLDVQNIACGGKHAALVTKQGEV--FSWGEESGGRLGHG 347

Query: 185 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
            + +DV PHP L+ +L N  +  +A G  +  A+      +  +  G    G LGHG++ 
Sbjct: 348 VD-SDV-PHPKLIESLSNTNIELVACGEYHTCAVTLS-GDLYTWGDGTYNYGLLGHGNQV 404

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
               P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+
Sbjct: 405 SHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPR 463

Query: 304 VVQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADG 351
            +++L  ++ +  A G + T  V E             G ++++G G+   LGH      
Sbjct: 464 EIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------ 517

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G++ +  L P  V +L + N    Q++  +S+     T AL+ SG +Y  G+   GQLG
Sbjct: 518 -GDKESK-LVPTCVVTLVEPN---CQVACGHSM-----TVALSRSGHVYTMGSCVYGQLG 567

Query: 412 IELVNNQTERGNPERVDIDLS 432
               N Q +   P RV+  LS
Sbjct: 568 ----NTQADGKLPIRVEGKLS 584



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 149/361 (41%), Gaps = 44/361 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR I SL+G+R +QAA G   T  +
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAV 486

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + +KLV  P  V +L      Q A G+
Sbjct: 487 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV--PTCVVTLVEP-NCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  LSR G VYT       +LG +T+ +   P  + G L    V +IA G  ++  L 
Sbjct: 544 SMTVALSRSGHVYTMGSCVYGQLG-NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   V++ G G  G+LGHG   D   P L+E  +   ++ +       AA   H  V
Sbjct: 603 ---SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 659

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+       +   R+ C   G   C S       K   A N  K   V    +
Sbjct: 660 SGVDQSMCSGCRVPFNFKRKRHNCYNCGLVFCHSCSNKKSVKASMAPNPNKPYRVCDNCF 719

Query: 322 TTFVVSEDGD-------VYSFGCGESASLGHNAIADGQGNRHANVLTP-QLVTSLKQVNE 373
                + + D              +  SL  N   D   +R  N L     + SLKQV+ 
Sbjct: 720 NKIRKTTETDSSSQSSMSRRGSLNQGWSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDS 779

Query: 374 R 374
           R
Sbjct: 780 R 780



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 45  NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           N Q   G   ++A++  G VY+ GS   GQLG+   + +   R    L    + + A GA
Sbjct: 536 NCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGA 595

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               +++   +V+ +GK + G   +G   T    +P LVE+LK+  V   A G  FTA +
Sbjct: 596 YHVAVLTSRTEVFTWGKGANGRLGHG--DTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 2978 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 3037

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +
Sbjct: 3038 SGGRLGVGGADSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 3095

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 3096 LGHGNRMSYDRPK-LVEHLNGMNVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 3151

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 3152 DSEDQLRPQLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3209

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++  G+   LGH ++         +
Sbjct: 3210 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSV--------DH 3261

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 3262 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 3307



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ +  + G VY+ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 1870 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 1929

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L++  +   A G+  +A +S
Sbjct: 1930 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAAIS 1987

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G      LA    G +
Sbjct: 1988 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVIQVACGSRDAQTLALTEDG-S 2045

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  + +  GA  +  + + G V TWG 
Sbjct: 2046 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 2103

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 2104 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 2160

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
                 G GN   N   P LV  L  V    V    ++SI W      L E  +
Sbjct: 2161 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNATLEEEKR 2208



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P   +++  +R I  A G+    ++   G+VYA G+ 
Sbjct: 1833 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEG 1892

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 1893 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 1950

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH       +P  L+ TL +  +  +A G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 1951 LGHGNRTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 2006

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
                +  P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 2007 DNATQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEG 2064

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
               P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 2065 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 2116

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  PQ +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2117 VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2162



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G  +    P  + SLQ + + + A  +G    + ++  
Sbjct: 3023 FAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 3082

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 3083 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTW 3140

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 3141 GKGRYGRLGHGDSEDQLRPQ-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 3198

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE    L +  + V  G+  +  + + G V TW  G +  LGH
Sbjct: 3199 YGKLGRGGSDGCKLPYKIESLAGLGV--IKVECGSQFSVALTKSGAVYTWSKGDFHRLGH 3256

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ +    PK V AL   K I +ATG       S+ G+VY++G  +   LG   +   Q 
Sbjct: 3257 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 3315

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 3316 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 3344



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 2081 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 2140

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 2141 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 2190



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+V ++G VY+ G G 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 1893

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 1894 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 1940

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 1941 FSWGEGEDGKLG---HGNRTTLDKPRLVE 1966


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 157/341 (46%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +   A G     L+S  G+V+ +G+ S G   +G+   K VT PQL+ES
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGM--GKDVTGPQLIES 325

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH T+ +   P  + G LE 
Sbjct: 326 LAATSVDFVACGEFHTCAVTMTGEIYT--WGDGTHNAGLLGHGTDVSHWIPKRISGPLEG 383

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   QIA+  C     A   S   +++ G G  G LGHG +    +PR +E   L  L+ 
Sbjct: 384 L---QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVE--SLSGLRT 438

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WHAA + +            G++ TWG G    LGHG++E    P  V AL D
Sbjct: 439 IAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID 498

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G VY+ G      LG N  ADG+         P LV   K 
Sbjct: 499 HTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG-NPNADGK--------LPCLVED-KL 548

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + + V +I+     Y   H   LT   +++ +G G  G+LG
Sbjct: 549 IKDCVEEIAC--GAY---HVAVLTSRNEVFTWGKGANGRLG 584



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 148/290 (51%), Gaps = 22/290 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHGT    W P+ I   L+G++I   + G   T
Sbjct: 337 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 396

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  +FG   +G + T  V  P+ VESL  +  +  A G +  A +   
Sbjct: 397 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 454

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+ +RLGH  + + ++P  +   +++    ++A G+   + 
Sbjct: 455 IVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHT-FHRVACGHSLTVG 513

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   VY++G  + G+LG+ +  D K P L+E  +L+      +A GA+H AV+  
Sbjct: 514 LT---TSGKVYTMGSTVYGQLGNPN-ADGKLPCLVED-KLIKDCVEEIACGAYHVAVLTS 568

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
              V TWG G  G LGHG+ E    P +V  L +    ++A G   T  +
Sbjct: 569 RNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAI 618



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 33/275 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E  + PR + SL G+R I  A G      I
Sbjct: 392 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 451

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           +G+++ +G        +G + ++L   P  V +L +    + A G+ 
Sbjct: 452 VEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL--KPTCVSALIDHTFHRVACGHS 509

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLAL 217
            T  L+  G+VYT       +LG+   PN     P L    L    V +IA G  ++  L
Sbjct: 510 LTVGLTTSGKVYTMGSTVYGQLGN---PNADGKLPCLVEDKLIKDCVEEIACGAYHVAVL 566

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAA 272
               S   V++ G G  G+LGHG   D K P L++  +  +++ +       AA   H  
Sbjct: 567 T---SRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKW 623

Query: 273 VVGQDGRVCT-------WGWGRYGCLGHGNEECES 300
           V G +   C+       +   R+ C   G   C S
Sbjct: 624 VSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 658



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 14/172 (8%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           GSR+D   P+ +E   +L++  +  A G  HAA+V + G V TWG    G LGHG  +  
Sbjct: 260 GSRSDVLIPKPLESNVVLDVHHI--ACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDV 317

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           + P+++++L       VA G++ T  V+  G++Y++G G      HNA   G G   ++ 
Sbjct: 318 TGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGT-----HNAGLLGHGTDVSHW 372

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +  ++   L+      +QI+  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 373 IPKRISGPLEG-----LQIASVSCGPW--HTALITSTGQLFTFGDGTFGVLG 417


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W PR I   L+G++I   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G  + G+LG+ +   +  P L+E  ++ +   + +A G++H AV+  
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACG 410



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 153/341 (44%), Gaps = 40/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    +   A G F T  ++  G +YT  WG    N   LGH T+     P  + G LE 
Sbjct: 126 LAASNIDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDVGHWIPRRISGPLEG 183

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   QIA   C     A   S   +++ G G  G LGHG+      PR +E   L  L+ 
Sbjct: 184 L---QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVE--SLSGLKT 238

Query: 262 VVVAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A     +V Q       G++ TWG G    LGHG++E    P  V +L D
Sbjct: 239 IAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLID 298

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V++ G      LG N  +DG+         P LV   K 
Sbjct: 299 YDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGR---------PCLVED-KI 347

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +E V+QI+       + H   LT   +++ +G G  G+LG
Sbjct: 348 ASEHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 171/366 (46%), Gaps = 41/366 (11%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           G ++S G    G +    T+ +   P+P+ S   + + Q + G     L++  G+V+ +G
Sbjct: 231 GEIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWG 290

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---- 176
           ++S G   +G++     T P+LVESL    +   A G + T  +S  G ++T  WG    
Sbjct: 291 EESGGRLGHGIEDH--FTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFT--WGDGSN 346

Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
           N   LGH T+ +   P  + G LE + V+ IA G  +  ALA   S   +++ G G  G 
Sbjct: 347 NSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACG-TWHSALAT--SNGKLFTFGDGTFGA 403

Query: 237 LGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG------RVCTWGW 285
           LGHG R     P+   + Q LN L+ + VA G WH A    V+ Q G      ++ TWG 
Sbjct: 404 LGHGDRKSVSSPK---ELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGD 460

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G    LGHGN++   +P  V +L D     +A G   T  ++  G V++ G      L  
Sbjct: 461 GDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQL-- 518

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                  GN  +N   P LV   + V E V +IS     Y   HT  LT   +++ +G G
Sbjct: 519 -------GNPSSNGKIPCLVQD-RLVGEFVEEISC--GAY---HTAVLTSRSEVFTWGRG 565

Query: 406 DKGQLG 411
             GQLG
Sbjct: 566 ANGQLG 571



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 161/289 (55%), Gaps = 22/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+++ G ++++G  SN+SG LGHGT    W P+ +   L+G++++  A G   +
Sbjct: 325 GEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHS 384

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
            L +  G+++ FG  +FG   +G +  K V+SP+ ++SL  +  ++ A G + TA    V
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDR--KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEV 442

Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +S+ G      +++T+  G+  RLGH  +   + P   + +L +    Q+A G+   +AL
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPT-CVSSLIDYNFQQLACGHTMTVAL 501

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  V+++G    G+LG+ S ++ K P L+ Q +L+      ++ GA+H AV+   
Sbjct: 502 TT--SGH-VFTMGGSAYGQLGNPS-SNGKIPCLV-QDRLVGEFVEEISCGAYHTAVLTSR 556

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
             V TWG G  G LGHG+ E   +P +V+AL +    +++ G ++T+ +
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSI 605


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 23/307 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ G+N   QLGH    +  RP PI  LQ   +IQ A G+  
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRH 97

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +++ GQ+ ++G +  G+  +      ++  P+++  L +  VVQ A GN  +  L+ 
Sbjct: 98  SMALTEWGQILSWGDNDCGQVGHSTDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALA 218
            G +Y  SWG++   +LG  + P D+ PH   PL L T+  IP+  IA G  + +L++  
Sbjct: 157 CGELY--SWGSNIYGQLGVQS-PKDL-PHSNAPLRLTTILGIPLATIACGGNHSFLIS-- 210

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                 AV+  G    G+LG     +  +P  ++  + L ++   V  G  ++  +  +G
Sbjct: 211 ---KSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEG 265

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
            V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VYSFG 
Sbjct: 266 GVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGL 325

Query: 338 GESASLG 344
           G S  LG
Sbjct: 326 GASGQLG 332



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 169/363 (46%), Gaps = 32/363 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G  S GQLG G  E E    P  I       + Q A G   T+ ++  GQVYA G 
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
           +   +      G +L T  P  +  L+   V+Q A G+  +  L+  G++   SWG++  
Sbjct: 63  NDHHQL-----GHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQI--LSWGDNDC 115

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            ++GH T+ + +E   +L  L +  VVQIA G  + LAL    S   +YS G  + G+LG
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 172

Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
             S  D  H    +    +L +    +A G  H+ ++ +   V  WG    G LG  +E+
Sbjct: 173 VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ 232

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             + P  ++++  +    V  GD  +  ++ +G V++ G G    LGH A          
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGA--------SN 284

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVN 416
           N + P++V  L  +   + Q++  N      HT AL  S G++Y+FG G  GQLG     
Sbjct: 285 NEMIPRMVIEL--MGSTITQVACGNR-----HTLALVPSGGRVYSFGLGASGQLGTRNTI 337

Query: 417 NQT 419
           +QT
Sbjct: 338 SQT 340



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 17/266 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A+T  G + S+G N  GQ+GH T  +    P+ +R L    ++Q A G  
Sbjct: 90  QIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNN 149

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GVQ  K +    +P  + ++  I +   A G   + 
Sbjct: 150 HSLALTSCGELYSWGSNIYGQL--GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSF 207

Query: 163 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           ++S+   V  F WG +   +LG + E N   P   L ++  + V  +  G  Y + L  +
Sbjct: 208 LISKSSAV--FGWGKNTCGQLGLNDEQNRAYPSQ-LKSMRTLGVRFVTCGDEYSVFLTNE 264

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 279
                V++ G G  G+LGHG+  +E  PR++   +L+      VA G  H  A+V   GR
Sbjct: 265 G---GVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGR 319

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVV 305
           V ++G G  G LG  N   +++PKVV
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 14/225 (6%)

Query: 30  VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRP 86
           +LRFL++      R   Q   G  HS+A+TS G +YS+GSN  GQLG  + ++      P
Sbjct: 132 ILRFLVS------RTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAP 185

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
             + ++ GI +   A G   + LIS +  V+ +GK++ G+   G+   +    P  ++S+
Sbjct: 186 LRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL--GLNDEQNRAYPSQLKSM 243

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
           + + V     G+ ++  L+ EG V+T   GN  +LGH    N++ P  ++  + +  + Q
Sbjct: 244 RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGST-ITQ 302

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           +A G  + LAL   PSG  VYS G G  G+LG  +   +  P+++
Sbjct: 303 VACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 3/148 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  ++    V+ +G N+ GQLG    +    P  ++S++ + +     G   ++ +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
           ++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++   GR
Sbjct: 262 TNEGGVFTCGAGNYGQLGHGASNNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGR 319

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           VY+F  G   +LG     +   P  ++G
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVVIG 347



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
           MA+Y  G    G+LG G   +E+   L  Q +     PV  +A G  H   +  +G+V  
Sbjct: 1   MALYCWGDASHGQLGLGGIENEQ-ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            G   +  LGH  E     P  +  L     I +A G   +  ++E G + S+G  +   
Sbjct: 60  CGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           +GH+   D        +  P+++  L  V+  VVQI+  N+     H+ ALT  G+LY++
Sbjct: 118 VGHSTDNDV-------IELPKILRFL--VSRTVVQIACGNN-----HSLALTSCGELYSW 163

Query: 403 GAGDKGQLGIELVNNQTERGNPERV 427
           G+   GQLG++   +      P R+
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRL 188


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 156/353 (44%), Gaps = 42/353 (11%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G G   +   P+ + S   + +   A G     L++  G+V+++G++S G   +GV    
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD- 343

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVE 191
            V  P+L++SL NI +   A G + T  ++  G +YT  WG    N   LGH  E +   
Sbjct: 344 -VLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWV 400

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           P  + G LE I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +
Sbjct: 401 PKRVNGPLEGIHVSSISCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRKSVSIPREV 457

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 299
           E   L  L+ V  A G WH A V +             G++ TWG G  G LGHG++E +
Sbjct: 458 ES--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 515

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  V AL +     VA G   T  ++  G VY+ G      LG N  ADG+       
Sbjct: 516 LVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGK------- 567

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
             P  V       E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 568 -LPNRV-------EGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 612



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 364 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 423

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ +GQ++ FG  +FG   +G +  K V+ P+ VESLK +  V+AA G + TA +   
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 481

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   +
Sbjct: 482 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHSLTV 540

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    SG  VY++G  + G+LG+  + D K P  +E  +L       +A GA+H AV+ 
Sbjct: 541 ALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPNRVEG-RLSKSFVEEIACGAYHVAVLT 595

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V+AL D +   +A G   T  +
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAI 646



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 40/318 (12%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           +GV+   L+  P+ +ES   + V   A G    A+++++G V  FSWG ++  RLGH  +
Sbjct: 286 FGVKLDSLL--PKALESTVVLDVQNIACGGRHAALVTKQGEV--FSWGEESGGRLGHGVD 341

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            + + P  L+ +L NI +  +A G  +  A+      +  +  G    G LGHG+     
Sbjct: 342 SDVLHPK-LIDSLSNINIELVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHW 399

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+ V+
Sbjct: 400 VPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVE 458

Query: 307 ALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGN 354
           +L  ++ +  A G + T  V E             G ++++G G+   LGH       G+
Sbjct: 459 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GD 511

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
           + A  L P  V +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG   
Sbjct: 512 KEAK-LVPTCVAALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG--- 560

Query: 415 VNNQTERGNPERVDIDLS 432
            N Q +   P RV+  LS
Sbjct: 561 -NPQADGKLPNRVEGRLS 577



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 132/313 (42%), Gaps = 35/313 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 478

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV  P  V +L      Q A G+
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 536

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + +   P+ + G L    V +IA G  ++  L 
Sbjct: 537 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLT 595

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA   H  V
Sbjct: 596 ---SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAICLHKWV 652

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+       +   R+ C   G   C S       K   A N  K   V    Y
Sbjct: 653 SGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPFRVCDNCY 712

Query: 322 TTFVVSEDGDVYS 334
           +    + + D  S
Sbjct: 713 SKLRKAIETDASS 725


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 163/337 (48%), Gaps = 26/337 (7%)

Query: 23  CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
           C G W L        L+ ++A    C     R   +   G  HS+ +   G VY+ G N+
Sbjct: 3   CWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNT 62

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
            GQLGH    E  +P  I +L    I+  A G   ++ +SD GQ++++G  S G+   G+
Sbjct: 63  KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQL--GL 118

Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
              +  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+ 
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQ 178

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
             P   + +LE IP+ Q+ AG  +  AL+   SG AV+  G    G+LG     D + P 
Sbjct: 179 ASPQR-VRSLEGIPLAQVVAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            +   +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
              +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
           +G L +  +V +A G  + LAL+ Q     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTIEDSVAVPRLIQK- 133

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              V  G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           LA        ++ G    G+LG G     +  P+ +   + + L  VV  AG  H+  + 
Sbjct: 152 LAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV--AGGAHSFALS 206

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311

Query: 395 ESGKLYAFGAGDKGQLG 411
            SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q  AG  
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 12/258 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++ +G ++S+G+ S GQLG  T E+    PR I+ L    I+Q + G    + 
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQ + +G++S G+   G +      SPQ V SL+ I + Q   G   +  LS  G 
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  +LG   E  D E    +  L    VV I+ G  +   L    SG  V++ 
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
           G G  G+LGH S  DE +PR +   +L+  +   +A G  H  A V   G +  +G G  
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324

Query: 289 GCLGHG---NEECESVPK 303
           G LG G   N +C S  K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q +AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 161/324 (49%), Gaps = 12/324 (3%)

Query: 32  RFLLAGEACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPI 89
           R  L   + C  ++ + +     ++AV T++GVV + G N SGQ G G  +E     RP+
Sbjct: 349 RHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPV 408

Query: 90  RSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           ++L  Q ++ I A+ G    + ++D G  Y++G +  G+  +    TK +  P+L+ESLK
Sbjct: 409 QALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATK-IHVPKLIESLK 467

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           +  +  A++    +AV++  G +YTF   +  +LG     +   P  L+ +LE   V  +
Sbjct: 468 DKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKSLEATEVSMV 526

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  +   + C  +G  +++ G    G+LG       K P L+    L N     VA G
Sbjct: 527 ACGLYH--TIICTAAG-ELFTCGKNDYGQLGLAHNRQIKLPTLV---ALPNEMVSFVACG 580

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            +H+ VV   GR  ++G   YG LG G++  ++VP VV   ++ + +    G Y T ++S
Sbjct: 581 YYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLS 640

Query: 328 EDGDVYSFGCGESASLGHNAIADG 351
           E G VY FG      LG+   AD 
Sbjct: 641 EQGQVYVFGRNNKGQLGNRGSADA 664



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 24/354 (6%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           + G +YS G NS G+LG G   E  +   +       I Q  +G     ++++ G V   
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTC 385

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
           G +  G+   G    + V   + V++L++  +  + A+ G      L+  G  Y++ + +
Sbjct: 386 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             +LGH      +    L+ +L++  +   +  Y +   +        +Y+ G    G+L
Sbjct: 445 RGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVIT---DAGELYTFGMNDCGQL 501

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G      +  P+L++  +   +   +VA G +H  +    G + T G   YG LG  +  
Sbjct: 502 GLDHTQHQSTPQLVKSLEATEVS--MVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNR 559

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
              +P +V   N++ +  VA G Y + VVS  G  +SFG  +   LG  +        H 
Sbjct: 560 QIKLPTLVALPNEMVSF-VACGYYHSVVVSTGGRAFSFGRNDYGQLGIGS------KVHQ 612

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           NV  P +V      N R+V+   T   Y   HT  L+E G++Y FG  +KGQLG
Sbjct: 613 NV--PNVVA--LSSNTRMVRA--TCGCY---HTVLLSEQGQVYVFGRNNKGQLG 657



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)

Query: 113 AGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +G++Y+ G++S+GE   G  ++  +L +    V       + Q   GN   AVL+ EG V
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTS----VSLCGWDDIRQVVSGNETLAVLTNEGVV 382

Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            T       + G  H +   +   P+   L +  V  IAA       +A   +G+A YS 
Sbjct: 383 LTCGLNKSGQCGQGHFDERVMMLRPV-QALRSQRVKFIAASNGCEHMIALTDTGLA-YSW 440

Query: 230 GCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LGH +   + H P+LIE  +   L     +    H+AV+   G + T+G    
Sbjct: 441 GYNDRGQLGHENLATKIHVPKLIESLKDKKLG--FASVSYHHSAVITDAGELYTFGMNDC 498

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HN 346
           G LG  + + +S P++V++L   +   VA G Y T + +  G++++ G  +   LG  HN
Sbjct: 499 GQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN 558

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                       +  P LV    ++      +S     Y+  H+  ++  G+ ++FG  D
Sbjct: 559 R----------QIKLPTLVALPNEM------VSFVACGYY--HSVVVSTGGRAFSFGRND 600

Query: 407 KGQLGI 412
            GQLGI
Sbjct: 601 YGQLGI 606



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 51/209 (24%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS  +T  G +Y+FG N  GQLG   T+ +  P+ ++SL+   +   A G   T++ + A
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAA 539

Query: 114 GQVYAFGKD----------------------------------------------SFGEA 127
           G+++  GK+                                              SFG  
Sbjct: 540 GELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRN 599

Query: 128 EYGVQG--TKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           +YG  G  +K+  + P +V    N  +V+A  G + T +LS +G+VY F   N  +LG+ 
Sbjct: 600 DYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNR 659

Query: 185 TEPNDVEPHPLLGTLENIP--VVQIAAGY 211
              + + P PL    E      V +AAG+
Sbjct: 660 GSADALLPVPLKVRPEKNSRRCVDVAAGF 688



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           C+ SG  +YS G    G+LG G   +      +      +++ VV  +G    AV+  +G
Sbjct: 324 CEASG-ELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVV--SGNETLAVLTNEG 380

Query: 279 RVCTWGWGRYGCLGHGN-EECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSF 335
            V T G  + G  G G+ +E   + + VQAL    VK I  + G      +++ G  YS+
Sbjct: 381 VVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSW 440

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  +   LGH  +A         +  P+L+ SLK        +S         H+  +T+
Sbjct: 441 GYNDRGQLGHENLA-------TKIHVPKLIESLKDKKLGFASVSY-------HHSAVITD 486

Query: 396 SGKLYAFGAGDKGQLGIELVNNQT 419
           +G+LY FG  D GQLG++   +Q+
Sbjct: 487 AGELYTFGMNDCGQLGLDHTQHQS 510



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ V++ G  +SFG N  GQLG G+   +  P  +      R+++A  G   T+L+S+ 
Sbjct: 583 HSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQ 642

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGR 169
           GQVY FG+++ G+         L+  P  V   KN    V  A G + T+++    R
Sbjct: 643 GQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKR 699


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 38/363 (10%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTM 108
            AG  HS+AV S G V+++G+N SG+LG GT  +  RPRP++ +QG+   +  +AG   ++
Sbjct: 744  AGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQ--RPRPVQ-VQGLGSAVAVSAGTNHSL 800

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             +   G V+A+G +S G+   G   T+ V  P  V  L  +  V A  G+  +  L  +G
Sbjct: 801  AVQSDGTVWAWGGNSQGQLGDGTGITRYV--PVRVSGLNGVMAVSA--GSAHSLALRSDG 856

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+ + +    +LG  T    + P  + G      VV IAAG  + LA+    +   V++
Sbjct: 857  TVWAWGYNFYGQLGDATSTQRLVPIQVPGLTG---VVSIAAGTHHSLAVRSDGT---VWA 910

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
             G    G+LG G++     P  +     +    V VAAG +H+  V  +G V  WG+  +
Sbjct: 911  WGYNFYGQLGDGTKIQRSPPVQVPGLAGM----VSVAAGTYHSLAVHSNGTVWAWGYNNH 966

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG G      +P  + + + V A   A  ++ + VV  DG V+ +G   ++ LG  + 
Sbjct: 967  GQLGDGTTTQRLLPVPISSSSGVIA---AAANWHSLVVRTDGTVWGWGSNNASQLGDGST 1023

Query: 349  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            +D        + TP        V   V  IS   +     H+ AL   G ++A+G G+ G
Sbjct: 1024 SD------RKMPTP------SSVPNGVRSISSGAN-----HSLALRSDGTVWAWGFGNSG 1066

Query: 409  QLG 411
            QLG
Sbjct: 1067 QLG 1069



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 39/360 (10%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV+  G V+++G N SG+LG GTT     P  +  L    ++  AAG+  ++ +   
Sbjct: 498 HSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLS--SMVAVAAGSTHSLALRAD 555

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G +S G    G    +L  SP  V  L    VV  A GN ++  +  +G V+ +
Sbjct: 556 GTVWAWGDNSNGALGDGTTLRRL--SPVQVPGLSG--VVALAAGNGYSLAVDAQGSVWAW 611

Query: 174 SWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            +    +LG  T    V P   P L       VV +AAG  + LAL  +  G+A ++ G 
Sbjct: 612 GYNGMGQLGDGTTTPRVTPTQAPALSG-----VVALAAGDSHSLAL--RADGVA-WAWGG 663

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G+LG  +  +   P  +     +    V +AAG  H+ V+  DG   +WG   YG L
Sbjct: 664 NDQGQLGDATTLERSTPAAVPGLAHV----VALAAGNAHSLVLHADGTSSSWGNNAYGQL 719

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G G      VP  V   + +K   VA G   +  V  DG V+++G   S  LG     DG
Sbjct: 720 GDGTSTLHPVPVQVPGPSAMKG--VAAGGSHSLAVRSDGTVWAWGNNGSGELG-----DG 772

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G +      P+ V  ++ +   V   + TN      H+ A+   G ++A+G   +GQLG
Sbjct: 773 TGLQR-----PRPV-QVQGLGSAVAVSAGTN------HSLAVQSDGTVWAWGGNSQGQLG 820



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 171/384 (44%), Gaps = 44/384 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS+ + S G V+++G N+ GQLG GT   +  P  ++SL    ++  A G   
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQH 98

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G V+A+G + FG+   G      V  P  V SL  +  + A  G+  +  L  
Sbjct: 99  SLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVAIAA--GDHHSLALLS 154

Query: 167 EGRVYTFSWGNDARLGHHT---EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +G V+ + +    +LG  T    P  V+   L G      VV ++AG  + LA+    S 
Sbjct: 155 DGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG------VVALSAGSTHSLAVL---SD 205

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V + G    G+LG GS T+   P L+    L  ++ VV  AG +H+  +  DG V  W
Sbjct: 206 GKVKAWGDNYYGQLGDGSSTERWTPVLVS--SLTGVKSVV--AGTFHSLALCSDGTVRAW 261

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G    G LG  +     VP VV  L +V+A+  A G   +  +  DG V ++G  +   +
Sbjct: 262 GENGSGQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGTVRAWGNNDHGQV 319

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G+  I        +  LTP  V  + ++                AH+ A+   G  +A+G
Sbjct: 320 GNGTI--------SQQLTPVQVPGVGRMKSIAAG---------GAHSLAMRADGITWAWG 362

Query: 404 AGDKGQLGIELVNNQTERGNPERV 427
              +GQLG    + Q     P RV
Sbjct: 363 DDSQGQLGDGQSSQQLR---PARV 383



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 23/302 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS+AV S G V+++G NS GQLG GT    + P  +  L G+  +  +AG+  ++ 
Sbjct: 794  AGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAV--SAGSAHSLA 851

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+A+G + +G+        +LV  P  V  L    VV  A G   +  +  +G 
Sbjct: 852  LRSDGTVWAWGYNFYGQLGDATSTQRLV--PIQVPGLTG--VVSIAAGTHHSLAVRSDGT 907

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+ + +    +LG  T+     P  + G      +V +AAG  + LA+    +   V++ 
Sbjct: 908  VWAWGYNFYGQLGDGTKIQRSPPVQVPGLAG---MVSVAAGTYHSLAVHSNGT---VWAW 961

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G    G+LG G+ T    P  I          V+ AA  WH+ VV  DG V  WGWG   
Sbjct: 962  GYNNHGQLGDGTTTQRLLPVPISSS-----SGVIAAAANWHSLVVRTDGTV--WGWGSNN 1014

Query: 290  C--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
               LG G+     +P      N V++I  ++G   +  +  DG V+++G G S  LG   
Sbjct: 1015 ASQLGDGSTSDRKMPTPSSVPNGVRSI--SSGANHSLALRSDGTVWAWGFGNSGQLGDGV 1072

Query: 348  IA 349
            ++
Sbjct: 1073 MS 1074



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 158/363 (43%), Gaps = 37/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++G NS+G LG GTT     P  +  L G  ++  AAG G ++ 
Sbjct: 544 AGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLA 601

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G+   G    ++  +P    +L    VV  A G+  +  L  +G 
Sbjct: 602 VDAQGSVWAWGYNGMGQLGDGTTTPRV--TPTQAPALSG--VVALAAGDSHSLALRADGV 657

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            + +   +  +LG  T      P  + G      VV +AAG  + L L    +     S 
Sbjct: 658 AWAWGGNDQGQLGDATTLERSTPAAVPGLAH---VVALAAGNAHSLVLHADGTS---SSW 711

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ T    P  +     +      VAAG  H+  V  DG V  WG    G
Sbjct: 712 GNNAYGQLGDGTSTLHPVPVQVPGPSAMK----GVAAGGSHSLAVRSDGTVWAWGNNGSG 767

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G       P  VQ L    A+ V+ G   +  V  DG V+++G      LG     
Sbjct: 768 ELGDGTGLQRPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLG----- 820

Query: 350 DGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
           DG G  R+     P  V+ L      V+ +S       +AH+ AL   G ++A+G    G
Sbjct: 821 DGTGITRY----VPVRVSGLNG----VMAVSAG-----SAHSLALRSDGTVWAWGYNFYG 867

Query: 409 QLG 411
           QLG
Sbjct: 868 QLG 870



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 169/367 (46%), Gaps = 45/367 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V ++G N  GQLG G++ E W P  + SL G++ +   AG   ++ 
Sbjct: 194 AGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSV--VAGTFHSLA 251

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V A+G++  G  + G+  T     P +V  L N+  + A  G+  +  L  +G 
Sbjct: 252 LCSDGTVRAWGEN--GSGQLGISSTTRRPVPVVVPGLTNVQALAA--GSAHSLALRSDGT 307

Query: 170 VYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           V   +WGN+   ++G+ T    + P   P +G +++     IAAG  +  +LA +  G+ 
Sbjct: 308 VR--AWGNNDHGQVGNGTISQQLTPVQVPGVGRMKS-----IAAGGAH--SLAMRADGI- 357

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            ++ G    G+LG G  + +  P R++ Q   + L       G  H+  +  DG V  WG
Sbjct: 358 TWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMPL-----GTGNRHSLALHADGTVWAWG 412

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G LG G +   ++P  V  L  V  +   T    +     DG V+++G      LG
Sbjct: 413 VNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATTSH--SLAARADGTVWAWGDNAFGQLG 470

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                DG   +    L P  V  L  V+         +S++   H+ A++  G ++A+G 
Sbjct: 471 -----DGTTTQR---LLPVQVPGLAGVDT-------VSSMH--QHSLAVSRDGTVWAWGF 513

Query: 405 GDKGQLG 411
              G+LG
Sbjct: 514 NGSGRLG 520



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 19/260 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS+A+ S G V+++G N  GQLG  T+ +   P  +  L G+  +  AAG   ++ 
Sbjct: 844  AGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGV--VSIAAGTHHSLA 901

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G V+A+G + +G+      GTK+  SP + V  L  +  V  A G + +  +   G
Sbjct: 902  VRSDGTVWAWGYNFYGQLG---DGTKIQRSPPVQVPGLAGM--VSVAAGTYHSLAVHSNG 956

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             V+ + + N  +LG  T    + P P+     +  V+  AA +  L+    +  G  V+ 
Sbjct: 957  TVWAWGYNNHGQLGDGTTTQRLLPVPIS---SSSGVIAAAANWHSLV---VRTDGT-VWG 1009

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
             G     +LG GS +D K P        +      +++GA H+  +  DG V  WG+G  
Sbjct: 1010 WGSNNASQLGDGSTSDRKMPTPSSVPNGVR----SISSGANHSLALRSDGTVWAWGFGNS 1065

Query: 289  GCLGHGNEECESVPKVVQAL 308
            G LG G      VP  V   
Sbjct: 1066 GQLGDGVMSMRLVPAGVSGF 1085


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 153/285 (53%), Gaps = 24/285 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +YS+G  +++ G LGHG     W P+ +  +L+G+++   + G   T
Sbjct: 137 GEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
            LI+  GQ++ FG  SFG   +G    K V+ P+ VESL  +  +  A G + TA     
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 163 VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           +++R         G+++T+  G+  RLGH  +   ++P   + TL +    ++A G+   
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVATLIDHDFYRVACGHSLT 313

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    SG  V S+G  + G+LG+   +D + P L+E  +++  Q + +A G++H AV+
Sbjct: 314 VALTT--SGQ-VLSMGNAVYGQLGN-PHSDGRIPCLVED-KIVGEQVIQIACGSYHVAVL 368

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
                V TWG G  G LGHG+ E   VP +V+ L D    ++A G
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACG 413



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 151/343 (44%), Gaps = 41/343 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L+   G+V+ +G+DS G   +G +  +    P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +Y  SWG    N   LGH  +     P  + G LE 
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELY--SWGDGTHNVGLLGHGNDVGHWIPKRVSGALEG 183

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V  ++ G  +   +    S   +++ G G  G LGHG      +PR +E   L  L+ 
Sbjct: 184 LQVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVE--SLSGLKT 238

Query: 262 VVVAAGAWHAAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           + VA G WH A + +              G++ TWG G    LGHG++E    P  V  L
Sbjct: 239 IAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATL 298

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     VA G   T  ++  G V S G         NA+    GN H++   P LV   
Sbjct: 299 IDHDFYRVACGHSLTVALTTSGQVLSMG---------NAVYGQLGNPHSDGRIPCLVED- 348

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           K V E+V+QI+       + H   LT   +++ +G G  G+LG
Sbjct: 349 KIVGEQVIQIACG-----SYHVAVLTGRNEVFTWGKGANGRLG 386


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 166/341 (48%), Gaps = 20/341 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 108
           AG   + AV S G V + G  S G+LG+G +     P  I     +R I  + G+ G +M
Sbjct: 168 AGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSM 227

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            I   GQ++ +G   +G+  +G   T+   SP+L+E+L +  +V A  G+  +A +   G
Sbjct: 228 AIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDADCGHRHSAAVCDAG 285

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +Y +  G+  RLG         P  +    E     Q+  G+ + + L+    G  V+S
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTD--GRTVWS 340

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    GKLGHG    +  P++I+  Q L +    +AAG   +A V ++G +  WG+G  
Sbjct: 341 FGAAENGKLGHGDTNRQFRPKIIDALQGLTI--TQIAAGTQISAAVTREGALYVWGFGP- 397

Query: 289 GCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            CLG+G ++E   +PKVV+ L+    I +A G+     +++DG V+++G  ++       
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQC---- 452

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              G G+  A   +PQ+V  L     + V    T++  W+A
Sbjct: 453 ---GTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVWSA 490



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 35/353 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           V+ +GSNSS QL   T E++   PR + S+ G +++   AG   T  +   G V A GK 
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNL-SVYG-KVMSITAGQYCTFAVLSNGTVMANGKG 188

Query: 123 SFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           S+G    G   +   +SP L+E    ++ I   + + G+  +  + + G+++T+  G+  
Sbjct: 189 SYGRLGNGA--SASSSSPILIEFPAPVRKILTSKGSDGH--SMAIGKNGQIWTWGDGDYG 244

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH        P  L+  L +  +V    G+ +  A+ C    +  Y  G G  G+LG 
Sbjct: 245 KLGHGDSTTQKSPK-LIEALASRVIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGL 300

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 298
           G       P  +   +    +   V  G  H  V+  DGR V ++G    G LGHG+   
Sbjct: 301 GDALQRSVPVQVPDIR----EASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNR 356

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           +  PK++ AL  +    +A G   +  V+ +G +Y +G G            G G+    
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCL---------GNGSSDET 407

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            + P++V  L      V+ I++  +     H  ALT+ G ++ +G    GQ G
Sbjct: 408 FMLPKVVRGLS--GRVVIDIAIGEN-----HVVALTKDGLVFTWGNNQNGQCG 453



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 32/252 (12%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAG-YCYLLALACQPSGMAVY 227
           F WG+++      +  D  P   L    N+     V+ I AG YC    L    S   V 
Sbjct: 132 FCWGSNSS----QQLTDATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVL----SNGTVM 183

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G  G+LG+G+      P LIE F     + +       H+  +G++G++ TWG G 
Sbjct: 184 ANGKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGD 242

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LGHG+   +  PK+++AL     +    G   +  V + G +Y +G G+   LG   
Sbjct: 243 YGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG--- 299

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGD 406
           + D           P  V  +++ ++ V   +         HT  L+  G+ +++FGA +
Sbjct: 300 LGDALQRS-----VPVQVPDIREASQVVCGFN---------HTVVLSTDGRTVWSFGAAE 345

Query: 407 KGQLGIELVNNQ 418
            G+LG    N Q
Sbjct: 346 NGKLGHGDTNRQ 357



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 13/238 (5%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   R    A  G  HS AV   G +Y +G    G+LG G   +  R  P++       
Sbjct: 261 EALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ--RSVPVQVPDIREA 318

Query: 98  IQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
            Q   G   T+++S  G+ V++FG    G+  +G   T     P+++++L+ + + Q A 
Sbjct: 319 SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG--DTNRQFRPKIIDALQGLTITQIAA 376

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +A ++REG +Y   WG    LG+ +         ++  L    V+ IA G  +++A
Sbjct: 377 GTQISAAVTREGALYV--WGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVA 434

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           L     G+ V++ G    G+ G GS       P++++      +Q V   AG  H  V
Sbjct: 435 LT--KDGL-VFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVT--AGTTHTFV 487



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H +A+T  G+V+++G+N +GQ G G+    +  P+ ++ L G  I Q  AG   T +
Sbjct: 428 GENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487

Query: 110 ISDA 113
            S A
Sbjct: 488 WSAA 491


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 159/301 (52%), Gaps = 21/301 (6%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+ A+T+ G +Y++G  ++++G LGHG+    W P+ +   L+G+++   
Sbjct: 339 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 398

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   T LI+ +G++Y FG  +FG   +G + T  ++ P+ VESLK +  +  + G + 
Sbjct: 399 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 456

Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           TA +         +  G+++T+  G+  RLGH    + ++P   + +L +    +   G+
Sbjct: 457 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 515

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
              + L    SG  +++ G  + G+LG+ +  D ++PRL+E+ +L     V V  GA+H 
Sbjct: 516 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVVCGAYHV 570

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
           AV+ Q G V TWG G  G LGHG+      P  V+AL D     +A G   T  + +   
Sbjct: 571 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKS 630

Query: 332 V 332
           V
Sbjct: 631 V 631



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 151/339 (44%), Gaps = 37/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +   A G     L++   +V+ +G++  G   +G  GT +   P+LVES
Sbjct: 277 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 334

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH +  +   P  + G LE 
Sbjct: 335 LSICNVETIACGEFHTCAITATGDLYT--WGDGTHNAGLLGHGSNVSHWIPKRVSGPLEG 392

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   Q++A  C     A   S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ 
Sbjct: 393 L---QVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVES--LKGLRT 447

Query: 262 VVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           + V+ G WH A V +          G++ TWG G    LGHG+   +  P  V +L D  
Sbjct: 448 ISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYN 507

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
                 G   T  ++  G +++ G      LG N   DG+         P+LV       
Sbjct: 508 FHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNNDGR--------YPRLV------E 552

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E++    +   +    H   LT+SG++Y +G G  G+LG
Sbjct: 553 EKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLG 591



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 31/294 (10%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           Y       +  P+ +ES   + V   A G    A+++R+  V  F+WG +   RLGH   
Sbjct: 266 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 323

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            +  +P  L+ +L    V  IA G  +  A+      +  +  G    G LGHGS     
Sbjct: 324 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 381

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  LQ   V+ G WH A++   G++ T+G G +G LGHGN E  S PK V+
Sbjct: 382 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 440

Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 357
           +L  ++ I V+ G + T  V E          G ++++G G+   LGH       G+R +
Sbjct: 441 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH-------GDR-S 492

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + L P  V SL       +  +   ++  +  T  LT SG ++  G+   GQLG
Sbjct: 493 SKLKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG 539


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             +Y +G N  GQLG         P P  +L  +R +Q A G      ++  G+++A G  
Sbjct: 4215 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4274

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            S G    G   +  +  P L+ SL+++FV + A+  G      L+ +G VY +  G D +
Sbjct: 4275 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4332

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG
Sbjct: 4333 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4388

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
               D+  P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  + 
Sbjct: 4389 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4446

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
              +P  +++L  +  I V  G   +  +++ G VY++G G+   LGH ++         +
Sbjct: 4447 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------EH 4498

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  P+ V +L+   ++++ I+ T S+    H  A +++G+++ +G  D+GQLG
Sbjct: 4499 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAGEVFTWGDNDEGQLG 4544



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 17/353 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ V S+ G VY+ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 3099 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3158

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   A G+  +A +S
Sbjct: 3159 HALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3216

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G      LA    G A
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALSGRRVIQVACGSRDAQTLALTEDG-A 3274

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  + +  GA  +  + + G V TWG 
Sbjct: 3275 VFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3332

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3389

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
                 G GN   N   P LV  L  V    V    ++S+ W     +L E  +
Sbjct: 3390 ----QGSGNTFVNK-KPALVIGLDAVIVNRVACGSSHSMAWGLPNASLDEEKR 3437



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 27/353 (7%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             V  +G N   QLG     +   P    ++  +R I  A G+    ++S  G+VYA G+ 
Sbjct: 3062 TVMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3121

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            + G    GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +
Sbjct: 3122 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH       +P  L+  L    +  IA G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 3180 LGHGNRSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3235

Query: 241  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
                +  P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 3236 DNATQLKPKLVAA--LSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3293

Query: 299  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             S P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 3294 SSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3345

Query: 359  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  PQ +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3346 VRKPQPIAGLR--GHRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3391



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
             AVT  G +++ G  S G+LG G ++    P  + SLQ + + + A  +G    + ++  
Sbjct: 4260 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4319

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+VYA+G+   G+  +G + +     P+LVE L  + V   A G+  +A ++  G V T+
Sbjct: 4320 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4377

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              G   RLGH    + + P  L+  L     + IA G      L C      V+S G G 
Sbjct: 4378 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4435

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             GKLG G     K P  IE   L  L  + V  G+  +  + + G V TWG G +  LGH
Sbjct: 4436 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4493

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G+ E    PK V AL   K I +ATG       S+ G+V+++G  +   LG   +   Q 
Sbjct: 4494 GSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQ- 4552

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                    P+LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4553 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4581



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 27/257 (10%)

Query: 157 GNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           G  F AV   +     +SWG  +  RLGH     D     L   +E++ V  + + YC  
Sbjct: 655 GRHFLAV---DSNFNAYSWGVGDSRRLGH----GDCHARELPTKIESL-VRLVKSVYCGC 706

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
              A    G  +Y+ G G  G+LGHG+  D+  P ++   +   +  V + +G  H   +
Sbjct: 707 SYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCL 766

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             +G V  WG G YG LG+G+     +P+++  L  V+   V  G   +  +S +G +YS
Sbjct: 767 TSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQ--RVFAGAQFSLALSCEGQLYS 824

Query: 335 FGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           +  G+++ LGH  +  + QG        P+L+T L+  ++R+V +++       AH  AL
Sbjct: 825 W--GKASCLGHQLVERNVQGCS-----VPRLITGLQ--HKRIVDVAVG-----VAHCLAL 870

Query: 394 TESGKLYAFGAGDKGQL 410
           + SG+++ +G  D  Q+
Sbjct: 871 SSSGEIFGWGRNDNQQI 887



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 122/274 (44%), Gaps = 42/274 (15%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGY 211
           Q A       +LS+EG++Y +          H    + EP  L    + N   + IAA +
Sbjct: 604 QVACSEDVVLLLSKEGKLYNW----------HIAKPEAEPQQLDFAEIANETFISIAA-H 652

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
           C         S    YS G G   +LGHG     + P  IE    L      V  G  ++
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRLVKS---VYCGCSYS 709

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSED 329
           A +   G + TWG G YG LGHG  + + +P +V AL D + + VA  +GD  T  ++ +
Sbjct: 710 AAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSIYW 386
           G V+++G G+   LG     +G  N   + L PQL+  L +V +RV    Q SL      
Sbjct: 770 GLVFAWGDGDYGKLG-----NGSCN---SSLLPQLIDCLPRV-QRVFAGAQFSL------ 814

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
                AL+  G+LY++G      LG +LV    +
Sbjct: 815 -----ALSCEGQLYSWGKASC--LGHQLVERNVQ 841



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 98/174 (56%), Gaps = 13/174 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G +Y++G  + G+LGHGT++++  P  + +L+  +++  A G+G   T+
Sbjct: 705 GCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTL 764

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G V+A+G   +G+   G   + L+  PQL++ L  +  V A  G  F+  LS EG
Sbjct: 765 CLTSEGLVFAWGDGDYGKLGNGSCNSSLL--PQLIDCLPRVQRVFA--GAQFSLALSCEG 820

Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
           ++Y  SWG  + LGH     +V+    P  + G L++  +V +A G  + LAL+
Sbjct: 821 QLY--SWGKASCLGHQLVERNVQGCSVPRLITG-LQHKRIVDVAVGVAHCLALS 871



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 17/238 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 112
           H +AV S    YS+G   S +LGHG       P  I SL  +R++++   G   +  I+ 
Sbjct: 657 HFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITL 714

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
            G +Y +G+ ++G   +G    + +  P +V +LK+  VV  A+  G+  T  L+ EG V
Sbjct: 715 GGNLYTWGRGTYGRLGHGTSDDQCL--PAMVMALKDHQVVDVALGSGDAHTLCLTSEGLV 772

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 229
           + +  G+  +LG+ +  + + P      ++ +P VQ + AG  + LAL+C+    +    
Sbjct: 773 FAWGDGDYGKLGNGSCNSSLLPQ----LIDCLPRVQRVFAGAQFSLALSCEGQLYSWGKA 828

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            C LG +L   +      PRLI   Q  + + V VA G  H   +   G +  +GWGR
Sbjct: 829 SC-LGHQLVERNVQGCSVPRLITGLQ--HKRIVDVAVGVAHCLALSSSGEI--FGWGR 881



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 3310 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALH 3369

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  + V + A G+
Sbjct: 3370 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVIVNRVACGS 3419



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 19/168 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H++ +TS+G+V+++G    G+LG+G+      P+ I  L   R+ +  AGA  ++ 
Sbjct: 758 SGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLP--RVQRVFAGAQFSLA 815

Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +S  GQ+Y++GK S  G    E  VQG  +   P+L+  L++  +V  A+G      LS 
Sbjct: 816 LSCEGQLYSWGKASCLGHQLVERNVQGCSV---PRLITGLQHKRIVDVAVGVAHCLALSS 872

Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLG-----TLENIPVVQIA 208
            G +  F WG ND        P  V   PLL      TL  +P   IA
Sbjct: 873 SGEI--FGWGRND---NQQICPASVCSEPLLRQPIQVTLPTLPASGIA 915


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 148/283 (52%), Gaps = 23/283 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W PR I  +L+G+++   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   + P   + +L +    ++A G+   + 
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNP-TCVASLIDYDFYRVACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G  + G+LG+ +   +  P L+   ++ N   + VA G++H +V+  
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVGD-KITNEHVLQVACGSYHVSVLTS 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E + VP +V+AL D    H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACG 410



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 158/348 (45%), Gaps = 40/348 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++ +G+V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    +   A G F T  ++  G +YT  WG    N   LGH T+     P  + G LE 
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDVGHWIPRRISGALEG 183

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V  ++ G  +   +    S   +++ G G  G LGHG+      PR +E   L  L+ 
Sbjct: 184 LQVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNVKSISCPREVE--SLSGLKT 238

Query: 262 VVVAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A     +V Q       G++ TWG G    LGHG++E    P  V +L D
Sbjct: 239 IAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLID 298

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V++ G      LG N  +DG+         P LV   K 
Sbjct: 299 YDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGR---------PCLVGD-KI 347

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            NE V+Q++       + H   LT   +++ +G G  G+LG   + +Q
Sbjct: 348 TNEHVLQVACG-----SYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQ 390



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%)

Query: 32  RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
           R  L G+        Q   G  H   +TS+  V+++G  ++G+LGHG  E++  P  + +
Sbjct: 339 RPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEA 398

Query: 92  LQGIRIIQAAAGAGRTMLI 110
           L+   +   A GA  T  I
Sbjct: 399 LKDRSVRHIACGANFTAAI 417


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W PR I   L+G++I   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G  + G+LG  +   +  P L+E  ++ +   + +A G++H AV+  
Sbjct: 314 LT---TSGKVWTMGNSVYGQLG--NLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    +   A G F T  ++  G +YT+  G  N   LGH T+     P  + G LE + 
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             QIA   C     A   S   +++ G G  G LGHG       PR +E   L  L+ + 
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240

Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A     +V Q       G++ TWG G    LGHG++E    P  V +L D  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   T  ++  G V++ G      LG N  +DG+         P LV   K  +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIAS 349

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V+QI+       + H   LT   +++ +G G  G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 23/297 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSF--GSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQA 100
           N++ +A G  HS AVT  G ++++  G++S G LGHG     W P+ +   L+GIR+   
Sbjct: 360 NTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSV 419

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   T L++ AGQ++ FG  +FG   +G +  + V  P+ VESLK +  V+ A G + 
Sbjct: 420 ACGVWHTALVTSAGQLFTFGDGTFGVLGHGDK--RSVALPKEVESLKGLKTVRVACGVWH 477

Query: 161 TAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           TA +              G+++T+  G+  RLGH  +   + P   +  L +    Q+A 
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPT-CVAALVDYNFKQVAC 536

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G+   +AL        V+++G  L G+LG   R D K P L+E  +L       +A GA+
Sbjct: 537 GHTLTVALTIN---GRVFTMGSSLYGQLGD-VRADGKLPGLVEG-RLWEAFVEEIACGAY 591

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           H AV+     V TWG G  G LGHG+    + P +V+AL + +   VA G   T  +
Sbjct: 592 HVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAI 648



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 159/365 (43%), Gaps = 40/365 (10%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G V+ +G  S G    G   +   P+ + S   + +   A G     L++  G+V+ +G 
Sbjct: 275 GDVFLWG-ESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGD 333

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 180
           +S G   +GV     V  P+LVE+L        A G + +  ++  G ++T  WG+    
Sbjct: 334 ESGGRLGHGVDVD--VAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFT--WGDGTHS 389

Query: 181 ---LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
              LGH  + +   P  + G LE I V  +A   C +   A   S   +++ G G  G L
Sbjct: 390 YGLLGHGNDISHWTPKRVGGPLEGIRVSSVA---CGVWHTALVTSAGQLFTFGDGTFGVL 446

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWG 286
           GHG +     P+ +E  +   L+ V VA G WH A V           G  G++ TWG G
Sbjct: 447 GHGDKRSVALPKEVESLK--GLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDG 504

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LGHG++E + VP  V AL D     VA G   T  ++ +G V++ G      LG +
Sbjct: 505 DKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLG-D 563

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
             ADG+         P LV        R+ +  +        H   LT   ++Y +G G 
Sbjct: 564 VRADGK--------LPGLVEG------RLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGA 609

Query: 407 KGQLG 411
            G+LG
Sbjct: 610 NGRLG 614



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+  VTS G +++FG  + G LGHG       P+ + SL+G++ ++ A G  
Sbjct: 417 SSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVW 476

Query: 106 RTMLISD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            T  + +           +G+++ +G    G   +G +  KLV  P  V +L +    Q 
Sbjct: 477 HTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV--PTCVAALVDYNFKQV 534

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           A G+  T  L+  GRV+T       +LG     +   P  + G L    V +IA G  ++
Sbjct: 535 ACGHTLTVALTINGRVFTMGSSLYGQLG-DVRADGKLPGLVEGRLWEAFVEEIACGAYHV 593

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AW 269
             L  +     VY+ G G  G+LGHG   D   P L+E  +   ++ V   +G       
Sbjct: 594 AVLTAK---TEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAICL 650

Query: 270 HAAVVGQDGRVCT-------WGWGRYGCLGHGNEECES 300
           H  V G D  +C+       +   R+ C   G+  C S
Sbjct: 651 HKWVSGADQSLCSGCRQPFGFTRKRHNCYNCGHAFCHS 688


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
           G  HS AVT  G +Y++G    G LGHG     W P+ +  L +GI +   A G   T +
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
           ++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  V+AA G + TA +     
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 472

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                     G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   +AL
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 531

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  VY++G  + G+LG+ S  D K P  +E  +L       +A GA+H AV+   
Sbjct: 532 TT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 586

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             V TWG G  G LGHG+ +  + P +V++L D +   +A G   T  V
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 635



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 158/356 (44%), Gaps = 39/356 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+ +++G++S G   +GV     +  P+L+++
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDA 343

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L    +   A G F +  ++  G +YT+  G+   LGH  E +   P  +   LE I V 
Sbjct: 344 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 403

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            IA G  +   +    S   +++ G G  G LGHG +     PR ++   L  L+ V  A
Sbjct: 404 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 458

Query: 266 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            G WH A V +             G++ TWG G  G LGHGN+E + VP  V AL +   
Sbjct: 459 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 518

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             VA G   T  ++  G VY+ G      L         GN HA+  TP  V       E
Sbjct: 519 CQVACGHSLTVALTTSGHVYTMGSPVYGQL---------GNSHADGKTPNRV-------E 562

Query: 374 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             +  S    I   A H   LT   ++Y +G G  G+LG   V+   +R +P  V+
Sbjct: 563 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD---DRNSPTLVE 615



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 29/363 (7%)

Query: 21  QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 78
           ++ G S+ + +  LL  A E+    +      G  H++ VT +G  +S+G  S G+LGHG
Sbjct: 271 RRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 330

Query: 79  TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
                 +P+ I +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V 
Sbjct: 331 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 389

Query: 139 SPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
            P+ V   L+ I V   A G + TAV++  G+++TF  G    LGH  + +   P   + 
Sbjct: 390 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VD 447

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 248
           +L+ +  V+ A G  +  A+     G           +++ G G  G+LGHG+    K P
Sbjct: 448 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEP 503

Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           +L+       ++P        H+  V     G V T G   YG LG+ + + ++  +V  
Sbjct: 504 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 563

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
            L+      +A G Y   V++   +VY++G G +  LGH  + D          +P LV 
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVE 615

Query: 367 SLK 369
           SLK
Sbjct: 616 SLK 618



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 31/258 (12%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG  +  + PR + SL+G+R ++AA G  
Sbjct: 403 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 462

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G    G   +G +  KLV  P  V +L      Q
Sbjct: 463 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 520

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTE---PNDVEPHPLLGTLENIPVVQIAA 209
            A G+  T  L+  G VYT       +LG+ H +   PN VE     G L    V +IA 
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVE-----GKLHKSFVEEIAC 575

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----V 264
           G  ++  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       
Sbjct: 576 GAYHVAVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 632

Query: 265 AAGAWHAAVVGQDGRVCT 282
           AA   H    G D  +C+
Sbjct: 633 AAVCIHRWASGMDQSMCS 650



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 280 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 337

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PK++ ALN      VA G++ +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 338 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 390

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 391 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 433


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 23/292 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W P+ I  +L+G ++   + G   T
Sbjct: 152 GEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHT 211

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  GQ++ FG  +FG   +G + +  +  P+ VESL  +  +  A G + TA +   
Sbjct: 212 ALITSTGQLFTFGDGTFGVLGHGNRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEV 269

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   V+P   + +L +    +IA G+   + 
Sbjct: 270 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKP-TCVASLIDYDFHRIACGHSLTVG 328

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V+ +G  + G+LG+  R+D K P L+E     N+  V VA G++H AV+  
Sbjct: 329 LTT--SGQ-VWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENV--VQVACGSYHVAVLTV 382

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
              V TWG G  G LGHG+ E   +P +V+ L D    H+A G   T  + +
Sbjct: 383 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAICQ 434



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 151/339 (44%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G++S G   +G +   +   P LVES
Sbjct: 83  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSLVES 140

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G +YT+  G  N   LGH T+ +   P  + G LE   
Sbjct: 141 LAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQ 200

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  ++ G  +   +    S   +++ G G  G LGHG+R     PR +E   L  L+ + 
Sbjct: 201 VAYVSCGTWHTALIT---STGQLFTFGDGTFGVLGHGNRESIPCPREVE--SLSGLKTIA 255

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E    P  V +L D  
Sbjct: 256 VACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYD 315

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G V+  G         N +    GN  ++   P LV  +  + 
Sbjct: 316 FHRIACGHSLTVGLTTSGQVWGMG---------NTVYGQLGNPRSDGKLPCLVEDI--MG 364

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 365 ENVVQVACG-----SYHVAVLTVKSEVFTWGKGANGRLG 398


>gi|269793990|ref|YP_003313445.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Sanguibacter keddieii DSM 10542]
 gi|269096175|gb|ACZ20611.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Sanguibacter keddieii DSM 10542]
          Length = 900

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 147/313 (46%), Gaps = 16/313 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQA-AAG- 103
           Q  AGP HS+A+   G VY++GS +SGQLGHG+ E    P R    L G R++Q  AAG 
Sbjct: 107 QVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGT 166

Query: 104 --AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
             A  ++ + D G VY +G++  G A + V+   L     L  +L+    V+ A G+   
Sbjct: 167 DDASTSLAVVDDGTVYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTG 226

Query: 162 AVLSREGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             L+ +GR   F+WG   N A     T    + P P++G         + AG        
Sbjct: 227 VALTADGR--AFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAV 284

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQ 276
               G A Y  G G  G LG G   +   P L  +E    L ++PV + +G   + V+G 
Sbjct: 285 IDDDGRA-YGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQITSGQNFSVVLGA 343

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA---LNDVKAIHVATGDYTTFVVSEDGDVY 333
           DGR+  WG G  G LG+G          V     L+ V+ +HV+ G   T  +  DG VY
Sbjct: 344 DGRLAAWGNGTGGQLGNGASATSWHAVAVGTDGVLDGVEVVHVSAGQRHTVALGRDGQVY 403

Query: 334 SFGCGESASLGHN 346
           ++G G S  LG+ 
Sbjct: 404 AWGQGLSGELGNG 416



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 187/387 (48%), Gaps = 33/387 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR---SLQGIRIIQAAAGAGR 106
           AG  HS+ V   G V+++G+N+SGQLG GTT     P P+    +L G+R++Q AAG   
Sbjct: 55  AGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAAGPEH 114

Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ ++D G VYA+G  + G+  +G V+G+ +          + +  V+AA  +  +  L+
Sbjct: 115 SLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDASTSLA 174

Query: 166 --REGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
              +G VYT+      R GH  E   + EP  L G LE    V++AAG+   +AL     
Sbjct: 175 VVDDGTVYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALTAD-- 232

Query: 223 GMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           G A ++ G  + G +G G  S        ++    L   + V   +G    AV+  DGR 
Sbjct: 233 GRA-FAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAVIDDDGRA 291

Query: 281 CTWGWGRYGCLGHGNEECESVPKV--VQALND--VKAIHVATGDYTTFVVSEDGDVYSFG 336
             WG G +G LG G       P +  ++AL+   ++ + + +G   + V+  DG + ++G
Sbjct: 292 YGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQITSGQNFSVVLGADGRLAAWG 351

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
            G    LG+ A A    + HA  +    V  L  V   VV +S         HT AL   
Sbjct: 352 NGTGGQLGNGASAT---SWHAVAVGTDGV--LDGVE--VVHVSAGQR-----HTVALGRD 399

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERGN 423
           G++YA+G G  G+LG     N T RG+
Sbjct: 400 GQVYAWGQGLSGELG-----NGTGRGS 421



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 142/322 (44%), Gaps = 23/322 (7%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
           + AAG   ++L+   G+V+A+G ++ G+   G  G  LV  P  V+ +L  + VVQ A G
Sbjct: 52  RVAAGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAAG 111

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC--YLL 215
              +  L+ +G VY +  G   +LGH +      P  + G L+   VVQ+ A        
Sbjct: 112 PEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDAST 171

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           +LA    G  VY+ G  LGG+ GH                L   + V VAAG      + 
Sbjct: 172 SLAVVDDGT-VYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALT 230

Query: 276 QDGRVCTWGWGRYGCLGHG-NEECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGD 331
            DGR   WG    G +G G     +  P  V    AL+  + +   +G   T V+ +DG 
Sbjct: 231 ADGRAFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAVIDDDGR 290

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAH 389
            Y +G G+  +LG            AN  TP L  + +L Q+  R VQI+   +      
Sbjct: 291 AYGWGAGDHGALGTGGT--------ANAPTPVLADMEALDQLGIRPVQITSGQNF----- 337

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           +  L   G+L A+G G  GQLG
Sbjct: 338 SVVLGADGRLAAWGNGTGGQLG 359


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 23/307 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ G+N   QLGH    +  RP PI  LQ   +IQ A G+  
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRH 97

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +++ GQ+ ++G +  G+  +      ++  P+++  L +  VVQ A GN  +  L+ 
Sbjct: 98  SMALTEWGQILSWGDNDCGQVGHSTDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALA 218
            G +Y  SWG++   +LG  + P D+ PH   PL L T+  IP+  IA G  + +L++  
Sbjct: 157 CGELY--SWGSNIYGQLGVQS-PKDL-PHSNAPLRLTTILGIPLATIACGGNHSFLIS-- 210

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                 AV+  G    G+LG     +  +P  ++  + L ++   V  G  ++  +  +G
Sbjct: 211 ---KSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEG 265

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
            V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VYSFG 
Sbjct: 266 GVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGL 325

Query: 338 GESASLG 344
           G S  LG
Sbjct: 326 GASGQLG 332



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 32/363 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G  S GQLG G  E E    P  I       + Q A G   T+ ++  GQVYA G 
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
           +   +      G +L T  P  +  L+   V+Q A G+  +  L+  G++   SWG++  
Sbjct: 63  NDHHQL-----GHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQI--LSWGDNDC 115

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            ++GH T+ + +E   +L  L +  VVQIA G  + LAL    S   +YS G  + G+LG
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 172

Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
             S  D  H    +    +L +    +A G  H+ ++ +   V  WG    G LG  +E+
Sbjct: 173 VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ 232

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             + P  ++++  +    V  GD  +  ++ +G V++ G G    LGH     G  N   
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGH-----GVSN--- 284

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVN 416
           N + P++V  L  +   + Q++  N      HT AL  S G++Y+FG G  GQLG     
Sbjct: 285 NEMIPRMVIEL--MGSTITQVACGNR-----HTLALVPSGGRVYSFGLGASGQLGTRNTI 337

Query: 417 NQT 419
           +QT
Sbjct: 338 SQT 340



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 17/266 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A+T  G + S+G N  GQ+GH T  +    P+ +R L    ++Q A G  
Sbjct: 90  QIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNN 149

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GVQ  K +    +P  + ++  I +   A G   + 
Sbjct: 150 HSLALTSCGELYSWGSNIYGQL--GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSF 207

Query: 163 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           ++S+   V  F WG +   +LG + E N   P   L ++  + V  +  G  Y + L  +
Sbjct: 208 LISKSSAV--FGWGKNTCGQLGLNDEQNRAYPSQ-LKSMRTLGVRFVTCGDEYSVFLTNE 264

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 279
                V++ G G  G+LGHG   +E  PR++   +L+      VA G  H  A+V   GR
Sbjct: 265 G---GVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGR 319

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVV 305
           V ++G G  G LG  N   +++PKVV
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%)

Query: 30  VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRP 86
           +LRFL++      R   Q   G  HS+A+TS G +YS+GSN  GQLG  + ++      P
Sbjct: 132 ILRFLVS------RTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAP 185

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
             + ++ GI +   A G   + LIS +  V+ +GK++ G+   G+   +    P  ++S+
Sbjct: 186 LRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL--GLNDEQNRAYPSQLKSM 243

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
           + + V     G+ ++  L+ EG V+T   GN  +LGH    N++ P  ++  L    + Q
Sbjct: 244 RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVI-ELMGSTITQ 302

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           +A G  + LAL   PSG  VYS G G  G+LG  +   +  P+++
Sbjct: 303 VACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 3/148 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  ++    V+ +G N+ GQLG    +    P  ++S++ + +     G   ++ +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
           ++ G V+  G  ++G+  +GV   +++  P++V  L    + Q A GN  T A++   GR
Sbjct: 262 TNEGGVFTCGAGNYGQLGHGVSNNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGR 319

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           VY+F  G   +LG     +   P  ++G
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVVIG 347



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
           MA+Y  G    G+LG G   +E+   L  Q +     PV  +A G  H   +  +G+V  
Sbjct: 1   MALYCWGDASHGQLGLGGIENEQ-ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            G   +  LGH  E     P  +  L     I +A G   +  ++E G + S+G  +   
Sbjct: 60  CGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           +GH+   D        +  P+++  L  V+  VVQI+  N+     H+ ALT  G+LY++
Sbjct: 118 VGHSTDNDV-------IELPKILRFL--VSRTVVQIACGNN-----HSLALTSCGELYSW 163

Query: 403 GAGDKGQLGIELVNNQTERGNPERV 427
           G+   GQLG++   +      P R+
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRL 188


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 175/362 (48%), Gaps = 34/362 (9%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           +T+   +Y +G+ S GQLG G  E+E    P  +       I Q A G   T+ ++ +G+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VYA G +   +  + +   +    P L+  L +  VVQ A G+  +  LS  G+V   SW
Sbjct: 61  VYACGSNDHSQLGHDLPTKR----PLLIPELLDYVVVQIACGSRHSMALSEWGQV--LSW 114

Query: 176 GND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
           G++   +LG  T+ + V+   ++  L +  VVQIA G  + LAL    S   +YS G  +
Sbjct: 115 GDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNI 171

Query: 234 GGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC-- 290
            G+LG  +  +  H  + +    LL +    +A G  H+ ++ +   V  +GWGR  C  
Sbjct: 172 YGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV--FGWGRNNCGQ 229

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG  +E   S P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH     
Sbjct: 230 LGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH----- 284

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQ 409
           G G   AN + P++V  L  +   + Q++  N      HT AL  S G++Y FG G  GQ
Sbjct: 285 GFG---ANEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYGFGLGSSGQ 334

Query: 410 LG 411
           LG
Sbjct: 335 LG 336



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 17/304 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +TS G VY+ GSN   QLGH    +  RP  I  L    ++Q A G+  
Sbjct: 44  QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTK--RPLLIPELLDYVVVQIACGSRH 101

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +S+ GQV ++G +  G+         +V  P++V  L +  VVQ A GN  +  L+ 
Sbjct: 102 SMALSEWGQVLSWGDNDCGQLGQATD-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDV--EPHPL-LGTLENIPVVQIAAGYCYLLALACQP 221
            G +Y  SWG++   +LG +T P +V     P+ L TL  IPV  IA G  +   ++   
Sbjct: 161 CGELY--SWGSNIYGQLGVNT-PKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS--- 214

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              AV+  G    G+LG    T   +P  ++  + L ++   VA G   +  +  +G V 
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGVF 272

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
           T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G VY FG G S
Sbjct: 273 TCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332

Query: 341 ASLG 344
             LG
Sbjct: 333 GQLG 336



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 13/264 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V S+G N  GQLG  T ++  + P+ +R L    ++Q A G  
Sbjct: 94  QIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNN 153

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTA 162
            ++ ++  G++Y++G + +G+   GV   K VT    P  + +L  I V   A G   + 
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSF 211

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S+   V+ +   N  +LG + E +   P  L  TL  + V  +A G  + + L  +  
Sbjct: 212 IISKSSAVFGWGRNNCGQLGLNDETSRSYPTQL-KTLRTLGVRFVACGDEFSVFLTNEG- 269

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G  G+LGHG   +E  PR++   +L+      VA G  H  A+V   GRV 
Sbjct: 270 --GVFTCGAGAYGQLGHGFGANEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
            +G G  G LG  + +  ++P+VV
Sbjct: 326 GFGLGSSGQLGTRSTKSLTLPQVV 349



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 16/164 (9%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           VA G  H   +   GRV   G   +  LGH  +     P ++  L D   + +A G   +
Sbjct: 45  VACGHRHTLFLTSSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHS 102

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +SE G V S+G  +   LG       Q      V  P++V  L  V++ VVQI+  N+
Sbjct: 103 MALSEWGQVLSWGDNDCGQLG-------QATDQDIVQLPKIVRQL--VSKTVVQIACGNN 153

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                H+ ALT  G+LY++G+   GQLG+      T    P R+
Sbjct: 154 -----HSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRL 192



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS  ++    V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 202 AIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEF 261

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML--PRMVMELMGSTITQVACGNRHTLALVP 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GRVY F  G+  +LG  +  +   P  ++G
Sbjct: 320 SRGRVYGFGLGSSGQLGTRSTKSLTLPQVVIG 351


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 151/309 (48%), Gaps = 28/309 (9%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P P+ +L G++I+QAA G    
Sbjct: 47  VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHC 106

Query: 108 MLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 161
           + + D G  YA+G + +G    E E    GT+ +    P        + V Q A G   +
Sbjct: 107 LAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHS 166

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 217
            VL++EG V+T+        G    P D++    P  + G LE + V+ + A       L
Sbjct: 167 VVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRVIAVGA----FHNL 213

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A    G+ +++ G    G+LG G      HP  +E    L+L  V +AAG WH+  +   
Sbjct: 214 ALTEDGI-LWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSL--VDIAAGGWHSTALTIQ 270

Query: 278 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G V  WG G +G LG G+++    VP  V+ L     + V+ G   +  ++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYG 330

Query: 337 CGESASLGH 345
            G+   LG+
Sbjct: 331 RGDHGRLGY 339



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 174/374 (46%), Gaps = 34/374 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V ++GS   GQLG G  EE+     + +L    +    AG+  ++ I + G+++ +G + 
Sbjct: 10  VLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQ 69

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK  +SP  V +L  + +VQAAIG +    +   G  Y  +WG +   G 
Sbjct: 70  RGTLGHPPK-TKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAY--AWGGN-EYGQ 125

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E  + +         +IP  Q  A    +  +A   +   V +       + GH    
Sbjct: 126 CGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLT-------QEGHVWTW 178

Query: 244 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            +  P     ++    ++  L+ V V+A GA+H   + +DG +  WG   YG LG G+ +
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQ 238

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             S P  V+ L+D+  + +A G + +  ++  G+VY++G GE   LG        G+  +
Sbjct: 239 PRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGF-------GDDKS 291

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
           + + P  V  L    E +VQ+S   +     H+ ALT  G+++++G GD G+LG      
Sbjct: 292 SRMVPLKVELL--AGEDIVQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---GR 341

Query: 418 QTERGNPERVDIDL 431
           +   G P  VDIDL
Sbjct: 342 KLTTGQPMGVDIDL 355



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 105/252 (41%), Gaps = 45/252 (17%)

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           +A  P   AV + G G  G+LG G   ++     +E      +  VV  AG+ ++  + +
Sbjct: 1   MAAPPRATAVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVV--AGSRNSLAICE 58

Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DGR+ TWGW + G LGH  + + ES P  V AL  +K +  A G +    V ++G  Y++
Sbjct: 59  DGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAW 118

Query: 336 GCGESASLGHNAIADGQGNR--------------------------HANVLT-------- 361
           G  E    G        G R                          H+ VLT        
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTW 178

Query: 362 --PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVN 416
             P     +KQ++   RV  +     I   A H  ALTE G L+A+G  + GQLG     
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TG 235

Query: 417 NQTERGNPERVD 428
           +   R +P RV+
Sbjct: 236 DTQPRSHPIRVE 247


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
           G  HS AVT  G +Y++G    G LGHG     W P+ +  L +GI +   A G   T +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
           ++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  V+AA G + TA +     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 485

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                     G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   +AL
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 544

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  VY++G  + G+LG+ S  D K P  +E  +L       +A GA+H AV+   
Sbjct: 545 TT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 599

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             V TWG G  G LGHG+ +  + P +V++L D +   +A G   T  V
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 158/356 (44%), Gaps = 39/356 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+ +++G++S G   +GV     +  P+L+++
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDA 356

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L    +   A G F +  ++  G +YT+  G+   LGH  E +   P  +   LE I V 
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            IA G  +   +    S   +++ G G  G LGHG +     PR ++   L  L+ V  A
Sbjct: 417 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 471

Query: 266 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            G WH A V +             G++ TWG G  G LGHGN+E + VP  V AL +   
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 531

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             VA G   T  ++  G VY+ G      L         GN HA+  TP  V       E
Sbjct: 532 CQVACGHSLTVALTTSGHVYTMGSPVYGQL---------GNSHADGKTPNRV-------E 575

Query: 374 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             +  S    I   A H   LT   ++Y +G G  G+LG   V+   +R +P  V+
Sbjct: 576 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD---DRNSPTLVE 628



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 29/363 (7%)

Query: 21  QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 78
           ++ G S+ + +  LL  A E+    +      G  H++ VT +G  +S+G  S G+LGHG
Sbjct: 284 RRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 343

Query: 79  TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
                 +P+ I +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V 
Sbjct: 344 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 402

Query: 139 SPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
            P+ V   L+ I V   A G + TAV++  G+++TF  G    LGH  + +   P   + 
Sbjct: 403 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VD 460

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 248
           +L+ +  V+ A G  +  A+     G           +++ G G  G+LGHG+    K P
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEP 516

Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           +L+       ++P        H+  V     G V T G   YG LG+ + + ++  +V  
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 576

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
            L+      +A G Y   V++   +VY++G G +  LGH  + D          +P LV 
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVE 628

Query: 367 SLK 369
           SLK
Sbjct: 629 SLK 631



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 31/258 (12%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG  +  + PR + SL+G+R ++AA G  
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G    G   +G +  KLV  P  V +L      Q
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 533

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTE---PNDVEPHPLLGTLENIPVVQIAA 209
            A G+  T  L+  G VYT       +LG+ H +   PN VE     G L    V +IA 
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVE-----GKLHKSFVEEIAC 588

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----V 264
           G  ++  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       
Sbjct: 589 GAYHVAVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 645

Query: 265 AAGAWHAAVVGQDGRVCT 282
           AA   H    G D  +C+
Sbjct: 646 AAVCIHRWASGMDQSMCS 663



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PK++ ALN      VA G++ +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 403

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 404 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 175/362 (48%), Gaps = 32/362 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           ++ +GS   G+LG G  E+E  + PR +   +   I Q A G   T+ ++  GQVY+ G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           +  G+        +L    QL+  +  +   +AA G+  T V++  G++  FSWG++   
Sbjct: 61  NDHGQLGQEKGRKRL----QLISGIDPLAFRKAACGSSHTLVVNEWGQL--FSWGSNVEG 114

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LG       +    ++ TL    +VQIA G  + +AL    +   +Y+ G    G+LG 
Sbjct: 115 QLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT---NNGELYAWGSNSDGQLGL 171

Query: 240 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           GS T  E  P+L+     + +    VA G +H  V+ + G V  WG   +G LG  + + 
Sbjct: 172 GSDTKMELKPKLVHSLAAVPI--AFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQN 229

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            +VP  ++ L + +  + A G+  +  ++ DG V++ G G    LGH       GN+ + 
Sbjct: 230 RNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGH-------GNKTSE 282

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNN 417
           +L  Q+   ++ +   V QIS         HT AL  S G++YA+G G  GQLG  +  N
Sbjct: 283 ILPRQI---MELMGSTVTQISCGRR-----HTLALVPSRGRVYAWGLGGAGQLGNRIAQN 334

Query: 418 QT 419
            T
Sbjct: 335 ST 336



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 160/324 (49%), Gaps = 19/324 (5%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  ++IAVT +G VYS G+N  GQLG     +  R + I  +  +   +AA G
Sbjct: 35  EIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRK--RLQLISGIDPLAFRKAACG 92

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           +  T+++++ GQ++++G +   E + G+ + +  +  P++V++L    +VQ A G   + 
Sbjct: 93  SSHTLVVNEWGQLFSWGSNV--EGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSI 150

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            L+  G +Y +   +D +LG  ++        L+ +L  +P+  +A G  + + ++   S
Sbjct: 151 ALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVIS--KS 208

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           G AV++ G    G+LG     +   P  +    L N +    A G   +  +  DG V T
Sbjct: 209 G-AVFAWGRNTFGQLGLSDIQNRNVPCQLR--TLRNSRVCYAACGEEFSVFLTMDGGVFT 265

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESA 341
            G G YG LGHGN+  E +P+ +  L       ++ G  +T  +V   G VY++G G + 
Sbjct: 266 CGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAG 325

Query: 342 SLGHNAIADGQGNRHANVLTPQLV 365
            LG N IA        N  TPQ+V
Sbjct: 326 QLG-NRIAQ-------NSTTPQVV 341



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 3/145 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+I ++  G V+++G N+ GQLG    +    P  +R+L+  R+  AA G   ++ ++  
Sbjct: 201 HTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMD 260

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G + ++++  P+ +  L    V Q + G   T A++   GRVY 
Sbjct: 261 GGVFTCGAGMYGQLGHGNKTSEIL--PRQIMELMGSTVTQISCGRRHTLALVPSRGRVYA 318

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
           +  G   +LG+    N   P  + G
Sbjct: 319 WGLGGAGQLGNRIAQNSTTPQVVFG 343


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 28/311 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
           S  +AG  +S+A+   G ++++G N  G LGH   T+ E  P  + +L G++I+QAA G 
Sbjct: 44  SAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGG 103

Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 158
              + + D G+ YA+G + +G    E E    GT+ +    P        + V Q A G 
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGG 163

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
             + VL++EG V+T+        G    P D++    P  + G LE + +  IA G  + 
Sbjct: 164 THSVVLTQEGHVWTW--------GQPWPPGDIKNISTPVRVQG-LEQVSM--IAVGAFHN 212

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LAL+       +++ G    G+LG G       P  +E   L NL  V +AAG WH+A +
Sbjct: 213 LALSVD---RILWAWGNNEYGQLGIGDTQPRSQPIRVE--GLSNLSLVDIAAGGWHSAAL 267

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
            ++G V  WG G +G LG G+++    VP  VQ L     + V+ G   + V++ DG ++
Sbjct: 268 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIF 327

Query: 334 SFGCGESASLG 344
           S+G G+   LG
Sbjct: 328 SYGRGDHGRLG 338



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 42/378 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V ++GS   GQLG G  +E+ R R I +L    +    AG+  ++ I D G ++ +G + 
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQ 69

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK  +SP  V++L  + +VQAAIG +    +  +GR Y  +WG +     
Sbjct: 70  RGTLGHPPE-TKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAY--AWGGNEYGQC 126

Query: 184 HTEPNDVE----------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
             EP   E          P P    L+ + V Q+AAG  + + L  +     V++     
Sbjct: 127 GEEPERKEDGTRALRRDIPIPQRCALK-LKVRQVAAGGTHSVVLTQEGH---VWT----W 178

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           G     G   +   P  ++  + +++    +A GA+H   +  D  +  WG   YG LG 
Sbjct: 179 GQPWPPGDIKNISTPVRVQGLEQVSM----IAVGAFHNLALSVDRILWAWGNNEYGQLGI 234

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+ +  S P  V+ L+++  + +A G + +  ++++G+VY++G GE   LG        G
Sbjct: 235 GDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGF-------G 287

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
           +  ++ + P  V  L    E +VQ+S   +     H+  LT  G+++++G GD G+LG  
Sbjct: 288 DDKSSHMVPLQVQLL--AGEDIVQVSCGGT-----HSVVLTSDGRIFSYGRGDHGRLGD- 339

Query: 414 LVNNQTERGNPERVDIDL 431
               +   G+P  V I+L
Sbjct: 340 --GRKVTTGHPMEVPINL 355



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 31/272 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--------PRPIRSLQGIRII 98
           QA  G  H +AV  KG  Y++G N  GQ G     +E          P P R    +++ 
Sbjct: 98  QAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR 157

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q AAG   +++++  G V+ +G+       +     K +++P  V+ L+ + ++  A+G 
Sbjct: 158 QVAAGGTHSVVLTQEGHVWTWGQ------PWPPGDIKNISTPVRVQGLEQVSMI--AVGA 209

Query: 159 FFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           F    LS + R+  ++WGN+   +LG   T+P   +P  + G L N+ +V IAAG  +  
Sbjct: 210 FHNLALSVD-RIL-WAWGNNEYGQLGIGDTQPRS-QPIRVEG-LSNLSLVDIAAGGWHSA 265

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV-VAAGAWHAAV 273
           AL  +     VY+ G G  G+LG G   D+K   ++  Q QLL  + +V V+ G  H+ V
Sbjct: 266 ALTKEGE---VYAWGRGEHGRLGFG---DDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVV 319

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
           +  DGR+ ++G G +G LG G +     P  V
Sbjct: 320 LTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEV 351


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 181/365 (49%), Gaps = 43/365 (11%)

Query: 44  ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +N  AIA  G H++A+   G V+S+G+N+ GQLG+GT +  + P  ++ L    +++A  
Sbjct: 393 DNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLVEA-- 450

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G+  ++ +   G V+ +G   F E+ +  + TK + SP  ++  K   + + A G  +  
Sbjct: 451 GSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 221
           VL ++G ++    GND      T+ + V     L  L+NI  V+ IAAGY + LA+    
Sbjct: 508 VLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG 564

Query: 222 SGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQDG 278
           +   V+S G   L  K        EK+    E+  ++  L  VV VAAG +H+  + +DG
Sbjct: 565 T---VWSWGDTNLDNK--------EKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG 613

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            V +WG+  YG LG+G  E   VP  V+ LN+V AI  A GDY +  + +DG V+ +G  
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGSN 671

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               LG   I             P  V  L    + VV I+  ++     H+ AL + G 
Sbjct: 672 IRGQLGRRNIEFST--------VPLKVEKL----DNVVAIAAGDT-----HSVALKKDGT 714

Query: 399 LYAFG 403
           ++ +G
Sbjct: 715 VWVWG 719



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 191/414 (46%), Gaps = 53/414 (12%)

Query: 29  LVLRFL---LAGEACCRRENSQAI-----------AGPGHSIAVTSKGVVYSFGSNSSGQ 74
           L+  FL   L+      +ENS+ +           AG  H++A+   G V+++G N  GQ
Sbjct: 14  LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQ 73

Query: 75  LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 134
           LG+GT ++   P  ++ L+   ++  +AG   ++ +   G V+ +G  ++G+ +  V   
Sbjct: 74  LGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVY-- 129

Query: 135 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
           +  T+P  V+ LKNI  + A  G  F+  +  +G V+ +   N   LG  +      P  
Sbjct: 130 RDFTTPVKVKELKNIVAIAA--GWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVK 187

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           + G  +   VV ++AG  + LAL    +   V+S G    G+LG+  R  E +   +   
Sbjct: 188 VKGLKD---VVAVSAGLYHSLALKRDGT---VWSWGYNEDGELGN--RPTEDYTVSVP-V 238

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
           ++  L  V+ ++AG +H+  + +DG V  WG G      +G  +   +P  ++ LN V A
Sbjct: 239 RVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGI--IEKNGKIDNSYIPVRIRWLNKVVA 296

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           I  A G   +  + +DG V+ +G      LG N         H+    P  V  LK    
Sbjct: 297 I--AAGYRHSIALKDDGTVWVWGHNSYGVLGSNV------GEHS--FLPVQVKGLKN--- 343

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            VV ++         H+ ALT++G ++A+G    GQLG E  NN      P +V
Sbjct: 344 -VVAVAAG-----RLHSVALTKNGTIWAWGNNAFGQLGRE--NNSFSLNLPYKV 389



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 142/300 (47%), Gaps = 25/300 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S+AV S G V+++G N+ G+LG G+ +    P  ++ L+   ++  +AG   ++ 
Sbjct: 149 AGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLK--DVVAVSAGLYHSLA 206

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+++G +  GE          V+ P  V+ L ++  + A  G F +  L+++G 
Sbjct: 207 LKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISA--GGFHSIALNKDGA 264

Query: 170 VYTFSWGNDARLGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           V+   WG     G   E N   D    P+     N  VV IAAGY + +AL    +   V
Sbjct: 265 VWI--WG-----GGIIEKNGKIDNSYIPVRIRWLN-KVVAIAAGYRHSIALKDDGT---V 313

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G LG  S   E H  L  Q + L    V VAAG  H+  + ++G +  WG  
Sbjct: 314 WVWGHNSYGVLG--SNVGE-HSFLPVQVKGLK-NVVAVAAGRLHSVALTKNGTIWAWGNN 369

Query: 287 RYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            +G LG  N     ++P  V+ L++V AI  A G   T  +  DG V+S+G      LG+
Sbjct: 370 AFGQLGRENNSFSLNLPYKVKWLDNVVAI--AAGGSHTLAIKRDGTVWSWGANNKGQLGN 427



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 21/293 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+S+G N  G+LG+  TE+     P+R      +I  +AG   ++ 
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIA 258

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G V+ +G     E    +  + +   P  +  L    VV  A G   +  L  +G 
Sbjct: 259 LNKDGAVWIWGGGII-EKNGKIDNSYI---PVRIRWLNK--VVAIAAGYRHSIALKDDGT 312

Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+   WG+++   LG +   +   P  + G L+N  VV +AAG  + +AL    +   ++
Sbjct: 313 VWV--WGHNSYGVLGSNVGEHSFLPVQVKG-LKN--VVAVAAGRLHSVALTKNGT---IW 364

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG     +     L  + + L+   V +AAG  H   + +DG V +WG   
Sbjct: 365 AWGNNAFGQLGR--ENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANN 421

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            G LG+G  +   +P  V+ LN  KA+ V  G   +  V +DG V+ +G  ES
Sbjct: 422 KGQLGNGTYKSSYIPTCVKGLN--KAVLVEAGSQHSLAVDKDGTVWVWGFIES 472


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + +   A G     L++  G+V+ +G++S G   +GV   K V  P+LVE+
Sbjct: 269 PRPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGV--GKNVVQPRLVEA 326

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L +  V   A G F +  ++  G +YT+  G  N   LGH ++ +   P  + G LE + 
Sbjct: 327 LTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL- 385

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             QIA   C     A   S   +++ G G  G LGHG R +  +PR +E   LL L+ + 
Sbjct: 386 --QIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIA 441

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E    P  V AL D  
Sbjct: 442 VACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSN 501

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  +++ G V++ G      LG N  +DG+         P L      V 
Sbjct: 502 FHKIACGHSLTAGLTKSGRVFTMGSTVYGQLG-NPQSDGK--------VPCL------VG 546

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +++ + S+        H   LT   ++Y +G G  G+LG
Sbjct: 547 DKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLG 585



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 24/284 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AVT  G +Y++G  ++++G LGHG+    W P+ I   L+G++I   A G   T
Sbjct: 338 GEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHT 397

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            L++  GQ++ FG  +FG   +G +    V+ P+ VESL  +  +  A G + TA +   
Sbjct: 398 ALVTSTGQLFTFGDGTFGVLGHGDRQN--VSYPREVESLLGLRTIAVACGVWHTAAVVEV 455

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+     
Sbjct: 456 IATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVAALIDSNFHKIACGHSLTAG 514

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAVVG 275
           L    SG  V+++G  + G+LG+  ++D K P L+ ++    +++ +  A GA+H AV+ 
Sbjct: 515 LT--KSGR-VFTMGSTVYGQLGN-PQSDGKVPCLVGDKIARESIEEI--ACGAYHVAVLT 568

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
               V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 569 SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 38/335 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G V+++G  S G LGHG  +   +PR + +L    +   A G   +  ++ A
Sbjct: 289 HASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMA 348

Query: 114 GQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           G++Y +G    G    G+ G          K +  P  +E L+  FV   A G + TA++
Sbjct: 349 GELYTWGD---GTHNAGLLGHGSDVSHWIPKRIAGP--LEGLQIAFV---ACGPWHTALV 400

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL------- 217
           +  G+++TF  G    LGH    N   P   + +L  +  + +A G  +  A+       
Sbjct: 401 TSTGQLFTFGDGTFGVLGHGDRQNVSYPRE-VESLLGLRTIAVACGVWHTAAVVEVIATH 459

Query: 218 -ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            +   S   +++ G G   +LGHG +     P  +      N     +A G    A + +
Sbjct: 460 SSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHK--IACGHSLTAGLTK 517

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSF 335
            GRV T G   YG LG+   + + VP +V      ++I  +A G Y   V++   +VY++
Sbjct: 518 SGRVFTMGSTVYGQLGNPQSDGK-VPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTW 576

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           G G +  LGH  I D +        TP LV +LK 
Sbjct: 577 GKGANGRLGHGDIEDRK--------TPALVEALKD 603



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 19/235 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL G+R I  A G   T  +
Sbjct: 393 GPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           +G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARL--KPTCVAALIDSNFHKIACGHS 510

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            TA L++ GRV+T       +LG+      V P  +   +    + +IA G  ++  L  
Sbjct: 511 LTAGLTKSGRVFTMGSTVYGQLGNPQSDGKV-PCLVGDKIARESIEEIACGAYHVAVLT- 568

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P L+E  +  +++   +A G+ ++A +
Sbjct: 569 --SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK--YIACGSNYSAAI 619



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 14/170 (8%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           R D   PR +E   +L++  +  A G  HA++V + G V TWG    GCLGHG  +    
Sbjct: 263 RADVLLPRPLESSVVLDVHHI--ACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQ 320

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P++V+AL       VA G++ +  V+  G++Y++G G      HNA   G G+  ++ + 
Sbjct: 321 PRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGT-----HNAGLLGHGSDVSHWIP 375

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++   L+      +QI+      W  HT  +T +G+L+ FG G  G LG
Sbjct: 376 KRIAGPLEG-----LQIAFVACGPW--HTALVTSTGQLFTFGDGTFGVLG 418



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 37/76 (48%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           L G+   R    +   G  H   +TSK  VY++G  ++G+LGHG  E+   P  + +L+ 
Sbjct: 544 LVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKD 603

Query: 95  IRIIQAAAGAGRTMLI 110
             +   A G+  +  I
Sbjct: 604 RHVKYIACGSNYSAAI 619


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 31/380 (8%)

Query: 36   AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
            AG       + +A A P   +  T    V  +G N   QLG     +   P   +++  +
Sbjct: 2619 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 2674

Query: 96   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            R I  A G+    ++S  G+VYA G+ + G    GV  T  V  P  +  L    V + A
Sbjct: 2675 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVA 2732

Query: 156  I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            +  G      L+ +G+V+++  G D +LGH       +P  L+  L    +  +A G  +
Sbjct: 2733 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 2791

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
              A++ Q     +Y+ G G  G+LGHG  T +  P+L+    L   + V VA G+  A  
Sbjct: 2792 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 2846

Query: 274  VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
            +   +DG V +WG G +G LG G  E    P  ++ L+ +  + +  G   +  ++  G+
Sbjct: 2847 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 2906

Query: 332  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
            V+++G G+   LGH       G++H  V  PQ +  L+    RV+ +++        H  
Sbjct: 2907 VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 2951

Query: 392  ALTESGKLYAFGAGDKGQLG 411
            A+T++G++YA+G  D GQ G
Sbjct: 2952 AVTDAGQVYAWGDNDHGQQG 2971



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
            IAG   S+ + S+ G VY+ G  ++G+LG G T     P   P+     ++ +   +G  
Sbjct: 2679 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 2738

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   A G+  +A +S
Sbjct: 2739 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 2796

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G      LA    G A
Sbjct: 2797 SQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDAQTLALTEDG-A 2854

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            V+S G G  GKLG G       P  IE+   + +  V +  GA  +  + + G V TWG 
Sbjct: 2855 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 2912

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY++G  +      
Sbjct: 2913 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 2969

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
                 G GN   N   P LV  L  V    V    ++SI W
Sbjct: 2970 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 3005



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 37/339 (10%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 153
            +I Q A    + +++S  G++Y + + +  EAE           P  +E +  ++F+  
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 273

Query: 154 A--AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           A    G  F A+ S     Y++  G D RLGH        P  +   LE   V  +  G 
Sbjct: 274 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 331

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            Y  A+ C   G  + + G G   +LGHG+  D   P L+       +  V + +G  H+
Sbjct: 332 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 388

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +  +G V  WG G YG LG+GN      P +V++L  V+   V  G   +  +S +G 
Sbjct: 389 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 446

Query: 332 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           +Y++  G++  LGH  +    QG        P+LV+SL+  ++R+V ++++      AH 
Sbjct: 447 LYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 492

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            AL+ SG+++ +G  D  Q+    V+++     P  V +
Sbjct: 493 LALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSL 531



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHG  +   +P+PI  L+G R+I  A GA  
Sbjct: 2890 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 2949

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 2950 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 2999



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 16/169 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+A+TS+G+V+++G    G+LG+G      +P  + SL   R+ +  AG+  ++ 
Sbjct: 383 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 440

Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +S  GQ+Y +GK +  G    E  VQG  +   P+LV SL++  +V  A+       LS 
Sbjct: 441 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 497

Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
            G V  F WG ND++      P  V   PLL T  L ++P    +   C
Sbjct: 498 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 541



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+T  G + ++G  +  +LGHG +++   P  + +L    ++  A G+G   ++
Sbjct: 330 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 389

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G V+A+G   +G+   G     L   P LVESL  +  V A  G+ F+  LS EG
Sbjct: 390 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 445

Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
           ++YT  WG    LGH      V+    P  L+ +L++  +V +A    + LAL+
Sbjct: 446 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 496



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 14/237 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+ S    YS+G+    +LGHG T     P  I +L+   +     G   +  I+  
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 340

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G +  +G+ ++    +G    +  + P LV +L +  VV  A+  G+  +  L+ EG V+
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 398

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+      ++P      +E++P VQ + AG  + +AL+ +   +  +   
Sbjct: 399 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSVALSSE-GQLYTWGKA 453

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             LG +L   S      PRL+   Q   +  V VA    H   +   G V  +GWGR
Sbjct: 454 TCLGHQLVERSVQGCSVPRLVSSLQHKRI--VDVAVSVAHCLALSSSGEV--FGWGR 506



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 280  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 2702

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 2703 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 2749

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +++G G+ G+LG     N+T    P  V+
Sbjct: 2750 FSWGEGEDGKLG---HGNRTTLDKPRLVE 2775



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 102
           +  AG   S+A++S+G +Y++G  +   LGH   E   +    PR + SLQ  RI+  A 
Sbjct: 430 RVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 487

Query: 103 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 143
                + +S +G+V+ +G+ DS       V    L+ +P LV
Sbjct: 488 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 529


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
           G  HS AVT  G +Y++G    G LGHG     W P+ +  L +GI +   A G   T +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
           ++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  V+AA G + TA +     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 485

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                     G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   +AL
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 544

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  VY++G  + G+LG+ S  D K P  +E  +L       +A GA+H AV+   
Sbjct: 545 TT--SGH-VYTMGSPVYGQLGN-SHADGKLPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 599

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             V TWG G  G LGHG+ +  + P +V++L D +   +A G   T  V
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 157/356 (44%), Gaps = 39/356 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+ +++G++S G   +GV     +  P+L+++
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDA 356

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L    +   A G F +  ++  G +YT+  G+   LGH  E +   P  +   LE I V 
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            IA G  +   +    S   +++ G G  G LGHG +     PR ++   L  L+ V  A
Sbjct: 417 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 471

Query: 266 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            G WH A V +             G++ TWG G  G LGHGN+E + VP  V AL +   
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 531

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             VA G   T  ++  G VY+ G      LG         N HA+   P  V       E
Sbjct: 532 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NSHADGKLPNRV-------E 575

Query: 374 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             +  S    I   A H   LT   ++Y +G G  G+LG   V+   +R +P  V+
Sbjct: 576 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD---DRNSPTLVE 628



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 29/363 (7%)

Query: 21  QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 78
           ++ G S+ + +  LL  A E+    +      G  H++ VT +G  +S+G  S G+LGHG
Sbjct: 284 RRVGSSFDMKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 343

Query: 79  TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
                 +P+ I +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V 
Sbjct: 344 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 402

Query: 139 SPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
            P+ V   L+ I V   A G + TAV++  G+++TF  G    LGH  + +   P   + 
Sbjct: 403 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VD 460

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 248
           +L+ +  V+ A G  +  A+     G           +++ G G  G+LGHG+    K P
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEP 516

Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           +L+       ++P        H+  V     G V T G   YG LG+ + + +   +V  
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEG 576

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
            L+      +A G Y   V++   +VY++G G +  LGH  + D          +P LV 
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVE 628

Query: 367 SLK 369
           SLK
Sbjct: 629 SLK 631



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 31/258 (12%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG  +  + PR + SL+G+R ++AA G  
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G    G   +G +  KLV  P  V +L      Q
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 533

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTE---PNDVEPHPLLGTLENIPVVQIAA 209
            A G+  T  L+  G VYT       +LG+ H +   PN VE     G L    V +IA 
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVE-----GKLHKSFVEEIAC 588

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----V 264
           G  ++  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       
Sbjct: 589 GAYHVAVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 645

Query: 265 AAGAWHAAVVGQDGRVCT 282
           AA   H    G D  +C+
Sbjct: 646 AAVCIHRWASGMDQSMCS 663



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PK++ ALN      VA G++ +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 403

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 404 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 34/389 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           +Q   G  H++AVT +G V  +G N  GQ G   G +E++ +PR ++SL   ++ Q A G
Sbjct: 91  TQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACG 150

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTA 162
           +  +M ++  G+++A+G +SFG+   G  G  L    PQ + SL  + + + A G + + 
Sbjct: 151 SMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSF 210

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            LS  G V+ +   N  +LG  T  + V P P L  L+   V  IA G  Y   L    S
Sbjct: 211 ALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTP-LKNLKTKQVKYIACGQNYTAILTA--S 267

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVC 281
           G  ++  G G  G+LGHGS ++E +PR ++ F  L  +   VA G  H  V+ G+ GR  
Sbjct: 268 G-GLFLFGQGSEGQLGHGSHSNEVNPRSVQGF--LGSEITQVACGRQHTLVLEGRTGRFF 324

Query: 282 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           + G G  G LG  N+  +S    VP   +A +  +    + G+ +  ++   G +++ G 
Sbjct: 325 SLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEG--CSNGEESRSII---GSIFAGGD 379

Query: 338 GESASLGHNAIADGQGNRHANV--LTPQLVTS--LKQVNE-----------RVVQISLTN 382
                +      D   +    +  + P ++T   L++V+E           + ++++L++
Sbjct: 380 QSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSS 439

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               NA       SG L+ FG G +GQLG
Sbjct: 440 PACLNASFLVGAGSGGLFLFGQGSEGQLG 468



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 14/296 (4%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  +   G V   G+N  GQLG      E    P  + + + I Q + G   T+ ++D 
Sbjct: 49  HTCVLLRDGTVMMCGANDRGQLGQDRPGSELAHVP--ATETLVITQVSCGNDHTLAVTDR 106

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           GQV  +G++  G+       ++    P+ ++SL +  V Q A G+  +  L+R+GR+  F
Sbjct: 107 GQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRI--F 164

Query: 174 SWGNDA--RLGHHTEPNDV-EPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +WG+++  +LG       +   HP  L +L  +P+ ++A G  +  AL+   SG AV+  
Sbjct: 165 AWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSV--SG-AVFGW 221

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+  D   P  ++  +   ++   +A G  + A++   G +  +G G  G
Sbjct: 222 GKNNCGQLGLGTTEDRVSPTPLKNLKTKQVK--YIACGQNYTAILTASGGLFLFGQGSEG 279

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLG 344
            LGHG+   E  P+ VQ     +   VA G   T V+    G  +S G G    LG
Sbjct: 280 QLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLG 335



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 158/363 (43%), Gaps = 41/363 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           V+S+G    GQLG     ++      PR + +L G +I + + G   T ++   G V   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           G +  G+      G++L   P    + + + + Q + GN  T  ++  G+V    WG + 
Sbjct: 63  GANDRGQLGQDRPGSELAHVP----ATETLVITQVSCGNDHTLAVTDRGQV--LGWGRND 116

Query: 180 R--LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
           R   G  T  ++ +  P  L +L +  V Q+A G  + +AL        +++ G    G+
Sbjct: 117 RGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALT---RDGRIFAWGDNSFGQ 173

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           LG G+     +    +Q   L   P+  +A G WH+  +   G V  WG    G LG G 
Sbjct: 174 LGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGT 233

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            E    P  ++ L   +  ++A G   T +++  G ++ FG G    LGH +        
Sbjct: 234 TEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGS-------- 285

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNA----HTFALT-ESGKLYAFGAGDKGQL 410
           H+N           +VN R VQ  L + I   A    HT  L   +G+ ++ G G KGQL
Sbjct: 286 HSN-----------EVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQL 334

Query: 411 GIE 413
           G++
Sbjct: 335 GLD 337



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  ++  +T+ G ++ FG  S GQLGHG+   E  PR ++   G  I Q A G   T+++
Sbjct: 257 GQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316

Query: 111 S-DAGQVYAFGKDSFGEAEYGVQGTKLVTSP--------QLVESLKNIFVVQAAIGNFFT 161
               G+ ++ G+ S G+       +K   SP           E   N    ++ IG+ F 
Sbjct: 317 EGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFA 376

Query: 162 AVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTL-----ENIPVVQIAAGYCYL 214
                +      S GND    L        +EP  L   L     E+ P+++ +     L
Sbjct: 377 G---GDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTL 433

Query: 215 -LALACQPSGMAVYSVGCGLGG----------KLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
            +AL+      A + VG G GG          +LGHGS ++E +PR ++ F  L  +   
Sbjct: 434 EMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDF--LGNEITQ 491

Query: 264 VAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
           VA G  H  V+ G+ G   + G G  G LG  N   +S   +V
Sbjct: 492 VACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLV 534



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 25/210 (11%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           M+V+S GC   G+LG     D+      PR  E   L   Q   ++ G  H  V+ +DG 
Sbjct: 1   MSVFSWGCTQDGQLGISGLGDDVPSLSSPR--EVPALAGKQIREISCGLRHTCVLLRDGT 58

Query: 280 VCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           V   G    G LG      E   VP    A   +    V+ G+  T  V++ G V  +G 
Sbjct: 59  VMMCGANDRGQLGQDRPGSELAHVP----ATETLVITQVSCGNDHTLAVTDRGQVLGWGR 114

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
            +    G +   D +  R      P+ + SL     +V Q++  +      H+ ALT  G
Sbjct: 115 NDRGQCGLST-GDSEDKRK-----PRFLKSLSSC--QVAQVACGS-----MHSMALTRDG 161

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           +++A+G    GQLGI        R +P+++
Sbjct: 162 RIFAWGDNSFGQLGIGAPGRTLYRDHPQQL 191



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 11/98 (11%)

Query: 30  VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
            L   L+  AC    N+  + G G        G ++ FG  S GQLGHG+   E  PR +
Sbjct: 432 TLEMALSSPACL---NASFLVGAG-------SGGLFLFGQGSEGQLGHGSHSNEVNPRSV 481

Query: 90  RSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGE 126
           +   G  I Q A G   T+++    G  Y+ G+ S G+
Sbjct: 482 KDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQ 519


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 172/357 (48%), Gaps = 36/357 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G+ S GQLG G  EEE    P  I       + Q A G   T+ ++ +G+VYA G 
Sbjct: 3   LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGS 62

Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
           +     +Y   G +L T  P  +  L++  + Q A G+  +  LS  G+V  FSWG++  
Sbjct: 63  N-----DYSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQV--FSWGDNEC 115

Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH ++ + V+   ++  L +  VVQIA G  + LAL C      +YS G  L G+LG
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC---CGELYSWGSNLYGQLG 172

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 295
             S  D +      +   L   PV  +A G  H+ ++ +   V  +GWGR  C  LG  +
Sbjct: 173 VSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAV--FGWGRNNCGQLGLND 230

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
           E   + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH          
Sbjct: 231 ETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGF-------- 282

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
            +N + P++V  L  +   + Q++  N      HT AL  S G++Y FG G  GQLG
Sbjct: 283 SSNEMLPRMVMEL--MGSTISQVACGNR-----HTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 157/307 (51%), Gaps = 21/307 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP  I  LQ   I Q A G+ 
Sbjct: 39  NQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELQDYVITQIACGSR 96

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +S+ GQV+++G +  G+  +      +V  P++V +L +  VVQ A G+  +  L+
Sbjct: 97  HSMALSEWGQVFSWGDNECGQLGHA-SDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT 155

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPH--PL-LGTLENIPVVQIAAG--YCYLLALA 218
             G +Y  SWG++   +LG  + PND++    P+ L TL  IPV  IA G  + +L++  
Sbjct: 156 CCGELY--SWGSNLYGQLG-VSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLIS-- 210

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                 AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G
Sbjct: 211 ---KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTIEG 265

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
            V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G +Y FG 
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325

Query: 338 GESASLG 344
           G S  LG
Sbjct: 326 GSSGQLG 332



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 137/265 (51%), Gaps = 13/265 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A++  G V+S+G N  GQLGH + ++  + P+ +R+L    ++Q A G+
Sbjct: 89  TQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGS 148

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFT 161
             ++ ++  G++Y++G + +G+   GV     +    +P  + +L  I V   A G   +
Sbjct: 149 NHSLALTCCGELYSWGSNLYGQL--GVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHS 206

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            ++S+   V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  + 
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTIEG 265

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
               V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSRGRI 320

Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
             +G G  G LG  N +  ++P++V
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQLV 345



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           +A G  H   +   G+V   G   Y  LGH  E     P  +  L D     +A G   +
Sbjct: 41  IACGHRHTLFLTASGKVYACGSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHS 98

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +SE G V+S+G  E   LGH +  D        V  P++V +L  V++ VVQI+  ++
Sbjct: 99  MALSEWGQVFSWGDNECGQLGHASDQDI-------VKLPKIVRNL--VSKTVVQIACGSN 149

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                H+ ALT  G+LY++G+   GQLG+   N+  +   P R+
Sbjct: 150 -----HSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRL 188


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 39/371 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAG 105
           A+  P H      K  ++ +GS   G+LG G  E+E    PR +   +   I Q A G  
Sbjct: 17  AVEYPLHK-----KKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T++I+  G++Y+ G + +G+  +     +L    QL+  L      +AA G + T  ++
Sbjct: 72  YTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAACGAYHTLAIN 127

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPS 222
             G++  FSWG++   +LG +++ N +E  P ++ TL    VVQIA G  +  AL    +
Sbjct: 128 EWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMKHAFALT---N 181

Query: 223 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              +YS G    G+LG G+    E  P+ I  F  + +    +A G +H+  + + G V 
Sbjct: 182 NGELYSWGSNSEGQLGLGTDIKYEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAVF 239

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG   +G LG  + +  ++P  +Q L + K  + A G+  +  ++ DG V++ G G   
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 400
            LGH +        ++N + P+ V  L  +   V QIS         HT AL  S G++Y
Sbjct: 300 QLGHGS--------NSNEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSRGRVY 344

Query: 401 AFGAGDKGQLG 411
           A+G G  GQLG
Sbjct: 345 AWGLGGAGQLG 355



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 159/325 (48%), Gaps = 21/325 (6%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  +++ +T  G +YS G+N  GQLGH    +  R + I  L      +AA G
Sbjct: 62  EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKAACG 119

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 162
           A  T+ I++ GQ++++G ++  E + G+     + +SP++V++L    VVQ A G     
Sbjct: 120 AYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+  G +Y++   ++ +LG  T+   +++P   +     IP+  IA G  +  ++A   
Sbjct: 178 ALTNNGELYSWGSNSEGQLGLGTDIKYEIKPK-FISAFIGIPIAFIACGGYH--SIAISK 234

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           SG AV+  G    G+LG     D   P  ++  Q  N +    A G   +  +  DG V 
Sbjct: 235 SG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTVDGGVF 291

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
           T G G YG LGHG+   E +P+ V  L       ++ G  +T  +V   G VY++G G +
Sbjct: 292 TCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351

Query: 341 ASLGHNAIADGQGNRHANVLTPQLV 365
             LG+++          +V TPQ+V
Sbjct: 352 GQLGNHST--------RSVTTPQVV 368



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HSIA++  G V+ +G N+ GQLG   T++   P  +++LQ  +I  AA G   ++ ++  
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVD 287

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G    +++  P+ V  L    V Q + G   T A++   GRVY 
Sbjct: 288 GGVFTCGAGMYGQLGHGSNSNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 345

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
           +  G   +LG+H+  +   P  + G
Sbjct: 346 WGLGGAGQLGNHSTRSVTTPQVVHG 370



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           ++  G  + G+LG G   DE    PR ++  +   +Q +  A G  +  V+ Q G + + 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI--ACGENYTVVITQIGEIYSC 85

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LGH  E+     +++  L+       A G Y T  ++E G ++S+G      L
Sbjct: 86  GNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G N+       ++    +P++V +L      VVQI+         H FALT +G+LY++G
Sbjct: 144 GLNS-------KNFMESSPRMVKTLG--TSVVVQIACGMK-----HAFALTNNGELYSWG 189

Query: 404 AGDKGQLGI 412
           +  +GQLG+
Sbjct: 190 SNSEGQLGL 198



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           + QIA G  Y + +        +YS G    G+LGH      K  +LI        +   
Sbjct: 63  IQQIACGENYTVVIT---QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKA- 116

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYT 322
            A GA+H   + + G++ +WG    G LG  ++   ES P++V+ L     + +A G   
Sbjct: 117 -ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKH 175

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
            F ++ +G++YS+G      LG        G      + P+ +++        + I +  
Sbjct: 176 AFALTNNGELYSWGSNSEGQLG-------LGTDIKYEIKPKFISAF-------IGIPIAF 221

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+ A+++SG ++ +G    GQLG+   N+  +R  P
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGL---NDTQDRNLP 260



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 24/155 (15%)

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVA 317
           +PV+      H     +   +  WG   +G LG G  E E++  P+ +      +   +A
Sbjct: 13  EPVIAVEYPLH-----KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIA 67

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G+  T V+++ G++YS G  +   LGH      +G +       QL+  L         
Sbjct: 68  CGENYTVVITQIGEIYSCGNNDYGQLGHE-----KGRKRL-----QLIPGLDA------- 110

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                +     HT A+ E G+L+++G+  +GQLG+
Sbjct: 111 FVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGL 145


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 172/368 (46%), Gaps = 47/368 (12%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + S   + ++GS   GQLG GT EE+     + +L+   +    +G+  ++ I D G ++
Sbjct: 1   MVSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMF 60

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +  G   +  + TK    P  V++L N+ + QAAIG +    +  +GR Y  +WG 
Sbjct: 61  TWGWNQRGTLGHPPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--AWGG 117

Query: 178 DARLGHHTEP-NDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +       EP  D    P+   +         + V Q+AAG  + + L            
Sbjct: 118 NEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT----------- 166

Query: 230 GCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTW 283
                 + GH     +  P     ++    ++  L+ V ++A GA+H   + +DGR+  W
Sbjct: 167 ------REGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAW 220

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LG G+ +  S P  V  L+D+  + +A G + +  +++ G+VY +G GE   L
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRL 280

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G         N  ++ + PQ V  L +  E ++Q+S   +     H+ ALT  G++++FG
Sbjct: 281 GFGD------NDKSSKMVPQKVNLLAE--EDIIQVSCGGT-----HSVALTRDGRIFSFG 327

Query: 404 AGDKGQLG 411
            GD G+LG
Sbjct: 328 RGDHGRLG 335



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 149/311 (47%), Gaps = 32/311 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           ++G  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  ++I QAA G    
Sbjct: 44  VSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + + D G+ YA+G + +G+        E G    + +  P+       + V Q A G   
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
           + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A       
Sbjct: 162 SVVLTREGHVWTW--------GQPWPPGDIKQIFVPVRVQG-LENVSIIAVGA----FHN 208

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA +  G  + + G    G+LG G      HP  +     L L  V +AAG WH+  +  
Sbjct: 209 LALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTL--VDIAAGGWHSTALTD 265

Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            G V  WG G +G LG G+ +  S  VP+ V  L +   I V+ G   +  ++ DG ++S
Sbjct: 266 KGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFS 325

Query: 335 FGCGESASLGH 345
           FG G+   LG+
Sbjct: 326 FGRGDHGRLGY 336



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 25/267 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPR------PIRSLQGIRII 98
           +QA  G  H +AV  +G  Y++G N  GQ G    ++E  RP       P R    + + 
Sbjct: 94  TQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR 153

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q AAG   +++++  G V+ +G+       +     K +  P  V+ L+N+ ++  A+G 
Sbjct: 154 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQIFVPVRVQGLENVSII--AVGA 205

Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           F    L  +GR+   +WGN+   +LG         P P+ G L+++ +V IAAG  +  A
Sbjct: 206 FHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTSHPVPVHG-LDDLTLVDIAAGGWHSTA 262

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L  +     VY  G G  G+LG G   D+    + ++  LL  + ++ V+ G  H+  + 
Sbjct: 263 LTDKGE---VYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP 302
           +DGR+ ++G G +G LG+G +     P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN   IA G  H++A+   G + ++G+N  GQLG G T+    P P+  L  + ++  AA
Sbjct: 196 ENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAA 255

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  ++D G+VY +G+   G   +G         PQ V  L    ++Q + G   + 
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315

Query: 163 VLSREGRVYTFSWGNDARLGH 183
            L+R+GR+++F  G+  RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 16/150 (10%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           +  WG G  G LG G  E +    VV+AL       V +G   +  + +DG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             +LGH         +  N+  P  V +L  V        +T +     H  A+ + G+ 
Sbjct: 67  RGTLGHPP-----ETKTENI--PSRVKALANVK-------ITQAAIGGWHCLAVDDQGRA 112

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           YA+G  + GQ G E + +  E G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W PR I   L+G++I   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G  + G+LG  +   +  P L+E  ++ +   + +A G++H AV+  
Sbjct: 314 LT---TSGKVWTMGNSVYGQLG--NLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    +   A G F T  ++  G +YT+  G  N   LGH T+     P  + G LE + 
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             QIA   C     A   S   +++ G G  G LGHG       PR +E   L  L+ + 
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240

Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A     +V Q       G++ TWG G    LGHG++E    P  V +L D  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   T  ++  G V++ G      LG N  +DG+         P LV   K  +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIAS 349

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V+QI+       + H   LT   +++ +G G  G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 174/381 (45%), Gaps = 45/381 (11%)

Query: 64  VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           V  FG++ +  +G+ G+  +   P+P+ S   + +   A G     L+S  G+V+ +G+ 
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEA 299

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----ND 178
           S G   +G+   K VT PQL+ESL    +   A G F T  ++  G +YT  WG    N 
Sbjct: 300 SGGRLGHGM--GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYT--WGDGTHNA 355

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
             LGH T+ +   P  + G LE +   QIA+  C     A   S   +++ G G  G LG
Sbjct: 356 GLLGHGTDVSHWIPKRISGPLEGL---QIASVSCGPWHTALITSTGQLFTFGDGTFGVLG 412

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGR 287
           HG +    +PR +E   L  L+ + VA G WHAA + +            G++ TWG G 
Sbjct: 413 HGDKETVFYPREVES--LSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGD 470

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
              LGHG++E    P  V AL D     VA G   T  ++  G VY+ G      LG N 
Sbjct: 471 KSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG-NP 529

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            ADG+         P LV   K   + V +I+     Y   H   LT   +++ +G G  
Sbjct: 530 NADGK--------LPCLVED-KLTKDCVEEIAC--GAY---HVAVLTSRNEVFTWGKGAN 575

Query: 408 GQLGIELVNNQTERGNPERVD 428
           G+LG   V    +R  P  VD
Sbjct: 576 GRLGHGDVE---DRKAPTLVD 593



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 22/290 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHGT    W P+ I   L+G++I   + G   T
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 391

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  GQ++ FG  +FG   +G + T  V  P+ VESL  +  +  A G +  A +   
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 449

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+ +RLGH  +   ++P  +   +++    ++A G+   + 
Sbjct: 450 IVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT-FHRVACGHSLTVG 508

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   VY++G  + G+LG+ +  D K P L+E  +L       +A GA+H AV+  
Sbjct: 509 LT---TSGKVYTMGSTVYGQLGNPN-ADGKLPCLVED-KLTKDCVEEIACGAYHVAVLTS 563

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
              V TWG G  G LGHG+ E    P +V AL +    ++A G   T  +
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 41/319 (12%)

Query: 114 GQVYAFGK------DSFG-EAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           G VY +G+        FG +   G  G++  V  P+ +ES   + V   A G    A++S
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVS 288

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           R+G V+T+   +  RLGH     DV    L+ +L    +  +A G  +  A+        
Sbjct: 289 RQGEVFTWGEASGGRLGHGMG-KDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGE--- 344

Query: 226 VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           +Y+ G G    G LGHG+      P+ I    L  LQ   V+ G WH A++   G++ T+
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTGQLFTF 403

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDV 332
           G G +G LGHG++E    P+ V++L+ ++ I VA G +    + E            G +
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKL 463

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           +++G G+ + LGH       G++    L P  V++L  ++    +++  +S+     T  
Sbjct: 464 FTWGDGDKSRLGH-------GDKEPR-LKPTCVSAL--IDHTFHRVACGHSL-----TVG 508

Query: 393 LTESGKLYAFGAGDKGQLG 411
           LT SGK+Y  G+   GQLG
Sbjct: 509 LTTSGKVYTMGSTVYGQLG 527



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 33/275 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E  + PR + SL G+R I  A G      I
Sbjct: 387 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 446

Query: 111 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +            G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRL--KPTCVSALIDHTFHRVACGHS 504

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLAL 217
            T  L+  G+VYT       +LG+   PN     P L    L    V +IA G  ++  L
Sbjct: 505 LTVGLTTSGKVYTMGSTVYGQLGN---PNADGKLPCLVEDKLTKDCVEEIACGAYHVAVL 561

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAA 272
               S   V++ G G  G+LGHG   D K P L++  +  +++ +       AA   H  
Sbjct: 562 T---SRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKW 618

Query: 273 VVGQDGRVCT-------WGWGRYGCLGHGNEECES 300
           V G +   C+       +   R+ C   G   C S
Sbjct: 619 VSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 653


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W PR I   L+G++I   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G  + G+LG  +   +  P L+E  ++ +   + +A G++H AV+  
Sbjct: 314 LT---TSGKVWTMGNSVYGQLG--NLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    +   A G F T  ++  G +YT+  G  N   LGH T+     P  + G LE + 
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             QIA   C     A   S   +++ G G  G LGHG       PR +E   L  L+ + 
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240

Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A     +V Q       G++ TWG G    LGHG++E    P  V +L D  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   T  ++  G V++ G      LG N  +DG+         P LV   K  +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIAS 349

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V+QI+       + H   LT   +++ +G G  G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++ +  +YS+G N  GQLG G+ + +E  PR I+SL GI     AAG G
Sbjct: 141 QVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGG 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G ++ +G++ FG  + G+      + P L++SL++  ++    G   TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  ++V P  +   + NI V QIA G  + LA    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS +++K P +++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 9/295 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+++G  + G+    +     +  P+ ++SL +I +VQ A G+  +  LS+E  +
Sbjct: 100 NDKGQVFSWGHAAHGQIGVSI-AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           Y++      +LG  +E         + +L  IP   IAAG  +  AL    SG A++  G
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFGWG 215

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG    TD   P L++   L + + + +  G  H A + ++G V T+G G YG 
Sbjct: 216 RNKFGQLGLNDETDRSDPALLK--SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           LGH +   E  P+ V  L       +A G  +T   V   G +YSFG G +  LG
Sbjct: 274 LGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 32/358 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR         +     G   T  + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+V  FSWG+ A  ++G
Sbjct: 64  GQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIG 117

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 241
                + +     + +L +I +VQ+A G+ + LAL+ + +   +YS G    G+LG GS 
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSE 174

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           +  E  PR I+   L  +    +AAG  H+  +   G +  WG  ++G LG  +E   S 
Sbjct: 175 KRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P ++++L   K I++  G+  T  ++++G V++FG G    LGHN+ +     R    L 
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 418
             +VT          QI+         HT A    SG++Y+FG G  GQLGI   +N+
Sbjct: 293 GNIVT----------QIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGIGSTSNK 335



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG V+S+G  + GQ+G    E+  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S    +Y++G++ +G+   G +  K  ++P+ ++SL  I     A G   +  L+  G 
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRK-ESAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +  +P  LL +L +  ++ I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDETDRSDP-ALLKSLRSQKIIYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+   +  P +V+
Sbjct: 323 GNGQLGIGSTSNKKSPSMVK 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS A+T  G ++ +G N  GQLG     +   P  ++SL+  +II    G   T  
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAA 256

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
           ++  G V+ FG   +G  + G        +P+ V  L    V Q A G   T A +   G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSG 314

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
           R+Y+F  G + +LG  +  N   P  + G 
Sbjct: 315 RIYSFGLGGNGQLGIGSTSNKKSPSMVKGN 344


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 155/341 (45%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + I   A G     L++  G+V+ +G++S G   +GV   K V  P++VES
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--VKDVIQPRMVES 329

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    +   A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G LE 
Sbjct: 330 LAASSIGFVACGEFHTCAVTITGELYT--WGDGTHNAGLLGHGSDVSHWIPKRVSGPLEG 387

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V  +  G  +    A   S   +++ G G  G LGHG R +  +P+ +E   L  L+ 
Sbjct: 388 LQVTSVTCGPWH---TALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVE--SLSGLRT 442

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A V +            G++ TWG G    LGHG++E    P  V AL D
Sbjct: 443 IAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID 502

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V+S G      LG N  ADG+         P LV   K 
Sbjct: 503 YDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLG-NPSADGK--------IPCLVED-KL 552

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V ++S     Y   H   LT   ++Y +G G  G+LG
Sbjct: 553 FGESVEEVSC--GAY---HVVVLTSKNEVYTWGKGANGRLG 588



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 23/290 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHG+    W P+ +   L+G+++     G   T
Sbjct: 341 GEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHT 400

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++  GQ++ FG  +FG   +G +    ++ P+ VESL  +  +  A G + TA +   
Sbjct: 401 ALVTSMGQLFTFGDGTFGALGHGDREN--ISYPKEVESLSGLRTIAVACGVWHTAAVVEV 458

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    ++A G+   + 
Sbjct: 459 IVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYDFHKVACGHSITVG 517

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V+S+G  + G+LG+ S  D K P L+E  +L       V+ GA+H  V+  
Sbjct: 518 LTT--SGQ-VFSMGSTVYGQLGNPS-ADGKIPCLVED-KLFGESVEEVSCGAYHVVVLTS 572

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
              V TWG G  G LGHG+ E    P +V+AL D    ++A G +YT  +
Sbjct: 573 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAI 622



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 33/288 (11%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V  P+ +ES   + +   A G    A+++R+G V  F+WG ++  RLGH    + ++P  
Sbjct: 269 VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEV--FTWGEESGGRLGHGVVKDVIQPR- 325

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           ++ +L    +  +A G  +  A+      +  +  G    G LGHGS      P+ +   
Sbjct: 326 MVESLAASSIGFVACGEFHTCAVTIT-GELYTWGDGTHNAGLLGHGSDVSHWIPKRVSG- 383

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  LQ   V  G WH A+V   G++ T+G G +G LGHG+ E  S PK V++L+ ++ I
Sbjct: 384 PLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTI 443

Query: 315 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            VA G + T  V E            G ++++G G+   LGH       G++    L P 
Sbjct: 444 AVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGH-------GDKEPR-LKPT 495

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V +L  ++    +++  +SI     T  LT SG++++ G+   GQLG
Sbjct: 496 CVPAL--IDYDFHKVACGHSI-----TVGLTTSGQVFSMGSTVYGQLG 536


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 157/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G     L +  G+V+A+G++  G   +G      ++ P+LVE+
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEA 291

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH    +   P  + G LE 
Sbjct: 292 LAVSNVEYVACGEFHTCAITASGDLYT--WGDGYYNAGLLGHGAGTSHWLPKRVSGPLEG 349

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ ++ G  +    A   S   V++ G G  G LGHG+R    +P+ +E   L   + 
Sbjct: 350 VQVLSVSCGSWHS---ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVET--LSGFRT 404

Query: 262 VVVAAGAWHAAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A +     Q G      ++ TWG G    LGHG+++   VP  VQ+L D 
Sbjct: 405 IKVACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDY 464

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  +S  G V++ G   +  LG N  +DG   +H   +  +L   L   
Sbjct: 465 NFHQVACGHSMTIALSTSGHVFTMGSSSNGQLG-NPKSDG---KHPTPVQDRLAGEL--- 517

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              V +IS       + H   LT   ++Y +G G  G+LG
Sbjct: 518 ---VEEISCG-----SCHVAVLTSRSEVYTWGMGANGRLG 549



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 151/291 (51%), Gaps = 26/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+T+ G +Y++G    ++G LGHG     W P+ +   L+G++++  + G+  +
Sbjct: 303 GEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHS 362

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
            L + +G+V+ FG  +FG   +G + T  V  P+ VE+L     ++ A G + +A     
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHT--VAYPKEVETLSGFRTIKVACGLWHSAAIVET 420

Query: 163 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                  V+SR  +++T+  G+   LGH  +   + P   + +L +    Q+A G+   +
Sbjct: 421 TNQAGVNVISR--KLFTWGAGDKNPLGHGDKDARLVP-TCVQSLIDYNFHQVACGHSMTI 477

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL+   +   V+++G    G+LG+  ++D KHP  + Q +L       ++ G+ H AV+ 
Sbjct: 478 ALS---TSGHVFTMGSSSNGQLGN-PKSDGKHPTPV-QDRLAGELVEEISCGSCHVAVLT 532

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG  E +  P +V+AL D     +A G ++TT +
Sbjct: 533 SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 583



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 43/322 (13%)

Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           I   G VY +G+       + G A Y      ++  P+ +ES   + V Q A G    A+
Sbjct: 199 IESLGDVYVWGEVWTDMIPAEGSANYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 257

Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            +R+G V  F+WG +   RLGH T+ +   P  L+  L    V  +A G  +  A+    
Sbjct: 258 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYVACGEFHTCAITA-- 312

Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y+ G G    G LGHG+ T    P+ +    L  +Q + V+ G+WH+A+    G+
Sbjct: 313 SG-DLYTWGDGYYNAGLLGHGAGTSHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSSGK 370

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------- 331
           V T+G G +G LGHGN    + PK V+ L+  + I VA G + +  + E  +        
Sbjct: 371 VFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVIS 430

Query: 332 --VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
             ++++G G+   LGH       G++ A  L P  V SL   N    Q++  +S+     
Sbjct: 431 RKLFTWGAGDKNPLGH-------GDKDAR-LVPTCVQSLIDYN--FHQVACGHSM----- 475

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T AL+ SG ++  G+   GQLG
Sbjct: 476 TIALSTSGHVFTMGSSSNGQLG 497



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 141/336 (41%), Gaps = 29/336 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H    T +G V+++G    G+LGHGT  +  RP+ + +L    +   A G   
Sbjct: 247 QIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFH 306

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           T  I+ +G +Y +G   +     G   GT      ++   L+ + V+  + G++ +A+ +
Sbjct: 307 TCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTT 366

Query: 166 REGRVYTFSWGNDARLGH---HT--EPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--A 218
             G+V+TF  G    LGH   HT   P +VE      TL     +++A G  +  A+   
Sbjct: 367 SSGKVFTFGDGTFGALGHGNRHTVAYPKEVE------TLSGFRTIKVACGLWHSAAIVET 420

Query: 219 CQPSGMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
              +G+ V     ++ G G    LGHG +     P  ++     N     VA G      
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQ--VACGHSMTIA 478

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           +   G V T G    G LG+   + +    V   L       ++ G     V++   +VY
Sbjct: 479 LSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVY 538

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           ++G G +  LGH  + D +         P LV +LK
Sbjct: 539 TWGMGANGRLGHGGVEDKK--------KPTLVEALK 566


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 184/378 (48%), Gaps = 38/378 (10%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQ 99
           RR   + I    +S  VT K + + +GS   G+LG G  E+E    PR +   +   I Q
Sbjct: 58  RRLACEPIIAVEYS-TVTDKNM-FCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQ 115

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            A G   T+LI+  GQVY+ G + +G+  +     +L    QL+  L      + A G  
Sbjct: 116 IACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKVACGAH 171

Query: 160 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIAAGYCYLL 215
            T  ++  G++  FSWG++A  +LG +++ N +E  PH ++  L    VVQ+A G  ++L
Sbjct: 172 HTLAVNEWGQL--FSWGSNAEGQLGLNSK-NLIECVPH-MVRALGTSVVVQVACGINHVL 227

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           AL    +   +YS G    G+LG G+   +E  P+LI    L  +    +  G +H+  +
Sbjct: 228 ALT---NNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISS--LAGVPIAFITCGGYHSMAI 282

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            + G V  WG   +G LG  +    ++P+ +Q L + K  + A G+  +  ++ DG V++
Sbjct: 283 SKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFT 342

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            G G    LGH       GN  +N + P+ V  L  +   V QIS         HT  L 
Sbjct: 343 CGAGMYGQLGH-------GNT-SNEILPRQVMEL--MGSTVTQISCGKR-----HTLGLV 387

Query: 395 ES-GKLYAFGAGDKGQLG 411
            S G++YA+G G  GQLG
Sbjct: 388 PSRGRVYAWGLGGAGQLG 405



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 158/325 (48%), Gaps = 21/325 (6%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  +++ +T  G VYS G+N  GQLGH    +  R + I  L      + A G
Sbjct: 112 EIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKVACG 169

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTA 162
           A  T+ +++ GQ++++G ++  E + G+    L+   P +V +L    VVQ A G     
Sbjct: 170 AHHTLAVNEWGQLFSWGSNA--EGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227

Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+  G++Y++   +D +LG  T+  N+++P  L+ +L  +P+  I  G  +  ++A   
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPK-LISSLAGVPIAFITCGGYH--SMAISK 284

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           SG AV+  G    G+LG     +   PR ++  Q  N +    A G   +  +  DG V 
Sbjct: 285 SG-AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQ--NAKVCYAACGEEFSVFLTVDGGVF 341

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGES 340
           T G G YG LGHGN   E +P+ V  L       ++ G   T  +V   G VY++G G +
Sbjct: 342 TCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA 401

Query: 341 ASLGHNAIADGQGNRHANVLTPQLV 365
             LG+N           +V TPQ+V
Sbjct: 402 GQLGNNIT--------RSVATPQVV 418



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 25/225 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           + QIA G  Y + +        VYS G    G+LGH      K  +LI        + V 
Sbjct: 113 IEQIACGENYTVLIT---RDGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKV- 166

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYT 322
            A GA H   V + G++ +WG    G LG  ++   E VP +V+AL     + VA G   
Sbjct: 167 -ACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINH 225

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
              ++ +G +YS+G      LG        G    N + P+L++SL  V    +      
Sbjct: 226 VLALTNNGKLYSWGSNSDGQLG-------LGTDVKNEIKPKLISSLAGVPIAFITCG--- 275

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                 H+ A+++SG ++ +G    GQLG+   N+   R  P ++
Sbjct: 276 ----GYHSMAISKSGAVFGWGKNTFGQLGL---NDTRNRNLPRQL 313



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 29/207 (14%)

Query: 217 LACQPSGMAVYSV---------GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVA 265
           LAC+P     YS          G  + G+LG G   DE    PR ++  +   ++ +  A
Sbjct: 60  LACEPIIAVEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQI--A 117

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
            G  +  ++ +DG+V + G   YG LGH  E+     +++  L+      VA G + T  
Sbjct: 118 CGENYTVLITRDGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLA 175

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           V+E G ++S+G      LG N+       ++     P +V +L      VVQ++   +  
Sbjct: 176 VNEWGQLFSWGSNAEGQLGLNS-------KNLIECVPHMVRALG--TSVVVQVACGIN-- 224

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGI 412
              H  ALT +GKLY++G+   GQLG+
Sbjct: 225 ---HVLALTNNGKLYSWGSNSDGQLGL 248



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A++  G V+ +G N+ GQLG   T     PR +++LQ  ++  AA G   ++ ++  
Sbjct: 278 HSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVD 337

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G    +++  P+ V  L    V Q + G   T  ++   GRVY 
Sbjct: 338 GGVFTCGAGMYGQLGHGNTSNEIL--PRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYA 395

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
           +  G   +LG++   +   P  + G
Sbjct: 396 WGLGGAGQLGNNITRSVATPQVVHG 420


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G     L +  G+V+ +G++  G   +G      ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   + G F T  ++  G +  F+WG    N   LG  TE +   P  + G LE 
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +    A   S   +Y+ G G  G LGHG R    +P+ +E   L   + 
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417

Query: 262 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A    V  Q G      ++ TWG G    LGHG++E   VPK VQAL + 
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               +A G   T  ++  G V++ G   +  LG N  +DG+         P LV   +  
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLA 527

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +E V +IS   S     H   LT   ++Y +G G  G+LG
Sbjct: 528 SELVEEISCGAS-----HVTVLTSRSEVYTWGMGANGRLG 562



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G ++++G  S   G LG GT    W P+ +   L+G++++  A G+  +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            L + +G++Y FG  +FG   +G + T  +  P+ VE+L     ++ A G + +A +   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433

Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                      ++YT+  G+  RLGH  +   + P  +   LE     Q+A G+   +AL
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YDFHQLACGHNMTVAL 492

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A   +   V+++G    G+LG+  ++D K P L+ Q +L +     ++ GA H  V+   
Sbjct: 493 A---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLTSR 547

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
             V TWG G  G LGHG+ +    P +V+AL D     ++ G ++TT +
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 40/291 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q A G    A+ +R+G V+T  WG +   RLGH T+ +   P  
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRP-K 300

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
           L+ +L    V  I+ G  +  A+         G   Y+VG      LG G+      P+ 
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKK 355

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           +    L  LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+ 
Sbjct: 356 VSG-PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSG 414

Query: 311 VKAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            K I VA G + +  + E             +Y++G G+   LGH       G++    L
Sbjct: 415 FKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-L 466

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P+ V +L + +    Q++  +++     T AL  SG+++  G+   GQLG
Sbjct: 467 VPKCVQALLEYD--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +Y+FG  + G LGHG  E    P+ + +L G + I+ A G   +  I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          + ++Y +G        +G +  +LV  P+ V++L      Q A G+  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYDFHQLACGHNM 488

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  GRV+T    ++ +LG + + +  +P  +   L +  V +I+ G  ++  L   
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
            S   VY+ G G  G+LGHG   D K P L+E  +  +++ +   +        H  V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
            D  VCT       +   R+ C   G   C   S  KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 140/335 (41%), Gaps = 23/335 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H    T +G V+++G    G+LGHGT  +  RP+ + SL    +   + G  
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
            T  ++ +G ++ +G  S+     G         P+ V   L+ + V+  A G++ +A+ 
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
           +  G++YTF  G    LGH        P   +  L     +++A G  +  A+       
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKE-VEALSGFKTIKVACGIWHSAAIVEVTNQT 437

Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVG 275
                   +Y+ G G   +LGHG    +K PRL+ +    LL      +A G      + 
Sbjct: 438 GANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYDFHQLACGHNMTVALA 493

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             GRV T G    G LG+   + +    V   L       ++ G     V++   +VY++
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTW 553

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           G G +  LGH  + D +         P LV +LK 
Sbjct: 554 GMGANGRLGHGDLKDRK--------KPCLVEALKD 580


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 28/332 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  VT+ G +Y+FG N  GQLGHG T+   +P  ++ L+  ++   A G   T+  
Sbjct: 43  GDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAA 102

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +++G +Y+FG    G+  +G      V  P+++E L        A G+ F+A ++  G +
Sbjct: 103 TESGHLYSFGCGGDGQLGHGDAEDSHV--PKIIEGLDVQKYKHLACGSDFSAAITENGEL 160

Query: 171 YTFSWGNDAR----LGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           YT  WG+       LG  TE P  +  H          V  ++ GY Y +A+  +    +
Sbjct: 161 YT--WGSCGEGQNGLGEDTEIPTRLHLHG--------KVRMVSCGY-YHMAVVTEDG--S 207

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +Y  G   GGKLG      +   +L ++ + +  Q VV A GA   AVV ++G V T+G 
Sbjct: 208 LYMCGEKEGGKLGLDHEQLDNTSQL-QKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQ 266

Query: 286 GRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G  G LG G+   E+  P+ +     VKA  V+ G+  T V+++ G++Y+FG G    LG
Sbjct: 267 GNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLG 326

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
              + D      +N   P+ V        ++V
Sbjct: 327 ---LGD---ECFSNTFKPEKVKRFNNFTVKMV 352



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 50/326 (15%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF------VVQAAIGNFFTAV 163
           + ++G V+ FGK  F                   ++L N F      VV  + G+  +AV
Sbjct: 8   VPESGAVFTFGKTRF------------------ADNLANKFWIRDDAVVNLSCGDEHSAV 49

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           ++  G++YTF   +  +LGH    +  +P  ++  L+   V  +A G  +   +A   SG
Sbjct: 50  VTANGKLYTFGCNDWGQLGHGNTKSYTKP-SVVKKLKPEKVYMVACGRNH--TIAATESG 106

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             +YS GCG  G+LGHG   D   P++IE   +   + +  A G+  +A + ++G + TW
Sbjct: 107 H-LYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHL--ACGSDFSAAITENGELYTW 163

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G    G  G G +    +P  +     V+   V+ G Y   VV+EDG +Y  G  E   L
Sbjct: 164 GSCGEGQNGLGEDT--EIPTRLHLHGKVRM--VSCGYYHMAVVTEDGSLYMCGEKEGGKL 219

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G +         H  +     +  +K + ++VV  +          T  +T++G +Y FG
Sbjct: 220 GLD---------HEQLDNTSQLQKIKSIEDQVVVAACGAEF-----TAVVTKNGSVYTFG 265

Query: 404 AGDKGQLGIELVNNQTERGNPERVDI 429
            G++GQLG+     +TE   PER+ +
Sbjct: 266 QGNQGQLGLGSSMMETEF--PERIPL 289



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 151/335 (45%), Gaps = 34/335 (10%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++  + G   + +++  G++Y FG + +G+  +G   TK  T P +V+ LK   V   A 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHG--NTKSYTKPSVVKKLKPEKVYMVAC 94

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   T   +  G +Y+F  G D +LGH     D E   +   +E + V +     C    
Sbjct: 95  GRNHTIAATESGHLYSFGCGGDGQLGH----GDAEDSHVPKIIEGLDVQKYKHLACGSDF 150

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            A       +Y+ G    G+ G G  T+      I     L+ +  +V+ G +H AVV +
Sbjct: 151 SAAITENGELYTWGSCGEGQNGLGEDTE------IPTRLHLHGKVRMVSCGYYHMAVVTE 204

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           DG +   G    G LG  +E+ ++  ++  ++++ D + +  A G   T VV+++G VY+
Sbjct: 205 DGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVYT 263

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           FG G    LG        G+       P+ +   ++V  R V           + T  +T
Sbjct: 264 FGQGNQGQLG-------LGSSMMETEFPERIPLFEKVKARTVSCG-------ESFTAVIT 309

Query: 395 ESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 427
           + G LY FG G  G+LG+  E  +N  +   PE+V
Sbjct: 310 KHGNLYTFGDGRHGKLGLGDECFSNTFK---PEKV 341



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 20/275 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+IA T  G +YSFG    GQLGHG  E+   P+ I  L   +    A G+  +  I
Sbjct: 95  GRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAI 154

Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++ G++Y +G  S GE + G+ + T++ T   L   ++ +     + G +  AV++ +G 
Sbjct: 155 TENGELYTWG--SCGEGQNGLGEDTEIPTRLHLHGKVRMV-----SCGYYHMAVVTEDGS 207

Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +Y        +LG  H + ++      + ++E+    Q+    C     A      +VY+
Sbjct: 208 LYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED----QVVVAACGAEFTAVVTKNGSVYT 263

Query: 229 VGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G G  G+LG GS   E + P  I  F+   ++   V+ G    AV+ + G + T+G GR
Sbjct: 264 FGQGNQGQLGLGSSMMETEFPERIPLFE--KVKARTVSCGESFTAVITKHGNLYTFGDGR 321

Query: 288 YGCLGHGNEECES---VPKVVQALNDVKAIHVATG 319
           +G LG G +EC S    P+ V+  N+     V  G
Sbjct: 322 HGKLGLG-DECFSNTFKPEKVKRFNNFTVKMVTCG 355



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGR 106
           A  G   +  VT  G VY+FG  + GQLG G++  E   P  I   + ++    + G   
Sbjct: 245 AACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESF 304

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           T +I+  G +Y FG    G+   G +       P+ V+   N  V     G
Sbjct: 305 TAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 157/341 (46%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + ++Q A G     L++  G+++ +G++S G   +GV   K V  P+LVE+
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGV--GKNVIQPRLVEA 327

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           + +  V   A G F T  ++  G +YT  WG    N   LGH T+ +   P  + G LE 
Sbjct: 328 MASTTVDFVACGEFHTCAVTMAGELYT--WGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG 385

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   Q+A   C     A   S   +++ G G  G LGHG R +  +PR +E   L  L+ 
Sbjct: 386 L---QVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVES--LSGLRT 440

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A V +             ++ TWG G    LGHG+++    P  V  L D
Sbjct: 441 IAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLID 500

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G+V++ G      LG N  +DG+         P LV   K 
Sbjct: 501 SNFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLG-NPQSDGK--------VPCLVKD-KL 550

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 551 AGESVEEIAC--GAY---HVAVLTSKNEVYTWGKGANGRLG 586



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 144/283 (50%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHGT    W P+ I   L+G+++     G   T
Sbjct: 339 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT 398

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  +FG   +G +    V+ P+ VESL  +  +  A G + TA +   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRTIAVACGVWHTAAVVEV 456

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                       +++T+  G+  RLGH  +   +EP   +  L +    +IA G+   + 
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEP-TCVSLLIDSNFHRIACGHSLTVG 515

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G  + G+LG+  ++D K P L++  +L       +A GA+H AV+  
Sbjct: 516 LT---TSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEIACGAYHVAVLTS 570

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 571 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 613



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 19/235 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E    PR + SL G+R I  A G   T  +
Sbjct: 394 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAV 453

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           + +++ +G        +G +  +L   P  V  L +    + A G+ 
Sbjct: 454 VEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL--EPTCVSLLIDSNFHRIACGHS 511

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  L+  G V+T       +LG+      V P  +   L    V +IA G  ++  L  
Sbjct: 512 LTVGLTTSGEVFTMGSSVYGQLGNPQSDGKV-PCLVKDKLAGESVEEIACGAYHVAVLT- 569

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P L+E  +  +++   +A G+ ++A +
Sbjct: 570 --SKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK--YIACGSNYSAAI 620


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 148/291 (50%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +   G LGHG     W P+ I   L+GI +   A G   T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHT 427

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  +FG   +G +G+  VT P+ VESLK +  V+AA G + TA +   
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEV 485

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P   +  L +    +++ G+   +
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP-TCVAALVDPNFCRVSCGHSMTV 544

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    SG  VY++G  + G+LG+    D K P  +E  +L       +A GA+H AV+ 
Sbjct: 545 ALTT--SGH-VYTMGSPVYGQLGN-PHADGKVPVRVEG-KLSKSFVEEIACGAYHVAVLT 599

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V+AL D +   +A G   T  +
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 150/343 (43%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+++ +G++S G   +GV     V  P+LV++
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSD--VLQPKLVDA 356

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N  +   + G + T  ++  G +YT  WG    N   LGH  E +   P  + G LE 
Sbjct: 357 LGNTNIELVSCGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWIPKKINGPLEG 414

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  IA G  +   +    S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 415 IHVSSIACGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRGSVTMPREVES--LKGLRT 469

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E + VP  V AL 
Sbjct: 470 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALV 529

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D     V+ G   T  ++  G VY+ G      LG         N HA+   P  V    
Sbjct: 530 DPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPVRV---- 576

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 577 ---EGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 38/307 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G    A+++++G ++T  WG ++  RLGH  + + ++P  L+ 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFT--WGEESGGRLGHGVDSDVLQPK-LVD 355

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N  +  ++ G  +  A+      +  +  G    G LGHG+      P+ I    L 
Sbjct: 356 ALGNTNIELVSCGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLE 413

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    +A G WH AVV   G++ T+G G +G LGHG+    ++P+ V++L  ++ +  A
Sbjct: 414 GIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAA 473

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 474 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKETK-LVPTCV 525

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L  V+    ++S  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 526 AAL--VDPNFCRVSCGHSM-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPV 574

Query: 426 RVDIDLS 432
           RV+  LS
Sbjct: 575 RVEGKLS 581



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 23/254 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG       PR + SL+G+R ++AA G  
Sbjct: 418 SSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVW 477

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G    G   +G + TKLV  P  V +L +    +
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV--PTCVAALVDPNFCR 535

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            + G+  T  L+  G VYT       +LG+      V P  + G L    V +IA G  +
Sbjct: 536 VSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PVRVEGKLSKSFVEEIACGAYH 594

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
           +  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA  
Sbjct: 595 VAVLT---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAIC 651

Query: 269 WHAAVVGQDGRVCT 282
            H  V G D  +C+
Sbjct: 652 LHKWVSGFDQSMCS 665



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 14/170 (8%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           + D   P+ +E   +L++Q +  A G  HAA+V + G + TWG    G LGHG +     
Sbjct: 293 KMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQ 350

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PK+V AL +     V+ G+Y T  V+  GD+Y++G G      +N    G GN  ++ + 
Sbjct: 351 PKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGT-----YNFGLLGHGNEVSHWIP 405

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  K++N  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 406 -------KKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLG 448


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 30/360 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  +S A+T+ G +  +G    GQLG G  E+   PR   SL+   +IQ A    
Sbjct: 45  SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDR 102

Query: 106 RTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            T  I   G++Y +     GK   G+ E  +    +V+ P  V++L+   V+Q + G++ 
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKVIQVSCGSYH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+ + +  T+  G   RLG H +  D+    L+ +L  +P+ +I+ G  +   L   
Sbjct: 162 TGCLTDDKKALTWGLGLQGRLG-HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                +Y  G G  GKLG GS  D   PRL+E   L ++Q   V+ G+ H+A V + G+V
Sbjct: 221 GK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276

Query: 281 CTWGW-GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            TWG  GR G + +G E     PK +  L     + ++ G+  +  +S+ GD+Y++G   
Sbjct: 277 YTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM-- 334

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
           + ++GH     G    H N+ +   +      N+ +VQ+  ++S     H+ AL++ G L
Sbjct: 335 TKNIGH-----GIQGIHPNMPSKHPILQ----NKNIVQVVCSSS-----HSIALSDIGAL 380



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 178/354 (50%), Gaps = 36/354 (10%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTMLISDAGQ 115
           SK  V  +GS   GQ  HG+  EE  P P   + G+R    I + + G+  +  I+++G 
Sbjct: 6   SKSGVVVWGSTEYGQ--HGSKGEEVSPGP-HLVDGLRHLSSISKVSCGSNYSAAITNSGD 62

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G    G+  +G     LV  P++  SLKN  V+Q A  +  TA +   G +YT+  
Sbjct: 63  LILWGYGGCGQLGFGNLEDCLV--PRVNLSLKN--VIQVACSDRHTAAILSNGELYTWGC 118

Query: 176 GNDARLGH----HTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
             + +LGH     +  N+V   P+ +  LE   V+Q++ G  +     C        + G
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT---GCLTDDKKALTWG 175

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
            GL G+LGHG   D   P+LIE    L ++ +  + G  H A++   G++  +G G +G 
Sbjct: 176 LGLQGRLGHGDTQDIFTPKLIESLAGLPIKEI--SCGGHHTAILLVTGKLYMFGGGAFGK 233

Query: 291 LGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LG G+ +   +P++++  L D++   V+ G   +  V++ G VY++G G    LGH  I 
Sbjct: 234 LGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGH--IF 289

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           +G      + L+P+ +++L++    +V IS  NS     H+ AL++ G +Y +G
Sbjct: 290 NGP---EHDFLSPKRLSNLEKA--FIVDISCGNS-----HSVALSDVGDIYTWG 333



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 150/312 (48%), Gaps = 30/312 (9%)

Query: 124 FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 179
           +G  EYG  G+K   +   P LV+ L+++  + + + G+ ++A ++  G +  + +G   
Sbjct: 13  WGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LG     + + P   L +L+N  V+Q+A   C     A   S   +Y+ GC   GKLGH
Sbjct: 73  QLGFGNLEDCLVPRVNL-SLKN--VIQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126

Query: 240 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           G         ++ Q    + L  + V+ V+ G++H   +  D +  TWG G  G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +    PK++++L  +    ++ G + T ++   G +Y FG G    LG  +  D     
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDD----- 241

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
              VL P+L+         +  I +T     + H+ A+T+ GK+Y +G G  G+LG    
Sbjct: 242 ---VLIPRLLEG------PLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFN 290

Query: 416 NNQTERGNPERV 427
             + +  +P+R+
Sbjct: 291 GPEHDFLSPKRL 302



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 338
           V  WG   YG  G   EE    P +V  L  + +I  V+ G   +  ++  GD+  +G G
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               LG   + D         L P++  SLK     V+Q++ ++      HT A+  +G+
Sbjct: 70  GCGQLGFGNLED--------CLVPRVNLSLKN----VIQVACSDR-----HTAAILSNGE 112

Query: 399 LYAFGAGDKGQLG 411
           LY +G    G+LG
Sbjct: 113 LYTWGCSKNGKLG 125


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 187/392 (47%), Gaps = 64/392 (16%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA----AGAGRTMLISDAG 114
           T K  ++SFG NS G+LG  + ++++ P+PI S+Q +++   A    +G+  + +++ AG
Sbjct: 163 TKKAYIWSFGKNSDGELGISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSAIVTKAG 221

Query: 115 QVYAFGKDSFGEAEYGVQGTK-----LVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREG 168
           ++Y  G    G+   G+Q          T   + + +K N  V Q A G++ T  L ++G
Sbjct: 222 ELYVSGSQLHGKL--GIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDG 279

Query: 169 RVYTFSWGN--DARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +V  F+WG     ++G  + +  + EP  + G L+   +V I  G  + +AL  Q     
Sbjct: 280 QV--FAWGGTLHKKVGEKNAQAQNNEPRIVSG-LQGKQIVHIDCGDFHSVALDIQGR--- 333

Query: 226 VYSVGCG----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
           VYS G G      G+ GHG+  D + P  ++   + + + V ++AG +H  A+  +D  +
Sbjct: 334 VYSWGGGGASYNKGQCGHGNNEDIEQPIQVQ--GIAHRKIVQISAGGFHTLALCEEDNEL 391

Query: 281 CTWGWGRYGCLGHGNEECESVPKVV---------QALNDVKA-----------IHVATGD 320
             WG G YG  G G  +  S PK+V         Q +N ++              ++ G 
Sbjct: 392 YAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGG 451

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
           + T +++  G VYSFG G    LG  +          N  +PQLV  L   N + +    
Sbjct: 452 HHTLLLTSRGRVYSFGYGSHGQLGLRST--------KNFCSPQLVKDLLSKNIKAIAAG- 502

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                WN H+  L++ G L+A G G+ GQLG+
Sbjct: 503 -----WN-HSLILSDKGDLFACGYGNHGQLGL 528



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 46/332 (13%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRI----IQAAAG 103
           +G  HS  VT  G +Y  GS   G+LG  +       +   +    GI++     Q A G
Sbjct: 209 SGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACG 268

Query: 104 AGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
              T+ +   GQV+A+G       GE     Q  +    P++V  L+   +V    G+F 
Sbjct: 269 DYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNE----PRIVSGLQGKQIVHIDCGDFH 324

Query: 161 TAVLSREGRVYTFSWG------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           +  L  +GRVY  SWG      N  + GH    +  +P  + G + +  +VQI+AG  + 
Sbjct: 325 SVALDIQGRVY--SWGGGGASYNKGQCGHGNNEDIEQPIQVQG-IAHRKIVQISAGGFHT 381

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE----------------QFQLLN 258
           LAL C+     +Y+ G G  G+ G G       P++++                +F   +
Sbjct: 382 LAL-CEEDN-ELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSS 439

Query: 259 LQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAI 314
            +P++  ++AG  H  ++   GRV ++G+G +G LG  + +    P++V+ L   ++KAI
Sbjct: 440 QKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAI 499

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             A G   + ++S+ GD+++ G G    LG N
Sbjct: 500 --AAGWNHSLILSDKGDLFACGYGNHGQLGLN 529



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 39/358 (10%)

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           E+ +P    +L+ I  I       +         +++FGK+S GE     Q  + +  P 
Sbjct: 141 EQQKPYSESNLENISEIAKEIKTKKAY-------IWSFGKNSDGELGISSQKDQFLPKPI 193

Query: 142 LVESLKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPH 193
            +++LK     +  + G+  +A++++ G +Y        +LG       H ++   V   
Sbjct: 194 SIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTM- 252

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH-GSRTDEKHPRLIE 252
              G   N  V Q+A G  + L   C      V++ G  L  K+G   ++     PR++ 
Sbjct: 253 -FDGIKVNQKVKQVACGDYHTL---CLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVS 308

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG----RYGCLGHGNEECESVPKVVQAL 308
             Q    Q V +  G +H+  +   GRV +WG G      G  GHGN E    P  VQ +
Sbjct: 309 GLQ--GKQIVHIDCGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGI 366

Query: 309 NDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT-PQLVT 366
              K + ++ G + T  +  ED ++Y++G G   + G   + + Q +    ++  P+   
Sbjct: 367 AHRKIVQISAGGFHTLALCEEDNELYAWGSG---TYGECGLGEFQASSKPKIVKMPKDFV 423

Query: 367 SLKQVNERVVQISLTNSIYW-------NAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
           S +++N+   + + ++             HT  LT  G++Y+FG G  GQLG+    N
Sbjct: 424 SNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKN 481



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 45/284 (15%)

Query: 51  GPGHSIAVTSKGVVYSFG----SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           G  HS+A+  +G VYS+G    S + GQ GHG  E+  +P  ++ +   +I+Q +AG   
Sbjct: 321 GDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFH 380

Query: 107 TM-LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           T+ L  +  ++YA+G  ++GE   G+   +  + P++V+  K+    Q          ++
Sbjct: 381 TLALCEEDNELYAWGSGTYGEC--GLGEFQASSKPKIVKMPKDFVSNQE---------MN 429

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +    + FS                   PL        + QI+AG  + L L    S   
Sbjct: 430 QMQNEFAFS----------------SQKPL--------ITQISAGGHHTLLLT---SRGR 462

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VYS G G  G+LG  S  +   P+L++   LL+     +AAG  H+ ++   G +   G+
Sbjct: 463 VYSFGYGSHGQLGLRSTKNFCSPQLVKD--LLSKNIKAIAAGWNHSLILSDKGDLFACGY 520

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           G +G LG  ++E  +    V  L    A ++  G   ++VV +D
Sbjct: 521 GNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWVVIDD 564



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 48/81 (59%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  H++ +TS+G VYSFG  S GQLG  +T+    P+ ++ L    I   AAG  
Sbjct: 445 TQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWN 504

Query: 106 RTMLISDAGQVYAFGKDSFGE 126
            ++++SD G ++A G  + G+
Sbjct: 505 HSLILSDKGDLFACGYGNHGQ 525


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 159/339 (46%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + +   A G     L++  G+V+ +G++S G   +GV   K V  P+LVE+
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV--GKNVVQPRLVEA 326

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L +  +   A G F +  ++  G +YT+  G  N   LGH +  +   P  + G LE + 
Sbjct: 327 LISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQ 386

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           +  +A G  +   +    S   +++ G G  G LGHG R +  +PR +E   LL L+ + 
Sbjct: 387 IAFVACGPWHTALIT---STGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIA 441

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E    P  V AL D  
Sbjct: 442 VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYN 501

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G V++ G      LG ++++DG+         P LV   K   
Sbjct: 502 FHKIACGHSLTVGLTTSGRVFTMGSTVYGQLG-SSLSDGK--------VPCLVGD-KIAG 551

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E + +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 552 ESIEEIAC--GAY---HVAVLTSKNEVYTWGKGANGRLG 585



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 145/283 (51%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AVT  G +Y++G   +++G LGHG+    W P+ I   L+G++I   A G   T
Sbjct: 338 GEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHT 397

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  +FG   +G +  + V+ P+ VESL  +  +  A G + TA +   
Sbjct: 398 ALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEV 455

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   + 
Sbjct: 456 IATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVSALIDYNFHKIACGHSLTVG 514

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V+++G  + G+LG  S +D K P L+   ++       +A GA+H AV+  
Sbjct: 515 LTT--SGR-VFTMGSTVYGQLG-SSLSDGKVPCLVGD-KIAGESIEEIACGAYHVAVLTS 569

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 37/294 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           P+ +ES   + V   A G    ++++R+G V+T+   +  RLGH    N V+P  L+  L
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPR-LVEAL 327

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 255
            +  +  +A G  +  A+      MA  +Y+ G G+   G LGHGS      P+ I    
Sbjct: 328 ISTTIDFVACGEFHSCAVT-----MAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAG-P 381

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
           L  LQ   VA G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L  ++ I 
Sbjct: 382 LEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA 441

Query: 316 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           VA G + T  V E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 442 VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGH-------GDKEAR-LKPTC 493

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           V++L   N    +I+  +S+     T  LT SG+++  G+   GQLG  L + +
Sbjct: 494 VSALIDYN--FHKIACGHSL-----TVGLTTSGRVFTMGSTVYGQLGSSLSDGK 540



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 19/235 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  +    PR + SL G+R I  A G   T  +
Sbjct: 393 GPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           +G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARL--KPTCVSALIDYNFHKIACGHS 510

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  L+  GRV+T       +LG       V P  +   +    + +IA G  ++  L  
Sbjct: 511 LTVGLTTSGRVFTMGSTVYGQLGSSLSDGKV-PCLVGDKIAGESIEEIACGAYHVAVLT- 568

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P L+E  +  +++   +A G+ ++A +
Sbjct: 569 --SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK--YIACGSNYSAAI 619


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G     L +  G+V+ +G++  G   +G      ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   + G F T  ++  G +  F+WG    N   LG  TE +   P  + G LE 
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +    A   S   +Y+ G G  G LGHG R    +P+ +E   L   + 
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417

Query: 262 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A    V  Q G      ++ TWG G    LGHG++E   VPK VQAL + 
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               +A G   T  ++  G V++ G   +  LG N  +DG+         P LV   +  
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLA 527

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +E V +IS   S     H   LT   ++Y +G G  G+LG
Sbjct: 528 SELVEEISCGAS-----HVTVLTSRSEVYTWGMGANGRLG 562



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 26/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G ++++G  S   G LG GT    W P+ +   L+G++++  A G+  +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
            L + +G++Y FG  +FG   +G + T  +  P+ VE+L     ++ A G + +A     
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433

Query: 163 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                  V+S+  ++YT+  G+  RLGH  +   + P  +   LE     Q+A G+   +
Sbjct: 434 TNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YNFHQLACGHNMTV 490

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           ALA   +   V+++G    G+LG+  ++D K P L+ Q +L +     ++ GA H  V+ 
Sbjct: 491 ALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLT 545

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG+ +    P +V+AL D     ++ G ++TT +
Sbjct: 546 SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 40/291 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q A G    A+ +R+G V+T  WG +   RLGH T+ +   P  
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRP-K 300

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
           L+ +L    V  I+ G  +  A+         G   Y+VG      LG G+      P+ 
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKK 355

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           +    L  LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+ 
Sbjct: 356 VSG-PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSG 414

Query: 311 VKAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            K I VA G + +  + E             +Y++G G+   LGH       G++    L
Sbjct: 415 FKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-L 466

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P+ V +L + N    Q++  +++     T AL  SG+++  G+   GQLG
Sbjct: 467 VPKCVQALLEYN--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +Y+FG  + G LGHG  E    P+ + +L G + I+ A G   +  I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          + ++Y +G        +G +  +LV  P+ V++L      Q A G+  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYNFHQLACGHNM 488

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  GRV+T    ++ +LG + + +  +P  +   L +  V +I+ G  ++  L   
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
            S   VY+ G G  G+LGHG   D K P L+E  +  +++ +   +        H  V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
            D  VCT       +   R+ C   G   C   S  KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 23/334 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H    T +G V+++G    G+LGHGT  +  RP+ + SL    +   + G  
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
            T  ++ +G ++ +G  S+     G         P+ V   L+ + V+  A G++ +A+ 
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
           +  G++YTF  G    LGH        P  +   L     +++A G  +  A+       
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQT 437

Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVG 275
                   +Y+ G G   +LGHG    +K PRL+ +    LL      +A G      + 
Sbjct: 438 GANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             GRV T G    G LG+   + +    V   L       ++ G     V++   +VY++
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTW 553

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           G G +  LGH  + D +         P LV +LK
Sbjct: 554 GMGANGRLGHGDLKDRK--------KPCLVEALK 579


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++ +  +YS+G N  GQLG G+ + +E  PR I+SL GI     AAG G
Sbjct: 141 QVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGG 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G ++ +G++ FG  + G+      + P L++SL++  ++    G   TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  ++V P  +   + NI V QIA G  + LA    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS +++K P +++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 9/295 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+++G  + G+    +     +  P+ ++SL +I +VQ A G+  +  LS+E  +
Sbjct: 100 NDKGQVFSWGHAAHGQIGVSI-AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           Y++      +LG  +E         + +L  IP   IAAG  +  AL    SG A++  G
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFGWG 215

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG    TD   P L++   L + + + +  G  H A + ++G V T+G G YG 
Sbjct: 216 RNKFGQLGLNDETDRSDPALLK--SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           LGH +   E  P+ V  L       +A G  +T   V   G +YSFG G +  LG
Sbjct: 274 LGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 32/358 (8%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR         +     G   T  + D G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+V  FSWG+ A  ++G
Sbjct: 64  GQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIG 117

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 241
                + +     + +L +I +VQ+A G+ + LAL+ + +   +YS G    G+LG GS 
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSE 174

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           +  E  PR I+   L  +    +AAG  H+  +   G +  WG  ++G LG  +E   S 
Sbjct: 175 KRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P ++++L   K I++  G+  T  ++++G V++FG G    LGHN+ +     R    L 
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 418
             +VT          QI+         HT A    SG++Y+FG G  GQLGI   +N+
Sbjct: 293 GNIVT----------QIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGIGSTSNK 335



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG V+S+G  + GQ+G    E+  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S    +Y++G++ +G+   G +  K  ++P+ ++SL  I     A G   +  L+  G 
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRK-ESAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +  +P  LL +L +  ++ I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLGLNDETDRSDP-ALLKSLRSQKIIYICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      +A G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+   +  P +V+
Sbjct: 323 GNGQLGIGSTSNKKSPSMVK 342



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS A+T  G ++ +G N  GQLG     +   P  ++SL+  +II    G   T  
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAA 256

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
           ++  G V+ FG   +G  + G        +P+ V  L    V Q A G   T A +   G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSG 314

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
           R+Y+F  G + +LG  +  N   P  + G 
Sbjct: 315 RIYSFGLGGNGQLGIGSTSNKKSPSMVKGN 344


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 183/401 (45%), Gaps = 60/401 (14%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWR----------PRPIRSLQGIRIIQAAAGAGRTML 109
           S+ VV +FG N  GQLG G                 P+ I +L    I+  + G+  TM 
Sbjct: 4   SECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMA 63

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSRE 167
           ++ +G VY++G  S G+  +G    K++  PQ +   +   + V   + G   +A ++++
Sbjct: 64  LTSSGAVYSWGWGSMGQLGHG--DLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKD 121

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIP-------VVQIAAGYCYLLALAC 219
           G +Y   WG ++  G    P + E  H  L     +P       +V+++ G  +  AL  
Sbjct: 122 GTLYV--WG-ESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT- 177

Query: 220 QPSGMAVYSVGCGLGGKLGHGS----------RTDEKHPRLIEQFQLLNLQPVV-VAAGA 268
             S   VY  G G  G+LG GS                P L++ F   N + VV VA GA
Sbjct: 178 --SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAF---NGEKVVQVACGA 232

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           +H+A V + G V  WG   YG LG G    + +PK ++  +D+  + V+ G + T VV++
Sbjct: 233 FHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAK 292

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            GD Y+FG GE   LG   + D +         P LV +LK   + V+Q +   S     
Sbjct: 293 SGDCYAFGRGEYGRLG---LGDTKSRTR-----PHLVKALK--GKTVIQAACGGS----- 337

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           HT  +T  G  Y  G  D G+LG+    +    G P R+D+
Sbjct: 338 HTLFVTSDGTAYVAGRPDHGRLGLA---DMKALGVPTRLDL 375



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 141/310 (45%), Gaps = 22/310 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRTM 108
           G  H++A+TS G VYS+G  S GQLGHG  +    P+ I   +  R  +   + G   + 
Sbjct: 57  GSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSA 116

Query: 109 LISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            ++  G +Y +G+  +G+     EY      L     + E      +V+ + G   TA L
Sbjct: 117 AVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAAL 176

Query: 165 SREGRVYTFSWGNDARLG----HHTEPND------VEPHPLLGTLENIPVVQIAAGYCYL 214
           +  GRVY +  G+  +LG       +P +        PH LL       VVQ+A G  + 
Sbjct: 177 TSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPH-LLKAFNGEKVVQVACGAFHS 235

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            A+  Q     VY  G    G LG G  +D++ P+ +E F   ++  + V+ G WH  VV
Sbjct: 236 AAVTEQGH---VYVWGKEDYGMLGVGQSSDQQIPKRLEYFD--DIPVLRVSCGGWHTVVV 290

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            + G    +G G YG LG G+ +  + P +V+AL     I  A G   T  V+ DG  Y 
Sbjct: 291 AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYV 350

Query: 335 FGCGESASLG 344
            G  +   LG
Sbjct: 351 AGRPDHGRLG 360



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS AVT +G VY +G    G LG G + ++  P+ +     I +++ + G   
Sbjct: 227 QVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWH 286

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T++++ +G  YAFG+  +G    G+  TK  T P LV++LK   V+QAA G   T  ++ 
Sbjct: 287 TVVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTS 344

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +G  Y     +  RLG         P  L   L  IPV Q +AG  + +AL
Sbjct: 345 DGTAYVAGRPDHGRLGLADMKALGVPTRL--DLGPIPVRQFSAGGAHSVAL 393



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 20/263 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQ-----GIRIIQAAAGAGRT 107
           HS AVT  G +Y +G +  GQLG     E      P++        G  I++ + G   T
Sbjct: 114 HSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHT 173

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKL--------VTSPQLVESLKNIFVVQAAIGNF 159
             ++  G+VY +G+   G+   G    K          + P L+++     VVQ A G F
Sbjct: 174 AALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAF 233

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A ++ +G VY +   +   LG   + +D +    L   ++IPV++++ G  + + +A 
Sbjct: 234 HSAAVTEQGHVYVWGKEDYGMLG-VGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVA- 291

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG   Y+ G G  G+LG G       P L++  +   +  +  A G  H   V  DG 
Sbjct: 292 -KSG-DCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTV--IQAACGGSHTLFVTSDGT 347

Query: 280 VCTWGWGRYGCLGHGNEECESVP 302
               G   +G LG  + +   VP
Sbjct: 348 AYVAGRPDHGRLGLADMKALGVP 370



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ V   G  Y+FG    G+LG G T+   RP  +++L+G  +IQAA G   T+ ++  
Sbjct: 286 HTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSD 345

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           G  Y  G+   G    G+   K +  P  ++ L  I V Q + G   +  L    R
Sbjct: 346 GTAYVAGRPDHG--RLGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVALMHSSR 398


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 181/365 (49%), Gaps = 43/365 (11%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +N  AIA G  H++A+   G V+S+G+N+ GQLG+GT +  + P  ++ L    +++A  
Sbjct: 393 DNVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEA-- 450

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G+  ++ +   G V+ +G   F E+ +  + TK + SP  ++  K   + + A G  +  
Sbjct: 451 GSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 221
           VL ++G ++    GND      T+ + V     L  L+NI  V+ IAAGY + LA+    
Sbjct: 508 VLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG 564

Query: 222 SGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQDG 278
           +   V+S G   L  K        +K+    E+  ++  L  VV VAAG +H+  + +DG
Sbjct: 565 T---VWSWGDTNLDNK--------KKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG 613

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            V +WG+  YG LG+G  E   VP  V+ LN+V AI  A GDY +  + +DG V+ +G  
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGSN 671

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               LG   I             P  V  L    + VV I+  ++     H+ AL + G 
Sbjct: 672 IRGQLGRRNIEFST--------VPLKVEKL----DNVVAIAAGDT-----HSVALKKDGT 714

Query: 399 LYAFG 403
           ++ +G
Sbjct: 715 VWVWG 719



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 192/414 (46%), Gaps = 53/414 (12%)

Query: 29  LVLRFL---LAGEACCRRENSQAI-----------AGPGHSIAVTSKGVVYSFGSNSSGQ 74
           L+  FL   L+      +ENS+ +           AG  H++A+   G V+++G N  GQ
Sbjct: 14  LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQ 73

Query: 75  LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 134
           LG+GT ++   P  ++ L+   ++  +AG   ++ +   G V+ +G  ++G+ +  V   
Sbjct: 74  LGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVY-- 129

Query: 135 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
           +  T+P  V+ LKNI  + A  G  F+  +  +G V+ +   N   LG  +      P  
Sbjct: 130 RDFTTPVKVKELKNIVAIAA--GWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVK 187

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           + G  +   VV ++AG  + LAL    +   V+S G    G+LG+  R  E +   +   
Sbjct: 188 VKGLKD---VVAVSAGLYHSLALKRDGT---VWSWGYNEDGELGN--RPTEDYTVSVP-V 238

Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
           ++  L  V+ ++AG +H+  + +DG V  WG G      +G  +   +P  ++ LN V A
Sbjct: 239 RVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGI--IEKNGKIDNSYIPVRIRWLNKVVA 296

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           I  A G   +  + +DG V+ +G      LG N         H+ +L    V  LK    
Sbjct: 297 I--AAGYRHSIALKDDGTVWVWGHNSYGVLGSNV------GEHSFLLVQ--VKGLKN--- 343

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            VV ++         H+ ALT++G ++A+G    GQLG E  NN      P +V
Sbjct: 344 -VVAVAAG-----RLHSVALTKNGTIWAWGNNAFGQLGRE--NNSFSLNLPYKV 389



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 66/339 (19%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+S+G N  G+LG+  TE+     P+R      +I  +AG   ++ 
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIA 258

Query: 110 ISDAGQVYAFG--------------------------------------KDS-----FGE 126
           ++  G V+ +G                                      KD      +G 
Sbjct: 259 LNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGH 318

Query: 127 AEYGVQGTKLVTSPQL---VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RL 181
             YGV G+ +     L   V+ LKN  VV  A G   +  L++ G ++  +WGN+A  +L
Sbjct: 319 NSYGVLGSNVGEHSFLLVQVKGLKN--VVAVAAGRLHSVALTKNGTIW--AWGNNAFGQL 374

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G       +     +  L+N  VV IA G  + LA+    +   V+S G    G+LG+G+
Sbjct: 375 GRENNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGT---VWSWGANNKGQLGNGT 429

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES- 300
                 P  ++         V+V AG+ H+  V +DG V  WG+          ++  S 
Sbjct: 430 YKSSYIPTCVKGLN----NAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSP 485

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           +P  +  LND+  I  A G     V+ +DG+++  GCG 
Sbjct: 486 LPIKIGKLNDITEI--AGGLDYILVLRKDGNIW--GCGN 520


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W P+ I  +L G+ +   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G      ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  + + ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
             C  +   V S+G  + G+LG+   +D + P L+E  ++     + VA G++H AV+  
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGN-PNSDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ 
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDG 183

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +PV  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ 
Sbjct: 184 LPVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKT 238

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID 298

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V S G         N++    GN +++   P LV   + 
Sbjct: 299 YDFYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RI 348

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 349 AGEHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 384



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 35  GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           R G V+T  WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 94  RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147

Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
             +Y+ G G    G LGHG+      P+ I    L  L    V+ G WH A++   G++ 
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 330
           T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E            G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+     T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311

Query: 391 FALTESGKLYAFGAGDKGQLG 411
             LT SGK+ + G    GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 13/292 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  H++ +T  G V+S G+N   QLGH   ++  +P  +  L   RI + + G  
Sbjct: 37  SQVTMGENHTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGN 94

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+  ++ GQ++ +G DS G+   G  GT     P++++SL    +VQ + G   +  L+
Sbjct: 95  HTLAFNEWGQLFGWGSDSHGQL--GFNGTT-QPLPKIIKSLATFHIVQISCGKNHSLALT 151

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             G +Y++    D +LG     ++ E  P L+ +L  IP+  IA G  +  AL+   SG 
Sbjct: 152 NNGELYSWGGNYDGQLGLGMR-SEYEKQPTLIKSLLGIPIAFIACGSNHSFALS--KSG- 207

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           A+Y  G    G+LG     ++ HP  ++  + + ++   +A G   +A +  DG V T G
Sbjct: 208 AIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVK--YIACGEDFSAFLSADGGVFTCG 265

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
            G YG LGHG+   E +P+ +  L       V+ G  +T  +V   G VYSF
Sbjct: 266 AGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 36/346 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS   G+LG G  E +    PI         + Q   G   T++++ +G+V++ G 
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           +   +  +  Q TK    P+ VE L    + + + G   T   +  G++  F WG+D+  
Sbjct: 61  NDLDQLGHKKQRTK----PEKVEGLDFYRITKISCGGNHTLAFNEWGQL--FGWGSDSHG 114

Query: 180 RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
           +LG +      +P P ++ +L    +VQI+ G  + LAL    +   +YS G    G+LG
Sbjct: 115 QLGFN---GTTQPLPKIIKSLATFHIVQISCGKNHSLALT---NNGELYSWGGNYDGQLG 168

Query: 239 HGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            G R++ EK P LI+   LL +    +A G+ H+  + + G +  WG   YG LG  +EE
Sbjct: 169 LGMRSEYEKQPTLIKS--LLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEE 226

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
            +  P  ++ L  ++  ++A G+  +  +S DG V++ G G    LGH +         +
Sbjct: 227 NKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGST--------S 278

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 402
           N + P+ +  L  +   V Q+S         HT AL  S G++Y+F
Sbjct: 279 NEILPRKIMEL--MGSTVTQVSCGKR-----HTLALVPSRGRVYSF 317



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 19/177 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS A++  G +Y +G N+ GQLG    E +  P  +++L+ IR+   A G   +  +
Sbjct: 196 GSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
           S  G V+  G   +G+  +G    +++  P+ +  L    V Q + G   T A++   GR
Sbjct: 256 SADGGVFTCGAGMYGQLGHGSTSNEIL--PRKIMELMGSTVTQVSCGKRHTLALVPSRGR 313

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG----------------TLENIPVVQIAAG 210
           VY+F  G   +LG   + N   P  +LG                T EN+ V  I +G
Sbjct: 314 VYSFGLGGGGQLGTRVKTNCSTPQVVLGPWVSPSGVPVITDKKKTSENVLVTHIFSG 370



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 35/267 (13%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH---HTEPNDVEPHPLLGTLENIPVV 205
           V Q  +G   T +L++ G V  FS GN+   +LGH    T+P  VE       L+   + 
Sbjct: 36  VSQVTMGENHTVMLTKSGEV--FSCGNNDLDQLGHKKQRTKPEKVE------GLDFYRIT 87

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           +I+ G  + LA         ++  G    G+LG    T +  P++I+     ++  V ++
Sbjct: 88  KISCGGNHTLAFN---EWGQLFGWGSDSHGQLGFNGTT-QPLPKIIKSLATFHI--VQIS 141

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 324
            G  H+  +  +G + +WG    G LG G   E E  P ++++L  +    +A G   +F
Sbjct: 142 CGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSF 201

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            +S+ G +Y +G      LG N           N L P  + +L+ +  + +      S 
Sbjct: 202 ALSKSGAIYGWGKNTYGQLGLND--------EENKLHPTQLKTLRSIRVKYIACGEDFSA 253

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLG 411
           +       L+  G ++  GAG  GQLG
Sbjct: 254 F-------LSADGGVFTCGAGMYGQLG 273



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 22/202 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G     +LGH  +     P  +E      +  +  + G  H     + G++  WG 
Sbjct: 55  VFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKI--SCGGNHTLAFNEWGQLFGWGS 110

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             +G LG  N   + +PK++++L     + ++ G   +  ++ +G++YS+G      LG 
Sbjct: 111 DSHGQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG- 168

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                  G R      P L+ SL       + I +      + H+FAL++SG +Y +G  
Sbjct: 169 ------LGMRSEYEKQPTLIKSL-------LGIPIAFIACGSNHSFALSKSGAIYGWGKN 215

Query: 406 DKGQLGIELVNNQTERGNPERV 427
             GQLG+   N++  + +P ++
Sbjct: 216 TYGQLGL---NDEENKLHPTQL 234


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 179/376 (47%), Gaps = 47/376 (12%)

Query: 58  VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + S G VY +G   + G L  GT  +E        PRP+ S   + + Q   G     L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G+V+ +G++  G   +G+Q    ++ P+LVE L    +   A G + T V+S  G +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324

Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             FSWG    N   LGH ++ +   P  + G LE + V+ +A G  +  ALA   +   +
Sbjct: 325 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 379

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
           ++ G G  G LGHG+R    +P+   + Q LN L+ V VA   WH A    V+GQ G   
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPK---EVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSM 436

Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
              ++ TWG G    LGHGN+E   +P  V +L D     +A G   T  ++  G V++ 
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 496

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G      LG N+I+DG+         P LV   + V E V +I+  +      H   LT 
Sbjct: 497 GGTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIACGDH-----HVAVLTS 541

Query: 396 SGKLYAFGAGDKGQLG 411
             +++ +G G  G+LG
Sbjct: 542 RSEVFTWGKGANGRLG 557



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 69/327 (21%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q + G  H   VT +G V+++G    G+LGHG   +  RP+ +  L    I   A G   
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYH 314

Query: 107 TMLISDAGQVYAFGKD-------------------------------------------- 122
           T ++S +G ++++G                                              
Sbjct: 315 TCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALAT 374

Query: 123 ------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG- 168
                 +FG+  +GV G    + V+ P+ V+SL  +  V+ A   + TA    V+ + G 
Sbjct: 375 ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGT 434

Query: 169 -----RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
                +++T+  G+  RLGH  +   + P   + +L +    +IA G+ + +AL    SG
Sbjct: 435 SMSSRKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTVALTT--SG 491

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V+++G    G+LG+ S +D K P L+ Q +L+      +A G  H AV+     V TW
Sbjct: 492 H-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGDHHVAVLTSRSEVFTW 548

Query: 284 GWGRYGCLGHGNEECESVPKVVQALND 310
           G G  G LGHG+ E +  P  V+AL D
Sbjct: 549 GKGANGRLGHGDTEDKRTPTCVEALRD 575


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 30/360 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  +S A+T+ G +  +G    GQLG G  E+   PR   SL+   ++Q A    
Sbjct: 45  SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDR 102

Query: 106 RTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            T  I   G++Y +     GK   G+ E  +    +V+ P  V++L+   V+Q + G++ 
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKVIQVSCGSYH 161

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+ + +  T+  G   RLG H +  D+    L+ +L  +P+ +I+ G  +   L   
Sbjct: 162 TGCLTDDKKALTWGLGLQGRLG-HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                +Y  G G  GKLG GS  D   PRL+E   L ++Q   V+ G+ H+A V + G+V
Sbjct: 221 GK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276

Query: 281 CTWGW-GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            TWG  GR G + +G E     PK +  L     + ++ G+  +  +S+ GD+Y++G   
Sbjct: 277 YTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM-- 334

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
           + ++GH     G    H N+ +   +      N+ +VQ+  ++S     H+ AL++ G L
Sbjct: 335 TKNIGH-----GIQGIHPNMPSKHPILQ----NKNIVQVVCSSS-----HSIALSDIGAL 380



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 36/354 (10%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTMLISDAGQ 115
           SK  V  +GS+  GQ  HG+  EE  P P   + G+R    I + + G+  +  I+++G 
Sbjct: 6   SKSGVVVWGSSEYGQ--HGSKGEEVSPGP-HLVDGLRHLSSISKVSCGSNYSAAITNSGD 62

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G    G+  +G     LV  P++  SLKN  VVQ A  +  TA +   G +YT+  
Sbjct: 63  LILWGYGGCGQLGFGNLEDCLV--PRVNLSLKN--VVQVACSDRHTAAILSNGELYTWGC 118

Query: 176 GNDARLGHH----TEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
             + +LGH     +  N+V   P+ +  LE   V+Q++ G  +     C        + G
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT---GCLTDDKKALTWG 175

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
            GL G+LGHG   D   P+LIE    L ++ +  + G  H A++   G++  +G G +G 
Sbjct: 176 LGLQGRLGHGDTQDIFTPKLIESLAGLPIKEI--SCGGHHTAILLVTGKLYMFGGGAFGK 233

Query: 291 LGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LG G+ +   +P++++  L D++   V+ G   +  V++ G VY++G G    LGH  I 
Sbjct: 234 LGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGH--IF 289

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           +G      + L+P+ +++L++    +V IS  NS     H+ AL++ G +Y +G
Sbjct: 290 NGP---EHDFLSPKRLSNLEKA--FIVDISCGNS-----HSVALSDVGDIYTWG 333



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 30/312 (9%)

Query: 124 FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 179
           +G +EYG  G+K   +   P LV+ L+++  + + + G+ ++A ++  G +  + +G   
Sbjct: 13  WGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LG     + + P   L +L+N  VVQ+A   C     A   S   +Y+ GC   GKLGH
Sbjct: 73  QLGFGNLEDCLVPRVNL-SLKN--VVQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126

Query: 240 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           G         ++ Q    + L  + V+ V+ G++H   +  D +  TWG G  G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +    PK++++L  +    ++ G + T ++   G +Y FG G    LG  +  D     
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDD----- 241

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
              VL P+L+         +  I +T     + H+ A+T+ GK+Y +G G  G+LG    
Sbjct: 242 ---VLIPRLLEG------PLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFN 290

Query: 416 NNQTERGNPERV 427
             + +  +P+R+
Sbjct: 291 GPEHDFLSPKRL 302



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 338
           V  WG   YG  G   EE    P +V  L  + +I  V+ G   +  ++  GD+  +G G
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               LG   + D         L P++  SLK     VVQ++ ++      HT A+  +G+
Sbjct: 70  GCGQLGFGNLED--------CLVPRVNLSLKN----VVQVACSDR-----HTAAILSNGE 112

Query: 399 LYAFGAGDKGQLG 411
           LY +G    G+LG
Sbjct: 113 LYTWGCSKNGKLG 125


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 157/341 (46%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + +   A G     +++  G+V+ +G++S G   +GV   K V  P+LVES
Sbjct: 271 PRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVES 328

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG+       LGH T+ +   P  + G LE 
Sbjct: 329 LAMTTVDFIACGEFHTCAVTMAGEIYT--WGDGMHYAGLLGHGTDISHWIPKRISGPLEG 386

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   Q+A+  C     A   S   +++ G G  G LGHG+R +  +P+ +E   L  L+ 
Sbjct: 387 L---QVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVE--SLAGLRT 441

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A V +            G++ TWG G    LGHG++E    P  V AL D
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID 501

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G V++ G      LG N  ADG+         P LV   K 
Sbjct: 502 FNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPYADGK--------VPCLVED-KL 551

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 552 SGESVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 587



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G   + +G LGHGT    W P+ I   L+G+++     G   T
Sbjct: 340 GEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHT 399

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++  GQ++ FG  +FG   +G +    +  P+ VESL  +  +  A G + TA +   
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGNREN--IAYPKEVESLAGLRTIAVACGVWHTAAVVEV 457

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   + 
Sbjct: 458 IVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDFNFHKIACGHSLTVG 516

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V+++G  + G+LG+    D K P L+E  +L       +A GA+H AV+  
Sbjct: 517 LTT--SGH-VFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACG 614



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 152/377 (40%), Gaps = 38/377 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  E    P+ + SL G+R I  A G   T  +
Sbjct: 395 GPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAV 454

Query: 111 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +            G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDFNFHKIACGHS 512

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  L+  G V+T       +LG+      V P  +   L    V +IA G  ++  L  
Sbjct: 513 LTVGLTTSGHVFTMGSTVYGQLGNPYADGKV-PCLVEDKLSGESVEEIACGAYHVAVLT- 570

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P L+E  +  +++ +       AA   H  V 
Sbjct: 571 --SRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSAAICLHKWVS 628

Query: 275 GQDGRVCT-------WGWGRYGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 322
           G +   C+       +   R+ C   G   C S       +   A N  K   V    +T
Sbjct: 629 GSEQSQCSSCRQAFGFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFT 688

Query: 323 TF-VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV---QI 378
               VS+  +      G   S  +    D    R + +  P  +  +KQ++ +     + 
Sbjct: 689 KLNKVSDASNTNRRNAGPRLSGENKDRLDKADLRLSKLTLPSNLDLIKQLDSKAAKQGKK 748

Query: 379 SLTNSIYWNAHTFALTE 395
           + T S+ W++   +L +
Sbjct: 749 ADTFSLVWSSQAPSLLQ 765


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 173/363 (47%), Gaps = 36/363 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTM 108
           AG  HS+A+ S G V+++G+NSSGQLG GTT     P P++ +QG+  ++   AG+  ++
Sbjct: 3   AGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQ-VQGLSEVVAVDAGSSHSL 61

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G V+A+G ++ G  + G + T   ++P  V  L  +  V A  G+     L  +G
Sbjct: 62  AVRSDGTVWAWGSNASG--QLGDETTISRSTPVQVLGLSGVLFVAA--GSSHVLALRYDG 117

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+ +   +  + G  T  N   P    G      V+ +AAG  + LA+    S    ++
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALPVQAQGLSG---VMAVAAGDNHSLAVRSDGS---AWA 171

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G+ ++   P  ++    +    V VAAG+ H+  V  DG V  WG    
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSGV----VAVAAGSAHSLAVRSDGTVWAWGANAS 227

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G      VP  VQ L+ V A  VA G + +  V  DG V+ +G  +S  LG  ++
Sbjct: 228 GQLGDGTTTDRLVPVQVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSM 285

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                     +L P  V  L      VV ++  ++     H+ A+   G ++A G+ + G
Sbjct: 286 ---------RLLVPAQVQGLSA----VVAVAAGDT-----HSLAVGSDGTVWAVGSNNNG 327

Query: 409 QLG 411
           QLG
Sbjct: 328 QLG 330



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 172/366 (46%), Gaps = 46/366 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V+++GSN+SGQLG  TT     P  +  L G+  +  AAG+   + 
Sbjct: 55  AGSSHSLAVRSDGTVWAWGSNASGQLGDETTISRSTPVQVLGLSGVLFV--AAGSSHVLA 112

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G    + +  P   + L  +  V A  G+  +  +  +G 
Sbjct: 113 LRYDGTVWAWGSNSSGQRGDGTTNNRAL--PVQAQGLSGVMAVAA--GDNHSLAVRSDGS 168

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            +  +WG++A  +LG  T  N  EP  + G      VV +AAG  + LA+    +   V+
Sbjct: 169 AW--AWGSNASGQLGEGTTSNRPEPVQVQGLSG---VVAVAAGSAHSLAVRSDGT---VW 220

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G+ TD   P  ++    +    V VAAG  H+  V  DG V  WGWGR
Sbjct: 221 AWGANASGQLGDGTTTDRLVPVQVQGLSGV----VAVAAGHHHSLAVRNDGTV--WGWGR 274

Query: 288 YGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
                LG G+     VP  VQ L+ V A  VA GD  +  V  DG V++ G   +  LG 
Sbjct: 275 NDSNQLGKGSMRLL-VPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLG- 330

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               DG        L P  V S       VV ++  +      H+ A+   G ++A+G  
Sbjct: 331 ----DGTTTYR---LVPVPVLS------GVVSVAAND-----YHSLAVRSDGTVWAWGYN 372

Query: 406 DKGQLG 411
             GQLG
Sbjct: 373 STGQLG 378



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 23/297 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V+++G+N+SGQLG GTT +   P  ++ L G+  +  AAG   ++ 
Sbjct: 205 AGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQGLSGV--VAVAAGHHHSLA 262

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G V+ +G++   +     +G+  +  P  V+ L  +  V A  G+  +  +  +G 
Sbjct: 263 VRNDGTVWGWGRNDSNQLG---KGSMRLLVPAQVQGLSAVVAVAA--GDTHSLAVGSDGT 317

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+     N+ +LG  T    + P P+L       VV +AA   + LA+    +   V++ 
Sbjct: 318 VWAVGSNNNGQLGDGTTTYRLVPVPVLSG-----VVSVAANDYHSLAVRSDGT---VWAW 369

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T    P      Q+  L  VV V AG +H+  V  DG    WG   Y
Sbjct: 370 GYNSTGQLGDGTTTTRLVP-----VQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAY 424

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G LG G+     VP  VQ L+ V A  VA+G   +  +  DG V+++G      LG+
Sbjct: 425 GQLGDGSTTYLPVPVRVQQLSGVGA--VASGSSHSLALRSDGTVWTWGYNSFGQLGN 479



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 136/314 (43%), Gaps = 37/314 (11%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           AAG+  ++ +   G V+A+G +S G+   G      V  P  V+ L  +  V A  G+  
Sbjct: 2   AAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDA--GSSH 59

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           +  +  +G V+  +WG++A  +LG  T  +   P  +LG      V+ +AAG  ++LAL 
Sbjct: 60  SLAVRSDGTVW--AWGSNASGQLGDETTISRSTPVQVLGLSG---VLFVAAGSSHVLALR 114

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 277
              +   V++ G    G+ G G+  +   P      Q   L  V+ VAAG  H+  V  D
Sbjct: 115 YDGT---VWAWGSNSSGQRGDGTTNNRALP-----VQAQGLSGVMAVAAGDNHSLAVRSD 166

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G    WG    G LG G       P  VQ L+ V A  VA G   +  V  DG V+++G 
Sbjct: 167 GSAWAWGSNASGQLGEGTTSNRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGA 224

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
             S  LG     D         L P  V  L      VV ++  +      H+ A+   G
Sbjct: 225 NASGQLGDGTTTD--------RLVPVQVQGLSG----VVAVAAGHH-----HSLAVRNDG 267

Query: 398 KLYAFGAGDKGQLG 411
            ++ +G  D  QLG
Sbjct: 268 TVWGWGRNDSNQLG 281



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 16  RQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 75
           R D  Q   GS    +R L+  +           AG  HS+AV S G V++ GSN++GQL
Sbjct: 274 RNDSNQLGKGS----MRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQL 329

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G GTT     P P+ S     ++  AA    ++ +   G V+A+G +S G+   G   T+
Sbjct: 330 GDGTTTYRLVPVPVLS----GVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTR 385

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE---PNDV 190
           LV  P  V  L  +  V A  G + +  +  +G  +   WG++A  +LG  +    P  V
Sbjct: 386 LV--PVQVSGLSEVVSVVA--GGYHSLAVRSDGSAW--DWGSNAYGQLGDGSTTYLPVPV 439

Query: 191 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
               L G      V  +A+G  + LAL    +   V++ G    G+LG+G
Sbjct: 440 RVQQLSG------VGAVASGSSHSLALRSDGT---VWTWGYNSFGQLGNG 480



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 24/214 (11%)

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +AAG  + LAL    +   V++ G    G+LG G+ T    P  + Q Q L+ + V V A
Sbjct: 1   MAAGSSHSLALRSDGT---VWAWGANSSGQLGDGTTTYSPVPVPV-QVQGLS-EVVAVDA 55

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G+ H+  V  DG V  WG    G LG       S P  VQ L     + VA G      +
Sbjct: 56  GSSHSLAVRSDGTVWAWGSNASGQLGDETTISRSTP--VQVLGLSGVLFVAAGSSHVLAL 113

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             DG V+++G   S   G     DG  N  A  +  Q ++ +  V               
Sbjct: 114 RYDGTVWAWGSNSSGQRG-----DGTTNNRALPVQAQGLSGVMAVAAG------------ 156

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           + H+ A+   G  +A+G+   GQLG    +N+ E
Sbjct: 157 DNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPE 190


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 11/308 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAG 103
           Q ++G      +TS GVV + G N SGQ GHG  +E     RPI++L+  R+  I A+ G
Sbjct: 385 QVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNG 444

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
               + I+D G  Y++G +  G+  +   GTKL   P+L+ES+K   +  AA+    +A+
Sbjct: 445 CEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL-PKLIESIKEKKMKSAAVSYHHSAL 503

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +S  G +YTF   +  +LG     +   P  L+  L    V  ++ G  +++   C  SG
Sbjct: 504 VSVSGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKALLGHHVSMVSCGLYHMVL--CTISG 560

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V++ G    G+LG G     K P    Q  L N     VA G +HA  +   G   ++
Sbjct: 561 -EVFTCGKNDHGQLGLGHNKQVKVP---TQVVLPNELVCFVACGYYHATAITSTGLTYSF 616

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LG G++  +++P  +   ++ + +H A G Y T ++S+ G V+ FG      L
Sbjct: 617 GRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQL 676

Query: 344 GHNAIADG 351
           G+    D 
Sbjct: 677 GNRGNTDS 684



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 17/310 (5%)

Query: 47   QAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 104
            Q+IAG    + V  K G V++ G N SGQ G G  +E    P PI +L GI I   AA  
Sbjct: 3169 QSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASN 3228

Query: 105  G--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFT 161
            G    + IS  G VY++G +  G+   G   +K  T P+++ESL+   F+  AA+    +
Sbjct: 3229 GCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHT-PRVIESLREKYFITFAAVSYHHS 3287

Query: 162  AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            AV+S  G + TF   +  +LG     +   P  L+ TL +  V ++A G  + +A+    
Sbjct: 3288 AVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQ-LVETLSSQKVGRVACGLYHTVAIV--- 3343

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNL--QPVVVAAGAWHAAVV 274
                VYS G    G+LG     + K P L++     +  +L+   + V V  G +H   +
Sbjct: 3344 DDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTI 3403

Query: 275  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             + G+V TWG   YG LG G++E +S+ + V      +    + G Y T ++  +G    
Sbjct: 3404 LECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMV 3463

Query: 335  FGCGESASLG 344
            FG      LG
Sbjct: 3464 FGRNNKGQLG 3473



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 15/283 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H IA+T  G+ YS+G N  GQLGH     + + P+ I S++  ++  AA     + L
Sbjct: 444 GCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSAL 503

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S +G++Y FG +  G+   G+  T+  ++PQLV++L    V   + G +   + +  G 
Sbjct: 504 VSVSGELYTFGMNDCGQ--LGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGE 561

Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V+T    +  +LG  H +   V   P    L N  V  +A GY +  A A   +G+  YS
Sbjct: 562 VFTCGKNDHGQLGLGHNKQVKV---PTQVVLPNELVCFVACGYYH--ATAITSTGL-TYS 615

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG GS+  +  P  I      N + V  A G +H  ++   G+V  +G    
Sbjct: 616 FGRNDYGQLGIGSKIHQNIP--IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNK 673

Query: 289 GCLGH-GN-EECESVP-KVVQALNDVKAIHVATGDYTTFVVSE 328
           G LG+ GN +    VP KV    N  + +H+A G YTT ++ E
Sbjct: 674 GQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVE 716



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 141/301 (46%), Gaps = 15/301 (4%)

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            ++++ G++++GE   G              S K+I  +  A GN    VL ++G V+T  
Sbjct: 3134 EIFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSI--AGGNEVLVVLMKDGAVFTCG 3191

Query: 175  WGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                 + G  + +   + P P+   L  IP+  +AA       LA    G AVYS G   
Sbjct: 3192 LNKSGQCGIGNFDERLIVPSPI-PALSGIPITMVAASNGCEHMLAISHDG-AVYSWGYND 3249

Query: 234  GGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCL 291
             G+LG G+   + H PR+IE  +      +  AA ++H +AVV  +G + T+G    G L
Sbjct: 3250 RGQLGLGTTVSKSHTPRVIESLREKYF--ITFAAVSYHHSAVVSNNGDLLTFGMNDSGQL 3307

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  + + +  P++V+ L+  K   VA G Y T  + +DGDVYSFG  E   LG +   + 
Sbjct: 3308 GLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNT 3367

Query: 352  QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +      +        L  VN + VQ+      Y+  HT  + E GK+  +G  D GQLG
Sbjct: 3368 KVPMLVKIPPAPRTPMLDAVN-KAVQVYCG---YY--HTVTILECGKVVTWGRNDYGQLG 3421

Query: 412  I 412
            I
Sbjct: 3422 I 3422



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 20/197 (10%)

Query: 225  AVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            AV++ G    G+ G G+  DE+   P  I     + +  V  + G  H   +  DG V +
Sbjct: 3186 AVFTCGLNKSGQCGIGN-FDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYS 3244

Query: 283  WGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGES 340
            WG+   G LG G    +S  P+V+++L +   I  A   Y  + VVS +GD+ +FG  +S
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              LG     D   ++H    TPQLV +L   +++V +++    +Y   HT A+ + G +Y
Sbjct: 3305 GQLG----LDHTQHQH----TPQLVETLS--SQKVGRVAC--GLY---HTVAIVDDGDVY 3349

Query: 401  AFGAGDKGQLGIELVNN 417
            +FG  + GQLG+    N
Sbjct: 3350 SFGKNEYGQLGLSHTQN 3366



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 24/354 (6%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           S G +YS G NS G+LG G   E  +   +       I Q  +G     +++  G V   
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTC 405

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
           G +  G+  +G    + V   + +++L++  +  + A+ G      ++  G  Y++ + +
Sbjct: 406 GLNKSGQCGHG-NFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYND 464

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             +LGH      +    L+ +++   +   A  Y +   ++   SG  +Y+ G    G+L
Sbjct: 465 RGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSV--SG-ELYTFGMNDCGQL 521

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G      +  P+L++   LL     +V+ G +H  +    G V T G   +G LG G+ +
Sbjct: 522 GLDHTQHQSTPQLVKA--LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNK 579

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
              VP  V   N++    VA G Y    ++  G  YSFG  +   LG  +        H 
Sbjct: 580 QVKVPTQVVLPNEL-VCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGS------KIHQ 632

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           N+     ++S    N R+V  +     Y   HT  +++SG+++ FG  +KGQLG
Sbjct: 633 NIPIALTISS----NTRMVHAAC--GCY---HTLLMSDSGQVFVFGRNNKGQLG 677



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 34/306 (11%)

Query: 114 GQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           G++Y+ G++S+GE   G  ++  +L + P          + Q   GN   A+L+ +G V 
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWD----HIRQVVSGNEILAILTSDGVVL 403

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           T       + GH      V     +  L +  V  I A       +A   +G+A YS G 
Sbjct: 404 TCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLA-YSWGY 462

Query: 232 GLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LGH +  T    P+LIE  +   ++   V+    H+A+V   G + T+G    G 
Sbjct: 463 NDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYH--HSALVSVSGELYTFGMNDCGQ 520

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS----LGHN 346
           LG  + + +S P++V+AL       V+ G Y   + +  G+V  F CG++      LGHN
Sbjct: 521 LGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEV--FTCGKNDHGQLGLGHN 578

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                Q      V+ P         NE V  ++     Y+  H  A+T +G  Y+FG  D
Sbjct: 579 K----QVKVPTQVVLP---------NELVCFVACG---YY--HATAITSTGLTYSFGRND 620

Query: 407 KGQLGI 412
            GQLGI
Sbjct: 621 YGQLGI 626



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 39/231 (16%)

Query: 205 VQIAAGYCYLLALACQP------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           V I+     L AL  QP      S   +YS G    G+LG G          IE+ QL +
Sbjct: 323 VNISPSLSKLSALREQPMYGKCESFGELYSCGQNSYGELGLGDD--------IERHQLTS 374

Query: 259 LQPVV-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND 310
           + P+        V +G    A++  DG V T G  + G  GHGN +E   + + +QAL  
Sbjct: 375 V-PLCGWDHIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRS 433

Query: 311 --VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
             VK I+ + G      +++ G  YS+G  +   LGH  +          +  P+L+ S+
Sbjct: 434 HRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVG-------TKLYLPKLIESI 486

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           K+   +   +S         H+  ++ SG+LY FG  D GQLG++   +Q+
Sbjct: 487 KEKKMKSAAVSY-------HHSALVSVSGELYTFGMNDCGQLGLDHTQHQS 530



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 10/253 (3%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           KL L  L+  E+   ++   A     HS  V+  G +Y+FG N  GQLG   T+ +  P+
Sbjct: 476 KLYLPKLI--ESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQ 533

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            +++L G  +   + G    +L + +G+V+  GK+  G  + G+   K V  P  V  L 
Sbjct: 534 LVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG--QLGLGHNKQVKVPTQV-VLP 590

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           N  V   A G +    ++  G  Y+F   +  +LG  ++ +   P  L  +  N  +V  
Sbjct: 591 NELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTIS-SNTRMVHA 649

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
           A G CY   L    SG  V+  G    G+LG+   TD   P  ++     N++  + +AA
Sbjct: 650 ACG-CY-HTLLMSDSGQ-VFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAA 706

Query: 267 GAWHAAVVGQDGR 279
           G +  +++ +  R
Sbjct: 707 GFYTTSLIVERKR 719



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 23/203 (11%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            HS  V++ G + +FG N SGQLG   T+ +  P+ + +L   ++ + A G   T+ I D 
Sbjct: 3286 HSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDD 3345

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------SLKNI-FVVQAAIGNFFTAVL 164
            G VY+FGK+ +G  + G+  T+    P LV+         L  +   VQ   G + T  +
Sbjct: 3346 GDVYSFGKNEYG--QLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTI 3403

Query: 165  SREGRVYTFSWGNDARLG----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
               G+V T+   +  +LG     H       P PL         V+ A+  CY   L   
Sbjct: 3404 LECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLV 3457

Query: 221  PSGMAVYSVGCGLGGKLGHGSRT 243
                 V+  G    G+LG  SR+
Sbjct: 3458 NGRPMVF--GRNNKGQLGVASRS 3478



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 22/186 (11%)

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGN 295
            LGH + T++     +E+    + + +   AG     VV  +DG V T G  + G  G GN
Sbjct: 3148 LGHCNPTNK-----LERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGN 3202

Query: 296  -EECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
             +E   VP  + AL+ +    VA   G      +S DG VYS+G  +   LG        
Sbjct: 3203 FDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLG-------L 3255

Query: 353  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            G   +   TP+++ SL++      +  +T +     H+  ++ +G L  FG  D GQLG+
Sbjct: 3256 GTTVSKSHTPRVIESLRE------KYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGL 3309

Query: 413  ELVNNQ 418
            +   +Q
Sbjct: 3310 DHTQHQ 3315


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 149/292 (51%), Gaps = 26/292 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AVT  G +Y++G+ +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 369 GEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 428

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  +FG   +G +  K V+ P+ VESLK +  V+AA G + TA +   
Sbjct: 429 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEV 486

Query: 165 -------SREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                  S    V  F+WG+    RLGH  +   + P  +     N  V Q+A G+   +
Sbjct: 487 MVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHN--VCQVACGHSLTV 544

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   VY++G  + G+LG+  + D K P L+E  +L       +A GA+H AV+ 
Sbjct: 545 ALT---TSGRVYTMGSPVYGQLGN-PQADGKLPILVEG-KLSESFVEEIACGAYHVAVLT 599

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
               V TWG G  G LGHG+ +  + P +V+AL D     +A G  TTF  +
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACG--TTFTAA 649



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 150/343 (43%), Gaps = 43/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+V+++G++S G   +GV     V  P+L+E+
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIEA 357

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L N  +   A G + +  ++  G +YT  WGN       LGH  + +   P  + G LE 
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYT--WGNGTYNYGLLGHGNQVSHWVPKRVNGPLEG 415

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 416 IHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 470

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +               + TWG G  G LGH ++E + VP  V AL 
Sbjct: 471 VRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV-ALA 529

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G      LG N  ADG+         P LV    
Sbjct: 530 EHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLG-NPQADGK--------LPILV---- 576

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 577 ---EGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 113/251 (45%), Gaps = 28/251 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 424 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAV 483

Query: 111 SDAG------------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +               ++ +G    G   +  +  KLV  P  V +L    V Q A G+
Sbjct: 484 VEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV--PTCV-ALAEHNVCQVACGH 540

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLA 216
             T  L+  GRVYT       +LG+   P      P+L  G L    V +IA G  ++  
Sbjct: 541 SLTVALTTSGRVYTMGSPVYGQLGN---PQADGKLPILVEGKLSESFVEEIACGAYHVAV 597

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHA 271
           L    S   VY+ G G  G+LGHG   D   P L+E  +  +++ +       AA   H 
Sbjct: 598 LT---SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAICLHK 654

Query: 272 AVVGQDGRVCT 282
            V G D  +C+
Sbjct: 655 WVSGVDQSMCS 665



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 20/185 (10%)

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           + VG  LG K+      D   P+ +E   +L++Q +  A G  HAA+V + G V +WG  
Sbjct: 285 HRVGSCLGAKM------DSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEVFSWGEE 336

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LGHG +     PK+++AL++     VA G+Y +  V+  GD+Y++G G      +N
Sbjct: 337 SGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGT-----YN 391

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
               G GN+ ++ +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G 
Sbjct: 392 YGLLGHGNQVSHWVPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGT 444

Query: 407 KGQLG 411
            G LG
Sbjct: 445 FGALG 449



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS   GQLG+   + +        L    + + A GA  
Sbjct: 535 QVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYH 594

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK + G   +G   T    +P LVE+LK+  V   A G  FTA +
Sbjct: 595 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 177/376 (47%), Gaps = 47/376 (12%)

Query: 58  VTSKGVVYSFG---SNSSGQLGHGT----TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + S G VY +G   +++    G+GT    T +   P+P+ S   + + Q A+G     L+
Sbjct: 220 IESLGDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G+V+ +G++S G   +G+   K    PQLVE L    V   A G   T  +S    +
Sbjct: 280 TRQGEVFTWGEESGGRLGHGID--KDFGRPQLVEFLAVTNVESVACGENHTCAVSISDEL 337

Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             FSWG    N   LGH T+ +   P  + G LE + V+ IA G  +  ALA   S   +
Sbjct: 338 --FSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACG-TWHSALAT--SNGKL 392

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
           ++ G G  G LGHG+R    +P+   + QLL+ L+ + VA G WH A    V  Q G   
Sbjct: 393 FTFGDGTFGVLGHGNRESVAYPK---EVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNV 449

Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
              ++ TWG G    LGHGN+E    P  V  L +     +A G   T  ++  G +++ 
Sbjct: 450 SSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTM 509

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G  E   LG N+++DG+         P LV     V E V +IS         H  ALT 
Sbjct: 510 GGTEFGQLG-NSLSDGK--------IPILVQD-ALVGEFVEEISCGAH-----HVAALTS 554

Query: 396 SGKLYAFGAGDKGQLG 411
             +LY +G G  G+LG
Sbjct: 555 RSELYTWGKGANGRLG 570



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 155/326 (47%), Gaps = 45/326 (13%)

Query: 110 ISDAGQVYAFGK---DSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           I   G VY +G+   D+      G Q   T  V  P+ +ES   + V Q A G    A++
Sbjct: 220 IESLGDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +R+G V+T  WG ++  RLGH  + +   P  L+  L    V  +A G  +  A++    
Sbjct: 280 TRQGEVFT--WGEESGGRLGHGIDKDFGRPQ-LVEFLAVTNVESVACGENHTCAVSISDE 336

Query: 223 ----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
               G   Y+VG      LGHG+      P+ I    L  LQ + +A G WH+A+   +G
Sbjct: 337 LFSWGDGKYNVGL-----LGHGTDVSHWVPKRING-PLEGLQVISIACGTWHSALATSNG 390

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------- 328
           ++ T+G G +G LGHGN E  + PK VQ L+ +K I VA G + T  + E          
Sbjct: 391 KLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNVS 450

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
              ++++G G+   LGH       GN+    L P  V++L + N    QI+  +++    
Sbjct: 451 SRKLFTWGDGDKYRLGH-------GNKET-YLQPTCVSTLIEYN--FHQIACGHTM---- 496

Query: 389 HTFALTESGKLYAFGAGDKGQLGIEL 414
            T ALT SG L+  G  + GQLG  L
Sbjct: 497 -TIALTTSGHLFTMGGTEFGQLGNSL 521



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 22/296 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N +++A G  H+ AV+    ++S+G    + G LGHGT    W P+ I   L+G+++I  
Sbjct: 317 NVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISI 376

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   + L +  G+++ FG  +FG   +G + +  V  P+ V+ L  +  +  A G + 
Sbjct: 377 ACGTWHSALATSNGKLFTFGDGTFGVLGHGNRES--VAYPKEVQLLSGLKTITVACGVWH 434

Query: 161 TAVLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           TA +              +++T+  G+  RLGH  +   ++P   + TL      QIA G
Sbjct: 435 TAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPT-CVSTLIEYNFHQIACG 493

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           +   +AL    SG  ++++G    G+LG+ S +D K P L+ Q  L+      ++ GA H
Sbjct: 494 HTMTIALTT--SGH-LFTMGGTEFGQLGN-SLSDGKIPILV-QDALVGEFVEEISCGAHH 548

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            A +     + TWG G  G LGHG+ +    P +V+AL +    +++ G   T  +
Sbjct: 549 VAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFTSCI 604



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 25/335 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  +G  H   VT +G V+++G  S G+LGHG  ++  RP+ +  L    +   A G   
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENH 327

Query: 107 TMLISDAGQVYAF--GKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAV 163
           T  +S + +++++  GK + G   +G   +  V  P+ +   L+ + V+  A G + +A+
Sbjct: 328 TCAVSISDELFSWGDGKYNVGLLGHGTDVSHWV--PKRINGPLEGLQVISIACGTWHSAL 385

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA----- 218
            +  G+++TF  G    LGH    +   P   +  L  +  + +A G  +  A+      
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGNRESVAYPKE-VQLLSGLKTITVACGVWHTAAIVEVTFQ 444

Query: 219 --CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
                S   +++ G G   +LGHG++     P  +      N     +A G      +  
Sbjct: 445 SGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH--QIACGHTMTIALTT 502

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            G + T G   +G LG+   + + +P +VQ AL       ++ G +    ++   ++Y++
Sbjct: 503 SGHLFTMGGTEFGQLGNSLSDGK-IPILVQDALVGEFVEEISCGAHHVAALTSRSELYTW 561

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           G G +  LGH  I D +        +P LV +LK+
Sbjct: 562 GKGANGRLGHGDIDDRK--------SPTLVEALKE 588


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 146/298 (48%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 26  GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK--KPDQVGALDAQTIVAVSCGEAHTLAL 83

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+++G  + G+    V     +  P+ ++SL +I +VQ A G+  +  LS+E  +
Sbjct: 84  NDKGQVFSWGHAAHGQIGLSV-AEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDI 142

Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           Y  SWG +   +LG  +E         + +L  IP   IAAG  +  AL    SG A++ 
Sbjct: 143 Y--SWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTM--SG-AIFG 197

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG    TD   P L++    L  Q ++ +  G  H A + ++G V T+G G 
Sbjct: 198 WGRNKFGQLGLNDETDRSAPALLKS---LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T   V   G +YSFG G +  LG
Sbjct: 255 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++ +  +YS+G N  GQLG G+  ++E  PR I+SL GI     AAG G
Sbjct: 125 QVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGG 184

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G ++ +G++ FG+   G+      ++P L++SL++  ++    G   TA L+
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQL--GLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALT 242

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  ++V P  +   + +I V QIA G  + LA    PS   
Sbjct: 243 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 299

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 300 IYSFGLGGNGQLGTGSTSNRKSP 322



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 161/346 (46%), Gaps = 34/346 (9%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR         +     G+  T+ + D G VY  G +  G+  +     K    P  V +
Sbjct: 9   PRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK----PDQVGA 64

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 203
           L    +V  + G   T  L+ +G+V  FSWG+ A  ++G     + +     + +L +I 
Sbjct: 65  LDAQTIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQ 122

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPV 262
           +VQ+A G+ + LAL+ +     +YS G    G+LG GS    E  PR I+   L  +   
Sbjct: 123 IVQVACGHHHSLALSKESD---IYSWGQNQYGQLGLGSEIKKESAPRHIKS--LAGIPFA 177

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +AAG  H+  +   G +  WG  ++G LG  +E   S P ++++L   K IH+  G+  
Sbjct: 178 HIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDH 237

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           T  ++++G V++FG G    LGHN+      N   N   P+ V  L  +   V QI+   
Sbjct: 238 TAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGSIVTQIACGR 287

Query: 383 SIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 423
                 HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 288 Q-----HTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 328



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG V+S+G  + GQ+G    E+  R PR I+SL  I+I+Q A G   ++ 
Sbjct: 76  GEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLA 135

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S    +Y++G++ +G+   G +  K  ++P+ ++SL  I     A G   +  L+  G 
Sbjct: 136 LSKESDIYSWGQNQYGQLGLGSE-IKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGA 194

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P  LL +L +  ++ I  G  +  AL  +     V+
Sbjct: 195 I--FGWGRNKFGQLGLNDETDRSAP-ALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 248

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S   E +PR +  F+L+      +A G  H  A V   GR+ ++G G
Sbjct: 249 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 306

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 307 GNGQLGTGSTSNRKSPFTVK 326



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 34/298 (11%)

Query: 135 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPNDVE 191
           ++V  P+  +   N  V     G+  T  +  +G VYT    +  +LGH     +P+ V 
Sbjct: 4   EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKPDQV- 62

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRL 250
                G L+   +V ++ G  + LAL        V+S G    G++G     D  + PR 
Sbjct: 63  -----GALDAQTIVAVSCGEAHTLALN---DKGQVFSWGHAAHGQIGLSVAEDYIRVPRN 114

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALN 309
           I+   L ++Q V VA G  H+  + ++  + +WG  +YG LG G+E + ES P+ +++L 
Sbjct: 115 IK--SLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLA 172

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            +   H+A G   +F ++  G ++ +G  +   LG N   D           P L+ SL+
Sbjct: 173 GIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSA--------PALLKSLR 224

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             +++++ I          HT ALT+ G ++ FGAG  GQLG    N++    NP +V
Sbjct: 225 --SQKIIHICCGED-----HTAALTKEGGVFTFGAGGYGQLGHNSTNHEV---NPRKV 272



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 3/149 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS A+T  G ++ +G N  GQLG     +   P  ++SL+  +II    G   T  
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAA 240

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
           ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A +   G
Sbjct: 241 LTKEGGVFTFGAGGYGQL--GHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 298

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           R+Y+F  G + +LG  +  N   P  + G
Sbjct: 299 RIYSFGLGGNGQLGTGSTSNRKSPFTVKG 327


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 145/307 (47%), Gaps = 18/307 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 111
           HSIA+T+KG   ++G+    +LGHG++ +E+ PR I   SL+G R+   A G G T+ + 
Sbjct: 221 HSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALI 279

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           ++G++YA+G  S G    G    +   +     S+  +       G   +  LS +GR Y
Sbjct: 280 ESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAY 339

Query: 172 TFSWGNDARLGH-HTEPN----DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            +   N  + GH HT       ++E        E    V  AAG  +   L C  SG  V
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGG-WEHTLFCTASGR-V 397

Query: 227 YSVGCGLGGK--------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           YS GCG            LGHG       P  ++     + + V VA G  H+  V  +G
Sbjct: 398 YSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANG 457

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           RV TWG G  G LGHG+EE   +P +V+ ++  K      G   T  ++ D ++++ G G
Sbjct: 458 RVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCGQG 517

Query: 339 ESASLGH 345
           +S  LGH
Sbjct: 518 DSGRLGH 524



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 33/278 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR----SLQGIRIIQAAAGAGR 106
           G GH++A+   G +Y++G+ S+G+LG G T +  R  P R    S+  +R      GA  
Sbjct: 271 GLGHTLALIESGELYAWGNGSNGRLGLGDTND--RSSPTRSNGASIAPVRFRHIFCGASH 328

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-------FVVQAAIGNF 159
           ++ +S  G+ YA+GK++ G+  +G    +     Q +ES ++        FVV AA G  
Sbjct: 329 SLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTI--QEIESFRDTEEGEEEEFVVYAAGGWE 386

Query: 160 FTAVLSREGRVYTFSWG-NDAR-------LGHHTEPNDVEP---HPLLGTLENIPVVQIA 208
            T   +  GRVY+   G  D+R       LGH      ++P     L  T E   VV++A
Sbjct: 387 HTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEE--VVKVA 444

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G+ + LA+        VY+ G G  GKLGHG       P L+       ++     AG 
Sbjct: 445 CGWDHSLAVTANGR---VYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKD--AKAGC 499

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            H   +  D  + T G G  G LGHG+ +    P  ++
Sbjct: 500 EHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIE 537



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 142/340 (41%), Gaps = 49/340 (14%)

Query: 114 GQVYAFGKDSFGEAEYGV---------QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           G + +FGK   G+  +G            T+    P ++ + +++   +    +  +  +
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G    +  G+  RLGH +   +  P  +        V  +A G  + LAL    SG 
Sbjct: 226 TAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALI--ESG- 282

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +Y+ G G  G+LG G   D   P       +  ++   +  GA H+  +  DGR   WG
Sbjct: 283 ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWG 342

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVK-------AIHVATGDYTTFVVSEDGDVYSFGC 337
               G  GHG+   +   + +++  D +        ++ A G   T   +  G VYS GC
Sbjct: 343 KNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGC 402

Query: 338 GESAS--------LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G   S        LGH     G  +R    L P  V +L   +E VV+++      W+ H
Sbjct: 403 GYKDSRRAGIPPVLGH-----GDCDRR---LKPTSVQALDDTHEEVVKVACG----WD-H 449

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           + A+T +G++Y +G+G  G+LG          G+ E  DI
Sbjct: 450 SLAVTANGRVYTWGSGANGKLG---------HGDEESFDI 480



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 165/399 (41%), Gaps = 57/399 (14%)

Query: 62  GVVYSFGSNSSGQLGHG-----------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G + SFG    G+LGHG            TE +  P  I + + +   +  + +  ++ I
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
           +  G+  A+G        +G    +   +P+ +E  SLK   V   A G   T  L   G
Sbjct: 226 TAKGEAMAWGNGDKYRLGHGSSSKEY--TPRTIEFLSLKG-RVRDLACGLGHTLALIESG 282

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            +Y +  G++ RLG     +   P    G ++  +    I  G  + L L+    G A Y
Sbjct: 283 ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWD--GRA-Y 339

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ----LLNLQPVVVAAGAW-HAAVVGQDGRVCT 282
           + G    G+ GHG   D+   + IE F+        + VV AAG W H       GRV +
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYS 399

Query: 283 WGWG-----RYG---CLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDV 332
            G G     R G    LGHG+ +    P  VQAL+D   + + VA G   +  V+ +G V
Sbjct: 400 CGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRV 459

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHT 390
           Y++G G +  LGH            +   P LV  +  K+V +               HT
Sbjct: 460 YTWGSGANGKLGHGD--------EESFDIPTLVRCMDGKKVKDAKAGCE---------HT 502

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
             LT   +L+  G GD G+LG     +   R  P ++++
Sbjct: 503 VFLTYDHELWTCGQGDSGRLG---HGDSQTRKRPTKIEL 538



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 19/221 (8%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-------IIQAA 101
             G  HS+ ++  G  Y++G N+ GQ GHG T ++W  + I S +          ++ AA
Sbjct: 323 FCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAA 382

Query: 102 AGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF--VVQ 153
            G   T+  + +G+VY+ G   KDS       V G         P  V++L +    VV+
Sbjct: 383 GGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVK 442

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G   +  ++  GRVYT+  G + +LGH  E +   P  L+  ++   V    AG  +
Sbjct: 443 VACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIP-TLVRCMDGKKVKDAKAGCEH 501

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            + L        +++ G G  G+LGHG     K P  IE F
Sbjct: 502 TVFLTYD---HELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 32/213 (15%)

Query: 220 QPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAG---------- 267
           QP G  + S G G  GKLGHG  S    +     E      + P ++AA           
Sbjct: 163 QPCGY-LMSFGKGDHGKLGHGQCSHVSCQEGNCTEN----KMVPTMIAATRDVLFRKIDS 217

Query: 268 -AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFV 325
            + H+  +   G    WG G    LGHG+   E  P+ ++ L+   +   +A G   T  
Sbjct: 218 LSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLA 277

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           + E G++Y++G G +  LG     D      +N                +  +   +   
Sbjct: 278 LIESGELYAWGNGSNGRLGLGDTNDRSSPTRSN-------------GASIAPVRFRHIFC 324

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             +H+  L+  G+ YA+G  ++GQ G    N+Q
Sbjct: 325 GASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQ 357


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 150/301 (49%), Gaps = 13/301 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           + + G  HS+ +   G VY+ GSNS GQLGH   +    P  + +L   +I   + G   
Sbjct: 37  EIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHN--KPGITPEFVGALDTQKITLVSCGQAH 94

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +++ GQV+A+G    G+   G   T  V  P+L++ L +  + Q   GN     LS+
Sbjct: 95  SLAVNEQGQVFAWGAGEEGQLGLGTTETA-VRIPRLIKRLCDHRIAQVMCGNQHCIALSK 153

Query: 167 EGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +G+++T+      +LG    EP+ + P P L +L  IP+ +I AG  +  AL+   SG A
Sbjct: 154 DGQLFTWGQNTSGQLGLGKGEPSKLFPQP-LKSLAGIPLAKITAGGDHSFALSL--SG-A 209

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           V+  G    G+LG     D   P  I   + L  Q VV ++ G  H A + +DG + T+G
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHI---KFLRSQKVVHISCGEEHTAALTKDGGLFTFG 266

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASL 343
            G +G LGHG+   E +P+ V  L   +   +  G + T   +   G VY+FGC     L
Sbjct: 267 DGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQL 326

Query: 344 G 344
           G
Sbjct: 327 G 327



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 21/275 (7%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 99
           C    +Q + G  H IA++  G ++++G N+SGQLG G  E  +  P+P++SL GI + +
Sbjct: 134 CDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAK 193

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             AG   +  +S +G V+ +GK+  G  + G+   +    P  ++ L++  VV  + G  
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNKAG--QLGLNDIQDRAVPCHIKFLRSQKVVHISCGEE 251

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            TA L+++G ++TF  G+  +LGH +  N++ P  +L  L    V QI  G  + LA A 
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL-ELMGTEVSQITCGRHHTLAFA- 309

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
            PS   VY+ GC   G+LG G  + +K P  ++   L         +G+ H  V      
Sbjct: 310 -PSSGGVYAFGCNSHGQLGTGVLSADKSPYPLKTSFL---------SGSIHGTVTK---- 355

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
             T G G +  L + N++    P+  + +N   AI
Sbjct: 356 -ITCG-GDHSFLLYSNDQNSEYPEDFRVINISNAI 388



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 27/348 (7%)

Query: 67  FGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           +G    GQLG G      + PR      G  + +   G   ++ +   G VY  G +S G
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +  +   G     +P+ V +L    +   + G   +  ++ +G+V+ +  G + +LG  T
Sbjct: 64  QLGHNKPGI----TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGT 119

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
               V    L+  L +  + Q+  G  + +AL+       +++ G    G+LG G     
Sbjct: 120 TETAVRIPRLIKRLCDHRIAQVMCGNQHCIALS---KDGQLFTWGQNTSGQLGLGKGEPS 176

Query: 246 K-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           K  P+ ++    + L  +   AG  H+  +   G V  WG  + G LG  + +  +VP  
Sbjct: 177 KLFPQPLKSLAGIPLAKI--TAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCH 234

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           ++ L   K +H++ G+  T  +++DG +++FG G    LGH +         AN L P+ 
Sbjct: 235 IKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGST--------ANELLPRR 286

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
           V  L+ +   V QI+         HT A    SG +YAFG    GQLG
Sbjct: 287 V--LELMGTEVSQITCGRH-----HTLAFAPSSGGVYAFGCNSHGQLG 327



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 25/292 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  +G V+++G+   GQLG GTTE   R PR I+ L   RI Q   G    + 
Sbjct: 91  GQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIA 150

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S  GQ++ +G+++ G+   G +G      PQ ++SL  I + +   G   +  LS  G 
Sbjct: 151 LSKDGQLFTWGQNTSGQLGLG-KGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGA 209

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGM 224
           V  F WG +   +LG     ND++   +   +  L +  VV I+ G  +  AL       
Sbjct: 210 V--FGWGKNKAGQLGL----NDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALT---KDG 260

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
            +++ G G  G+LGHGS  +E  PR +   +L+  +   +  G  H  A     G V  +
Sbjct: 261 GLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGVYAF 318

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIH------VATGDYTTFVVSED 329
           G   +G LG G    +  P  ++      +IH         GD++  + S D
Sbjct: 319 GCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSND 370



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 26/203 (12%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-LLNLQPV-VVAAGAWHAAVVGQDGRVCT 282
           +VY+ G    G+LGH        P +  +F   L+ Q + +V+ G  H+  V + G+V  
Sbjct: 53  SVYTCGSNSCGQLGHNK------PGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFA 106

Query: 283 WGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           WG G  G LG G  E    +P++++ L D +   V  G+     +S+DG ++++G   S 
Sbjct: 107 WGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LG   +  G+ ++    L PQ + SL         I L        H+FAL+ SG ++ 
Sbjct: 167 QLG---LGKGEPSK----LFPQPLKSL-------AGIPLAKITAGGDHSFALSLSGAVFG 212

Query: 402 FGAGDKGQLGIELVNNQTERGNP 424
           +G    GQLG+   N+  +R  P
Sbjct: 213 WGKNKAGQLGL---NDIQDRAVP 232



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 19/179 (10%)

Query: 235 GKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           G+LG G  R     PR    F    L+ +V   G  H+  +  DG V T G    G LGH
Sbjct: 10  GQLGIGVERNPMFEPRNCNVFTGRGLKEIV--CGGQHSVFLLHDGSVYTCGSNSCGQLGH 67

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
                   P+ V AL+  K   V+ G   +  V+E G V+++G GE   LG        G
Sbjct: 68  NKPGI--TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLG-------LG 118

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
                V  P+L+  L   + R+ Q+     +  N H  AL++ G+L+ +G    GQLG+
Sbjct: 119 TTETAVRIPRLIKRL--CDHRIAQV-----MCGNQHCIALSKDGQLFTWGQNTSGQLGL 170



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 18/131 (13%)

Query: 283 WGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           WG  + G LG G E      P+            +  G   +  +  DG VY+ G     
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LGHN             +TP+ V +L    +++  +S        AH+ A+ E G+++A
Sbjct: 64  QLGHNKPG----------ITPEFVGALD--TQKITLVSCGQ-----AHSLAVNEQGQVFA 106

Query: 402 FGAGDKGQLGI 412
           +GAG++GQLG+
Sbjct: 107 WGAGEEGQLGL 117


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 177/349 (50%), Gaps = 33/349 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           V+ +G ++ GQL  G +EE     P+ +  LQ + I + + G   T++++  G++Y+ G 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 122 DSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           + +GE  +    ++ V+    +LV SL ++ V+QAA G+ F+ V++  G V  FSWG + 
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEV--FSWGRND 121

Query: 180 R--LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
           +  LG      + E  P L+ +L    VVQI  G  + LAL        ++S GC   G+
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALT---DDGRLFSWGCNKYGQ 178

Query: 237 LGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           LG GS  +    P   +Q   L   P+  +A+G  H+ ++     V  WG   +G LG  
Sbjct: 179 LGLGSSHSFHDTP---QQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLN 235

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           +E  +S P + ++L + K ++++ G+  T  ++++G V+SFG G    LGHN+       
Sbjct: 236 DEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNST------ 289

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAF 402
              N + P+ V  L  +   + Q++         HT A +  SGK+YAF
Sbjct: 290 --QNEILPKRVMEL--MGSVISQVACGRR-----HTVAFSPSSGKMYAF 329



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 34/302 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP----------IRSLQGIRIIQA 100
           G  H++ VT  G +YS GSN  G+LGH       +PR           + SL  +++IQA
Sbjct: 45  GEKHTLIVTKDGKLYSCGSNEYGELGHS------KPRSRAVSIDVVELVSSLSSMQVIQA 98

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G+  +++I+ AG+V+++G++  G+   G    +    P+L++SL    VVQ   G   
Sbjct: 99  AGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANH 158

Query: 161 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYL 214
              L+ +GR+  FSWG +      LG     +D  P  ++  L  IP+ QIA+G  + ++
Sbjct: 159 CLALTDDGRL--FSWGCNKYGQLGLGSSHSFHDT-PQQIV-CLRGIPIAQIASGGNHSFI 214

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           L  +      AV+  G    G+LG     D+ HP L +   L N + + ++ G  H   +
Sbjct: 215 LTWS-----RAVFGWGKNSFGQLGLNDEYDKSHPTLCK--SLRNQKVMYISCGEDHTVAL 267

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVY 333
            ++G V ++G G +G LGH + + E +PK V  L       VA G   T   S   G +Y
Sbjct: 268 TKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMY 327

Query: 334 SF 335
           +F
Sbjct: 328 AF 329



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 31/319 (9%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+ +G+ + G+   G      + SP+ V  L+ + + + + G   T +++++G++Y+   
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 176 GNDARLGHHTEPND----VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
                LGH ++P      ++   L+ +L ++ V+Q A G  + L +    +   V+S G 
Sbjct: 64  NEYGELGH-SKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVIT---TAGEVFSWGR 119

Query: 232 GLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
              G+LG G  S+ +E+ P+L++   +  +  V +  GA H   +  DGR+ +WG  +YG
Sbjct: 120 NDKGQLGRGKLSKEEERKPKLMKSLAVCTV--VQITCGANHCLALTDDGRLFSWGCNKYG 177

Query: 290 CLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            LG G+       P+ +  L  +    +A+G   +F+++    V+ +G      LG N  
Sbjct: 178 QLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLN-- 235

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D     H     P L  SL+  N++V+ IS         HT ALT+ G +++FGAG  G
Sbjct: 236 -DEYDKSH-----PTLCKSLR--NQKVMYISCGED-----HTVALTKEGGVFSFGAGGFG 282

Query: 409 QLGIELVNNQTERGNPERV 427
           QLG     N+     P+RV
Sbjct: 283 QLGHNSTQNEIL---PKRV 298



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 104
           QA  G   S+ +T+ G V+S+G N  GQLG G  + EEE +P+ ++SL    ++Q   GA
Sbjct: 97  QAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGA 156

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++D G+++++G + +G+   G   +    +PQ +  L+ I + Q A G   + +L
Sbjct: 157 NHCLALTDDGRLFSWGCNKYGQLGLGSSHS-FHDTPQQIVCLRGIPIAQIASGGNHSFIL 215

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +    V  F WG ++  +LG + E +   P  L  +L N  V+ I+ G  + +AL  +  
Sbjct: 216 TWSRAV--FGWGKNSFGQLGLNDEYDKSHP-TLCKSLRNQKVMYISCGEDHTVALTKEG- 271

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
              V+S G G  G+LGH S  +E  P+ + + 
Sbjct: 272 --GVFSFGAGGFGQLGHNSTQNEILPKRVMEL 301



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 41  CRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
           C+   +Q +     G  H++A+T +G V+SFG+   GQLGH +T+ E  P+ +  L G  
Sbjct: 246 CKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSV 305

Query: 97  IIQAAAGAGRTMLIS-DAGQVYAF 119
           I Q A G   T+  S  +G++YAF
Sbjct: 306 ISQVACGRRHTVAFSPSSGKMYAF 329



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  +G  HS  +T    V+ +G NS GQLG     ++  P   +SL+  +++  + G  
Sbjct: 203 AQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGED 262

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ ++  G V++FG   FG+   G   T+    P+ V  L    + Q A G   T   S
Sbjct: 263 HTVALTKEGGVFSFGAGGFGQL--GHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFS 320

Query: 166 -REGRVYTF 173
              G++Y F
Sbjct: 321 PSSGKMYAF 329


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 20/310 (6%)

Query: 41  CRRENS-------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 93
           CRR  S       QA  G  HS+ + S G V+S G+NS GQLG    ++  RP  I++L+
Sbjct: 28  CRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALE 87

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVV 152
              I+  + G   ++ I   G+V+++G  S G  + G++  K ++S P+ ++ L +  ++
Sbjct: 88  TQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG--QLGIREFKKLSSIPKKIDELSSFKII 145

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           Q + G++ +  L+++GRV+++   N  +LG     P+   P   + +L+ IP+ Q+AAG 
Sbjct: 146 QVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQ-WVKSLDGIPLAQVAAGG 204

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAW 269
            +  AL+   SG + Y  G    G+L    + +  E+  +     +L  LQ   ++ G  
Sbjct: 205 AHSFALSF--SGTS-YGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDE 261

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-E 328
           H AV+ QDG+V T+G    G LG         P+VV +   V    +A G Y T   S  
Sbjct: 262 HTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSA--VSFSQIACGSYHTLAYSCT 319

Query: 329 DGDVYSFGCG 338
            G V SFGCG
Sbjct: 320 TGQVISFGCG 329



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 40/358 (11%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIR-----SLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + Y +G NSSGQLG        + R +R     SL    ++QAA G   ++L+   G V+
Sbjct: 1   MYYCWGDNSSGQLGIPAVPRA-KARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVW 59

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
           + G +S G+   G +  +    P  +++L+   +V  + G   +  + +EGRV+++  G+
Sbjct: 60  SCGNNSCGQ--LGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGS 117

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
           D +LG             +  L +  ++Q++ G+ + +ALA       V+S G    G+L
Sbjct: 118 DGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALA---QDGRVFSWGKNNHGQL 174

Query: 238 GHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC----LG 292
           G G     +  P+ ++    + L    VAAG  H+  +   G   ++GWGR       L 
Sbjct: 175 GLGENVPSQASPQWVKSLDGIPL--AQVAAGGAHSFALSFSGT--SYGWGRNNAGQLALS 230

Query: 293 HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
              E  E +  P  +  L  ++  +++ GD  T V+++DG V++FG  +S  LG   I+ 
Sbjct: 231 GKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISG 290

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDK 407
            +G        PQ+V S          +S +     + HT A +  +G++ +FG G +
Sbjct: 291 MKG--------PQVVDS---------AVSFSQIACGSYHTLAYSCTTGQVISFGCGSQ 331



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 33/281 (11%)

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-------RLGHHTEPNDVEPHPLLG 197
           SL N  ++QAA G   + +L  +G V+  S GN++       R   H  P  ++      
Sbjct: 33  SLGNQTLLQAACGERHSLLLLSDGTVW--SCGNNSCGQLGRKRCQKHGRPAQIQ------ 84

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQL 256
            LE   +V ++ G  + LA+ C+     V+S G G  G+LG    +     P+ I++  L
Sbjct: 85  ALETQDIVSVSCGKEHSLAI-CKEG--RVFSWGSGSDGQLGIREFKKLSSIPKKIDE--L 139

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIH 315
            + + + V+ G +H+  + QDGRV +WG   +G LG G N   ++ P+ V++L+ +    
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQ 199

Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
           VA G   +F +S  G  Y +G   +  L       G+      +  P  +  LK++  +V
Sbjct: 200 VAAGGAHSFALSFSGTSYGWGRNNAGQLA----LSGKKESAEQISKPFSIGELKRL--QV 253

Query: 376 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
             IS  +      HT  LT+ GK++ FG+ D GQLG +L++
Sbjct: 254 TYISCGDE-----HTAVLTQDGKVFTFGSNDSGQLGRQLIS 289


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 23/292 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LG+GT    W P+ I   L+G ++   + G   T
Sbjct: 137 GEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++  GQ++ FG  +FG   +G + +   + P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEV 254

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    +IA G+   + 
Sbjct: 255 IVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKP-TCVASLIDYDFCRIACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V S+G  + G+LG+  R+D K P LIE   ++    V VA G++H AV+  
Sbjct: 314 LTT--SGQ-VLSMGNTVYGQLGN-PRSDGKLPCLIED--IMGEHVVQVACGSYHVAVLTN 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
              V TWG G  G LGHG+ E   +P +V++L D    H+A G   T  + +
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAICQ 419



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G++S G   +G +   +   P+LVES
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G +YT+  G  N   LG+ T+ +   P  + G LE   
Sbjct: 126 LAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQ 185

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  ++ G  +    A   S   +++ G G  G LGHG+R     PR +E   L  L+ + 
Sbjct: 186 VAYVSCGTWH---TALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVE--SLSGLKTIA 240

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E +  P  V +L D  
Sbjct: 241 VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYD 300

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G V S G         N +    GN  ++   P L+  +  + 
Sbjct: 301 FCRIACGHSLTVGLTTSGQVLSMG---------NTVYGQLGNPRSDGKLPCLIEDI--MG 349

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 350 EHVVQVACG-----SYHVAVLTNKSEVFTWGKGANGRLG 383



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +PK +++   +   HV  G     +V+++G+V+++G      LGH +  D         +
Sbjct: 67  LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS--------V 118

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P+LV SL   N  +V            HT A+T SG+LY +G G      I L+ N T+
Sbjct: 119 HPRLVESLAICNVDIVACG-------EFHTCAVTTSGELYTWGDGTH---NIGLLGNGTD 168

Query: 421 RGN--PERV 427
             +  P+R+
Sbjct: 169 VSHWIPKRI 177


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 28/309 (9%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P P+ +L G +I+QAA G    
Sbjct: 47  VAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHC 106

Query: 108 MLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 161
           + + D G+ YA+G + +G    E E    GT+ +    P        + V Q A G   +
Sbjct: 107 LAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHS 166

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 217
            VL++EG V+T+        G    P D++    P  + G LE + V  IA G  + LAL
Sbjct: 167 VVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRV--IAVGAFHNLAL 215

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                 + +++ G    G+LG G       P  +E    L+L  V +AAG WH+  +  D
Sbjct: 216 T---EDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTALTID 270

Query: 278 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G V  WG G +G LG G+++    VP  V+ L     + V+ G   +  ++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYG 330

Query: 337 CGESASLGH 345
            G+   LG+
Sbjct: 331 RGDHGRLGY 339



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 34/374 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V ++GS   GQLG G  EE+  P  + +L    +    AG+  ++ I D G+++ +G + 
Sbjct: 10  VLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWNQ 69

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G   +  + TK  +SP  V++L    +VQAAIG +    +  +GR Y  +WG +   G 
Sbjct: 70  RGTLGHPPE-TKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAY--AWGGN-EYGQ 125

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             E  + +         +IP+ Q     C L     Q +    +SV   +  + GH    
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQ----RCALKLKVRQVAAGGTHSV---VLTQEGHVWTW 178

Query: 244 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            +  P     ++    ++  L+ V V+A GA+H   + +D  +  WG   YG LG G+ +
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQ 238

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             S P  V+ L+D+  + +A G + +  ++ DG+VY++G GE   LG        G+  +
Sbjct: 239 PRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGF-------GDDKS 291

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
           + + P  V  L    E +VQ+S   +     H+ AL   G+++++G GD G+LG      
Sbjct: 292 SHMVPLKVELL--AGEDIVQVSCGGT-----HSVALARDGRMFSYGRGDHGRLGY---GR 341

Query: 418 QTERGNPERVDIDL 431
           +   G+P  + I+L
Sbjct: 342 KVTTGHPMELPINL 355



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 29/268 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--------PRPIRSLQGIRII 98
           QA  G  H +AV  KG  Y++G N  GQ G     +E          P P R    +++ 
Sbjct: 98  QAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR 157

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q AAG   +++++  G V+ +G+       +     K +++P  V+ L+ + V+  A+G 
Sbjct: 158 QVAAGGTHSVVLTQEGHVWTWGQ------PWPPGDIKQISTPVRVQGLEKVRVI--AVGA 209

Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           F    L+ +  V  ++WGN+   +LG        +P  + G L ++ +V IAAG  +  A
Sbjct: 210 FHNLALTED--VILWAWGNNEYGQLGTGDTQPRSQPIRVEG-LSDLSLVDIAAGGWHSTA 266

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV-VAAGAWHAAVV 274
           L        VY+ G G  G+LG G   D+K   ++  + +LL  + +V V+ G  H+  +
Sbjct: 267 LTIDGE---VYAWGRGEHGRLGFG---DDKSSHMVPLKVELLAGEDIVQVSCGGTHSVAL 320

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVP 302
            +DGR+ ++G G +G LG+G +     P
Sbjct: 321 ARDGRMFSYGRGDHGRLGYGRKVTTGHP 348



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 100/252 (39%), Gaps = 45/252 (17%)

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           +A      AV + G G  G+LG G   ++  P  +E      +  VV  AG+ ++  +  
Sbjct: 1   MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVV--AGSRNSLAICD 58

Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DGR+ TWGW + G LGH  E + ES P  V AL   K +  A G +    V + G  Y++
Sbjct: 59  DGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAW 118

Query: 336 GCGESASLGHNAIADGQGNR--------------------------HANVLT-------- 361
           G  E    G        G R                          H+ VLT        
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTW 178

Query: 362 --PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVN 416
             P     +KQ++   RV  +     I   A H  ALTE   L+A+G  + GQLG     
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLG---TG 235

Query: 417 NQTERGNPERVD 428
           +   R  P RV+
Sbjct: 236 DTQPRSQPIRVE 247


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 138/311 (44%), Gaps = 34/311 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           + I G   ++ +T  G V  FG N+ GQLG G T     P P+ +L    II    G   
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDH 204

Query: 107 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKL---------------------------VT 138
           ++ ++ AG V+ +G +  G+  +  V+ T++                            T
Sbjct: 205 SIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYT 264

Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND--VEPHPLL 196
            P LV  L+ I +     G   T +LS  G VY+F       LG  +E      +P  + 
Sbjct: 265 LPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIK 324

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQ 255
            T  N  + Q+++G  + L L    SG  VYS G G  G+LG G  T  +  P L++ F 
Sbjct: 325 FTETNEKIKQLSSGASHTLFLT---SGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFN 381

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
              ++ V VAAG  H+  +   GRV TWG G  G LGHGNE  E++PK +   +    I 
Sbjct: 382 QNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVID 441

Query: 316 VATGDYTTFVV 326
           +  G   + V+
Sbjct: 442 IFAGIDNSLVL 452



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 160/378 (42%), Gaps = 63/378 (16%)

Query: 21  QKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT 80
           ++ G SW  +  FLL  E   + EN   I+             VY +G+N SG +     
Sbjct: 84  KQFGSSW--LNSFLLTDE---QNENDPTISNK-----------VYMWGTNKSGNMS--LP 125

Query: 81  EEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
            E++R P  I  L+   + +   G   T++++  G+V  FG+++FG+   G+  T+  T+
Sbjct: 126 SEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQ--LGLGDTRNRTA 183

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND------------ARLGHHTEP 187
           P  VE+L N  ++   +G   +  +++ G V  F WG +             R+   TE 
Sbjct: 184 PTPVETLNNQHIIDIGVGLDHSIAVTKAGHV--FGWGYNVEGQIGQKVVEYTRMNSTTEV 241

Query: 188 NDVEPH-------------------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            D E                      L+  LE I +  +  GY     L+ + +   VYS
Sbjct: 242 MDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGN---VYS 298

Query: 229 VGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            G    G LG GS    +   P  I +F   N +   +++GA H   +   G V + GWG
Sbjct: 299 FGSNEIGTLGLGSELKGRVTKPTKI-KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWG 357

Query: 287 RYGCLGHGNEECE-SVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
             G LG G +      P +++  N   +K + VA G   +  + + G VY++G G +  L
Sbjct: 358 TEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKL 417

Query: 344 GHNAIADGQGNRHANVLT 361
           GH   +D    +  N  +
Sbjct: 418 GHGNESDENLPKQINFFS 435



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 168/381 (44%), Gaps = 67/381 (17%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGRTMLISD------ 112
           S+  ++SFGS  + +LG     ++  P  I  L   ++I Q  +    + L++D      
Sbjct: 45  SRQKLFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTDEQNEND 104

Query: 113 ---AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
              + +VY +G +  G      +  +    P  ++ LKN FV +   G  FT VL+R+G+
Sbjct: 105 PTISNKVYMWGTNKSGNMSLPSEQYRF---PTTIDLLKNTFVEKVIGGRSFTLVLTRDGK 161

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  F   N  +LG     N   P P + TL N  ++ I  G  +  ++A   +G  V+  
Sbjct: 162 VLGFGENNFGQLGLGDTRNRTAPTP-VETLNNQHIIDIGVGLDH--SIAVTKAG-HVFGW 217

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGRVCTWG 284
           G  + G++G          +++E  ++ +   V+       AG+    ++          
Sbjct: 218 GYNVEGQIGQ---------KVVEYTRMNSTTEVMDGEEEGGAGSLREQMI---------- 258

Query: 285 WGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
                       + E ++P +V  L  +K  +V  G  +TF++S  G+VYSFG  E  +L
Sbjct: 259 -----------PDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTL 307

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G  +   G+      V  P  +    + NE++ Q+S   S     HT  LT  G +Y+ G
Sbjct: 308 GLGSELKGR------VTKPTKI-KFTETNEKIKQLSSGAS-----HTLFLTSGGNVYSCG 355

Query: 404 AGDKGQLGIELVNNQTERGNP 424
            G +G+LG+ +  + + R +P
Sbjct: 356 WGTEGRLGLGM--DTSNRDSP 374


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 27/292 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
           G  HS AVT  G +Y++G    G LGHG     W P+ +  L +GI +   A G   T +
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 426

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
           ++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  V+AA G + TA +     
Sbjct: 427 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
                     G+++T+  G+ +RLGH     D EP  +   +  L      Q+A G+   
Sbjct: 485 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 540

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    SG  VY++G  + G+LG+    D K P  +E  +L       +A GA+H AV+
Sbjct: 541 VALTT--SGH-VYTMGSPVYGQLGN-PHADGKVPTRVEG-KLHKSFVEEIACGAYHVAVL 595

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
                V TWG G  G LGHG+ +  + P +V++L D +   +A G   T  V
Sbjct: 596 TSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 148/339 (43%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+ +++G++S G   +GV     V  P+L+++
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDA 355

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L    +   A G + +  ++  G +YT+  G+   LGH  E +   P  +   +E I V 
Sbjct: 356 LSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 415

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            IA G  +   +    S   +++ G G  G LGHG R     PR ++   L  L+ V  A
Sbjct: 416 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 470

Query: 266 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            G WH A V +             G++ TWG G    LGHG++E + VP  V AL +   
Sbjct: 471 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 530

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             VA G   T  ++  G VY+ G      LG         N HA+   P  V       E
Sbjct: 531 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV-------E 574

Query: 374 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
             +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 575 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 613



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG  +  + PR + SL+G+R ++AA G  
Sbjct: 415 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 474

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G        +G +  KLV  P  V +L      Q
Sbjct: 475 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQ 532

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  T  L+  G VYT       +LG+      V P  + G L    V +IA G  +
Sbjct: 533 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVEGKLHKSFVEEIACGAYH 591

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
           +  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA  
Sbjct: 592 VAVLT---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC 648

Query: 269 WHAAVVGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHV 316
            H    G D  +C+       +   R+ C   G   C S       K   A N  K   V
Sbjct: 649 LHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCTNKKSLKACMAPNPNKPYRV 708

Query: 317 ATGDYTTFVVSEDGDVYSFGC---GESASLGHNAI---------ADGQGNRHANVLTPQL 364
               +     + + D  S       ES + G +AI         +DGQ  R +      L
Sbjct: 709 CDRCFNKLKKAMETDPSSHSSLSRRESVNQGSDAIDRDEKLDTRSDGQLARFS------L 762

Query: 365 VTSLKQVNER 374
           +  ++QV+ R
Sbjct: 763 LEPMRQVDSR 772



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 40/303 (13%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N   P  L+ 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 354

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F + 
Sbjct: 355 ALSTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 410

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    +A G +H AVV   G++ T+G G +G LGHG+ +   +P+ V +L  ++ +  A
Sbjct: 411 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 470

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+ + LGH       G++    L P  V
Sbjct: 471 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 522

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 523 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 571

Query: 426 RVD 428
           RV+
Sbjct: 572 RVE 574



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 22/185 (11%)

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y VG  L  K+      D   P+ +E   +L++Q   +A G  HA +V + G   +WG  
Sbjct: 283 YRVGSSLEIKM------DSLLPKALESTIVLDVQ--YIACGGQHAVLVTKQGESFSWGEE 334

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LGHG +     PK++ AL+      VA G+Y +  V+  GD+Y++G G+   LGH 
Sbjct: 335 SEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH- 393

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                 GN  ++ +        K+VN  +  I +++      HT  +T +G+L+ FG G 
Sbjct: 394 ------GNEVSHWVP-------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 440

Query: 407 KGQLG 411
            G LG
Sbjct: 441 FGVLG 445


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 171/351 (48%), Gaps = 26/351 (7%)

Query: 44   ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
            E  + + G   +  + + GVV S G  S G+LG G +++  R   I +LQG  + Q A  
Sbjct: 781  EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATS 840

Query: 104  A---GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                G  + +++ G+V+++G   +G+  +G   +     P+ +E+L+   VVQ A G   
Sbjct: 841  TGSDGHAIALTENGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALRGQEVVQVACGFKH 898

Query: 161  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +AV++ +G+++TF +G+  RLGH +  N   P  ++  LEN  + Q+A G  + + ++  
Sbjct: 899  SAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVS-- 955

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
               + V++ G G  GKLG G  + +  P  IE    + ++   ++ GA   A +  DG++
Sbjct: 956  QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKK--ISCGAQFTAALTWDGKL 1013

Query: 281  CTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
              +G  R      GN E  +     P+VV AL+    I ++ G   T  ++  G VY++G
Sbjct: 1014 FMFGQDRMC----GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWG 1069

Query: 337  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
                  LG      G  N   +V  P LV SL   N R +    T+S  W+
Sbjct: 1070 SNTDGQLGL-----GHTN---HVQEPTLVESLSGKNIRQISAGRTHSAAWS 1112



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 158/365 (43%), Gaps = 38/365 (10%)

Query: 64   VYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            VY FG+   GQL   G G       P+  +S    R  +   G   T +I++ G V + G
Sbjct: 752  VYLFGAGRHGQLAEVGSGVL----VPQLTKSFHEAR--KVVCGQNCTFIINNNGVVLSCG 805

Query: 121  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGN 177
            + S+G    G   +        + +L+   V Q A     +     L+  G V+++  G+
Sbjct: 806  EGSYGRLGQG--NSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGD 863

Query: 178  DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
              +LGH        P  +   L    VVQ+A G+ +   +        +++ G G  G+L
Sbjct: 864  YGKLGHGNSDRQRRPRQI-EALRGQEVVQVACGFKHSAVVTIDGK---LFTFGYGDYGRL 919

Query: 238  GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW--GWGRYGCLGHGN 295
            GHGS T++K P  +    L N     VA G  H  +V QD  +  W  G G YG LG G 
Sbjct: 920  GHGSTTNKKIPERV--MALENYIIGQVACGLNHTVIVSQDN-LTVWACGDGDYGKLGIGG 976

Query: 296  EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
               ++ P  ++ L+ V    ++ G   T  ++ DG ++ FG         + +      R
Sbjct: 977  TSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFG--------QDRMCGNCETR 1028

Query: 356  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
             +    PQ+VT+L   +  ++ IS+        HT ALT  G +Y +G+   GQLG+   
Sbjct: 1029 TSPSFNPQVVTALS--SHHIIDISVGAE-----HTIALTSKGIVYTWGSNTDGQLGLGHT 1081

Query: 416  NNQTE 420
            N+  E
Sbjct: 1082 NHVQE 1086



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA   +E  Q   G  HS  VT  G +++FG    G+LGHG+T  +  P  + +L+   I
Sbjct: 882  EALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYII 941

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+++S D   V+A G   +G  + G+ GT   TSP  +E L  + + + + 
Sbjct: 942  GQVACGLNHTVIVSQDNLTVWACGDGDYG--KLGIGGTSAKTSPTKIEVLSRVGIKKISC 999

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLL 215
            G  FTA L+ +G+++ F  G D   G+         +P + T L +  ++ I+ G  + +
Sbjct: 1000 GAQFTAALTWDGKLFMF--GQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTI 1057

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            AL    S   VY+ G    G+LG G     + P L+E     N++   ++AG  H+A
Sbjct: 1058 ALT---SKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQ--ISAGRTHSA 1109



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 30/212 (14%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 283
            V S G G  G+LG G+  D      I   Q   ++ +  + G+  HA  + ++G V +W
Sbjct: 800 VVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSW 859

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G YG LGHGN + +  P+ ++AL   + + VA G   + VV+ DG +++FG G+   L
Sbjct: 860 GDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRL 919

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESG- 397
           GH +                  T+ K++ ERV  ++L N I         HT  +++   
Sbjct: 920 GHGS------------------TTNKKIPERV--MALENYIIGQVACGLNHTVIVSQDNL 959

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            ++A G GD G+LGI      + + +P ++++
Sbjct: 960 TVWACGDGDYGKLGI---GGTSAKTSPTKIEV 988



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 37/191 (19%)

Query: 47   QAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            Q   G  H++ V+   + V++ G    G+LG G T  +  P  I  L  + I + + GA 
Sbjct: 943  QVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQ 1002

Query: 106  RTMLISDAGQVYAFGKDSF-GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++  G+++ FG+D   G  E     T    +PQ+V +L +  ++  ++G   T  L
Sbjct: 1003 FTAALTWDGKLFMFGQDRMCGNCE---TRTSPSFNPQVVTALSSHHIIDISVGAEHTIAL 1059

Query: 165  SREGRVYTFSWGNDARLG-----HHTEPNDVEP--------------------------- 192
            + +G VYT+    D +LG     H  EP  VE                            
Sbjct: 1060 TSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCEHDDAG 1119

Query: 193  HPLLGTLENIP 203
            H LLGT E+IP
Sbjct: 1120 HTLLGTPESIP 1130


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 154/300 (51%), Gaps = 9/300 (3%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  QA +G  HS+ + S G V++ G NS GQLG        RP  I++L+ + +   + G
Sbjct: 22  ELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCG 81

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ +   G+V+A+G  S G+   G +  +L  +P  V++L  I ++Q + G++ +  
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMKVKALAGIKIIQVSCGHYHSLA 140

Query: 164 LSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           LS++G+V  FSWGN++  +LG   E    E    + +LE IP+ Q+AAG  +  AL+   
Sbjct: 141 LSQDGQV--FSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSG 198

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +     S   G     G+        PR I   + L +  V ++ G+ H AV+ QDG+V 
Sbjct: 199 TSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGV--VYISCGSEHTAVLTQDGKVF 256

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G    G LGHG    +  P++V+ ++ + +  +  G Y T V V     V SFG G S
Sbjct: 257 TFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVS-QIDCGSYHTLVYVYTTRQVISFGRGPS 315



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 21/277 (7%)

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G  + QAA+G   ++L+   G V+A G +S G+   G +G      P L+++L+ + V  
Sbjct: 20  GAELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDL 77

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
            + G   +  +  +GRV+ +  G++ +LG   E  ++   P+ +  L  I ++Q++ G+ 
Sbjct: 78  LSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKALAGIKIIQVSCGHY 136

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
           + LAL+       V+S G    G+LG G     ++ P+ ++  + + L    VAAG  H+
Sbjct: 137 HSLALS---QDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPL--AQVAAGGAHS 191

Query: 272 AVVGQDGRVCTWGWGRYG--CLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSE 328
             +   G    WG    G   L   N   +S  P+ + AL ++  ++++ G   T V+++
Sbjct: 192 FALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQ 251

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
           DG V++FG   S  LGH   A+ +G        PQLV
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKRG--------PQLV 280



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 17/204 (8%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V++ G    G+LG       K P LI+  + LN+   +++ G  H+  V   GRV  WG
Sbjct: 41  TVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVD--LLSCGKEHSLAVCHKGRVFAWG 98

Query: 285 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  G LG G  +E    P  V+AL  +K I V+ G Y +  +S+DG V+S+G      L
Sbjct: 99  AGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQL 158

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G        G    +  +PQ V SL+        I L       AH+FAL+ SG  + +G
Sbjct: 159 G-------LGKEFLSQESPQRVKSLEG-------IPLAQVAAGGAHSFALSLSGTSFGWG 204

Query: 404 AGDKGQLGIELVNNQTERGNPERV 427
           + + GQL +   N   +   P  +
Sbjct: 205 SNNAGQLALSGNNVPVQSYKPRSI 228



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 40/271 (14%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           QAA G   + +L  +G V+     +  +LG    P+   P  L+  LE + V  ++ G  
Sbjct: 25  QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPG-LIQALETLNVDLLSCGKE 83

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA------ 266
           + LA+ C      V++ G G  G+LG G            +F+ LN  P+ V A      
Sbjct: 84  HSLAV-CHKG--RVFAWGAGSEGQLGIG------------EFKELNFTPMKVKALAGIKI 128

Query: 267 -----GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGD 320
                G +H+  + QDG+V +WG   +G LG G E   +  P+ V++L  +    VA G 
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             +F +S  G  + +G   +  L  +       N       P+ + +LK++   VV IS 
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSG-----NNVPVQSYKPRSIGALKELG--VVYISC 241

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +      HT  LT+ GK++ FG    GQLG
Sbjct: 242 GSE-----HTAVLTQDGKVFTFGDNSSGQLG 267


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 37/297 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
           G  HS AVT  G +Y++G    G LGHG     W P+ +  L +GI +   A G   T +
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
           ++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  V+AA G + TA +     
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 523

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                     G+++T+  G+ +RLGH  +   + P   +  L      Q+A G+   +AL
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 582

Query: 218 ACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLIEQFQLLNLQPVVVAAGAW 269
               SG  VY++G  + G+LG+        +R D K H   +E+          +A GA+
Sbjct: 583 TT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE----------IACGAY 629

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           H AV+     V TWG G  G LGHG+ +  + P +V++L D +   +A G   T  V
Sbjct: 630 HVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+ +++G++S G   +GV     V  P+L+++
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDA 394

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L    +   A G + +  ++  G +YT+  G+   LGH  E +   P  +   +E I V 
Sbjct: 395 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 454

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            IA G  +   +    S   +++ G G  G LGHG R     PR ++   L  L+ V  A
Sbjct: 455 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 509

Query: 266 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            G WH A V +             G++ TWG G    LGHG++E + VP  V AL +   
Sbjct: 510 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 569

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             VA G   T  ++  G VY+ G      LG         N HA+   P  V       +
Sbjct: 570 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV-------D 613

Query: 374 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
             +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 614 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 652



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 144/303 (47%), Gaps = 40/303 (13%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N   P  L+ 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 393

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F + 
Sbjct: 394 ALNTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 449

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    +A G +H AVV   G++ T+G G +G LGHG+ +   +P+ V +L  ++ +  A
Sbjct: 450 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 509

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+ + LGH       G++    L P  V
Sbjct: 510 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 561

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 562 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 610

Query: 426 RVD 428
           RVD
Sbjct: 611 RVD 613



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG  +  + PR + SL+G+R ++AA G  
Sbjct: 454 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 513

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G        +G +  KLV  P  V +L      Q
Sbjct: 514 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQ 571

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  T  L+  G VYT       +LG+      V P  + G L    V +IA G  +
Sbjct: 572 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEIACGAYH 630

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
           +  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA  
Sbjct: 631 VAVLT---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC 687

Query: 269 WHAAVVGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHV 316
            H    G D  +C+       +   R+ C   G   C S       K   A N  K   V
Sbjct: 688 LHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRV 747

Query: 317 ATGDYTTFVVSEDGDVYSFGC---GESASLGHNAI---------ADGQGNRHANVLTPQL 364
               +     + + D  S       ES + G +AI         +DGQ  R +      L
Sbjct: 748 CDRCFNKLKKAMETDPSSHSSLSRRESVNQGSDAIDRDEKLDTRSDGQLARFS------L 801

Query: 365 VTSLKQVNER 374
           +  ++QV+ R
Sbjct: 802 LEPMRQVDSR 811



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 331 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 388

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PK++ ALN      VA G+Y +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH-------GNEVSHWVP 441

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 442 -------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 484


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G     L +  G+V+ +G++  G   +G      ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   + G F T  ++  G +  F+WG    N   LG  TE +   P  + G LE 
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +    A   S   +Y+ G G  G LGHG R    +P+ +E   L   + 
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417

Query: 262 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A    V  Q G      ++ TWG G    LGHG++E   VPK VQAL + 
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               +A G   T  ++  G V++ G   +  LG N  +DG+         P LV   +  
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLA 527

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +E V +IS   S     H   LT   ++Y +G G  G+LG
Sbjct: 528 SELVEEISCGAS-----HVTVLTSRSEVYTWGMGANGRLG 562



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G ++++G  S   G LG GT    W P+ +   L+G++++  A G+  +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            L + +G++Y FG  +FG   +G + T  +  P+ VE+L     ++ A G + +A +   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433

Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                      ++YT+  G+  RLGH  +   + P  +   LE     Q+A G+   +AL
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YNFHQLACGHNMTVAL 492

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A   +   V+++G    G+LG+  ++D K P L+ Q +L +     ++ GA H  V+   
Sbjct: 493 A---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLTSR 547

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
             V TWG G  G LGHG+ +    P +V+AL D     ++ G ++TT +
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +Y+FG  + G LGHG  E    P+ + +L G + I+ A G   +  I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          + ++Y +G        +G +  +LV  P+ V++L      Q A G+  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYNFHQLACGHNM 488

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  GRV+T    ++ +LG + + +  +P  +   L +  V +I+ G  ++  L   
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
            S   VY+ G G  G+LGHG   D K P L+E  +  +++ +   +        H  V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
            D  VCT       +   R+ C   G   C   S  KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 33/339 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H    T +G V+++G    G+LGHGT  +  RP+ + SL    +   + G  
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
            T  ++ +G ++ +G  S+     G         P+ V   L+ + V+  A G++ +A+ 
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378

Query: 165 SREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA- 218
           +  G++YTF  G    LGH        P +VE       L     +++A G  +  A+  
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKEVE------ALSGFKTIKVACGIWHSAAIVE 432

Query: 219 ------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWH 270
                        +Y+ G G   +LGHG    +K PRL+ +    LL      +A G   
Sbjct: 433 VTNQTGANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYNFHQLACGHNM 488

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
              +   GRV T G    G LG+   + +    V   L       ++ G     V++   
Sbjct: 489 TVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRS 548

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +VY++G G +  LGH  + D +         P LV +LK
Sbjct: 549 EVYTWGMGANGRLGHGDLKDRK--------KPCLVEALK 579


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W P+ I  +L G+ +   + G   T
Sbjct: 214 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 273

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G      ++ P+ VESL  +  +  A G + TA +   
Sbjct: 274 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 331

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  + + ++P   + +L +    ++A G+   + 
Sbjct: 332 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 389

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
             C  +   V S+G  + G+LG+ + +D + P L+E  ++     + VA G++H AV+  
Sbjct: 390 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 445

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 446 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 488



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 145 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ 
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDG 260

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +PV  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ 
Sbjct: 261 LPVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKT 315

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D
Sbjct: 316 IAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID 375

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V S G         N++    GN +++   P LV   + 
Sbjct: 376 YDFYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RI 425

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 426 AGEHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 461



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 112 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 170

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           R G V  F+WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 171 RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 224

Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
             +Y+ G G    G LGHG+      P+ I    L  L    V+ G WH A++   G++ 
Sbjct: 225 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 283

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 330
           T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E            G
Sbjct: 284 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 343

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+     T
Sbjct: 344 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 388

Query: 391 FALTESGKLYAFGAGDKGQLG 411
             LT SGK+ + G    GQLG
Sbjct: 389 VCLTTSGKVLSMGNSVYGQLG 409


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 37/334 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS A+   G +Y +GSN   +LG G ++E E  PR + +L+G++I+  + G   T  
Sbjct: 91  GASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAA 150

Query: 110 ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVL 164
           +   G++Y++G       G    G  G K   +P+L+ +L  + + ++    G F T  L
Sbjct: 151 VDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVAL 210

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           S++G ++ +  G   RLG+        P P+        VV IAAG  +  AL       
Sbjct: 211 SKDGEIWAWGNGEYGRLGNGESDTCEVPEPI-EFFSKDNVVSIAAGRDFSFALT---DNG 266

Query: 225 AVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            +YS G       G+GG L       E  P L+E F  L+++ +  AAG  HAA V  DG
Sbjct: 267 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQI--AAGYDHAAAVTDDG 324

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           R+  WG            +    P  + A+N+ K + VA G   T  +SE+G+V++FG G
Sbjct: 325 RLYMWG-----------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKG 373

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            S  LGH       G+R  N L P  + +L  VN
Sbjct: 374 SSNCLGH-------GDRK-NQLQPVQIEALADVN 399



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 52/375 (13%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHG--------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           A +++  VY++G+ + GQLGHG           EE  P+ + + +G  I     GA  + 
Sbjct: 37  AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSA 96

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            I + G++Y +G + + +   G + +++ T P+ VE+LK + +V  + G++FTA +  +G
Sbjct: 97  AIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADG 155

Query: 169 RVYTFSWGNDARLGHHTEPNDV---EPHP-LLGTL--ENIPVVQIAAGYCYLLALACQPS 222
           ++Y++ WG     G     +     EP P LL TL  + +P++ +  G  + +AL+    
Sbjct: 156 KMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGE 215

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              +++ G G  G+LG+G     + P  IE F   N+  V +AAG   +  +  +G + +
Sbjct: 216 ---IWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNV--VSIAAGRDFSFALTDNGELYS 270

Query: 283 WGWGRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           WG      LG G          ES+P +V+A N +    +A G      V++DG +Y +G
Sbjct: 271 WGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                                  + P  +T++ +   ++VQ++         +T AL+E+
Sbjct: 331 S-------------------KIWIEPHEMTAVNEY--KMVQVACGRQ-----YTVALSEN 364

Query: 397 GKLYAFGAGDKGQLG 411
           G+++ FG G    LG
Sbjct: 365 GEVFTFGKGSSNCLG 379



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 149/327 (45%), Gaps = 30/327 (9%)

Query: 94  GIRIIQAAAGAGRTML---ISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVE 144
           G R   A + A R+ L    S    VY +G  + G+       + G++      +P+L+E
Sbjct: 19  GCRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLE 78

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
           + +   +     G   +A +  +G++Y +     ++LG   E +++E  P  +  L+ + 
Sbjct: 79  AFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGVK 137

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLN 258
           +V ++ G  +  A+        +YS G G       G LGH    DE  PRL+       
Sbjct: 138 IVDVSCGDYFTAAVDADGK---MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQG 194

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           +  + V  G +H   + +DG +  WG G YG LG+G  +   VP+ ++  +    + +A 
Sbjct: 195 VPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAA 254

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQ 377
           G   +F ++++G++YS+G      LG   I  G      N+ + P LV +   ++  V Q
Sbjct: 255 GRDFSFALTDNGELYSWGGNSQNQLG---IGGGLAMDVYNIESIPVLVEAFNGLS--VKQ 309

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGA 404
           I+         H  A+T+ G+LY +G+
Sbjct: 310 IAAGYD-----HAAAVTDDGRLYMWGS 331



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 61/244 (25%)

Query: 225 AVYSVGCGLGGKLGHG--------SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           +VY+ G G  G+LGHG        +  +E  P+L+E F+   +  V    GA H+A + +
Sbjct: 43  SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEF--GASHSAAIDE 100

Query: 277 DGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DG++  WG   Y  LG G + E E++P+ V+AL  VK + V+ GDY T  V  DG +YS+
Sbjct: 101 DGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSW 160

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLK-------------------------- 369
           G G S                 +  TP+L+T+L                           
Sbjct: 161 GWGGST---MKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIW 217

Query: 370 ------------------QVNERVVQISLTNSIYWNA---HTFALTESGKLYAFGAGDKG 408
                             +V E +   S  N +   A    +FALT++G+LY++G   + 
Sbjct: 218 AWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQN 277

Query: 409 QLGI 412
           QLGI
Sbjct: 278 QLGI 281



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 20/175 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGIRIIQAAAG 103
           AG   S A+T  G +YS+G NS  QLG G          E  P  + +  G+ + Q AAG
Sbjct: 254 AGRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAG 313

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                 ++D G++Y +             G+K+   P  + ++    +VQ A G  +T  
Sbjct: 314 YDHAAAVTDDGRLYMW-------------GSKIWIEPHEMTAVNEYKMVQVACGRQYTVA 360

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           LS  G V+TF  G+   LGH    N ++P   +  L ++ +  I+ G  ++ A+A
Sbjct: 361 LSENGEVFTFGKGSSNCLGHGDRKNQLQP-VQIEALADVNITSISCGDYHMGAIA 414



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 15/120 (12%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
           Q  AG  H+ AVT  G +Y +GS              W  P  + ++   +++Q A G  
Sbjct: 309 QIAAGYDHAAAVTDDGRLYMWGSKI------------WIEPHEMTAVNEYKMVQVACGRQ 356

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ +S+ G+V+ FGK S     +G +  +L   P  +E+L ++ +   + G++    ++
Sbjct: 357 YTVALSENGEVFTFGKGSSNCLGHGDRKNQL--QPVQIEALADVNITSISCGDYHMGAIA 414


>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
          Length = 426

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 36/295 (12%)

Query: 66  SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           + G N  GQLGHG T+    P+ I  L    I+ AA G   T+ ++D       G++  G
Sbjct: 31  NLGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGRNEKG 84

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +  +G   TK V +P+L+E L N  +V AA G   T  L+  G V+ F      +LG   
Sbjct: 85  QLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN 142

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD- 244
           +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH S    
Sbjct: 143 Q-TDAIPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKF 198

Query: 245 -----------EKHPRLIEQF-------QLLNLQPVV---VAAGAWHAAVVGQDGRVCTW 283
                      E  PR +  F       Q+L +  VV   VA G  H  V+    RV +W
Sbjct: 199 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSW 258

Query: 284 GWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G+G YG LGH  ++ E VP++V+  +     A H+  G   +F VSE G ++ +G
Sbjct: 259 GFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHIYAGYTCSFAVSEIGGLFFWG 313



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 41/312 (13%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           A  G  H++A+T        G N  GQLGHG T+    P+ I  L    I+ AA G   T
Sbjct: 65  AACGRNHTLALTD------LGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHT 118

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +
Sbjct: 119 LALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDCK 176

Query: 168 GRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPV 204
           G +Y+F      +LGH+++            D E  P              +  + N+ V
Sbjct: 177 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 236

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         +
Sbjct: 237 RDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHI 293

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            AG   +  V + G +  WG        + + E    PK VQ L   K   +A G  ++ 
Sbjct: 294 YAGYTCSFAVSEIGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SSI 346

Query: 325 VVSEDGDVYSFG 336
           +V+ D    S+G
Sbjct: 347 IVAADESTISWG 358



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 22/238 (9%)

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
           H +   VE   L+  L N  +V  A G  + LAL           +G    G+LGHG   
Sbjct: 42  HGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALT---------DLGRNEKGQLGHGDTK 92

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
             + P+LIE   L N   V  A G  H   + + G V  +G  + G LG GN+  +++P 
Sbjct: 93  RVEAPKLIEV--LSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPS 149

Query: 304 VVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHAN 358
             Q + + + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +  
Sbjct: 150 PAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDC 209

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
            L P+ V    +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 210 ELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 267



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
            G++  G+  +G   TK V +P+L+E L N  +V AA G   T  L+  GR         
Sbjct: 32  LGRNEKGQLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTDLGR------NEK 83

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH  +   VE   L+  L N  +V  A G  + LAL    S   V++ G    G+LG
Sbjct: 84  GQLGH-GDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGS---VFAFGENKMGQLG 139

Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
            G++TD    P  I    + N QP+  +A GA  + ++   G + ++G   YG LGH ++
Sbjct: 140 LGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 195

Query: 297 ------------ECESVPKVVQ------------ALNDVKAIHVATGDYTTFVVSEDGDV 332
                       +CE VP+ V              + +V    VA G   T V+     V
Sbjct: 196 GKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRV 255

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           +S+G G    LGH    D         + P+LV            I    +      +FA
Sbjct: 256 FSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAAHIYAGYTC-----SFA 302

Query: 393 LTESGKLYAFGA 404
           ++E G L+ +GA
Sbjct: 303 VSEIGGLFFWGA 314



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 23/177 (12%)

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LGHG     + P+LIE   L N   V  A G  H   +   GR         G LGHG
Sbjct: 38  GQLGHGDTKRVEAPKLIEV--LSNEVIVSAACGRNHTLALTDLGR------NEKGQLGHG 89

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           + +    PK+++ L++   +  A G   T  ++E G V++FG  +   L       G GN
Sbjct: 90  DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQL-------GLGN 142

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +   + +P  +    Q         +T        +  +   G LY+FG  + GQLG
Sbjct: 143 QTDAIPSPAQIMYNGQ--------PITKMACGAEFSMIMDCKGNLYSFGCPEYGQLG 191



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G    G LGHG+ +    PK+++ L++   +  A G   T  +++       G  E   L
Sbjct: 33  GRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGRNEKGQL 86

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH     G   R   V  P+L+  L   NE +V  +   +     HT ALTE+G ++AFG
Sbjct: 87  GH-----GDTKR---VEAPKLIEVLS--NEVIVSAACGRN-----HTLALTETGSVFAFG 131

Query: 404 AGDKGQLGIELVNNQTE 420
               GQLG+    NQT+
Sbjct: 132 ENKMGQLGL---GNQTD 145



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +   AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 278 RLVKLFDFPG-----RGAAHIYAGYTCSFAVSEIGGLFFWGATNTSR------ESTMYPK 326

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G +I   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 327 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 386

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            I+  Q A+G   + V++R+
Sbjct: 387 GIYTEQVAMGYSHSLVIARD 406



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 17/174 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 108
           G  H++ + S+  V+S+G    G+LGH   ++E  PR ++     G       AG   + 
Sbjct: 242 GTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHIYAGYTCSF 301

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +S+ G ++ +G  +                P+ V+ L    +   A G     V + E 
Sbjct: 302 AVSEIGGLFFWGATNTSRES--------TMYPKAVQDLCGWKIRSLACGKSSIIVAADES 353

Query: 169 RVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
              T SWG     G       +P        + TL+ I   Q+A GY + L +A
Sbjct: 354 ---TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIA 404


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 29/337 (8%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR +  +    I +AA GA  T+L+++ G++Y+ G +  G+  + V+       PQL+ +
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLP-NKRPQLLTA 396

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 203
           L+N  + QA  G   +  L+  G+VY  SWG++A  +LG  T+        L+ ++    
Sbjct: 397 LENYIITQACCGTAHSLALTNWGQVY--SWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQ 454

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQP 261
           VVQIAAG+ + LAL    +   +Y+ G    G+LG G  T+EK   P L++   L  +  
Sbjct: 455 VVQIAAGHYHCLALT---NSGELYAWGSNAYGQLGLG-MTNEKVSTPTLVQS--LAGVPI 508

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
             +A G  H+  V + G +  WG   +G LG  +      P  ++ L  +   +V+ GD 
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDD 568

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            +  ++  G V++ G G    LGH     G  N   N + P++V  L  +  ++ QI+  
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGH-----GSCN---NEILPRMVFEL--MGSKITQIACG 618

Query: 382 NSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNN 417
                  HT A   S GK+Y FG    GQLGI +V N
Sbjct: 619 RR-----HTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 148/265 (55%), Gaps = 13/265 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
           +QA  G  HS+A+T+ G VYS+GSN+ GQLG  T T  +  PR IRS+   +++Q AAG 
Sbjct: 403 TQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGH 462

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++++G++YA+G +++G+   G+   K V++P LV+SL  + +   A G   +  +
Sbjct: 463 YHCLALTNSGELYAWGSNAYGQLGLGMTNEK-VSTPTLVQSLAGVPIAFIACGGNHSFAV 521

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           S+ G +  F WG +   +LG + + N  +    L TL ++ V  ++ G  + + L    +
Sbjct: 522 SKSGAI--FGWGKNTFGQLGLN-DLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLT---A 575

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
           G  V++ G G  G+LGHGS  +E  PR++  F+L+  +   +A G  H  A V   G++ 
Sbjct: 576 GGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIY 633

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ 306
            +G    G LG G     + P++V+
Sbjct: 634 GFGLSGVGQLGIGIVGNYNTPQIVR 658



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 169/349 (48%), Gaps = 17/349 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAA 101
           +E ++A  G  H++ +T+ G +YS G+N  GQLGH   +    RP+ + +L+   I QA 
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQAC 406

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   ++ +++ GQVY++G ++ G+       T+ +  P+L+ S+    VVQ A G++  
Sbjct: 407 CGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHC 465

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             L+  G +Y  +WG++A  +LG       V    L+ +L  +P+  IA G  +  + A 
Sbjct: 466 LALTNSGELY--AWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNH--SFAV 521

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG A++  G    G+LG       + P  +   + L ++   V+ G   +  +   G 
Sbjct: 522 SKSG-AIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVR--YVSCGDDFSVFLTAGGG 578

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
           V T G G +G LGHG+   E +P++V  L   K   +A G  +T   V   G +Y FG  
Sbjct: 579 VFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLS 638

Query: 339 ESASLGHNAIADGQGNRHANVLTP---QLVTSLKQVNERVVQISLTNSI 384
               LG   +  G  N    V  P   Q++T   Q++E +  I   +++
Sbjct: 639 GVGQLGIGIV--GNYNTPQIVRGPWQSQILTFSVQMSEELAAIKPDDTV 685



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 22/285 (7%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           +V  P+ ++ +    + +AA G   T +L+ +G++Y+    +  +LGH  E    +   L
Sbjct: 334 MVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQL 393

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
           L  LEN  + Q   G  + LAL    +   VYS G    G+LG  + T  +  PRLI   
Sbjct: 394 LTALENYIITQACCGTAHSLALT---NWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR-- 448

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA 313
            +   Q V +AAG +H   +   G +  WG   YG LG G   E  S P +VQ+L  V  
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPI 508

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             +A G   +F VS+ G ++ +G      LG N +   Q         P  + +L+ +  
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ--------FPTQLRTLRSLGV 560

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           R V      S++       LT  G ++  GAG  GQLG    NN+
Sbjct: 561 RYVSCGDDFSVF-------LTAGGGVFTCGAGTFGQLGHGSCNNE 598


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W P+ I  +L G+ +   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G      ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  + + ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
             C  +   V S+G  + G+LG+ + +D + P L+E  ++     + VA G++H AV+  
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G +YT+  G  N   LGH T+     P  + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ + 
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D  
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   T  ++  G V S G         N++    GN +++   P LV   +   
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RIAG 350

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 351 EHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 384



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 35  GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           R G V  F+WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 94  RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147

Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
             +Y+ G G    G LGHG+      P+ I    L  L    V+ G WH A++   G++ 
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 330
           T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E            G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+     T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311

Query: 391 FALTESGKLYAFGAGDKGQLG 411
             LT SGK+ + G    GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LGHGT    W P+ I  +L G+ +   + G   T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  SFG   +G      ++ P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  + + ++P   + +L +    ++A G+   + 
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
             C  +   V S+G  + G+LG+ + +D + P L+E  ++     + VA G++H AV+  
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 68  PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ 
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDG 183

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +PV  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ 
Sbjct: 184 LPVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKT 238

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID 298

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V S G         N++    GN +++   P LV   + 
Sbjct: 299 YDFYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RI 348

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 349 AGEHVLQVAC-----GSYHVAVLTGRSEVFTWGKGANGRLG 384



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 50/323 (15%)

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 35  GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           R G V+T  WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 94  RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147

Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             +Y+ G G    G LGHG  TD  H  P+ I    L  L    V+ G WH A++   G+
Sbjct: 148 GELYTWGDGTHNVGLLGHG--TDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQ 204

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------- 328
           + T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E           
Sbjct: 205 LFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 264

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+    
Sbjct: 265 AGKLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL---- 310

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
            T  LT SGK+ + G    GQLG
Sbjct: 311 -TVCLTTSGKVLSMGNSVYGQLG 332


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 159/324 (49%), Gaps = 12/324 (3%)

Query: 32  RFLLAGEACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPI 89
           R  L   + C  ++ + +A    ++AV T+ GVV + G N SGQ G G  +E     RP+
Sbjct: 342 RHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPV 401

Query: 90  RSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           ++L  Q ++ I A+ G    + ++D+G  Y++G +  G+  +    TK V  P+L+ESLK
Sbjct: 402 QALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTK-VHVPKLIESLK 460

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           +  +  A++    +AV++  G +Y F   +  +LG     +   P  L+   E   +  +
Sbjct: 461 DKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQ-LVKGFEGTEISMV 519

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  +   + C  +G  +++ G    G+LG G     K   L+    L N     VA+G
Sbjct: 520 ACGLYH--TIICTATG-GLFACGKNDYGQLGLGHNRQIKVASLV---SLPNEMVSYVASG 573

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            +H+ VV   GR  ++G   YG LG GN+  ++VP VV    + + +    G Y T ++S
Sbjct: 574 YYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLS 633

Query: 328 EDGDVYSFGCGESASLGHNAIADG 351
           E G V+ FG      LG+   AD 
Sbjct: 634 EQGQVFVFGRNNKGQLGNRGSADA 657



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 26/355 (7%)

Query: 60  SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
           + G +YS G NS G+LG G   E  +   I       I Q A+G     ++++ G V   
Sbjct: 319 ASGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTC 378

Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
           G +  G+   G    + V   + V++L++  +  + A+ G      L+  G  Y++ + +
Sbjct: 379 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYND 437

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             +LGH      V    L+ +L++  +   +  Y +  +     SG  +Y+ G    G+L
Sbjct: 438 RGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHH--SAVITDSG-ELYAFGMNDCGQL 494

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G      +  P+L++ F+   +   +VA G +H  +    G +   G   YG LG G+  
Sbjct: 495 GLDHTQHQSTPQLVKGFEGTEIS--MVACGLYHTIICTATGGLFACGKNDYGQLGLGHNR 552

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR-H 356
              V  +V   N++ + +VA+G Y + VV+  G  +SFG  +   LG        GN+ H
Sbjct: 553 QIKVASLVSLPNEMVS-YVASGYYHSVVVTNSGRTFSFGRNDYGQLG-------IGNKVH 604

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            NV  P +V      N R+V+   T   Y   HT  L+E G+++ FG  +KGQLG
Sbjct: 605 QNV--PNVVA--LSANTRMVRA--TCGCY---HTVLLSEQGQVFVFGRNNKGQLG 650



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 145/309 (46%), Gaps = 38/309 (12%)

Query: 113 AGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV--ESLKNIFVVQAAIGNFFTAVLSREGR 169
           +G++Y+ G++S+GE   G    +  +TS  L   + ++     Q A GN   AVL+ +G 
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIR-----QVASGNETLAVLTNDGV 374

Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           V T       + G  H +   +   P+   L +  V  IAA       +A   SG+A YS
Sbjct: 375 VLTCGLNKSGQCGQGHFDERVMMLRPV-QALRSQRVKFIAASNGCEHMIALTDSGLA-YS 432

Query: 229 VGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LGH + T + H P+LIE  +   L+   V+    H+AV+   G +  +G   
Sbjct: 433 WGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYH--HSAVITDSGELYAFGMND 490

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES----ASL 343
            G LG  + + +S P++V+     +   VA G Y T + +  G +  F CG++      L
Sbjct: 491 CGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGL--FACGKNDYGQLGL 548

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GHN        R   V +   + SL   NE V   S   S Y+  H+  +T SG+ ++FG
Sbjct: 549 GHN--------RQIKVAS---LVSLP--NEMV---SYVASGYY--HSVVVTNSGRTFSFG 590

Query: 404 AGDKGQLGI 412
             D GQLGI
Sbjct: 591 RNDYGQLGI 599



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 102/230 (44%), Gaps = 37/230 (16%)

Query: 205 VQIAAGYCYLLALACQP------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           V +    C L AL  QP      +   +YS G    G+LG G          IE+ QL +
Sbjct: 296 VNLDTSICKLAALKEQPMYGKCEASGELYSCGQNSYGELGTGDD--------IERHQLTS 347

Query: 259 LQPV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND- 310
           +          VA+G    AV+  DG V T G  + G  G G+ +E   + + VQAL   
Sbjct: 348 ISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQ 407

Query: 311 -VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            VK I  + G      +++ G  YS+G  +   LGH        N    V  P+L+ SLK
Sbjct: 408 RVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHE-------NLTTKVHVPKLIESLK 460

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
               R   +S         H+  +T+SG+LYAFG  D GQLG++   +Q+
Sbjct: 461 DKKLRYASVSY-------HHSAVITDSGELYAFGMNDCGQLGLDHTQHQS 503



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 5/170 (2%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E S    G  H+I  T+ G +++ G N  GQLG G   +  +   + SL    +   A+G
Sbjct: 515 EISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQ-IKVASLVSLPNEMVSYVASG 573

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              +++++++G+ ++FG++ +G+   G +  + V  P +V    N  +V+A  G + T +
Sbjct: 574 YYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNV--PNVVALSANTRMVRATCGCYHTVL 631

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGY 211
           LS +G+V+ F   N  +LG+    + + P PL    E      V +AAG+
Sbjct: 632 LSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGF 681



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   +G  HS+ VT+ G  +SFG N  GQLG G    +  P  +      R+++A  G  
Sbjct: 568 SYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCY 627

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVL 164
            T+L+S+ GQV+ FG+++ G+         L+  P  V   KN    V  A G + T+++
Sbjct: 628 HTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLI 687

Query: 165 SREGR 169
               R
Sbjct: 688 VERKR 692


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 39/356 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR + S   + +   A G     +++  G+V+++G +S      G Q    V+ P+LVE+
Sbjct: 253 PRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNES--SRTLGHQINDSVSCPKLVEA 310

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTLENI 202
           L ++ V   A G+  T  ++  G +  +S G   RLG   +  E N   PH L G +++I
Sbjct: 311 LASVHVKAVAFGSKHTCAVTVSGELLEWSEGAH-RLGLLSNWYERNQWSPHKLFGPMDSI 369

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V +IA G  +   +    S   +++ G G  G LGHG +     P+ +E  + L ++ V
Sbjct: 370 SVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSV 426

Query: 263 VVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
             A G WH A V             G++ TWG    G LGH +++ + VP  V  L    
Sbjct: 427 --ACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYD 484

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + V+ G   T V++  G V++ G  +   LG N  ADG+     ++ T +   +LK  N
Sbjct: 485 FLQVSCGAALTVVLTSTGVVFTIGSSKHGQLG-NPHADGE-----SICTVE--GTLK--N 534

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           E V +IS  +S     H   LT  G+++ +G G  GQLG+   +N   R +P  V+
Sbjct: 535 EFVREISSGSS-----HVAVLTLKGQVFTWGKGADGQLGLGDYDN---RSSPTLVE 582



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 30/278 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  H+  +TS G ++++G  + G LGHG  +   RP+ + SL+G+R+   A G  
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPW 431

Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            T  + +          +G+++ +G    G+  +  +  KLV  P  V+ L +   +Q +
Sbjct: 432 HTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV--PTCVDLLTSYDFLQVS 489

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            G   T VL+  G V+T       +LG+ H +   +    + GTL+N  V +I++G  ++
Sbjct: 490 CGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESI--CTVEGTLKNEFVREISSGSSHV 547

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAW 269
             L  +     V++ G G  G+LG G   +   P L+E  Q  ++Q +       AA   
Sbjct: 548 AVLTLKGQ---VFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACGSNFSAAVCL 604

Query: 270 HAAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
           H  +  +D  +C+     +G+ R  + C   G+  C S
Sbjct: 605 HKGMSVKDQSICSGCQMAFGFTRKKHSCYNCGSMFCNS 642



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 24/288 (8%)

Query: 47  QAIA-GPGHSIAVTSKGVV--YSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
           +A+A G  H+ AVT  G +  +S G++  G L +     +W P  +   +  I + + A 
Sbjct: 317 KAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIAC 376

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   T +I+ +GQ++ +G  +FG   +G  QG   +  P+ VESLK + V   A G + T
Sbjct: 377 GEWHTAIITSSGQLFTYGDGTFGVLGHGDKQG---IARPKEVESLKGLRVKSVACGPWHT 433

Query: 162 AVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           A +          +  G+++T+   +  +LGH  +   + P   +  L +   +Q++ G 
Sbjct: 434 AAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVP-TCVDLLTSYDFLQVSCGA 492

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
              + L    S   V+++G    G+LG+     E    +  +  L N     +++G+ H 
Sbjct: 493 ALTVVLT---STGVVFTIGSSKHGQLGNPHADGESICTV--EGTLKNEFVREISSGSSHV 547

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           AV+   G+V TWG G  G LG G+ +  S P +V+AL       +A G
Sbjct: 548 AVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACG 595



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 20/332 (6%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q+IA G  H+  VT  G V+S+G+ SS  LGH   +    P+ + +L  + +   A G+ 
Sbjct: 265 QSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGSK 324

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVL 164
            T  ++ +G++  + + +           +   SP +L   + +I V + A G + TA++
Sbjct: 325 HTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAII 384

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
           +  G+++T+  G    LGH  +     P   + +L+ + V  +A G  +  A+       
Sbjct: 385 TSSGQLFTYGDGTFGVLGHGDKQGIARPKE-VESLKGLRVKSVACGPWHTAAVVEVTSSF 443

Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
            C      +++ G    GKLGH  +  +  P  ++     +   + V+ GA    V+   
Sbjct: 444 NCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDF--LQVSCGAALTVVLTST 501

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G V T G  ++G LG+ + + ES+  V   L +     +++G     V++  G V+++G 
Sbjct: 502 GVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGK 561

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           G    LG   + D     + N  +P LV +L+
Sbjct: 562 GADGQLG---LGD-----YDNRSSPTLVEALQ 585



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 18/123 (14%)

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           +++P++V +   +    +A G+    +V++ G+V+S+G   S +LGH  I D       +
Sbjct: 250 KALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-IND-------S 301

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           V  P+LV +L  V+ + V        + + HT A+T SG+L  +  G   +LG  L++N 
Sbjct: 302 VSCPKLVEALASVHVKAV-------AFGSKHTCAVTVSGELLEWSEG-AHRLG--LLSNW 351

Query: 419 TER 421
            ER
Sbjct: 352 YER 354


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 43/300 (14%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
           G  HS AVT  G +Y++G    G LGHG     W P+ +  L +GI +   A G   T +
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
           ++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  V+AA G + TA +     
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 489

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
                     G+++T+  G+ +RLGH     D EP  +   +  L      Q+A G+   
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 545

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLIEQFQLLNLQPVVVAA 266
           +AL    SG  VY++G  + G+LG+        +R D K H   +E+          +A 
Sbjct: 546 VALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE----------IAC 592

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           GA+H AV+     V TWG G  G LGHG+ +  + P +V++L D +   +A G   T  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+ +++G++S G   +GV     V  P+L+++
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDA 360

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L    +   A G + +  ++  G +YT+  G+   LGH  E +   P  +   +E I V 
Sbjct: 361 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 420

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            IA G  +   +    S   +++ G G  G LGHG R     PR ++   L  L+ V  A
Sbjct: 421 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 475

Query: 266 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            G WH A V +             G++ TWG G    LGHG++E + VP  V AL +   
Sbjct: 476 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 535

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             VA G   T  ++  G VY+ G      LG         N HA+   P  V       +
Sbjct: 536 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV-------D 579

Query: 374 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
             +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 618



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 144/303 (47%), Gaps = 40/303 (13%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N   P  L+ 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 359

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F + 
Sbjct: 360 ALNTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 415

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    +A G +H AVV   G++ T+G G +G LGHG+ +   +P+ V +L  ++ +  A
Sbjct: 416 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 475

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+ + LGH       G++    L P  V
Sbjct: 476 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 527

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 528 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 576

Query: 426 RVD 428
           RVD
Sbjct: 577 RVD 579



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG  +  + PR + SL+G+R ++AA G  
Sbjct: 420 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 479

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G        +G +  KLV  P  V +L      Q
Sbjct: 480 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQ 537

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  T  L+  G VYT       +LG+      V P  + G L    V +IA G  +
Sbjct: 538 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEIACGAYH 596

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
           +  L    S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA  
Sbjct: 597 VAVLT---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC 653

Query: 269 WHAAVVGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHV 316
            H    G D  +C+       +   R+ C   G   C S       K   A N  K   V
Sbjct: 654 LHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRV 713

Query: 317 ATGDYTTFVVSEDGDVYSFGC---GESASLGHNAI---------ADGQGNRHANVLTPQL 364
               +     + + D  S       ES + G +AI         +DGQ  R +      L
Sbjct: 714 CDRCFNKLKKAMETDPSSHSSLSRRESVNQGSDAIDRDEKLDTRSDGQLARFS------L 767

Query: 365 VTSLKQVNER 374
           +  ++QV+ R
Sbjct: 768 LEPMRQVDSR 777



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 297 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 354

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PK++ ALN      VA G+Y +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH-------GNEVSHWVP 407

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 408 -------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 450


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 152/292 (52%), Gaps = 23/292 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  +++ G LG+GT    W P+ I  +L+G ++   + G   T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHT 196

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++  GQ++ FG  +FG   +G + +   + P+ VESL  +  +  A G + TA +   
Sbjct: 197 ALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEV 254

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   + +L +    +IA G+   + 
Sbjct: 255 IVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFCRIACGHSLTVG 313

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  + S+G  + G+LG+  R+D K P L+E   ++    V VA G++H AV+  
Sbjct: 314 LTT--SGQ-ILSMGNTVYGQLGN-PRSDGKLPCLVED--IMGEHVVQVACGSYHVAVLTN 367

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
              V TWG G  G LGHG+ E   +P +V+AL D    H+A G   T  + +
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAICQ 419



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 152/339 (44%), Gaps = 36/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +     G     L++  G+V+ +G++S G   +G +   +   P+LVES
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G +YT+  G  N   LG+ T+ +   P  + G LE   
Sbjct: 126 LAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQ 185

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  ++ G  +    A   S   +++ G G  G LGHG+R     PR +E   L  L+ + 
Sbjct: 186 VAYVSCGTWH---TALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVE--SLSGLKTIA 240

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E    P  V +L D  
Sbjct: 241 VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYD 300

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G + S G         N +    GN  ++   P LV  +  + 
Sbjct: 301 FCRIACGHSLTVGLTTSGQILSMG---------NTVYGQLGNPRSDGKLPCLVEDI--MG 349

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 350 EHVVQVACG-----SYHVAVLTNKSEVFTWGKGANGRLG 383



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +PK +++   +   HV  G     +V+++G+V+++G      LGH +  D         +
Sbjct: 67  LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS--------V 118

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P+LV SL   N  +V            HT A+T +G+LY +G G      I L+ N T+
Sbjct: 119 HPRLVESLAICNVDIVACG-------EFHTCAVTTAGELYTWGDGTH---NIGLLGNGTD 168

Query: 421 RGN--PERV 427
             +  P+R+
Sbjct: 169 VSHWIPKRI 177


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 152/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G+VY++G++S G   +GV     V  P+LVE+
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLVEA 359

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WGN       LGH  E +   P  L G LE 
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGNGTFNFGLLGHGNEVSHWMPKRLNGPLEG 417

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 418 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRT 472

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG+++   VP  V +L 
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLV 532

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G      LG N  ADG        + P  V    
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG-NPQADG--------MVPARV---- 579

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 426 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G    G   +G + T+LV  P  V SL      Q A G+
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVASLVEPNFCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
            FT  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 544 CFTVALTTSGHVYTMGSSVYGQLG-NPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ VV      AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGVDQSMCS 668



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G VYS+G  S G+LGHG   +  +P+ + +L  + I   A G   T  ++ +
Sbjct: 322 HATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLS 381

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 382 GDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 441

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 442 FGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSG 501

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P   + +L      Q+A G+C+ +AL    +   VY+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDTRLVP-TCVASLVEPNFCQVACGHCFTVALT---TSGHVYT 557

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 558 MGSSVYGQLGN-PQADGMVPARVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 615

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ +  + P +V+AL D +   V  G
Sbjct: 616 GRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 141/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G     +++++G VY  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVY--SWGEESGGRLGHGVDCDVPQPK-LVE 358

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 359 ALAHMNIELVACGEYHTCAVTLS-GDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNG-PLE 416

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH AVV   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 476

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 528

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            SL + N    Q++  +       T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 ASLVEPN--FCQVACGHCF-----TVALTTSGHVYTMGSSVYGQLG----NPQADGMVPA 577

Query: 426 RVD 428
           RV+
Sbjct: 578 RVE 580


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 157/341 (46%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + ++Q A G     L++  G+++ +G++S G   +GV   K V  P LVE+
Sbjct: 333 PKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGV--GKNVVQPCLVEA 390

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L +  V   A G F T  ++  G +YT  WG    N   LGH T+ +   P  + G LE 
Sbjct: 391 LASSTVDFVACGEFHTCAVTMAGEIYT--WGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG 448

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +   Q+A   C     A   S   +++ G G  G LGHG R +  +PR +E   L  L+ 
Sbjct: 449 L---QVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVES--LSGLRT 503

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           V VA G WH A + +            G++ TWG G    LGHG+++    P  + AL D
Sbjct: 504 VSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALID 563

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G V++ G      LG N  +DG+         P LV   K 
Sbjct: 564 YNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLG-NPQSDGK--------LPCLVED-KL 613

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             E V +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 614 AGECVEEIAC--GAY---HVTVLTSRNEVYTWGKGANGRLG 649



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHGT    W P+ I   L+G+++     G   T
Sbjct: 402 GEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHT 461

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  +FG   +G +    ++ P+ VESL  +  V  A G + TA +   
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDREN--ISYPREVESLSGLRTVSVACGVWHTAAIVEV 519

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   +EP   +  L +    +IA G+   + 
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEP-TCISALIDYNFHRIACGHSLTVG 578

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V+++G  + G+LG+  ++D K P L+E  +L       +A GA+H  V+  
Sbjct: 579 LTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 676



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 19/235 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E    PR + SL G+R +  A G   T  I
Sbjct: 457 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAI 516

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           +G+++ +G        +G +  +L   P  + +L +    + A G+ 
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL--EPTCISALIDYNFHRIACGHS 574

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  L+  GRV+T       +LG+      + P  +   L    V +IA G  ++  L  
Sbjct: 575 LTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL-PCLVEDKLAGECVEEIACGAYHVTVLT- 632

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P L+E  +  +++   +A G+ ++A +
Sbjct: 633 --SRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK--YIACGSNYSAAI 683


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 53/375 (14%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTE--------EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           ++++  V+++G+ + GQLGHG+ E        EE  PR + + +G  I +   GA  +  
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G++Y +G + + +  +G     + + P++V++L+ I +V  + G + T  +  EG+
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120

Query: 170 VYTFSWGNDAR-----LGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPS 222
           ++T+ WG         LGH    ++  P  L+ TL  + +PV  +  G  + +AL     
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPR-LVRTLVDQGVPVKSVECGELHTVALTKDGE 179

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              +++ G G  G+LG+G+  + + P  +E F   N+    ++AG      + + G V +
Sbjct: 180 ---IWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIAS--ISAGRDFTFAITEHGEVYS 234

Query: 283 WGWGRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           WG   +  LG G          E++P VV+AL++V    V+ G      V+ DG ++ +G
Sbjct: 235 WGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
               A L                L P  +T LK  +E ++ +          +T AL+ S
Sbjct: 295 ----AKL---------------WLEPHEMTILK--DETIISVQCG-----RYYTAALSAS 328

Query: 397 GKLYAFGAGDKGQLG 411
           G L+ FG G    LG
Sbjct: 329 GNLFTFGKGHSNCLG 343



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 153/335 (45%), Gaps = 38/335 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTM 108
           G  HS A+  +G +Y++GSN   QLGHG++ ++ +  PR + +L+GI+I+  + G   T 
Sbjct: 54  GATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTG 113

Query: 109 LISDAGQVYAF---GKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAV 163
            + + G+++ +   G    G    G  G +  + P+LV +L  + + V     G   T  
Sbjct: 114 AVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVA 173

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           L+++G ++ +  G   RLG+    N   P P+     +  +  I+AG  +  A+      
Sbjct: 174 LTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVE-YFADENIASISAGRDFTFAITEHGE- 231

Query: 224 MAVYSVGC------GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
             VYS G       GLGG L       E  P ++E   L N+    V+AG  HAA V  D
Sbjct: 232 --VYSWGINSHSQLGLGGGLTVDYYNMETIPVVVE--ALSNVNVAQVSAGYDHAAAVTND 287

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G++  WG            +    P  +  L D   I V  G Y T  +S  G++++FG 
Sbjct: 288 GKMFMWG-----------AKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGK 336

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
           G S  LGH       G R    L P LV SL + N
Sbjct: 337 GHSNCLGH-------GERKTQ-LQPLLVESLNRYN 363



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 38/266 (14%)

Query: 164 LSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           +S +  V+T+  G   +LGH         +   ++ P  +L T E   + ++  G  +  
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPR-ILETFEGKNIAKLDFGATHSA 59

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAV 273
           A+  +     +Y+ G     +LGHGS   +    PR+++   L  ++ V ++ G +H   
Sbjct: 60  AIDKEGK---LYTWGSNEYHQLGHGSSNQDIQSIPRVVDA--LRGIKIVDISCGEYHTGA 114

Query: 274 VGQDGRVCTWGWGRY-----GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVV 326
           V ++G++ TWGWG       G LGH   E ES+P++V+ L D  V    V  G+  T  +
Sbjct: 115 VDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL 174

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           ++DG+++++G GE   LG N  +D       N   P+ V      +E +  IS       
Sbjct: 175 TKDGEIWAWGNGEYGRLG-NGASD-------NFEVPEPVEYF--ADENIASISAGRDF-- 222

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGI 412
              TFA+TE G++Y++G     QLG+
Sbjct: 223 ---TFAITEHGEVYSWGINSHSQLGL 245



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 19/210 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+T  G ++++G+   G+LG+G ++    P P+       I   +AG   T  I++ 
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229

Query: 114 GQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           G+VY++G +S  +   G    V    + T P +VE+L N+ V Q + G    A ++ +G+
Sbjct: 230 GEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGK 289

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +  F WG  A+L        +EPH +   L++  ++ +  G  Y  AL+   +   +++ 
Sbjct: 290 M--FMWG--AKLW-------LEPHEMT-ILKDETIISVQCGRYYTAALSASGN---LFTF 334

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           G G    LGHG R  +  P L+E     N+
Sbjct: 335 GKGHSNCLGHGERKTQLQPLLVESLNRYNV 364



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 22/190 (11%)

Query: 44  ENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGIR 96
           EN  +I AG   + A+T  G VYS+G NS  QLG G          E  P  + +L  + 
Sbjct: 211 ENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVN 270

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + Q +AG      +++ G+++ +             G KL   P  +  LK+  ++    
Sbjct: 271 VAQVSAGYDHAAAVTNDGKMFMW-------------GAKLWLEPHEMTILKDETIISVQC 317

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G ++TA LS  G ++TF  G+   LGH      ++P  L+ +L    VV +  GY ++ A
Sbjct: 318 GRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQP-LLVESLNRYNVVSMTCGYSHMGA 376

Query: 217 LACQPSGMAV 226
           L  +P   AV
Sbjct: 377 L-TKPFAEAV 385


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 40/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ +   + + Q A G     L++  G+V+ +G++  G   +G+   +  + P LVE 
Sbjct: 119 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEF 176

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G + T  ++    +YT  WG    N   LGH T+ +   P  ++G+LE 
Sbjct: 177 LAVSHVDFVACGEYHTCAITSSNDLYT--WGDGIFNSGILGHGTDISHWIPKRVVGSLEG 234

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
           + V+ +A G  +  ALA   S   +Y+ G G  G LGHG R    +PR   + QLL+ L+
Sbjct: 235 LQVLSVACG-TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLR 288

Query: 261 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            + VA G WH A    V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D
Sbjct: 289 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLID 348

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G V++ G      LG N  +DG        + P LV   + 
Sbjct: 349 YNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLG-NPSSDG--------VIPCLVQD-RL 398

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V E V +IS     Y   HT  LT   +++++G G  G+LG
Sbjct: 399 VGEFVEEISC--GAY---HTVVLTSRNEVFSWGRGSNGRLG 434



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 23/279 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRT 107
           G  H+ A+TS   +Y++G    +SG LGHGT    W P R + SL+G++++  A G   +
Sbjct: 188 GEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHS 247

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
            L +  G++Y FG  ++G   +G + +  V  P+ V+ L  +  ++ A G + TA    V
Sbjct: 248 ALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLRTIKVACGVWHTAAIVEV 305

Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +S+ G      +++T+  G+  RLGH  +   + P   + +L +    Q+A G+   +AL
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLIDYNFHQLACGHNMTVAL 364

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               +   V+++G    G+LG+ S +D   P L+ Q +L+      ++ GA+H  V+   
Sbjct: 365 T---TSGHVFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEFVEEISCGAYHTVVLTSR 419

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAI 314
             V +WG G  G LGHG+ E    P +++AL D  VK+I
Sbjct: 420 NEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSI 458



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V +P+ +E+   + V Q A G    A+++R+G V+T  WG +   RLGH  + +   PH 
Sbjct: 116 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 172

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 252
           L+  L    V  +A G  +  A+    S   +Y+ G G+   G LGHG+      P+ + 
Sbjct: 173 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 229

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  LQ + VA G WH+A+   +G++ T+G G YG LGHG+ E    P+ VQ L+ ++
Sbjct: 230 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 288

Query: 313 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            I VA G + T     V+S+ G       ++++G G+   LGH       GN+   +L P
Sbjct: 289 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH-------GNKETYLL-P 340

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             V+SL   N    Q++  +++     T ALT SG ++  G    GQLG
Sbjct: 341 TCVSSLIDYN--FHQLACGHNM-----TVALTTSGHVFTMGGTAYGQLG 382



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 23/333 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H   VT +G V+++G    G+LGHG   +  RP  +  L    +   A G   
Sbjct: 132 QIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYH 191

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 164
           T  I+ +  +Y +G   F     G  GT +      ++V SL+ + V+  A G + +A+ 
Sbjct: 192 TCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALA 250

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
           +  G++YTF  G    LGH    + V P  +   L  +  +++A G  +  A+       
Sbjct: 251 TSNGKLYTFGDGTYGVLGHGDRESVVYPREV-QLLSGLRTIKVACGVWHTAAIVEVMSQT 309

Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               S   +++ G G   +LGHG++     P  +      N   +  A G      +   
Sbjct: 310 GSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQL--ACGHNMTVALTTS 367

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G V T G   YG LG+ + +   +P +VQ  L       ++ G Y T V++   +V+S+G
Sbjct: 368 GHVFTMGGTAYGQLGNPSSD-GVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 426

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            G +  LGH  + D +         P L+ +LK
Sbjct: 427 RGSNGRLGHGDVEDRKA--------PTLIEALK 451



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 28/272 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +Y+FG  + G LGHG  E    PR ++ L G+R I+ A G   T  I
Sbjct: 243 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 302

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          + +++ +G        +G + T L+  P  V SL +    Q A G+  
Sbjct: 303 VEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL--PTCVSSLIDYNFHQLACGHNM 360

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG+ +  + V P  +   L    V +I+ G  + + L   
Sbjct: 361 TVALTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLT-- 417

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
            S   V+S G G  G+LGHG   D K P LIE  +  +++ +       A+   H  V G
Sbjct: 418 -SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 476

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECES 300
            D  VCT       +   R+ C   G   C S
Sbjct: 477 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHS 508


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 161/340 (47%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q + G+    L +  G+V+ +G++  G   +G    + ++ P+LVES
Sbjct: 245 PKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTD--EDISRPKLVES 302

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +Y  +WG    N   LGH    +   P  + G LE 
Sbjct: 303 LAVSNVEYIACGEFHTCAVTASGDLY--NWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG 360

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +  ALA   S   V++ G G  G LGHG+R +  +P+ +E   L   + 
Sbjct: 361 LQVLSVACG-SWHSALAM--SSGKVFTFGDGTFGALGHGNRENVAYPKEVES--LSGFRT 415

Query: 262 VVVAAGAWHAAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A +     Q G      ++ TWG G    LGHG++E   VP VVQAL D 
Sbjct: 416 MKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN 475

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  ++  G V++ G      LG N  ADG+         P  V   K  
Sbjct: 476 NFHQVACGYSMTIALATSGHVFTMGSSNYGQLG-NPKADGK--------QPCQVQD-KLS 525

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +E V +IS       + H   LT   ++Y +G G  G+LG
Sbjct: 526 SELVEEISCG-----SYHVAVLTSRSEVYTWGMGANGRLG 560



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 153/296 (51%), Gaps = 23/296 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+ AVT+ G +Y++G  S  +G LGHG     W P+ +   L+G++++  
Sbjct: 307 NVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSV 366

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G+  + L   +G+V+ FG  +FG   +G    + V  P+ VESL     ++ A G + 
Sbjct: 367 ACGSWHSALAMSSGKVFTFGDGTFGALGHG--NRENVAYPKEVESLSGFRTMKVACGVWH 424

Query: 161 TAVL----SREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           +A +    S+ G      +++T+  G+  RLGH  +   + P  +   ++N    Q+A G
Sbjct: 425 SAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN-NFHQVACG 483

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           Y   +ALA   +   V+++G    G+LG+  + D K P  + Q +L +     ++ G++H
Sbjct: 484 YSMTIALA---TSGHVFTMGSSNYGQLGN-PKADGKQPCQV-QDKLSSELVEEISCGSYH 538

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            AV+     V TWG G  G LGHG  E +  P +V AL D     +A G ++TT +
Sbjct: 539 VAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCI 594



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 164/343 (47%), Gaps = 47/343 (13%)

Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           I   G VY +G+       S G +      T ++  P+ +ES   + V Q + G+   A+
Sbjct: 210 IESLGDVYVWGEVWTDVIPSEGSSNLVCSKTDVLI-PKPLESDVVLDVQQISCGSRHIAL 268

Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            +R+G V+T  WG +   RLGH T+  D+    L+ +L    V  IA G  +  A+    
Sbjct: 269 TTRQGEVFT--WGEELGGRLGHGTD-EDISRPKLVESLAVSNVEYIACGEFHTCAVTA-- 323

Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y+ G G    G LGHG       P+ +    L  LQ + VA G+WH+A+    G+
Sbjct: 324 SG-DLYNWGDGSYNAGLLGHGIGASHWLPKRVSG-PLEGLQVLSVACGSWHSALAMSSGK 381

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 329
           V T+G G +G LGHGN E  + PK V++L+  + + VA G + +  + E           
Sbjct: 382 VFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVS 441

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
             ++++G G+   LGH       G++ A  L P +V +L  V+    Q++   S+     
Sbjct: 442 RKLFTWGDGDKNRLGH-------GDKEAR-LVPTVVQAL--VDNNFHQVACGYSM----- 486

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 432
           T AL  SG ++  G+ + GQLG    N + +   P +V   LS
Sbjct: 487 TIALATSGHVFTMGSSNYGQLG----NPKADGKQPCQVQDKLS 525



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 15/332 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H    T +G V+++G    G+LGHGT E+  RP+ + SL    +   A G   
Sbjct: 258 QISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFH 317

Query: 107 TMLISDAGQVYAFGKDSF--GEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAV 163
           T  ++ +G +Y +G  S+  G   +G+  +  +  P+ V   L+ + V+  A G++ +A+
Sbjct: 318 TCAVTASGDLYNWGDGSYNAGLLGHGIGASHWL--PKRVSGPLEGLQVLSVACGSWHSAL 375

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
               G+V+TF  G    LGH    N   P   + +L     +++A G  +  A+    S 
Sbjct: 376 AMSSGKVFTFGDGTFGALGHGNRENVAYPKE-VESLSGFRTMKVACGVWHSAAIVETTSQ 434

Query: 224 MAV-------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
             V       ++ G G   +LGHG +     P +++     N     VA G      +  
Sbjct: 435 TGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQ--VACGYSMTIALAT 492

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G V T G   YG LG+   + +   +V   L+      ++ G Y   V++   +VY++G
Sbjct: 493 SGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWG 552

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            G +  LGH  I D +     + L  + V S+
Sbjct: 553 MGANGRLGHGGIEDKKKPTIVDALKDRHVKSI 584


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 29/327 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T+ G VY+ G+N   QLGH    +  RP  I  LQ   ++  A G+  
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTK--RPLLIPELQNYVVVAIACGSRH 97

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +++ GQV ++G +  G+       + ++  P+++ SL +  VVQ A GN  +  L+ 
Sbjct: 98  SMALTEWGQVLSWGDNDCGQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTS 156

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALACQ 220
            G +Y  SWG++       +P     H   PL L TL  IP+  IA G  + +L++    
Sbjct: 157 CGELY--SWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLIS---- 210

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
               AV+  G    G+LG    ++  +P  ++  + L ++   VA G   +  +  +G V
Sbjct: 211 -KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGV 267

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 339
            T G G YG LGHG+   E +P++V  L       VA G+ +T  +V   G VY FG G 
Sbjct: 268 FTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGS 327

Query: 340 SASLGHNAIADGQGNRHANVLT-PQLV 365
           S  L         GNR  N +T PQ V
Sbjct: 328 SGQL---------GNRSTNSVTLPQEV 345



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 50/372 (13%)

Query: 64  VYSFGSNSSGQLGHGTTEEE---------WRPR-PIRSLQGIRIIQAAAGAGRTMLISDA 113
           ++ +G+ S GQLG G  E+E         W+P  P+R        Q A G   T+ ++  
Sbjct: 3   LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLR--------QIACGHRHTLFLTAN 54

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+VYA G +   +  + +   +    P L+  L+N  VV  A G+  +  L+  G+V   
Sbjct: 55  GKVYACGNNDQAQLGHNLPTKR----PLLIPELQNYVVVAIACGSRHSMALTEWGQV--L 108

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG++   +LG  T+ + +E   ++ +L +  VVQIA G  + LAL    S   +YS G 
Sbjct: 109 SWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT---SCGELYSWGS 165

Query: 232 GLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
            + G+LG     +  H    +    LL +    +A G  H+ ++ +   V  +G+GR  C
Sbjct: 166 NIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAV--FGFGRNNC 223

Query: 291 --LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
             LG  +E   + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH + 
Sbjct: 224 GQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGS- 282

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 407
                  + N + P++V  L  +   + Q++  N      HT AL  S G++Y FG G  
Sbjct: 283 -------NTNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYGFGLGSS 328

Query: 408 GQLGIELVNNQT 419
           GQLG    N+ T
Sbjct: 329 GQLGNRSTNSVT 340



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  ++    V+ FG N+ GQLG         P  +++L+ + +   A G   ++ +
Sbjct: 202 GGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
           ++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++   GR
Sbjct: 262 TNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVPSRGR 319

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           VY F  G+  +LG+ +  +   P  +LG
Sbjct: 320 VYGFGLGSSGQLGNRSTNSVTLPQEVLG 347


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 177/372 (47%), Gaps = 44/372 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G+ + G+LG G  EEE    PR +   Q   +++   G   T+ ++  G++YA G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 122 DSFGEAEYGVQGTKLVTSP---------QLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           +  G+      G  L T P         + + SL+N  +   + G   +  L+  G+V  
Sbjct: 63  NDHGQL-----GHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQV-- 115

Query: 173 FSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           FSWG++A  +LGH  E N  +P P ++  +    VVQIA+G  + LAL    +   +Y+ 
Sbjct: 116 FSWGSNAVGQLGHDAE-NGRQPTPRMIKAIGAKHVVQIASGQYHCLALT---NNGELYAW 171

Query: 230 GCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ +++   P LI+   L  +    +A G  H+  V + G +  WG   +
Sbjct: 172 GSNSYGQLGIGTTSEKVPMPTLIQS--LAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTF 229

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG  +      P  ++ L  +   +++ GD  +  ++ +G V++ G G    LGH + 
Sbjct: 230 GQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 407
                   +N + P+ V  L  +  ++ QI+         HT A   S GK+Y FG G  
Sbjct: 290 --------SNEIVPRKVFEL--MGSKITQIACGRR-----HTLAFVPSRGKIYGFGLGGV 334

Query: 408 GQLGIELVNNQT 419
           GQLGI +V N +
Sbjct: 335 GQLGIGMVGNHS 346



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A+T+ G V+S+GSN+ GQLGH      +  PR I+++    ++Q A+G    + 
Sbjct: 102 GTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLA 161

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +++ G++YA+G +S+G+   G    K V  P L++SL  + +   A G   +  +S+ G 
Sbjct: 162 LTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 220

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG +   +   P   L TL ++ V  I+ G  + + L  +     V+
Sbjct: 221 I--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSLGVRYISCGDDFSVFLTNEG---GVF 274

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGHGS ++E  PR +  F+L+  +   +A G  H  A V   G++  +G G
Sbjct: 275 TCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 332

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G     S P++V+
Sbjct: 333 GVGQLGIGMVGNHSTPQIVR 352



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 33/328 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIR-----SLQGIRIIQAAAGA 104
           G  H++ +T +G +Y+ G+N  GQLGH   T    RPR  R     SL+   I   + G 
Sbjct: 44  GTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGT 103

Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             ++ +++ GQV+++G ++ G    +AE G Q T     P++++++    VVQ A G + 
Sbjct: 104 AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPT-----PRMIKAIGAKHVVQIASGQYH 158

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
              L+  G +Y  +WG+++  +LG  T    V    L+ +L  +P+  IA G  +  + A
Sbjct: 159 CLALTNNGELY--AWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNH--SFA 214

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              SG A++  G    G+LG        +P  +   + L ++   ++ G   +  +  +G
Sbjct: 215 VSKSG-AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR--YISCGDDFSVFLTNEG 271

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGC 337
            V T G G +G LGHG+   E VP+ V  L   K   +A G  +T   V   G +Y FG 
Sbjct: 272 GVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGL 331

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLV 365
           G    LG   +         N  TPQ+V
Sbjct: 332 GGVGQLGIGMV--------GNHSTPQIV 351



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 6/206 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
           Q  +G  H +A+T+ G +Y++GSNS GQLG GTT E+   P  I+SL G+ I   A G  
Sbjct: 151 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGN 210

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G ++ +GK++FG+   G+        P  + +L+++ V   + G+ F+  L+
Sbjct: 211 HSFAVSKSGAIFGWGKNTFGQL--GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT 268

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            EG V+T   G   +LGH +  N++ P  +   L    + QIA G  + LA    PS   
Sbjct: 269 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-ELMGSKITQIACGRRHTLAFV--PSRGK 325

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
           +Y  G G  G+LG G   +   P+++
Sbjct: 326 IYGFGLGGVGQLGIGMVGNHSTPQIV 351


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 16/312 (5%)

Query: 39  ACCR---RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
           +CC    R   +   G  HS+ +   G VY+ GSNS GQLGH       RP  + +L   
Sbjct: 27  SCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS--RPELVGALDAQ 84

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +I   + G   ++ +++ GQV+A+G    G+   G    + V  P+L++ L    + Q  
Sbjct: 85  KISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEAVRVPRLIKKLCEHRISQVM 143

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            GN     LS++G+++ +   +  +LG    EP+ + P P L +L  IP+ QI+AG  + 
Sbjct: 144 CGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQP-LKSLCGIPLTQISAGGDHS 202

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
            AL+   SG AV+  G    G+LG     D   P  I   + L  Q VV ++ G  H A 
Sbjct: 203 FALSF--SG-AVFGWGKNSAGQLGLNDEQDRAVPCHI---KFLRSQKVVYISCGEEHTAA 256

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDV 332
           + ++G + T+G G  G LGH +   E +P+ V  L   +   +A G ++T   V   G +
Sbjct: 257 LTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLI 316

Query: 333 YSFGCGESASLG 344
           Y+FGC     LG
Sbjct: 317 YAFGCNTQGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 119/225 (52%), Gaps = 11/225 (4%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 99
           C    SQ + G  H IA++  G ++ +G NSSGQLG G  E     P+P++SL GI + Q
Sbjct: 135 CEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQ 194

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +AG   +  +S +G V+ +GK+S G  + G+   +    P  ++ L++  VV  + G  
Sbjct: 195 ISAGGDHSFALSFSGAVFGWGKNSAG--QLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            TA L++EG ++TF  G+  +LGH +  N+  P  ++  L    V QIA G  + LA   
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFV- 310

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
            PS   +Y+ GC   G+LG G R   K P  +      N+QP+ +
Sbjct: 311 -PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVS-----NIQPLCI 349



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 15/249 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  +G V+++G+   GQLG GT EE  R PR I+ L   RI Q   G    + 
Sbjct: 92  GQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S  GQ++ +G++S G+   G +G     SPQ ++SL  I + Q + G   +  LS  G 
Sbjct: 152 LSKDGQLFVWGENSSGQLGLG-KGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           V  F WG ++  +LG + E +   P H  +  L +  VV I+ G  +  AL  +     +
Sbjct: 211 V--FGWGKNSAGQLGLNDEQDRAVPCH--IKFLRSQKVVYISCGEEHTAALTKEG---GL 263

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGW 285
           ++ G G  G+LGH S  +E  PR +   +L+  +   +A G  H  A V   G +  +G 
Sbjct: 264 FTFGNGSKGQLGHDSTRNEPLPRRV--MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGC 321

Query: 286 GRYGCLGHG 294
              G LG G
Sbjct: 322 NTQGQLGTG 330



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 27/352 (7%)

Query: 63  VVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           ++  +GS+ +GQLG G +E   + PR      G  + + A G   ++ +   G VY  G 
Sbjct: 1   MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           +S G+  +   G++    P+LV +L    +   + G   +  ++ +G+V+ +  G+  +L
Sbjct: 61  NSCGQLGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G  T    V    L+  L    + Q+  G  + +AL+       ++  G    G+LG G 
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALS---KDGQLFVWGENSSGQLGLGK 173

Query: 242 -RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
                  P+ ++   L  +    ++AG  H+  +   G V  WG    G LG  +E+  +
Sbjct: 174 GEPSTLSPQPLKS--LCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VP  ++ L   K ++++ G+  T  ++++G +++FG G    LGH++          N  
Sbjct: 232 VPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDST--------RNEP 283

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
            P+ V  L  +   V QI+   +     HT A   S G +YAFG   +GQLG
Sbjct: 284 LPRRVMEL--MGTEVSQIACGRN-----HTLAFVPSTGLIYAFGCNTQGQLG 328



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 127/277 (45%), Gaps = 28/277 (10%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           + A GN  +  L  +G VYT    +  +LGH    +  E   L+G L+   +  ++ G  
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPE---LVGALDAQKISGVSCGQA 94

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHA 271
           + LA+  Q     V++ G G GG+LG G+  +  + PRLI++  L   +   V  G  H 
Sbjct: 95  HSLAVNEQGQ---VFAWGAGDGGQLGLGTAEEAVRVPRLIKK--LCEHRISQVMCGNHHC 149

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             + +DG++  WG    G LG G  E  ++ P+ +++L  +    ++ G   +F +S  G
Sbjct: 150 IALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSG 209

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            V+ +G   +  LG N   D     H   L  Q          +VV IS         HT
Sbjct: 210 AVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ----------KVVYISCGEE-----HT 254

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            ALT+ G L+ FG G KGQLG +   N+     P RV
Sbjct: 255 AALTKEGGLFTFGNGSKGQLGHDSTRNEPL---PRRV 288



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 3/159 (1%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           ++ C    +Q  AG  HS A++  G V+ +G NS+GQLG    ++   P  I+ L+  ++
Sbjct: 185 KSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKV 244

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +  + G   T  ++  G ++ FG  S G  + G   T+    P+ V  L    V Q A G
Sbjct: 245 VYISCGEEHTAALTKEGGLFTFGNGSKG--QLGHDSTRNEPLPRRVMELMGTEVSQIACG 302

Query: 158 -NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
            N   A +   G +Y F      +LG     +   P P+
Sbjct: 303 RNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPV 341


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 40/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ +   + + Q A G     L++  G+V+ +G++  G   +G+   +  + P LVE 
Sbjct: 257 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEF 314

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G + T  ++    +YT  WG    N   LGH T+ +   P  ++G+LE 
Sbjct: 315 LAVSHVDFVACGEYHTCAITSSNDLYT--WGDGIFNSGILGHGTDISHWIPKRVVGSLEG 372

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
           + V+ +A G  +  ALA   S   +Y+ G G  G LGHG R    +PR   + QLL+ L+
Sbjct: 373 LQVLSVACG-TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLR 426

Query: 261 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            + VA G WH A    V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLID 486

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G V++ G      LG N  +DG        + P LV   + 
Sbjct: 487 YNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLG-NPSSDG--------VIPCLVQD-RL 536

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V E V +IS     Y   HT  LT   +++++G G  G+LG
Sbjct: 537 VGEFVEEISC--GAY---HTVVLTSRNEVFSWGRGSNGRLG 572



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 23/279 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRT 107
           G  H+ A+TS   +Y++G    +SG LGHGT    W P R + SL+G++++  A G   +
Sbjct: 326 GEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHS 385

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
            L +  G++Y FG  ++G   +G + +  V  P+ V+ L  +  ++ A G + TA    V
Sbjct: 386 ALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLRTIKVACGVWHTAAIVEV 443

Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +S+ G      +++T+  G+  RLGH  +   + P   + +L +    Q+A G+   +AL
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLIDYNFHQLACGHNMTVAL 502

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               +   V+++G    G+LG+ S +D   P L+ Q +L+      ++ GA+H  V+   
Sbjct: 503 T---TSGHVFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEFVEEISCGAYHTVVLTSR 557

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAI 314
             V +WG G  G LGHG+ E    P +++AL D  VK+I
Sbjct: 558 NEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSI 596



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V +P+ +E+   + V Q A G    A+++R+G V+T  WG +   RLGH  + +   PH 
Sbjct: 254 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 310

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 252
           L+  L    V  +A G  +  A+    S   +Y+ G G+   G LGHG+      P+ + 
Sbjct: 311 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 367

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  LQ + VA G WH+A+   +G++ T+G G YG LGHG+ E    P+ VQ L+ ++
Sbjct: 368 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 426

Query: 313 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGHNAIADGQGNRHANVLTP 362
            I VA G + T     V+S+ G       ++++G G+   LGH       GN+   +L P
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH-------GNKETYLL-P 478

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             V+SL   N    Q++  +++     T ALT SG ++  G    GQLG
Sbjct: 479 TCVSSLIDYN--FHQLACGHNM-----TVALTTSGHVFTMGGTAYGQLG 520



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 23/333 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H   VT +G V+++G    G+LGHG   +  RP  +  L    +   A G   
Sbjct: 270 QIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYH 329

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 164
           T  I+ +  +Y +G   F     G  GT +      ++V SL+ + V+  A G + +A+ 
Sbjct: 330 TCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALA 388

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
           +  G++YTF  G    LGH    + V P  +   L  +  +++A G  +  A+       
Sbjct: 389 TSNGKLYTFGDGTYGVLGHGDRESVVYPREV-QLLSGLRTIKVACGVWHTAAIVEVMSQT 447

Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               S   +++ G G   +LGHG++     P  +      N   +  A G      +   
Sbjct: 448 GSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQL--ACGHNMTVALTTS 505

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G V T G   YG LG+ + +   +P +VQ  L       ++ G Y T V++   +V+S+G
Sbjct: 506 GHVFTMGGTAYGQLGNPSSDG-VIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 564

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            G +  LGH  + D +         P L+ +LK
Sbjct: 565 RGSNGRLGHGDVEDRKA--------PTLIEALK 589



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 28/272 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +Y+FG  + G LGHG  E    PR ++ L G+R I+ A G   T  I
Sbjct: 381 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 440

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          + +++ +G        +G + T L+  P  V SL +    Q A G+  
Sbjct: 441 VEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL--PTCVSSLIDYNFHQLACGHNM 498

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG+ +  + V P  +   L    V +I+ G  + + L   
Sbjct: 499 TVALTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLT-- 555

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
            S   V+S G G  G+LGHG   D K P LIE  +  +++ +       A+   H  V G
Sbjct: 556 -SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 614

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECES 300
            D  VCT       +   R+ C   G   C S
Sbjct: 615 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHS 646


>gi|408500850|ref|YP_006864769.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465674|gb|AFU71203.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1184

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 44/332 (13%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAAGAGRTM 108
            G+S+AV S G  Y++G+N  GQLG+GTT ++  P P+    G  +    +QAAAG   ++
Sbjct: 690  GYSLAVGSDGKAYAWGNNKYGQLGNGTTTQQSTPVPVPKPAGTPMDFTYMQAAAGGHHSL 749

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVL 164
             I   G VYA+G +  G  + G       ++P  V    N    +  +Q + G + +  L
Sbjct: 750  AIGSDGYVYAWGNNDHG--QLGNNTKSNSSTPVRVHGPNNFGEGLKAIQVSAGVWSSTAL 807

Query: 165  SREGRVYTFSWGNDARLGHHTE------PNDV-EPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +G VYT  WG+     +HTE      P  V +P    G       VQI+  + + +AL
Sbjct: 808  GADGTVYT--WGSLQSGWNHTESSPQTVPTTVKDPSDASGVFH---AVQISTHWSFDMAL 862

Query: 218  ACQPSGMAVYSVGCGLGGKLGH----GSRTDEKHP---RLIEQFQLLN-----LQPVVVA 265
                    VY+ G    G+LG+    G+ T   HP   R+    Q        L+ V V+
Sbjct: 863  GQD---GYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLKAVQVS 919

Query: 266  AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALND---VKAIHVAT 318
            AG  HA  +G+DG   +WG    G LG+G    E+V    P  VQ   +   V A+ V+ 
Sbjct: 920  AGVLHALAIGEDGNTWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTVTAVQVSA 979

Query: 319  GDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            G Y + VV  DG+ +S+G      LG N+ +D
Sbjct: 980  GSYLSLVVDTDGNTWSWGWNSYGKLGDNSTSD 1011



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 102
            QA AG  HS+A+ S G VY++G+N  GQLG+ T      P     P    +G++ IQ +A
Sbjct: 740  QAAAGGHHSLAIGSDGYVYAWGNNDHGQLGNNTKSNSSTPVRVHGPNNFGEGLKAIQVSA 799

Query: 103  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFT 161
            G   +  +   G VY +G    G          + T+ +       +F  VQ +    F 
Sbjct: 800  GVWSSTALGADGTVYTWGSLQSGWNHTESSPQTVPTTVKDPSDASGVFHAVQISTHWSFD 859

Query: 162  AVLSREGRVYTFSWGNDARLGHH----TEPNDVEPHP--LLGTLEN-------IPVVQIA 208
              L ++G VYT+ +  + +LG++    T      P P  +  + ++       +  VQ++
Sbjct: 860  MALGQDGYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLKAVQVS 919

Query: 209  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHP---RLIEQFQLLNLQPVV 263
            AG  + LA+    +    +S G    G+LG+G+ T E   +P   R+        +  V 
Sbjct: 920  AGVLHALAIGEDGN---TWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTVTAVQ 976

Query: 264  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--------VKAIH 315
            V+AG++ + VV  DG   +WGW  YG LG  +    ++P  V A           + A  
Sbjct: 977  VSAGSYLSLVVDTDGNTWSWGWNSYGKLGDNSTSDRTIPGKVFASAQSTSSAGPWLNAAQ 1036

Query: 316  VATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            ++ G Y +  +  DG   ++G      LG+
Sbjct: 1037 ISAG-YFSSAIGTDGYAKAWGRNNYGQLGN 1065


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 174/369 (47%), Gaps = 53/369 (14%)

Query: 84  WRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD--------SFGEAEYGVQG 133
           ++P P  I  L+   I Q A G G T+ +   G VY++G          S  +    V+G
Sbjct: 10  FQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69

Query: 134 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPND- 189
                +P+++E L+++ V+Q A G+  T  L+++G++Y++  G   +LGH      P D 
Sbjct: 70  YPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDE 129

Query: 190 ----VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 243
                +P P L+  L+N+ V Q+A G  + +A+    +   +YS G G  G+LGH   + 
Sbjct: 130 DGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVL---NNGHLYSWGAGACGQLGHPDTSS 186

Query: 244 ---DEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
              DE        PR +   +   L  +  + G  H  V+   G +  +G G  G LG G
Sbjct: 187 FPADEDGYPYQPIPRCVTALKPFKL--IHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFG 244

Query: 295 N--------EECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           N        + C    VPK +++L  +  + ++ GD  +  +S +G VY++G      LG
Sbjct: 245 NISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLG 304

Query: 345 HNAIADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
            + I D   N         PQ V +L  +N+++V IS   +     HT ALTE G LY+F
Sbjct: 305 LDDIRDLPKNTDNKPYQPFPQKVVAL--MNKKIVAISCGET-----HTLALTEGGHLYSF 357

Query: 403 GAGDKGQLG 411
           G    GQLG
Sbjct: 358 GGNTCGQLG 366



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 52/346 (15%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPRPIRSLQGIR 96
           Q   G GH++AV  KG VYS+G+++ GQLG  + ++          +  PR I  LQ ++
Sbjct: 27  QVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVK 86

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY--------GVQGTKLVTSPQLVESLKN 148
           +IQ A G   T+ ++  G++Y++G    G+  +           G      P+L+  LKN
Sbjct: 87  VIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKN 146

Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPNDVEPHPL------LGTL 199
           + V Q A G   T  +   G +Y++  G   +LGH    + P D + +P       +  L
Sbjct: 147 LEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTAL 206

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----------PR 249
           +   ++  + G  + + L  Q     +Y  G G  G+LG G+ +              P+
Sbjct: 207 KPFKLIHASCGDVHTMVLTDQGE---IYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPK 263

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG----------HGNEECE 299
            IE  Q + +  V ++ G  H+  + ++G V  WG   YG LG            N+  +
Sbjct: 264 KIESLQGIFI--VSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             P+ V AL + K + ++ G+  T  ++E G +YSFG      LG 
Sbjct: 322 PFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ 367



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 34/232 (14%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPRPIRSLQ 93
           E  Q   G  H++AV + G +YS+G+ + GQLGH  T            +  PR + +L+
Sbjct: 148 EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALK 207

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVES 145
             ++I A+ G   TM+++D G++Y FG  S G+  +G        V     +  P+ +ES
Sbjct: 208 PFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIES 267

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---------NDAR-LGHHTEPNDVEPHP- 194
           L+ IF+V  + G+  +  LSREG VY  +WG         +D R L  +T+    +P P 
Sbjct: 268 LQGIFIVSLSCGDSHSMALSREGHVY--AWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQ 325

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            +  L N  +V I+ G  + LAL     G  +YS G    G+LG   +  EK
Sbjct: 326 KVVALMNKKIVAISCGETHTLALT---EGGHLYSFGGNTCGQLGQYVKELEK 374



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 152/330 (46%), Gaps = 52/330 (15%)

Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG---HHTE 186
           +G      P  ++ L+N  + Q A G+  T  +  +G VY  SWG  A  +LG       
Sbjct: 6   EGYPFQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVY--SWGASACGQLGLASMKDL 63

Query: 187 PNDVEPHP------LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           P DVE +P      ++  L+++ V+QIA G  + +AL        +YS G G  G+LGH 
Sbjct: 64  PTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALT---QDGKLYSWGGGGCGQLGHP 120

Query: 241 SRT----DEK------HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
             +    DE        P+LI    L NL+   VA G  H   V  +G + +WG G  G 
Sbjct: 121 DTSAMPKDEDGCPYQPKPKLI--VVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQ 178

Query: 291 LGHGNEEC----------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           LGH +             + +P+ V AL   K IH + GD  T V+++ G++Y FG G  
Sbjct: 179 LGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSC 238

Query: 341 ASLGHNAIADGQGNRHANVL--TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
             LG   I+    +  +      P+ + SL+ +   +V +S  +S     H+ AL+  G 
Sbjct: 239 GQLGFGNISQMPLDVDSCPFMPVPKKIESLQGI--FIVSLSCGDS-----HSMALSREGH 291

Query: 399 LYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           +YA+G    GQLG++ +     R  P+  D
Sbjct: 292 VYAWGEATYGQLGLDDI-----RDLPKNTD 316


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 173/355 (48%), Gaps = 27/355 (7%)

Query: 61   KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            +  VY +G N   QLG     +   P     L  ++ I  A G+    ++S  G++YA G
Sbjct: 2588 QSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 2647

Query: 121  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 178
            + + G    G+     V  P+ +  L    + + A+  G      L+++G+V+++  G D
Sbjct: 2648 EGTNGR--LGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 2705

Query: 179  ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
             +LGH    +  +P  L+  L++  +  IA G  +  A+A   S   +Y+ G G  G+LG
Sbjct: 2706 GKLGHGNCISLDKPK-LIEILKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLG 2761

Query: 239  HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE 296
            HG    +  P+L++   L+  + V VA G+  A  +    DG V +WG G +G LG G  
Sbjct: 2762 HGDTITQTRPKLVQA--LVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 2819

Query: 297  ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
            +    P  V  LN +  I V  G   +  +++ G+V+++G G+   LGH       GN H
Sbjct: 2820 DGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH 2872

Query: 357  ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +V  P LV  L+   ++++ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2873 -HVRKPTLVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 2919



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 17/341 (4%)

Query: 49   IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 105
            IAG   ++ + S+ G +Y+ G  ++G+LG G       P+ I  L    I + A  +G  
Sbjct: 2627 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGK 2686

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              + ++  G+V+++G+   G+  +G      +  P+L+E LK+  +   A G+  +A ++
Sbjct: 2687 HALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEILKSKRIRDIACGSGHSAAIA 2744

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
              G +YT+  G   RLGH        P  L+  L    VVQ+A G      +A    G  
Sbjct: 2745 SNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALVGQRVVQVACGSRDAQTMALTTDG-C 2802

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            VYS G G  GKLG G       P  +++   L +  + V  GA  +  + + G V TWG 
Sbjct: 2803 VYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGV--IQVECGAQFSLALTKYGEVWTWGK 2860

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY++G  +    G+
Sbjct: 2861 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2920

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             A +    NR      P LV  L+      V    ++SI W
Sbjct: 2921 GATS---VNRK-----PSLVHDLEDARVNRVSCGSSHSIAW 2953



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 34/341 (9%)

Query: 74  QLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 133
           + G+G+T     P     + G+ I Q        M++S  G  Y     S  E +Y ++ 
Sbjct: 87  KFGNGST-----PFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMYHGS--ETQYPLRV 139

Query: 134 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
                 P          +   A G  + A L+++G VY++  G+  RLGH    +  EP 
Sbjct: 140 HGFSDKPI-------TMIASHADGKHYLA-LTQDGCVYSWGNGDGGRLGHGDTVSYDEPK 191

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            L+ +L +  +V IA G  Y  AL+   SG  +Y+ G G  G+LGHG+  D   P L+  
Sbjct: 192 -LIESLLDKNIVFIACGSTYSAALSA--SG-ELYTWGRGNYGRLGHGNFDDVLTPTLVTT 247

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            +   +  V   +G      V   G V +WG G YG LG G  +    PK+V  L D+  
Sbjct: 248 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 307

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           + V  G   +  ++  G+VY++G G++  LGH +          +V  P+++ SL+  ++
Sbjct: 308 VKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGS--------EEHVRYPKVIESLR--DK 357

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
           ++  +S+  +     H  ALTE   +Y +G  D GQ+   L
Sbjct: 358 KIKDLSVGTT-----HILALTEDQFVYGWGRNDYGQIDPTL 393



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 10/273 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T  G VYS+G+   G+LGHG T     P+ I SL    I+  A G+  +  +S +
Sbjct: 158 HYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSAS 217

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G+ ++G   +G      V +P LV +LK   VV  A G+  +  L        F
Sbjct: 218 GELYTWGRGNYGRLGHG--NFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 275

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+    +LG         P  ++  L +I VV++  G  +  AL        VY+ G 
Sbjct: 276 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGGQFSAALTAHGE---VYTWGK 331

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G   +LGHGS    ++P++IE  +   ++ + V  G  H   + +D  V  WG   YG +
Sbjct: 332 GDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSV--GTTHILALTEDQFVYGWGRNDYGQI 389

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                   S P +   L+    I +A+G   +F
Sbjct: 390 DPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSF 422



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 43/300 (14%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V A+G   FG            ++P   + +  + + Q         +LS  G  Y   
Sbjct: 79  EVLAWGGVKFGNG----------STPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMY 128

Query: 175 WGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            G++ +            +PL +    + P+  IA+       LA    G  VYS G G 
Sbjct: 129 HGSETQ------------YPLRVHGFSDKPITMIASHADGKHYLALTQDG-CVYSWGNGD 175

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           GG+LGHG       P+LIE   LL+   V +A G+ ++A +   G + TWG G YG LGH
Sbjct: 176 GGRLGHGDTVSYDEPKLIES--LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGH 233

Query: 294 GNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GN +    P +V  L     +HVA  +GD  T  V+  G V+S+G G+   LG     DG
Sbjct: 234 GNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-TDG 292

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    TP++V  L  +N  VV++           + ALT  G++Y +G GD  +LG
Sbjct: 293 SK-------TPKIVDKLLDIN--VVKVFCGGQF-----SAALTAHGEVYTWGKGDAYRLG 338



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 99/169 (58%), Gaps = 5/169 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  +S A+++ G +Y++G  + G+LGHG  ++   P  + +L+G  ++  A G+G  +T+
Sbjct: 207 GSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTL 266

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+++G   +G+   G  GT    +P++V+ L +I VV+   G  F+A L+  G
Sbjct: 267 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHG 324

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            VYT+  G+  RLGH +E +   P  ++ +L +  +  ++ G  ++LAL
Sbjct: 325 EVYTWGKGDAYRLGHGSEEHVRYPK-VIESLRDKKIKDLSVGTTHILAL 372



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 39/281 (13%)

Query: 131  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
            +Q  K++ +PQ  +S     V+   +G+ FT ++  E R  +  +            +D 
Sbjct: 2468 IQSLKIIVNPQ--DSSYMPCVIAVNVGDSFTNLV--EFRTISIRY------------SDT 2511

Query: 191  EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
                L    E  P V+IA   C    + C+  G+ +      +G +    ++       L
Sbjct: 2512 SVTLLQDIKEYYPCVEIAIKQCRNGGIDCKIHGLRI------IGRQNMFENQLTTSVSFL 2565

Query: 251  IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
               +++L  Q  +  +         Q   V  WG      LG        +P   + L+ 
Sbjct: 2566 ASDWEVLQEQVAIQRS----TDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSK 2621

Query: 311  VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
            +K IH+A G  T F+VS++G +Y+ G G +  LG      G  N   NV  P+ +  L Q
Sbjct: 2622 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL-----GDDN---NVCEPKAIPFLSQ 2673

Query: 371  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               + V +          H  ALT+ GK++++G G+ G+LG
Sbjct: 2674 FVIKKVAVHSGGK-----HALALTQDGKVFSWGEGEDGKLG 2709



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ VT+ G+V+S+G    G+LG G T+    P+ +  L  I +++   G   +  
Sbjct: 260 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAA 319

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G+VY +GK       +G +  + V  P+++ESL++  +   ++G      L+ +  
Sbjct: 320 LTAHGEVYTWGKGDAYRLGHGSE--EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQF 377

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           VY +   +  ++     P   EP  L  TL +  V+ +A+G
Sbjct: 378 VYGWGRNDYGQIDPTLGPVVSEP-TLCPTLSSKTVIGLASG 417



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   G   S A+T+ G VY++G   + +LGHG+ E    P+ I SL+  +I   + G   
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTH 368

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            + +++   VY +G++ +G+ +  +    +V+ P L  +L +  V+  A G
Sbjct: 369 ILALTEDQFVYGWGRNDYGQIDPTL--GPVVSEPTLCPTLSSKTVIGLASG 417


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 154/339 (45%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + +   A G     L++  G+V+ +G++S G   +GV   K V  P+LVES
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVES 328

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G +YT+  G  N   LGH  + +   P  + G LE + 
Sbjct: 329 LAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL- 387

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             Q+A+  C     A   S   +++ G G  G LGHG R +  +PR +E   L  L+ + 
Sbjct: 388 --QVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVE--SLSGLRTIA 443

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
            A G WH A V +            G++ TWG G    LGHG++E    P  V AL D  
Sbjct: 444 AACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 503

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G V++ G      LG N  ADG+         P LV   K   
Sbjct: 504 FHKIACGHSLTVGLTTSGHVFAMGSTVYGQLG-NPYADGK--------LPCLVED-KLSG 553

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 554 ESVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 587



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 23/290 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHG     W P+ I   L+G+++     G   T
Sbjct: 340 GEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHT 399

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++  GQ++ FG  +FG   +G +    V  P+ VESL  +  + AA G + TA +   
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGDREN--VAYPREVESLSGLRTIAAACGVWHTAAVVEV 457

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   + 
Sbjct: 458 IVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSLTVG 516

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V+++G  + G+LG+    D K P L+E  +L       +A GA+H AV+  
Sbjct: 517 LTT--SGH-VFAMGSTVYGQLGN-PYADGKLPCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
              V TWG G  G LGHG+ E    P +V+AL D    ++A G +YT  +
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTAAI 621


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG VY++G ++ GQLG   TEE  R PR I+SL  I+I+Q + G   ++ 
Sbjct: 41  GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLA 100

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   +V+++G++ +G+   G +  K  TSPQL++SL  I  +Q A G   + VL+  G 
Sbjct: 101 LSKGSEVFSWGQNKYGQLGLGFEFKK-QTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 159

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG + E +   P+ LL +L +  +V I  G  +  AL  +     V+
Sbjct: 160 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 213

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
           + G G  G+LGH S + E +PR +  F+L+      VA G  H +A V   GR+ ++G G
Sbjct: 214 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 271

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 272 GNGQLGTGSTSNRKSPFTVK 291



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+S+G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 90  QVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGA 149

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 207

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V Q+A G  +  A    PS   
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 264

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 265 IYSFGLGGNGQLGTGSTSNRKSP 287



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 131/260 (50%), Gaps = 13/260 (5%)

Query: 89  IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLK 147
           + +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT+  +  P+ ++SL 
Sbjct: 27  VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQL--GLPGTEECIRVPRNIKSLS 84

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVV 205
           +I +VQ + G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP +
Sbjct: 85  DIQIVQVSCGYYHSLALSKGSEV--FSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFM 142

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           QIAAG  +   L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 143 QIAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 197

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 324
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 198 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 257

Query: 325 VVSEDGDVYSFGCGESASLG 344
            V   G +YSFG G +  LG
Sbjct: 258 FVPSSGRIYSFGLGGNGQLG 277



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 26/279 (9%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           +V  + G+  T  L+ +G+VY +    D +LG       +     + +L +I +VQ++ G
Sbjct: 35  IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAW 269
           Y + LAL+    G  V+S G    G+LG G    ++  P+LI+   LL +  + +AAG  
Sbjct: 95  YYHSLALS---KGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS--LLGIPFMQIAAGGA 149

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 209

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G V++FG G    LGHN+ +     R    L   +VT +    +               H
Sbjct: 210 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------H 254

Query: 390 TFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 423
           T A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 255 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 293



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 203 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 260

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 261 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 292


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  116 bits (290), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 105/376 (27%), Positives = 182/376 (48%), Gaps = 40/376 (10%)

Query: 59  TSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLISDAGQ 115
           TS+G++ ++GS S+ +LG    ++E+ +P P R  +     I   ++G+  +  +++ G 
Sbjct: 596 TSRGLM-TWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGD 654

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           VY +G+ S       V G   +     P  +ESL +I VV  +IG + +A +   G + T
Sbjct: 655 VYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV--SIGFYHSAAVRANGELLT 712

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +  G + +LGH    N VEP  ++ +L +  + Q+  G  + +   C      VY+ G  
Sbjct: 713 WGVGEEGQLGHGDTQNQVEPK-VIQSLTSFWITQVQCGEKHTI---CLTKNGKVYTWGSS 768

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G  T    P  +   +  N+  + +A+G+ H AV+     V  +G G      
Sbjct: 769 EYGQLGLGDTTRYCKPMPVTALEKYNV--LQIASGSTHCAVLTNSKEVLVFGNGA----A 822

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G     S+P +V +L  +    +  G Y+T  +SE GDVY++G G+   LGH       
Sbjct: 823 MGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQE--LGH------- 873

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           GN      TP+LV +L+  N+ + QIS         HT  LT+SG+++  G    GQLG 
Sbjct: 874 GNNQTES-TPKLVEALR--NQSIRQISCGGR-----HTAFLTDSGRIFTSGKDSFGQLG- 924

Query: 413 ELVNNQTERGNPERVD 428
              +   ++  P++++
Sbjct: 925 ---HQAGDQNKPKKIE 937



 Score =  109 bits (273), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 25/272 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS AV + G + ++G    GQLGHG T+ +  P+ I+SL    I Q   G   T+ ++  
Sbjct: 700 HSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKN 759

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+VY +G   +G  + G+  T     P  V +L+   V+Q A G+   AVL+    V  F
Sbjct: 760 GKVYTWGSSEYG--QLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVF 817

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPSGMAVYSVG-- 230
             GN A +G               ++ +IP +  +  Y ++  L C   S  A+   G  
Sbjct: 818 --GNGAAMG-------------AASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDV 862

Query: 231 --CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
              G G +LGHG+   E  P+L+E  +  +++   ++ G  H A +   GR+ T G   +
Sbjct: 863 YTWGTGQELGHGNNQTESTPKLVEALRNQSIRQ--ISCGGRHTAFLTDSGRIFTSGKDSF 920

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
           G LGH   + ++ PK +++L     I V+ G+
Sbjct: 921 GQLGHQAGD-QNKPKKIESLTKTTFISVSCGE 951



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 21/303 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQ-----LGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           +G  +S A+T  G VY +G  S        LG    E++  P  + SL  I ++  + G 
Sbjct: 641 SGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV--SIGF 698

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  +   G++  +G    G+  +G   T+    P++++SL + ++ Q   G   T  L
Sbjct: 699 YHSAAVRANGELLTWGVGEEGQLGHG--DTQNQVEPKVIQSLTSFWITQVQCGEKHTICL 756

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           ++ G+VYT+      +LG        +P P+   LE   V+QIA+G  +  A+      +
Sbjct: 757 TKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTA-LEKYNVLQIASGSTHC-AVLTNSKEV 814

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+  G  +G      + +    P L+   + L++  +    G +  A + + G V TWG
Sbjct: 815 LVFGNGAAMG------AASIISIPTLVPSLKYLHIDKL--CCGHYSTAAISECGDVYTWG 866

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G+   LGHGN + ES PK+V+AL +     ++ G   T  +++ G +++ G      LG
Sbjct: 867 TGQE--LGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLG 924

Query: 345 HNA 347
           H A
Sbjct: 925 HQA 927



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 13/209 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H+I +T  G VY++GS+  GQLG G T    +P P+ +L+   ++Q A+G+ 
Sbjct: 744 TQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGST 803

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              +++++ +V  FG  +       +    +++ P LV SLK + + +   G++ TA +S
Sbjct: 804 HCAVLTNSKEVLVFGNGA------AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAIS 857

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G VYT  WG    LGH     +  P  L+  L N  + QI+ G  +   L    SG  
Sbjct: 858 ECGDVYT--WGTGQELGHGNNQTESTPK-LVEALRNQSIRQISCGGRHTAFLT--DSGR- 911

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +++ G    G+LGH +  D+  P+ IE  
Sbjct: 912 IFTSGKDSFGQLGHQA-GDQNKPKKIESL 939


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 172/385 (44%), Gaps = 55/385 (14%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V SFG N   QLGH   ++   P  I++L G+RI+ +A G   ++ +++ G VY+FG+  
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
             E + G         P ++ +L +  + + A GNF +  L+  G++Y   WG    +  
Sbjct: 63  --EGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIY--EWGQLHEIDK 118

Query: 184 HTE----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV------------- 226
             +    P+ +     +G    I   Q  + Y      A  P+   +             
Sbjct: 119 SAKGLEAPSGLIEMKGIGFASRI-AEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDA 177

Query: 227 ---------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--------NLQPVVVAAGAW 269
                    +    G GG      +  +   +++++ QL         N Q V ++AG  
Sbjct: 178 EDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWA 237

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           ++A V + G+V TWG+   G LG G+     +P+ V+   +V  + V+ G     V+S+ 
Sbjct: 238 YSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQ 297

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL---KQVNERVVQISLTNSIYW 386
           GD++++G G    LGH  +         + L P+ V +     Q+N++V Q++   +   
Sbjct: 298 GDLFTWGLGVFGQLGHGKL--------KSCLHPKKVLAFSEADQLNQKVRQVACGANF-- 347

Query: 387 NAHTFALTESGKLYAFGAGDKGQLG 411
              T ALT  G+L++FG G+ GQLG
Sbjct: 348 ---TMALTVDGRLWSFGHGEYGQLG 369



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 175/418 (41%), Gaps = 73/418 (17%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS+AVT  G VYSFG    GQLGH        P  I +L   RI + A G   ++ +
Sbjct: 42  GEAHSLAVTEFGDVYSFGRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLAL 101

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D G++Y +G+    E +   +G   + +P  +  +K I           +  LS +   
Sbjct: 102 TDTGKIYEWGQ--LHEIDKSAKG---LEAPSGLIEMKGIGFASRIAEQSLSQYLSGDKAA 156

Query: 171 YTFSWGNDARLGHHTEPND--------------------------------------VEP 192
           Y  +  N + +   +  N+                                      V+ 
Sbjct: 157 YDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQL 216

Query: 193 HPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
            PLL G+++N  VV ++AG+ Y  + A   SG  V++ G    G+LG G R     P+ +
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAY--SAAVTKSG-KVFTWGFNEKGQLGLGDRWFHGLPQQV 273

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + F   N+  V V+ G  H  V+   G + TWG G +G LGHG  +    PK V A ++ 
Sbjct: 274 KFFT--NVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEA 331

Query: 312 -----KAIHVATGDYTTFVVSEDGDVYSFGCGESASLG---HNAIAD---------GQGN 354
                K   VA G   T  ++ DG ++SFG GE   LG    N   D          +  
Sbjct: 332 DQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNERE 391

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            H     PQ V +L  V  +V Q++  +      HT  +TE   +Y++G G  G LG 
Sbjct: 392 AHLQYAVPQQVEALASV--KVKQVTCGH-----LHTIVVTEDNDVYSWGWGASGCLGF 442



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 47/259 (18%)

Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPH 193
           +P LV S+KN  VV  + G  ++A +++ G+V+T+ +    +LG      H  P  V+  
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVK-- 274

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
                  N+ +V ++ G  ++  ++ Q     +++ G G+ G+LGHG      HP+ +  
Sbjct: 275 ----FFTNVHIVSVSCGRQHIGVISDQGD---LFTWGLGVFGQLGHGKLKSCLHPKKVLA 327

Query: 254 F---QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----------- 299
           F     LN +   VA GA     +  DGR+ ++G G YG LG   EE +           
Sbjct: 328 FSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLG-ATEENQYRDWNRGGNGN 386

Query: 300 ----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
                     +VP+ V+AL  VK   V  G   T VV+ED DVYS+G G S  LG     
Sbjct: 387 GNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGF---- 442

Query: 350 DGQGNRHANVLTPQLVTSL 368
              G+R    L PQ V +L
Sbjct: 443 ---GDRKFQ-LVPQRVPAL 457



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 32/275 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P  + S++  +++  +AG   +  ++ +G+V+ +G +  G+   G+        PQ V+ 
Sbjct: 218 PLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQ--LGLGDRWFHGLPQQVKF 275

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE----N 201
             N+ +V  + G     V+S +G ++T+  G   +LGH    + + P  +L   E    N
Sbjct: 276 FTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLN 335

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
             V Q+A G  + +AL        ++S G G  G+LG       +               
Sbjct: 336 QKVRQVACGANFTMALTVDGR---LWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREA 392

Query: 248 ------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
                 P+ +E   L +++   V  G  H  VV +D  V +WGWG  GCLG G+ + + V
Sbjct: 393 HLQYAVPQQVEA--LASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLV 450

Query: 302 PKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSF 335
           P+ V AL+      ++ G+  + VV S D   ++F
Sbjct: 451 PQRVPALSGEIVSSISAGEKHSLVVRSTDTTTFAF 485



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 105/257 (40%), Gaps = 44/257 (17%)

Query: 28  KLVLRFLLAGEACCRRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
           K+V R  L        +N Q +   AG  +S AVT  G V+++G N  GQLG G      
Sbjct: 209 KIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHG 268

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            P+ ++    + I+  + G     +ISD G ++ +G   FG+  +G    K    P+ V 
Sbjct: 269 LPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHG--KLKSCLHPKKVL 326

Query: 145 SLK-----NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE------------- 186
           +       N  V Q A G  FT  L+ +GR+++F  G   +LG   E             
Sbjct: 327 AFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGN 386

Query: 187 ------------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
                       P  VE       L ++ V Q+  G+ + + +        VYS G G  
Sbjct: 387 GNEREAHLQYAVPQQVE------ALASVKVKQVTCGHLHTIVVT---EDNDVYSWGWGAS 437

Query: 235 GKLGHGSRTDEKHPRLI 251
           G LG G R  +  P+ +
Sbjct: 438 GCLGFGDRKFQLVPQRV 454



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V ++G  +   LGH  E+    P V+Q L+ ++ +  A G+  +  V+E GDVYSFG G 
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH            N   P ++T+L   +ER+ +++       N H+ ALT++GK+
Sbjct: 63  EGQLGH--------PEKYNTAHPNVITAL--AHERITRVACG-----NFHSLALTDTGKI 107

Query: 400 YAFG---AGDKGQLGIE 413
           Y +G     DK   G+E
Sbjct: 108 YEWGQLHEIDKSAKGLE 124



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           M+V S G     +LGH    D   P +I+   L  ++ V+ A G  H+  V + G V ++
Sbjct: 1   MSVISFGVNKQSQLGHALEKDHLDPSVIQN--LSGMRIVMSACGEAHSLAVTEFGDVYSF 58

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G GR G LGH  +   + P V+ AL   +   VA G++ +  +++ G +Y +G
Sbjct: 59  GRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWG 111


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 158/336 (47%), Gaps = 44/336 (13%)

Query: 45  NSQAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           NS ++A  G  +AV S+ G +Y +G NS GQLG G   +   PR +++LQG  +   A  
Sbjct: 112 NSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVKALQGKIVKVVACA 171

Query: 104 AGRTMLISDAGQVYAFGKDSFGE-----------AEYGVQGTK----------------L 136
              T+   D G  YA+G    G            A  GV                    L
Sbjct: 172 QEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPTKGARTEPLASACL 231

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVL----SREGRVYTFSWGNDARLGHHTEPNDVEP 192
           V +P+++ESL   F+   A G + TA L      +  ++T   G + RLGH  E +   P
Sbjct: 232 VCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHLP 291

Query: 193 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLI 251
            P+   LEN+ +  IA G  +    AC  SG  +Y  G    GKLG GS R  +  P+ +
Sbjct: 292 TPVH-ALENLNITAIACGAHHT---ACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHV 347

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALN 309
               L N   V VA G+ H+A V  DG + TWG GR   LGH    E  E +P+ V+AL 
Sbjct: 348 GG-PLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEFLPRRVEALV 404

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            +  IHV  GD  T  + E+G+V+++G   S  LGH
Sbjct: 405 GLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGH 438



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 164/370 (44%), Gaps = 52/370 (14%)

Query: 66  SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           SF ++ S  +   T+ E   PR + +L+GI     AAG  +  ++S +G++Y +G +S  
Sbjct: 82  SFSASPSLAVFAETSLESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNS-- 139

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH- 184
           E + G    +  + P++V++L+   V   A     T     +G  Y +    + RLG H 
Sbjct: 140 EGQLGTGDRRDASVPRVVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHG 199

Query: 185 ------------------TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC------- 219
                             T+    EP      +    V++   GY ++  +AC       
Sbjct: 200 LSIPSSAGLGVSAPPGAPTKGARTEPLASACLVCTPRVLESLCGY-FITDVACGIYHTAF 258

Query: 220 ----QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
               +    ++++ G GL G+LGHG   D   P  +   + LN+    +A GA H A V 
Sbjct: 259 LGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHLPTPVHALENLNI--TAIACGAHHTACVT 316

Query: 276 QDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVY 333
             G +  WG   +G LG G+    + +PK V   L +   + VA G   +  V+ DG++Y
Sbjct: 317 SGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELY 376

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G G    LGH      QG   ++   P+ V       E +V + + + +  +AHT  +
Sbjct: 377 TWGQGRR--LGHEV----QG--ESDEFLPRRV-------EALVGLFVIHVVCGDAHTACI 421

Query: 394 TESGKLYAFG 403
            E+G ++A+G
Sbjct: 422 VENGNVWAWG 431



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 55/324 (16%)

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           +SP+LV++LK I     A G    AV+S+ G +Y +   ++ +LG     +   P  ++ 
Sbjct: 100 SSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPR-VVK 158

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------- 238
            L+   +V++ A  C      C     + Y+ GC L G+LG                   
Sbjct: 159 ALQGK-IVKVVA--CAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPG 215

Query: 239 ---HGSRTDEKH-------PRLIEQFQLLNLQPVVVAAGAWHAAVVG----QDGRVCTWG 284
               G+RT+          PR++E   L       VA G +H A +G        + T G
Sbjct: 216 APTKGARTEPLASACLVCTPRVLES--LCGYFITDVACGIYHTAFLGVYEQHKTSLFTCG 273

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G LGHG+EE   +P  V AL ++    +A G + T  V+  G +Y +G      LG
Sbjct: 274 LGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLYMWGGAAFGKLG 333

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +       R + +L   +   L+  N+ VV ++L +      H+  +T  G+LY +G 
Sbjct: 334 LGS------TRGSQLLPKHVGGPLR--NKTVVSVALGSQ-----HSACVTTDGELYTWGQ 380

Query: 405 GDKGQLGIELVNNQTERGNPERVD 428
           G +  LG E V  +++   P RV+
Sbjct: 381 GRR--LGHE-VQGESDEFLPRRVE 401



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 16/184 (8%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPI-RSLQGIRIIQAA 101
           N  AIA G  H+  VTS G +Y +G  + G+LG G+T   +  P+ +   L+   ++  A
Sbjct: 301 NITAIACGAHHTACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVA 360

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G+  +  ++  G++Y +G+       + VQG      P+ VE+L  +FV+    G+  T
Sbjct: 361 LGSQHSACVTTDGELYTWGQGR--RLGHEVQGESDEFLPRRVEALVGLFVIHVVCGDAHT 418

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP----LLGTLENIPVVQIAAGYCYLLAL 217
           A +   G V+  +WG    LGH     D+E  P     L  L    VVQ++    +  A 
Sbjct: 419 ACIVENGNVW--AWGTSRILGH----GDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAAF 472

Query: 218 ACQP 221
            C P
Sbjct: 473 -CDP 475


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  115 bits (289), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 75/355 (21%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---GIRIIQAAAGAGRT 107
           G  H+  +T KG +Y++G    G+LGHGT E    PR +   +    +R++  A G   T
Sbjct: 169 GAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHT 228

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV--------------------ESLK 147
           + ++  G VY+FG +   +   G   +   ++PQLV                     S  
Sbjct: 229 VALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTS 288

Query: 148 NIF-------------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
            +F             +++ +     +A +S+ G +YT+  G++ RLGH        P  
Sbjct: 289 TLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQ 348

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQ 253
           ++ +L    +V ++ G  + +AL  +     V+S G G  G+LGHG+ T ++  P+ I+ 
Sbjct: 349 VM-SLHGHTIVDMSLGGGHSMALTKRGE---VFSWGRGENGQLGHGTFTSQQMTPKQIQA 404

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
           FQ  N    V++AG +H+  +  +G +  WG G YG LG        V   + +L D+ +
Sbjct: 405 FQ--NKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLG--------VSSSLDSLGDINS 454

Query: 314 ------------------------IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
                                   I+V++G       +E+GD+YS+GCG    LG
Sbjct: 455 PVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLG 509



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 52/365 (14%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVV 152
           +++  + GA  T +I+D G +Y +G    G+  +G    +  + P+LVE  +   ++ VV
Sbjct: 162 KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGT--LESYSEPRLVEFFETKPSLRVV 219

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---------------- 196
             A G   T  L+  G VY+F   +  +LG     +     P L                
Sbjct: 220 SVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSS 279

Query: 197 --------GTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGCGLGGKLGHGS 241
                    TL N    Q +     ++ L+C  +  A       +Y+ G G  G+LGHG 
Sbjct: 280 PIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGD 339

Query: 242 RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
              +  P+   Q   L+   +V ++ G  H+  + + G V +WG G  G LGHG    + 
Sbjct: 340 SLMQSTPK---QVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQ 396

Query: 301 V-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           + PK +QA  +     ++ G Y +  +  +G ++++G G+   LG ++  D  G+ ++ V
Sbjct: 397 MTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSPV 456

Query: 360 LTP------QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
           L            S     ER + +S         H  A TE+G LY++G G   +LG+ 
Sbjct: 457 LIKSLNNSNGSNNSNSSAGERFINVSSGFQ-----HNVAQTENGDLYSWGCGSGNRLGLA 511

Query: 414 LVNNQ 418
              NQ
Sbjct: 512 NEENQ 516



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 55/328 (16%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGI-------------- 95
           G  H++A+T  G VYSFG N S QLG G     +   P + + Q                
Sbjct: 224 GGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIM 283

Query: 96  --------------------RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
                               RII+ +    R+  IS  G +Y +G+   G   +G   + 
Sbjct: 284 SNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHG--DSL 341

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           + ++P+ V SL    +V  ++G   +  L++ G V+++  G + +LGH T  +       
Sbjct: 342 MQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQ 401

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLI 251
           +   +N  +  I+AG  + +A+    S   +++ G G  G LG  S  D       P LI
Sbjct: 402 IQAFQNKTIKVISAGGYHSIAIDTNGS---MFAWGRGDYGVLGVSSSLDSLGDINSPVLI 458

Query: 252 EQFQLLNLQP----------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           +     N             + V++G  H     ++G + +WG G    LG  NEE + +
Sbjct: 459 KSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLI 518

Query: 302 PKVVQ-ALNDVKAIHVATGDYTTFVVSE 328
           PK +    N+ K    + G+  T +V +
Sbjct: 519 PKKLNDRSNNSKPAFFSCGEIITIIVEK 546



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 35/189 (18%)

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-- 309
           E+   L  + V ++ GA H +++   G + TWG G  G LGHG  E  S P++V+     
Sbjct: 154 ERIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETK 213

Query: 310 -DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT-- 366
             ++ + VA G   T  ++  G+VYSFG  +S  LG   I+    +      TPQLVT  
Sbjct: 214 PSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYS------TPQLVTFQ 267

Query: 367 ----SLKQVNERVVQISLTNSIYWNAH--------------------TFALTESGKLYAF 402
                    +   + +S + S  +N                      + A+++ G LY +
Sbjct: 268 SPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTW 327

Query: 403 GAGDKGQLG 411
           G GD G+LG
Sbjct: 328 GRGDNGRLG 336


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 151/327 (46%), Gaps = 38/327 (11%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q A G+    L +  G+V+ +G++  G   +G      +  P+LVESL    V   A G 
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVESLAVSNVEYIACGE 286

Query: 159 FFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           F T V++  G +Y   WG    N   LGH T  +   P  + G LE + V+ +A G  + 
Sbjct: 287 FHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 344

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
              A   S   +++ G G  G LGHG R    +P+ +E   L   + + VA G WH+A +
Sbjct: 345 ---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRAMKVACGVWHSAAI 399

Query: 275 ----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
                         ++ TWG G    LGHG++E + VP  VQAL D     VA G   T 
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTV 459

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            ++  G V++ G   +  LG N  ADG+         P +V   K  NE V +IS  ++ 
Sbjct: 460 ALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLGNELVEEISCGSN- 508

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLG 411
               H  ALT   ++Y +G G  G+LG
Sbjct: 509 ----HVAALTSRSEVYTWGMGANGRLG 531



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+  VT+ G +Y +G  S  +G LGHGT    W P+ +   L+G++++  
Sbjct: 278 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 337

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G+  + L   +G+++ FG  +FG   +G + +  V  P+ VE+L     ++ A G + 
Sbjct: 338 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 395

Query: 161 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           +A +          +   +++T+  G+  RLGH  +   + P   +  L +    Q+A G
Sbjct: 396 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 454

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           +   +ALA   +   V+++G    G+LG+  + D K P ++ Q +L N     ++ G+ H
Sbjct: 455 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 509

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            A +     V TWG G  G LGHG+ E +  P +V AL D     ++ G ++TT +
Sbjct: 510 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 565



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 38/285 (13%)

Query: 143 VESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGT 198
           +ESL +++V   Q A G+    + +R+G V+T  WG +   RLGH T+ +   P  L+ +
Sbjct: 217 IESLGDVYVWGEQIACGSRHIGLTTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVES 273

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQL 256
           L    V  IA G  +   +    SG  +Y  G G    G LGHG+      P+ +    L
Sbjct: 274 LAVSNVEYIACGEFHTCVVTA--SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PL 329

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
             LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+  +A+ V
Sbjct: 330 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 389

Query: 317 ATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
           A G + +  + E             ++++G G+   LGH       G++ A  L P  V 
Sbjct: 390 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQ 441

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +L  V+    Q++  +S+     T AL  SG ++  G+ + GQLG
Sbjct: 442 AL--VDHNFHQVACGHSM-----TVALATSGHVFTMGSSNNGQLG 479


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 153/342 (44%), Gaps = 40/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+++++G++S G   +GV     V  PQL+E+
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPQLIEA 363

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N  +   A G + T  ++  G +YT  WG    N   LGH  E +   P  + G LE 
Sbjct: 364 LSNTNIEFVACGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 421

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   ++   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 422 IHVSSISCGPWHTAVVS---SAGQLFTFGDGTFGVLGHGDRKSISLPREVE--SLKGLRT 476

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E + VP  V AL 
Sbjct: 477 VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALV 536

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T   +  G VY+ G      LG N  +DG+         P       
Sbjct: 537 EPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLG-NPQSDGK--------LPA------ 581

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +V  ++ + S+        H   LT   ++Y +G G  G+LG
Sbjct: 582 RVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 623



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 40/318 (12%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           +GV+   L+  P+ +ES   + V   A G    A+++++G +  FSWG ++  RLGH  +
Sbjct: 297 FGVKMDSLL--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 352

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            + + P  L+  L N  +  +A G  +  A+      +  +  G    G LGHG+     
Sbjct: 353 SDVLHPQ-LIEALSNTNIEFVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHW 410

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+ V+
Sbjct: 411 VPKRVNG-PLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVE 469

Query: 307 ALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGN 354
           +L  ++ +  A G + T  V E             G ++++G G+   LGH       G+
Sbjct: 470 SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GD 522

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
           + A  L P  V++L + N    Q++  +S+     T A T SG +Y  G+   GQLG   
Sbjct: 523 KEAK-LVPTCVSALVEPN--FCQVACGHSL-----TIARTTSGHVYTMGSPVYGQLG--- 571

Query: 415 VNNQTERGNPERVDIDLS 432
            N Q++   P RV+  LS
Sbjct: 572 -NPQSDGKLPARVEGKLS 588



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 72/346 (20%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q IA G  H+  VT +G ++S+G  S G+LGHG   +   P+ I +L    I   A G  
Sbjct: 318 QNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEY 377

Query: 106 RTMLISDAGQVYAFGKD------------------------------------------- 122
            T  ++ +G +Y +G                                             
Sbjct: 378 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 437

Query: 123 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 164
                  +FG+  +GV G    K ++ P+ VESLK +  VQAA G + TA +        
Sbjct: 438 SSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNS 497

Query: 165 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
                  G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   L +A  
Sbjct: 498 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVSALVEPNFCQVACGHS--LTIART 554

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            SG  VY++G  + G+LG+  ++D K P  +E  +L       +A GA+H AV+     V
Sbjct: 555 TSGH-VYTMGSPVYGQLGN-PQSDGKLPARVEG-KLSRSSVEEIACGAYHVAVLTSKTEV 611

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            TWG G  G LGHG+ + +++P +V+AL D +   +A G   T  +
Sbjct: 612 YTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAI 657



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 130/313 (41%), Gaps = 35/313 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  V+S G +++FG  + G LGHG  +    PR + SL+G+R +QAA G   T  +
Sbjct: 430 GPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAV 489

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV  P  V +L      Q A G+
Sbjct: 490 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVSALVEPNFCQVACGH 547

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T   +  G VYT       +LG+      + P  + G L    V +IA G  ++  L 
Sbjct: 548 SLTIARTTSGHVYTMGSPVYGQLGNPQSDGKL-PARVEGKLSRSSVEEIACGAYHVAVLT 606

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ +       AA   H  V
Sbjct: 607 ---SKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAICLHKWV 663

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+       +   R+ C   G   C S       K   A N  KA  V    Y
Sbjct: 664 SGVDQSMCSGCRLPLNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCY 723

Query: 322 TTFVVSEDGDVYS 334
                + + D  S
Sbjct: 724 NKLRKAMETDASS 736



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 43  RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           R + + IA G  H   +TSK  VY++G  ++G+LGHG T+++  P  + +L+  ++   A
Sbjct: 589 RSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIA 648

Query: 102 AGAGRTMLI 110
            G   T  I
Sbjct: 649 CGTNFTAAI 657


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 132/268 (49%), Gaps = 10/268 (3%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G  YSFG    G+LGHG    E  P+ +  +QG ++ Q   G   ++L++D G VY FG+
Sbjct: 104 GTAYSFGQGEWGKLGHGGAANEQHPKQLE-VQG-KVTQIGVGDQHSVLLTDGGHVYTFGQ 161

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 180
             +G+  +G +  K +  P+ VE+L        +IG  F    +        SWG     
Sbjct: 162 GIYGQLGHGTR--KDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGRQGPW 219

Query: 181 LGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           LGH  +P+ V+    +G L+N   ++Q+AAG  + L L        VYS+G    G LG 
Sbjct: 220 LGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGK---VYSMGKNKDGCLGQ 276

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G    ++    +    L N     VAAG  H+ V+  DG V T+G G  G LGHG+ + +
Sbjct: 277 GKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQ 336

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVS 327
            VP+ VQ + D KA  +A G   T V++
Sbjct: 337 DVPRTVQGVFD-KACAIAAGFEHTIVLT 363



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 153/361 (42%), Gaps = 46/361 (12%)

Query: 37  GEACCRRENSQAIAGPGH----------SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
           G  C   +N +++  P            S+AV S+G  Y +G+  S   G     E   P
Sbjct: 19  GYECYDNKNPRSVNAPSDLISLHAGWNCSVAVNSEGTPYFWGTMPSKYDGKAKFLE---P 75

Query: 87  RPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
            P+ ++  G ++         T    + G  Y+FG+  +G+  +G  G      P+ +E 
Sbjct: 76  SPLPAISIGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGHG--GAANEQHPKQLEV 133

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPV 204
                V Q  +G+  + +L+  G VYTF  G   +LGH T  +   P  +   +     +
Sbjct: 134 QGK--VTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTI 191

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
             I  G+    A+        V+S G   G  LGH ++ D  H +  ++  LL  +  + 
Sbjct: 192 TSIGVGFDQTFAINADG---VVHSWGR-QGPWLGHAAQPD--HVKQPQEVGLLKNKAKIM 245

Query: 264 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGD 320
            VAAG  H  ++  DG+V + G  + GCLG G   ++  + P  + +LN+     VA G+
Sbjct: 246 QVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGE 305

Query: 321 YTTFVVSEDGDVYSFGCGESASLGH-----------------NAIADGQGNRHANVLTPQ 363
             + V++ DG V +FG G +  LGH                  A A   G  H  VLT Q
Sbjct: 306 KHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRTVQGVFDKACAIAAGFEHTIVLTGQ 365

Query: 364 L 364
           L
Sbjct: 366 L 366



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 149/358 (41%), Gaps = 31/358 (8%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V SFG N +GQLG+   + +  PR + +   +  I   AG   ++ ++  G  Y +G   
Sbjct: 7   VVSFGLNFNGQLGYECYDNK-NPRSVNAPSDL--ISLHAGWNCSVAVNSEGTPYFWGT-- 61

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
              ++Y  +   L  SP    S+    +    +    T     +G  Y+F  G   +LGH
Sbjct: 62  -MPSKYDGKAKFLEPSPLPAISI-GFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGH 119

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
               N  E HP    ++   V QI  G  + + L     G  VY+ G G+ G+LGHG+R 
Sbjct: 120 GGAAN--EQHPKQLEVQG-KVTQIGVGDQHSVLLT---DGGHVYTFGQGIYGQLGHGTRK 173

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC-LGHGNE-ECESV 301
           D   P+ +E           +  G      +  DG V +WG  R G  LGH  + +    
Sbjct: 174 DLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWG--RQGPWLGHAAQPDHVKQ 231

Query: 302 PKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           P+ V  L N  K + VA G   T +++ DG VYS G  +   LG       +        
Sbjct: 232 PQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKE------TA 285

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            P  +TSL   N  + Q++         H+  L   G +  FG+G  G+LG     NQ
Sbjct: 286 NPMPITSLN--NYVITQVAAGEK-----HSVVLASDGSVLTFGSGSNGRLGHGDTKNQ 336



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 83/205 (40%), Gaps = 31/205 (15%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWG 284
           V S G    G+LG+    D K+PR +     L    + + AG W+ +V V  +G    WG
Sbjct: 7   VVSFGLNFNGQLGYECY-DNKNPRSVNAPSDL----ISLHAG-WNCSVAVNSEGTPYFWG 60

Query: 285 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
                  G     E   +P +       K  H       T    EDG  YSFG GE   L
Sbjct: 61  TMPSKYDGKAKFLEPSPLPAISIGF---KLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKL 117

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH   A+ Q   H   L         +V  +V QI + +      H+  LT+ G +Y FG
Sbjct: 118 GHGGAANEQ---HPKQL---------EVQGKVTQIGVGDQ-----HSVLLTDGGHVYTFG 160

Query: 404 AGDKGQLGIELVNNQTERGNPERVD 428
            G  GQLG      + +   P+RV+
Sbjct: 161 QGIYGQLGH---GTRKDLDRPKRVE 182


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 27/351 (7%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           +VY +GSNSS QL  GT E+  +P+  +     ++I+A  G   T  +S  G V A GK 
Sbjct: 371 MVYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAVKACGKG 428

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARL 181
           S+G    G    + +    ++E  + +  V ++ G +  T  ++ EG V+++  G+  +L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           GH        P  + G L    VV ++AGY +  A+    +   +Y+ G G  G+LGH  
Sbjct: 489 GHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVT---NDGELYTWGEGDFGRLGHSD 545

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC-TWGWGRYGCLGHGNEECES 300
                 P L++    +      VA G+ H   V QDGR+  ++G G  G LGHG+     
Sbjct: 546 SHSRNVPTLVKDISGVG----QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVY 601

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            PKV++AL+      V  G  ++  ++  G V+++GCG            G G+     L
Sbjct: 602 RPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCL---------GCGSSETTSL 652

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P+L+  L     +++ IS  +S     H  AL+   +++A+G    GQ G
Sbjct: 653 RPRLIEELSIT--KIIDISCGDS-----HCLALSHENEVFAWGNNAMGQCG 696



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 177/346 (51%), Gaps = 27/346 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLQGIRIIQAAAGA-GR 106
           AG   + +V++ G V + G  S G+LG G +  +  P+ +     + +R + ++ G+ G 
Sbjct: 408 AGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH 467

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLS 165
           T+ ++  G+V+++G   +G+  +G   T+    P++++  L    VV  + G   +A ++
Sbjct: 468 TLAVTAEGEVFSWGDGDYGKLGHGNSATQ--KYPKIIQGPLLGKVVVCVSAGYRHSAAVT 525

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGM 224
            +G +YT+  G+  RLGH    +D     +   +++I  V Q+A G  + +A+A    G 
Sbjct: 526 NDGELYTWGEGDFGRLGH----SDSHSRNVPTLVKDISGVGQVACGSSHTIAVA--QDGR 579

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+S G G  GKLGHG       P++IE      ++ V   AG+  +  +   G+V  WG
Sbjct: 580 IVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTSAGQVFAWG 637

Query: 285 WGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G   CLG G+ E  S+ P++++ L+  K I ++ GD     +S + +V+++G       
Sbjct: 638 CG--SCLGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWG------- 688

Query: 344 GHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            +NA+   GQG+    V  P+ V  L+ V+ + +    ++S+ W A
Sbjct: 689 -NNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTA 733



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 148/300 (49%), Gaps = 32/300 (10%)

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D   VY +G +S  +   G    + +  P+L +   +  +++A  G + T  +S +G V
Sbjct: 367 NDTVMVYVWGSNSSHQLAEGT--LEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAV 422

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLL----GTLENIPVVQIAAGYCYLLALACQPSGMAV 226
                G+  RLG     N   P  L+     T+  +   + + G+     LA    G  V
Sbjct: 423 KACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH----TLAVTAEG-EV 477

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +S G G  GKLGHG+   +K+P++I Q  LL    V V+AG  H+A V  DG + TWG G
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKII-QGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEG 536

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGH 345
            +G LGH +    +VP +V+ ++ V    VA G   T  V++DG  V+SFG G++  LGH
Sbjct: 537 DFGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGH 594

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                G  NR   V  P+++ +L     R V     +S+       ALT +G+++A+G G
Sbjct: 595 -----GDTNR---VYRPKVIEALHGFIIRKVCAGSQSSL-------ALTSAGQVFAWGCG 639



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 58/279 (20%)

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV--------QIAAGY-CYLLALA 218
            G+   + WGN    G H +  D       GT  ++P +        Q+  G  C  L   
Sbjct: 3858 GKSEVYLWGN----GRHGQLADA------GTSASVPTLAPSLSQTQQVVCGQNCTFLV-- 3905

Query: 219  CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQD 277
             Q +G  V +VG G  G+LG G+  D   P +I   Q   +  +V + G+  H+  + + 
Sbjct: 3906 -QANG-TVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            G V +WG G YG LGHGN E +  PK ++ L   + + +A G   + VV+ DG +++FG 
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGS 4023

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWN-------- 387
            G+S  LG  +         +N + P+ VT+L    + +R+  I L +++  N        
Sbjct: 4024 GDSGRLGQRST--------SNKMIPERVTALDGHHIGQRL--IGLPDAMLKNHNRPQIIP 4073

Query: 388  --------------AHTFALTESGKLYAFGAGDKGQLGI 412
                           H  AL+ +G +YA+G   + QLG+
Sbjct: 4074 ALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGL 4112



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 16/183 (8%)

Query: 47  QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H+IAV   G +V+SFG   +G+LGHG T   +RP+ I +L G  I +  AG+ 
Sbjct: 563 QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 622

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 163
            ++ ++ AGQV+A+G  S      G  G+   TS  P+L+E L    ++  + G+     
Sbjct: 623 SSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRLIEELSITKIIDISCGDSHCLA 677

Query: 164 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           LS E  V  F+WGN+A +G     HT     +P  ++G LE + + QI AG  + LA   
Sbjct: 678 LSHENEV--FAWGNNA-MGQCGQGHTSTPVTKPKKVIG-LEGVSIQQITAGTSHSLAWTA 733

Query: 220 QPS 222
            P+
Sbjct: 734 VPT 736



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 31/220 (14%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            GHS+A+T  G V+S+G    G+LGHG +E + RP+ I  LQG  ++Q A G   + +++ 
Sbjct: 3955 GHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
             G+++ FG    G         K++  P+ V +L    + Q  IG               
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMI--PERVTALDGHHIGQRLIGL-------------- 4058

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                 DA L +H  P       ++  LE + +  IA G  ++LAL+   +   VY+ GC 
Sbjct: 4059 ----PDAMLKNHNRPQ------IIPALEGVFIEDIAVGCEHILALS---NTGDVYAWGCN 4105

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
               +LG G     K P L+   Q  N++   ++AG  H++
Sbjct: 4106 CEAQLGLGHSNPVKEPILVTTLQGKNIR--QISAGRCHSS 4143



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 51/315 (16%)

Query: 115  QVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            +VY +G    G+ A+ G   +    +P L ++       Q   G   T ++   G V   
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAPSLSQT------QQVVCGQNCTFLVQANGTVLAV 3914

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-CYLLALACQPSGMAVYSVGCG 232
              G+  RLG     +D+    ++  L+   V Q+   Y     +LA   +G  V+S G G
Sbjct: 3915 GEGSYGRLGQGNS-DDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETG-EVFSWGDG 3972

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
              GKLGHG+   ++ P+ IE  Q    + V +A G  H+AVV  DG++ T+G G  G LG
Sbjct: 3973 DYGKLGHGNSERQRRPKQIEGLQ--GEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLG 4030

Query: 293  HGNEECESVP-----------------------------KVVQALNDVKAIHVATGDYTT 323
              +   + +P                             +++ AL  V    +A G    
Sbjct: 4031 QRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHI 4090

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTN 382
              +S  GDVY++GC   A LG           H+N V  P LVT+L+  N R +     +
Sbjct: 4091 LALSNTGDVYAWGCNCEAQLGLG---------HSNPVKEPILVTTLQGKNIRQISAGRCH 4141

Query: 383  SIYWNAHTFALTESG 397
            S  W     +   SG
Sbjct: 4142 SSAWTTPALSTRASG 4156



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 21/158 (13%)

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
            +V  +G V   G G YG LG GN +    P ++ AL       + T    D  +  ++E 
Sbjct: 3904 LVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963

Query: 330  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            G+V+S+G G+   LGH     G   R      P+ +  L+   E VVQ++         H
Sbjct: 3964 GEVFSWGDGDYGKLGH-----GNSERQRR---PKQIEGLQ--GEEVVQLACGFK-----H 4008

Query: 390  TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +  +T  GKL+ FG+GD G+LG    +N+     PERV
Sbjct: 4009 SAVVTADGKLFTFGSGDSGRLGQRSTSNKM---IPERV 4043



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 28/171 (16%)

Query: 44   ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
            E  Q   G  HS  VT+ G +++FGS  SG+LG  +T  +  P  + +L G  I Q   G
Sbjct: 3998 EVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIG 4057

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                ML                         K    PQ++ +L+ +F+   A+G      
Sbjct: 4058 LPDAML-------------------------KNHNRPQIIPALEGVFIEDIAVGCEHILA 4092

Query: 164  LSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            LS  G VY +    +A+LG  H+ P  V+   L+ TL+   + QI+AG C+
Sbjct: 4093 LSNTGDVYAWGCNCEAQLGLGHSNP--VKEPILVTTLQGKNIRQISAGRCH 4141


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 165/357 (46%), Gaps = 41/357 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR + S Q + +   + G     +++  G+V+++GK+  G   + V  +  V  P+++ES
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 251

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 201
           L    V   A G   T  L+  G +  F WG     LG      + +   PH L G LE 
Sbjct: 252 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 309

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + VV++A G  +   ++   S   +++ G G  G LGHG  +    P+ +E  + L ++ 
Sbjct: 310 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 365

Query: 262 VVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
             VA G WH A +             G++ TWG    G LGH ++E + VP  V+AL D 
Sbjct: 366 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 424

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               V+     T  ++  G V++ G  E   LG + + D   +   +V  P     LK  
Sbjct: 425 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD---SSICSVEGP-----LK-- 474

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            E V +IS  +S     H   LT +GK++ +G G +GQLG+    N  +R +P  V+
Sbjct: 475 TEFVREISSGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GNYVDRSSPTLVE 523



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 24/295 (8%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
           +AIA G  H+ A+   G ++ +G  ++S G         +W P  +   L+G+ +++ A 
Sbjct: 258 KAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC 317

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T +IS +GQ++ +G  +FG   +G   T  V  P+ VESLK + V   A G + TA
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRVKAVACGPWHTA 375

Query: 163 VL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
            +          +  G+++T+   +  +LGH  + + + P   +  L +    Q++    
Sbjct: 376 AIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTDSDFAQVSCAKA 434

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 271
             +AL    +G+ V+++G    G+LG   R D+     +E    L  + V  +++G+ H 
Sbjct: 435 LTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEFVREISSGSSHV 488

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           AV+  +G+V TWG G  G LG GN    S P +V+AL D +   +A G   T  V
Sbjct: 489 AVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAV 543



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  ++S G ++++G  + G LGHG T    RP+ + SL+G+R+   A G   T  I
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 377

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          +G+++ +G    G+  +  + +KLV  P  V++L +    Q +     
Sbjct: 378 VEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV--PTCVKALTDSDFAQVSCAKAL 435

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG H   +D     + G L+   V +I++G  ++  L   
Sbjct: 436 TVALTITGVVFTIGSKEHGQLGSH-RLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMN 494

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVG 275
                V++ G G  G+LG G+  D   P L+E  +   +  +        A   H ++ G
Sbjct: 495 GK---VFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 551

Query: 276 QDGRVC-------TWGWGRYGCLGHGNEECES 300
           +D  VC       ++   ++ C   G+  C S
Sbjct: 552 KDQSVCSRCRLSFSFARKKHNCYNCGSMFCNS 583



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 38/298 (12%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
           V+ P+L+ S + + V   + G    A+++++G V  FSWG +   RLGH      + P  
Sbjct: 191 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 247

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 251
           ++ +L    V  IA G  +  ALA   SG  ++  G G   LG       R+     +L 
Sbjct: 248 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 304

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              + +++  V +A G WH A++   G++ T+G G +G LGHG+    + PK V++L  +
Sbjct: 305 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 362

Query: 312 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           +   VA G + T  + E           G ++++G  +   LGH   +D +       L 
Sbjct: 363 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH---SDKESK-----LV 414

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           P  V +L   +    Q+S   ++     T ALT +G ++  G+ + GQLG   +++ +
Sbjct: 415 PTCVKAL--TDSDFAQVSCAKAL-----TVALTITGVVFTIGSKEHGQLGSHRLDDSS 465


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 188/394 (47%), Gaps = 37/394 (9%)

Query: 37   GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLQG 94
            G + C   N    AG   S+A+ + G ++S+G N +GQLG G   +   + P  + +L  
Sbjct: 975  GFSGCGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP 1034

Query: 95   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 153
               I  AAG    + ++  G V+++G +S G+   G  GT    + PQ + ++ N+  + 
Sbjct: 1035 AAKI--AAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI- 1091

Query: 154  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
             A G   +  ++R+G ++++ +    +LG     +   P  +   + N  V  IAAG  Y
Sbjct: 1092 -ACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV-NAISN--VAAIAAGEYY 1147

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
             LAL    S   V+S G    G+LG G   D   P+ +E    +      +AAG  H+  
Sbjct: 1148 SLALTRDGS---VWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNV----AAIAAGEDHSLA 1200

Query: 274  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
            + +DG V +WG    G LG  + +  + P+ V  ++++KAI  A G+  +F +SE+G  +
Sbjct: 1201 LTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGLAW 1258

Query: 334  SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            ++G      LG      G     AN  TPQ V  +  V      + L+   Y   H+ AL
Sbjct: 1259 AWGYNYDGQLGI-----GTSGSLANENTPQKVKVISNV------VGLSGGNY---HSLAL 1304

Query: 394  TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            TE G L+A+G  D GQ+G    +   +R NP +V
Sbjct: 1305 TEDGALWAWGDNDDGQIG----STGGDRKNPVQV 1334



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 43/394 (10%)

Query: 37  GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQG 94
           G + C   N    AG G S+A+ + G V+S+G+N SGQLG G  E +  + P  + +L  
Sbjct: 486 GFSGCGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL 545

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 153
              I  AAG G  + ++  G V+++G++S G+   G  GT    + PQ + ++ N+  + 
Sbjct: 546 AASI--AAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAI- 602

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G   +  L+R+G  +++ +    +LG     +   P  +   L N  VV +AAG  +
Sbjct: 603 -ACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV-NALSN--VVAMAAGDRH 658

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            LAL    S   ++S G    G+LG G       PR +     +    V +AAG  H+  
Sbjct: 659 SLALTLDGS---LWSWGDNTYGQLGLGDNDHRNTPRKVNAISNV----VAIAAGYRHSLA 711

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           + +DG V +WG    G LG G+ +  + P+ V  ++++KAI  A G+  +  +SE+G V+
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISEEGLVW 769

Query: 334 SFGCGESASLG---HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           ++G   S  LG   H ++AD          TPQ V  +      VV +S  +S     H+
Sbjct: 770 AWGYNCSGQLGIGTHGSLADEN--------TPQKVIVIS----NVVGLSAGSS-----HS 812

Query: 391 FALTESGKLYAFGAGDKGQL----GIELVNNQTE 420
            ALTE G L+A+G  + GQ+     IE ++N  +
Sbjct: 813 IALTEDGALWAWGNNEAGQIAAEEAIEYIDNPVQ 846



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 34/363 (9%)

Query: 70   NSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
            + +G    G   + ++ +P  S  G      AAG   ++ +   G ++++G +  G+   
Sbjct: 956  DGTGDFCDGCPGDFFKSQPGFSGCGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGL 1015

Query: 130  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTE 186
            G+  +  V +P  V++L      + A G+     L+ +G V+++ + +D +LG     T 
Sbjct: 1016 GLGQSVNVFTPTKVDALPP--AAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTY 1073

Query: 187  PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
                 P  +   + N  V  IA G  + LA+A   S   ++S G    G+LG G    + 
Sbjct: 1074 STKNRPQKI-NAISN--VAAIACGGSHSLAVARDGS---LWSWGYNYYGQLGLGDNYSKT 1127

Query: 247  HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
             P+ +     +      +AAG +++  + +DG V +WG    G LG G+ E  + P+ V+
Sbjct: 1128 TPQKVNAISNV----AAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE 1183

Query: 307  ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
             L++V AI  A G+  +  ++ DG V+S+G      LG     D   +R+    TPQ VT
Sbjct: 1184 VLSNVAAI--AAGEDHSLALTRDGSVWSWGRNSRGQLG----LDDNDDRN----TPQPVT 1233

Query: 367  SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 426
            ++  +               N+H+FA++E G  +A+G    GQLGI    +      P++
Sbjct: 1234 TISNIKAIAAG---------NSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQK 1284

Query: 427  VDI 429
            V +
Sbjct: 1285 VKV 1287



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 28/315 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S+A+ S G ++++G N  GQLG G  +    P     L  +  I  A G    + 
Sbjct: 124 AGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAI--AGGDYHALA 181

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            + +G+V+A G++  G  + G  G     +P  V  L N+  V  A G FF+  L  +G 
Sbjct: 182 ATQSGEVWAMGRNDHG--QLGFTGDH-ADAPVQVAGLSNVKSV--AAGEFFSLALKNDGT 236

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WGN+  A+LG       V     +  L NI    IAAG  + +ALA   S   V+
Sbjct: 237 VW--AWGNNESAQLGTGIAGEAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGS---VW 289

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G     K P  +     +      +A+G +H+  +  DG +  WG   
Sbjct: 290 AWGANGSGQLGFGDFETPKAPGRVSSLADV----TAIASGWFHSLALTSDGVLWAWGNNG 345

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG      +S+P  V +++   A+  A G   +  ++ DG V+S+G      LG  +
Sbjct: 346 DGRLGTDATSDQSLPAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVES 403

Query: 348 IADGQGNRHANVLTP 362
           +        A+VLTP
Sbjct: 404 LT------PASVLTP 412



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 159/363 (43%), Gaps = 41/363 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAGRTMLIS 111
           HS+A+   G V+ +G N   QLG G       P   P+ S     I+  AAG   ++ ++
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRLFSLALA 133

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
             G ++A+G + +G+   G    +L  +P     L ++  +  A G++     ++ G V+
Sbjct: 134 SDGSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDVAAI--AGGDYHALAATQSGEVW 189

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
                +  +LG   +  D  P  + G L N  V  +AAG  + LAL    +   V++ G 
Sbjct: 190 AMGRNDHGQLGFTGDHADA-PVQVAG-LSN--VKSVAAGEFFSLALKNDGT---VWAWGN 242

Query: 232 GLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               +LG G   +    P  I     +      +AAG  HA  + +DG V  WG    G 
Sbjct: 243 NESAQLGTGIAGEAVATPAPIAVLSNI----TAIAAGRRHAMALAEDGSVWAWGANGSGQ 298

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG G+ E    P  V +L DV AI  A+G + +  ++ DG ++++G      LG +A +D
Sbjct: 299 LGFGDFETPKAPGRVSSLADVTAI--ASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSD 356

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                      P  V+S+         +S         H+ A+   G ++++G    GQL
Sbjct: 357 QS--------LPAQVSSISNA------VSFAGG---QRHSLAIAADGSVWSWGGNAYGQL 399

Query: 411 GIE 413
           G+E
Sbjct: 400 GVE 402



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 36/331 (10%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           AAG G ++ +   G V+++G +  G+   G+     V +P  V++L        A G   
Sbjct: 498 AAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGGH 555

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHP-LLGTLENIPVVQIAAGYCYLLA 216
              L+ +G V+  SWG ++              E  P  +  + N  V  IA G  + LA
Sbjct: 556 ALALASDGSVW--SWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAIACGGSHSLA 611

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           LA   S    +S G    G+LG G    +  PR +     +    V +AAG  H+  +  
Sbjct: 612 LARDGS---FWSWGYNYYGQLGLGDNVSKTTPRKVNALSNV----VAMAAGDRHSLALTL 664

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           DG + +WG   YG LG G+ +  + P+ V A+++V AI  A G   +  ++ DG V+S+G
Sbjct: 665 DGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAI--AAGYRHSLALTRDGSVWSWG 722

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                 LG   + D   N   N  TPQ VT++  +    V          N ++ A++E 
Sbjct: 723 NNTRGQLG---LGD---NDDRN--TPQPVTTISNIKAIAVG---------NNYSIAISEE 765

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           G ++A+G    GQLGI    +  +   P++V
Sbjct: 766 GLVWAWGYNCSGQLGIGTHGSLADENTPQKV 796



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 24/269 (8%)

Query: 45   NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
            N  AIA G  HS+AV   G ++S+G N  GQLG G    +  P+ + ++  +  I  AAG
Sbjct: 1087 NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAI--AAG 1144

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
               ++ ++  G V+++G +S G+   G+   +   +PQ VE L N+  +  A G   +  
Sbjct: 1145 EYYSLALTRDGSVWSWGDNSDGQ--LGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLA 1200

Query: 164  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+R+G V+  SWG ++R  LG     +   P P+  T+ NI    IAAG  +  A++ + 
Sbjct: 1201 LTRDGSVW--SWGRNSRGQLGLDDNDDRNTPQPVT-TISNIKA--IAAGNSHSFAISEE- 1254

Query: 222  SGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
             G+A ++ G    G+LG    GS  +E  P+ ++    +    V ++ G +H+  + +DG
Sbjct: 1255 -GLA-WAWGYNYDGQLGIGTSGSLANENTPQKVKVISNV----VGLSGGNYHSLALTEDG 1308

Query: 279  RVCTWGWGRYGCLGHGNEECESVPKVVQA 307
             +  WG    G +G    + ++  +V Q+
Sbjct: 1309 ALWAWGDNDDGQIGSTGGDRKNPVQVFQS 1337



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 168/397 (42%), Gaps = 54/397 (13%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL---QGIRIIQAAAGAGRTML- 109
           HS+A+ + G V+S+G N+ GQLG  +        P+ +L   +   +     G G   + 
Sbjct: 378 HSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIW 437

Query: 110 ------------------ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
                             +S+ GQ    G D  G+   G  G      P          +
Sbjct: 438 DDDDDGDGFLDESDNCPCVSNPGQEDEDG-DGTGDFCDGCPGDFFKIQPGFSGCGNPNPM 496

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAG 210
           V A  G  F+  L  +G V+  SWGN+          + +       ++ +P+   IAAG
Sbjct: 497 VAAGGG--FSLALKTDGSVW--SWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAG 552

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + LALA   S  +      G  G    G+ + E  P+ I     +      +A G  H
Sbjct: 553 GGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV----AAIACGGSH 608

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  + +DG   +WG+  YG LG G+   ++ P+ V AL++V A+  A GD  +  ++ DG
Sbjct: 609 SLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSNVVAM--AAGDRHSLALTLDG 666

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++S+G      LG   + D   N H N  TP+ V ++      VV I+         H+
Sbjct: 667 SLWSWGDNTYGQLG---LGD---NDHRN--TPRKVNAIS----NVVAIAAGYR-----HS 709

Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            ALT  G ++++G   +GQLG+    +  +R  P+ V
Sbjct: 710 LALTRDGSVWSWGNNTRGQLGL---GDNDDRNTPQPV 743



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 31/230 (13%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  +S+A+T  G V+S+G NS GQLG G  E+   P+ +  L  +  I  AAG   ++ 
Sbjct: 1143 AGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLA 1200

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            ++  G V+++G++S G  + G+       +PQ V ++ NI  +  A GN  +  +S EG 
Sbjct: 1201 LTRDGSVWSWGRNSRG--QLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGL 1256

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIP--------VVQIAAGYCYLLALAC 219
             + + +  D +LG  T           G+L  EN P        VV ++ G  + LAL  
Sbjct: 1257 AWAWGYNYDGQLGIGTS----------GSLANENTPQKVKVISNVVGLSGGNYHSLALT- 1305

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGA 268
                 A+++ G    G++G  +  D K+P ++ +  ++ +L   V A GA
Sbjct: 1306 --EDGALWAWGDNDDGQIGS-TGGDRKNPVQVFQSSEVFHLYLDVDADGA 1352



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 48  AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIAG   H++A T  G V++ G N  GQLG  T +    P  +  L  ++ +  AAG   
Sbjct: 171 AIAGGDYHALAATQSGEVWAMGRNDHGQLGF-TGDHADAPVQVAGLSNVKSV--AAGEFF 227

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ + + G V+A+G +   +   G+ G + V +P  +  L NI  +  A G      L+ 
Sbjct: 228 SLALKNDGTVWAWGNNESAQLGTGIAG-EAVATPAPIAVLSNITAI--AAGRRHAMALAE 284

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMA 225
           +G V+ +      +LG      D E     G + ++  V  IA+G+ + LAL    S   
Sbjct: 285 DGSVWAWGANGSGQLGF----GDFETPKAPGRVSSLADVTAIASGWFHSLALT---SDGV 337

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +++ G    G+LG  + +D+  P  +          V  A G  H+  +  DG V +WG 
Sbjct: 338 LWAWGNNGDGRLGTDATSDQSLPAQVSSIS----NAVSFAGGQRHSLAIAADGSVWSWGG 393

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
             YG LG  +    SV   V  L   +  H+
Sbjct: 394 NAYGQLGVESLTPASVLTPVHTLYSGEDFHL 424



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 39/317 (12%)

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ +   G V+ +G++ + +   G    +L  +P+    + NI  V  A G  F+  L+
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNI--VSVAAGRLFSLALA 133

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            +G ++  +WG +   +LG     N + P    G  +   V  IA G  +  ALA   SG
Sbjct: 134 SDGSLW--AWGGNYYGQLGMGDNDNRLTPSKTPGLSD---VAAIAGGDYH--ALAATQSG 186

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V+++G    G+LG    T +     ++   L N++ V  AAG + +  +  DG V  W
Sbjct: 187 -EVWAMGRNDHGQLGF---TGDHADAPVQVAGLSNVKSV--AAGEFFSLALKNDGTVWAW 240

Query: 284 GWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           G      LG G   E  + P  +  L+++ AI  A G      ++EDG V+++G   S  
Sbjct: 241 GNNESAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAEDGSVWAWGANGSGQ 298

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG       +         P  V+SL  V       ++ +  +   H+ ALT  G L+A+
Sbjct: 299 LGFGDFETPK--------APGRVSSLADV------TAIASGWF---HSLALTSDGVLWAW 341

Query: 403 GAGDKGQLGIELVNNQT 419
           G    G+LG +  ++Q+
Sbjct: 342 GNNGDGRLGTDATSDQS 358



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
           N +P+V A+   H+  +  DG V  WG   Y  LG G++     P+    ++++  + VA
Sbjct: 67  NAEPMV-ASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSNI--VSVA 123

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G   +  ++ DG ++++G      LG           + N LTP     L  V      
Sbjct: 124 AGRLFSLALASDGSLWAWGGNYYGQLGM--------GDNDNRLTPSKTPGLSDV------ 169

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            ++    Y   H  A T+SG+++A G  D GQLG 
Sbjct: 170 AAIAGGDY---HALAATQSGEVWAMGRNDHGQLGF 201


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 170/377 (45%), Gaps = 38/377 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG  H+ ++ S G VYS+G    GQLG GT     R  P+ +     +I   +G   +M
Sbjct: 39  VAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNT--RTTPVMAKNLNHVIDIHSGVRSSM 96

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G V+ +G +  G+   G+     V +P  V  L  I  +   +  +    LS  G
Sbjct: 97  ALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVPGLSGIKAISGGLA-YHGMALSENG 153

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+T+   ++  LG+ T      P  + G  +   V  IAAG  Y LAL    +   V++
Sbjct: 154 TVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGT---VWA 207

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG G+ T+   P      Q+  L  V+ +AAG  H+  + QDG V  WG   
Sbjct: 208 WGVNGSGELGDGTTTERHVP-----VQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNT 262

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LG G     + P  V+ L  + A  VA G Y +  V + G+V+S+G      LG ++
Sbjct: 263 YGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSS 320

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                   +A+ L P  VT ++ V E    IS         H+ A+ + G ++ +G    
Sbjct: 321 --------NASSLIPVPVTGIEHVRE----ISAG-----GFHSVAMKKDGTVWGWGYNSG 363

Query: 408 GQLGIELVNNQTERGNP 424
           GQLG    NN   RG P
Sbjct: 364 GQLGDGTYNN--TRGIP 378



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           + AG +H A +   G V +WG+G  G LG G     + P + + LN V  IH  +G  ++
Sbjct: 38  LVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             + +DG V+++G  E+  LG   I         NV  P  V  L  +       +++  
Sbjct: 96  MALRQDGTVWTWGANENGQLGIGTI--------TNVNAPAQVPGLSGIK------AISGG 141

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + +  H  AL+E+G ++ +G  D G+LG
Sbjct: 142 LAY--HGMALSENGTVWTWGKNDNGELG 167


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 163/357 (45%), Gaps = 41/357 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR + S Q + +   + G     +++  G+V+++GK+  G   + V     V  P+++ES
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVG--VLHPKIIES 316

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 201
           L    V   A G   T  L+  G +  F WG     LG      + +   PH L G LE 
Sbjct: 317 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 374

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + VV++A G  +   ++   S   +++ G G  G LGHG  +    P+ +E  + L ++ 
Sbjct: 375 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 430

Query: 262 VVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
             VA G WH A +             G++ TWG    G LGH ++E + VP  V+AL D 
Sbjct: 431 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 489

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               V+     T  ++  G V++ G  E   LG + + D       +V  P     LK  
Sbjct: 490 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS---ICSVEGP-----LK-- 539

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            E V +IS  +S     H   LT +GK++ +G G +GQLG+    N  +R +P  V+
Sbjct: 540 TEFVREISSGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GNYVDRSSPTLVE 588



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 24/295 (8%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
           +AIA G  H+ A+   G ++ +G  ++S G         +W P  +   L+G+ +++ A 
Sbjct: 323 KAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC 382

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T +IS +GQ++ +G  +FG   +G   T  V  P+ VESLK + V   A G + TA
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRVKAVACGPWHTA 440

Query: 163 VL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
            +          +  G+++T+   +  +LGH  + + + P   +  L +    Q++    
Sbjct: 441 AIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTDSDFAQVSCAKA 499

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 271
             +AL    +G+ V+++G    G+LG   R D+     +E    L  + V  +++G+ H 
Sbjct: 500 LTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEFVREISSGSSHV 553

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           AV+  +G+V TWG G  G LG GN    S P +V+AL D +   +A G   T  V
Sbjct: 554 AVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAV 608



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  ++S G ++++G  + G LGHG T    RP+ + SL+G+R+   A G   T  I
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 442

Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +          +G+++ +G    G+  +  + +KLV  P  V++L +    Q +     
Sbjct: 443 VEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV--PTCVKALTDSDFAQVSCAKAL 500

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG H   +D     + G L+   V +I++G  ++  L   
Sbjct: 501 TVALTITGVVFTIGSKEHGQLGSH-RLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMN 559

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVG 275
                V++ G G  G+LG G+  D   P L+E  +   +  +        A   H ++ G
Sbjct: 560 GK---VFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 616

Query: 276 QDGRVC-------TWGWGRYGCLGHGNEECES 300
           +D  VC       ++   ++ C   G+  C S
Sbjct: 617 KDQSVCSRCRLSFSFARKKHNCYNCGSMFCNS 648



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 38/298 (12%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
           V+ P+L+ S + + V   + G    A+++++G V  FSWG +   RLGH      + P  
Sbjct: 256 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 312

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 251
           ++ +L    V  IA G  +  ALA   SG  ++  G G   LG       R+     +L 
Sbjct: 313 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 369

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
              + +++  V +A G WH A++   G++ T+G G +G LGHG+    + PK V++L  +
Sbjct: 370 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 427

Query: 312 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           +   VA G + T  + E           G ++++G  +   LGH   +D +       L 
Sbjct: 428 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH---SDKESK-----LV 479

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           P  V +L   +    Q+S   ++     T ALT +G ++  G+ + GQLG   +++ +
Sbjct: 480 PTCVKAL--TDSDFAQVSCAKAL-----TVALTITGVVFTIGSKEHGQLGSHRLDDSS 530


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 25/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  ++++G LGHGT    W P+ I   L+G+++     G   T
Sbjct: 339 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT 398

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  GQ++ FG  +FG   +G +    V+ P+ VESL  +  +  A G + TA +   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRTIAVACGVWHTAAIIEV 456

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   +EP  +   +E+    +IA G+   + 
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIED-NFHRIACGHSLTVG 515

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVG 275
           L    SG  V+++G  + G+LG+  ++D K P L+E +F   +++ +  A GA+H AV+ 
Sbjct: 516 LTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVEDKFAGESVEEI--ACGAYHVAVLT 569

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG+ E    P +V+AL D    ++A G +Y++ +
Sbjct: 570 SKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAI 620



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PRP+ S   + ++Q A G     L++  G+++ +G++S G   +GV   K V  P+LVE+
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGV--GKNVVQPRLVEA 327

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           + +  V   A G F T  ++  G +YT+  G  N   LGH T+ +   P  + G LE + 
Sbjct: 328 MASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL- 386

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             Q+A   C     A   S   +++ G G  G LGHG R +  +PR +E   L  L+ + 
Sbjct: 387 --QVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVES--LSGLRTIA 442

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A + +            G++ TWG G    LGHG+++    P  V +L +  
Sbjct: 443 VACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDN 502

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G V++ G      LG N  +DG+         P LV   K   
Sbjct: 503 FHRIACGHSLTVGLTTSGRVFTMGSTVYGQLG-NPQSDGK--------LPCLVED-KFAG 552

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V +I+     Y   H   LT   +++ +G G  G+LG
Sbjct: 553 ESVEEIAC--GAY---HVAVLTSKNEVFTWGKGANGRLG 586


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G   +++G LG+GT    W P+ I   L+G+++   A G   T
Sbjct: 336 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHT 395

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LIS  GQ++ FG  +FG   +G +  K ++ P+ V+SL  +  +  A G + TA +   
Sbjct: 396 ALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEV 453

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   + 
Sbjct: 454 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSITIG 512

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V++VG  + G+LG+    D K P L+E  +LL      VA GA+H  V+  
Sbjct: 513 LTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTS 567

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E    P +V++L D     +A G
Sbjct: 568 KNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 610



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   +     A G   + +++  G+V+ +G+++ G    G+   K VT P+LVE+
Sbjct: 267 PKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEA 324

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++ +G +YT+  G  N   LG+ T+ +   P  + G LE + 
Sbjct: 325 LAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQ 384

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A G  +   ++   S   +++ G G  G LGHG +    +PR ++   L  L+ + 
Sbjct: 385 VAYVACGPWHTALIS---STGQLFTFGDGTFGVLGHGDKKSISYPREVDS--LTGLRTIA 439

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E    P  V AL D  
Sbjct: 440 VACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 499

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +A G   T  ++  G V++ G      LG         N HA+   P LV   K + 
Sbjct: 500 FHKIACGHSITIGLTTSGQVFTVGSSVYGQLG---------NPHADGKQPCLVED-KLLG 549

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E   +++     Y   H   LT   ++Y +G G  G+LG
Sbjct: 550 ESAEEVAC--GAY---HVMVLTSKNEVYTWGKGANGRLG 583



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 40/318 (12%)

Query: 114 GQVYAFGK---DSF----GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           G ++ +G+   D+F     +    V     V  P+ +ES   +     A G   +A+++R
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G V+T+      RLG     +  +P  L+  L    V  +A G  +  A+        +
Sbjct: 294 QGEVFTWGEETGGRLGLGMGKDVTQPR-LVEALAATTVDLVACGEFHTCAVTMDGE---L 349

Query: 227 YSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           Y+ G G+   G LG+G+      P+ I    L  LQ   VA G WH A++   G++ T+G
Sbjct: 350 YTWGDGVHNAGLLGNGTDVSHWMPKRISGI-LEGLQVAYVACGPWHTALISSTGQLFTFG 408

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVY 333
            G +G LGHG+++  S P+ V +L  ++ I VA G + T  V E            G ++
Sbjct: 409 DGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLF 468

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G G+   LGH       G++    L P  V +L   N    +I+  +SI     T  L
Sbjct: 469 TWGDGDKNRLGH-------GDKEPR-LKPTCVPALIDYN--FHKIACGHSI-----TIGL 513

Query: 394 TESGKLYAFGAGDKGQLG 411
           T SG+++  G+   GQLG
Sbjct: 514 TTSGQVFTVGSSVYGQLG 531



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 27/239 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  ++S G +++FG  + G LGHG  +    PR + SL G+R I  A G   T  +
Sbjct: 391 GPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAV 450

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           +G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 451 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDYNFHKIACGHS 508

Query: 160 FTAVLSREGRVYTFSWGNDARLGHH----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            T  L+  G+V+T       +LG+      +P  VE   L  + E     ++A G  +++
Sbjct: 509 ITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAE-----EVACGAYHVM 563

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            L    S   VY+ G G  G+LGHG   D K P L+E  +  +++  ++A G+ ++A +
Sbjct: 564 VLT---SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVK--IIACGSNYSAAI 617



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           E+++ +A G  H + +TSK  VY++G  ++G+LGHG  E+   P  + SL+   +   A 
Sbjct: 550 ESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 609

Query: 103 GAGRTMLI 110
           G+  +  I
Sbjct: 610 GSNYSAAI 617


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 14/276 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T  G VYS+G  S+G LG G TE +  P  + +L G RI+  +AG+  +  +++ 
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G +Y +GK S+G   +G    KL+  P +VE L  + +VQ     G+  T  L   G+V+
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLI--PTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVW 636

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LG      +  P P+ G     PVV+I  G    +AL        +YS GC
Sbjct: 637 SWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALT---KDGKLYSWGC 693

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G   +LGHG++   + P+LIE       + VV  V+ GA H   +  D  V  WG     
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLS----ETVVSDVSVGAQHCVALTTDSDVYAWGKNSSF 749

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
            +    +   S P +++A +   A+ +A G   TFV
Sbjct: 750 EVNESGDIISS-PLMIEAASGKGALLIACGASETFV 784



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 168/371 (45%), Gaps = 29/371 (7%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
            V+ +G N  GQLG     +   PR   SL  +       G      ++D G+VYA G  +
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895

Query: 124  FGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
             G    G+  +  V +P  + SL  + I V + AI  G      ++ +G +Y +  G D 
Sbjct: 3896 HGR--LGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDG 3953

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LG  T  N   PH L+ +L++  V+    G  +    AC     ++Y+ G G  G+LGH
Sbjct: 3954 KLGLGTTVNMNVPH-LIESLKSKHVIDAGCGSSHS---ACITDDGSLYTWGKGRYGRLGH 4009

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
                 +  P+L+   +   +  V   +G          G V +WG G YG LG G  E  
Sbjct: 4010 NDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGS 4069

Query: 300  SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             VPK + +L     I +  G   +  ++  G VY++G G+   LGH    D    R    
Sbjct: 4070 KVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGH---GDDSHQR---- 4122

Query: 360  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
             TP+ V  L   +E V+ I        + H    TESGK++++G  D+GQ+G    N+ T
Sbjct: 4123 -TPRRVLGL-LAHENVIDIGCG-----SLHCIVCTESGKVFSWGDNDEGQIG----NDTT 4171

Query: 420  ERGN-PERVDI 429
            +  + P+R++I
Sbjct: 4172 QAVSVPKRINI 4182



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 11/297 (3%)

Query: 56   IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAA--AGAGRTMLIS 111
             AVT  G VY+ G  + G+LG G+++    P P+ SL  +GI + + A  +G    + ++
Sbjct: 3880 FAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVT 3939

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
              G++YA+G+   G  + G+  T  +  P L+ESLK+  V+ A  G+  +A ++ +G +Y
Sbjct: 3940 TQGELYAWGEGEDG--KLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLY 3997

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            T+  G   RLGH+      +P  L+  L+   V  +A G      L    SG  V+S G 
Sbjct: 3998 TWGKGRYGRLGHNDHETQHKPK-LVSALKGEQVTCVACGSGDAQTLCATASG-CVFSWGD 4055

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  GKLG G     K P+ I+   L     + +  G+  +  +   G V TWG G Y  L
Sbjct: 4056 GDYGKLGRGGNEGSKVPKKID--SLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRL 4113

Query: 292  GHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            GHG++  +  P +V+  L     I +  G     V +E G V+S+G  +   +G++ 
Sbjct: 4114 GHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDT 4170



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 11/273 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +AVT++G +Y++G    G+LG GTT     P  I SL+   +I A  G+  +  
Sbjct: 3930 SGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSAC 3989

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            I+D G +Y +GK  +G   +    T+    P+LV +LK   V   A G+     L     
Sbjct: 3990 ITDDGSLYTWGKGRYGRLGHNDHETQ--HKPKLVSALKGEQVTCVACGSGDAQTLCATAS 4047

Query: 170  VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
               FSWG+    +LG         P   + +L    V+++  G  + +AL    +   VY
Sbjct: 4048 GCVFSWGDGDYGKLGRGGNEGSKVPKK-IDSLTGKHVIKLLCGSQFSMALT---TAGHVY 4103

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
            + G G   +LGHG  + ++ PR +    LL  + V+ +  G+ H  V  + G+V +WG  
Sbjct: 4104 TWGKGDYYRLGHGDDSHQRTPRRV--LGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDN 4161

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              G +G+   +  SVPK +   +++   HVA G
Sbjct: 4162 DEGQIGNDTTQAVSVPKRINITDNICIDHVACG 4194



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 175/387 (45%), Gaps = 24/387 (6%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG-AG 105
            Q   G   S  V+  G V++ G  SSG+LG G       P  I SL    + + A   AG
Sbjct: 2962 QFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAG 3021

Query: 106  RTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            R +L ++  G+V+++G   +G+  +G    +    P+++E  +   + + + G   +A +
Sbjct: 3022 RHVLAVTADGKVFSWGDGQYGQLGHG--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAV 3079

Query: 165  SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            S  G ++T+  G D RLGH    N  +P  L+  LE + +  +A G      LA   + +
Sbjct: 3080 SVNGELFTWGQGADGRLGHGDSNNQTKPK-LVRALEKVRISCVACGSRNAHTLAAGDNSL 3138

Query: 225  AVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              ++ G G  GKLG   GS + +   ++I          + +  G   + ++ ++G+V T
Sbjct: 3139 --WAWGDGSFGKLGLKDGSSSTDVPVQVIT----FPSNIIQIECGMHFSVLLTKEGKVYT 3192

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            WG G Y  LG+ +   + +P +V  L       VA G      ++  G+VYS+G  E   
Sbjct: 3193 WGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQ 3252

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
             G+N+      NR      PQ+V SLK    R+ +I+  +S        +LT + K    
Sbjct: 3253 QGNNSTI---CNRK-----PQIVASLK--GHRICKIACGSSHSIAFAQGSLTTAVKFSPI 3302

Query: 403  G-AGDKGQLGIELVNNQTERGNPERVD 428
              +  K  LG  +V+ ++     E  D
Sbjct: 3303 SFSNSKDPLGASIVHGKSSDDAKETKD 3329



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           + P H + +T  G V+     S G     T E+ + P     +Q    I         + 
Sbjct: 470 SSPKHRVVLTVHGTVFYVMDASMGDF---TVEQLFFPGDEEIIQ----IDHNPSGNHILA 522

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G+VY++G+ S G    G+  T+  T+P  V +L    +V  + G+  +A ++ +G 
Sbjct: 523 LTKDGKVYSWGQGSNGV--LGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGV 580

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +YT+  G+  RLGH    + + P  + G L  + +VQ+  G      LA   +G  V+S 
Sbjct: 581 LYTWGKGSYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTGQ-VWSW 638

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G G  GKLG       K P+ I      +  PVV +  G   +  + +DG++ +WG G  
Sbjct: 639 GDGDYGKLGRPGSDQNKVPKPISGIG--STSPVVKIICGNQISMALTKDGKLYSWGCGDT 696

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             LGHGN+E    PK+++ L++     V+ G      ++ D DVY++G   S
Sbjct: 697 YQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSS 748



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 126/251 (50%), Gaps = 29/251 (11%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           VL+  G V+   +  DA +G  T    VE     G  E I +    +G  ++LAL     
Sbjct: 477 VLTVHGTVF---YVMDASMGDFT----VEQLFFPGDEEIIQIDHNPSGN-HILALT---K 525

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              VYS G G  G LG G+   +  P  +    L   + V ++AG+ H+A V +DG + T
Sbjct: 526 DGKVYSWGQGSNGVLGIGNTESQTAPTAVAA--LSGDRIVHISAGSMHSAAVTEDGVLYT 583

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV--ATGDYTTFVVSEDGDVYSFGCGES 340
           WG G YG LGHGN E + +P +V+ LN VK + V   +GD  T  + + G V+S+G G+ 
Sbjct: 584 WGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDY 643

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LG        G+    V  P+ ++ +   +  VV+I   N I     + ALT+ GKLY
Sbjct: 644 GKLGR------PGSDQNKV--PKPISGIGSTSP-VVKIICGNQI-----SMALTKDGKLY 689

Query: 401 AFGAGDKGQLG 411
           ++G GD  QLG
Sbjct: 690 SWGCGDTYQLG 700



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 175/362 (48%), Gaps = 35/362 (9%)

Query: 64   VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            V+ +G N   QLG   +E + + P   R+L  +  IQ A G+  + ++SD G+V+A G+ 
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDA 179
            S G    G+ G   +  P  + SL    V + A+   G    AV + +G+V+++  G   
Sbjct: 2986 SSG--RLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAV-TADGKVFSWGDGQYG 3042

Query: 180  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +LGH +  +   P  ++   +   + +++ G  +  A++       +++ G G  G+LGH
Sbjct: 3043 QLGHGSLQSYDRPK-MIEIFQAKHIREVSCGTGHSAAVSVNGE---LFTWGQGADGRLGH 3098

Query: 240  GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--HGNEE 297
            G   ++  P+L+   + + +  V   +   H    G D  +  WG G +G LG   G+  
Sbjct: 3099 GDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAG-DNSLWAWGDGSFGKLGLKDGSSS 3157

Query: 298  CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             +   +V+   +++  I +  G + + +++++G VY++G GE   LG+++ +        
Sbjct: 3158 TDVPVQVITFPSNI--IQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQP----- 3210

Query: 358  NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
                P LV  L   ++ + Q+++        H  ALT SG++Y++G  + GQ G    NN
Sbjct: 3211 ---IPTLVDGL--ASKTITQVAVG-----ALHCLALTSSGEVYSWGDNEHGQQG----NN 3256

Query: 418  QT 419
             T
Sbjct: 3257 ST 3258



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 21/248 (8%)

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           GN   A L+++G+VY++  G++  LG     +   P  +   L    +V I+AG  +  +
Sbjct: 517 GNHILA-LTKDGKVYSWGQGSNGVLGIGNTESQTAPTAV-AALSGDRIVHISAGSMH--S 572

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            A    G+ +Y+ G G  G+LGHG+  D+  P ++E    + +  V   +G  H   +  
Sbjct: 573 AAVTEDGV-LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 335
            G+V +WG G YG LG    +   VPK +  +      + +  G+  +  +++DG +YS+
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           GCG++  LGH       GN+  +V  P+L+  L +     V +          H  ALT 
Sbjct: 692 GCGDTYQLGH-------GNQE-HVRQPKLIEGLSETVVSDVSVG-------AQHCVALTT 736

Query: 396 SGKLYAFG 403
              +YA+G
Sbjct: 737 DSDVYAWG 744



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 21/194 (10%)

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            S  +V+  G    G+LG       K PRL E    LN  P ++  G      V  DG+V 
Sbjct: 3832 STFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELN--PAMITGGEQTLFAVTDDGKVY 3889

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFGC 337
              G+  +G LG G+ +  + P  + +L      VK I + +G      V+  G++Y++G 
Sbjct: 3890 ASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949

Query: 338  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
            GE   LG             N+  P L+ SLK  ++ V+     +S     H+  +T+ G
Sbjct: 3950 GEDGKLGLGTT--------VNMNVPHLIESLK--SKHVIDAGCGSS-----HSACITDDG 3994

Query: 398  KLYAFGAGDKGQLG 411
             LY +G G  G+LG
Sbjct: 3995 SLYTWGKGRYGRLG 4008



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           + I G   S+A+T  G +YS+G   + QLGHG  E   +P+ I  L    +   + GA  
Sbjct: 671 KIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQH 730

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
            + ++    VYA+GK+S  E     +   +++SP ++E+
Sbjct: 731 CVALTTDSDVYAWGKNSSFEVN---ESGDIISSPLMIEA 766



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 18/136 (13%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            +Q   G  H +A+TS G VYS+G N  GQ G+ +T    +P+ + SL+G RI + A G+ 
Sbjct: 3224 TQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSS 3283

Query: 106  RTMLISDAGQVYA--FGKDSF-------------GEAEYGVQGTKLVTSP---QLVESLK 147
             ++  +      A  F   SF             G++    + TK    P   Q++ SLK
Sbjct: 3284 HSIAFAQGSLTTAVKFSPISFSNSKDPLGASIVHGKSSDDAKETKDKERPSLTQIIISLK 3343

Query: 148  NIFVVQAAIGNFFTAV 163
                 Q A+G+  TA+
Sbjct: 3344 QHSKRQEALGHVLTAL 3359



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAG 105
            + + G   S+A+T+ G VY++G     +LGHG    +  PR +  L     +I    G+ 
Sbjct: 4085 KLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSL 4144

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              ++ +++G+V+++G +   E + G   T+ V+ P+ +    NI +   A G+  +   S
Sbjct: 4145 HCIVCTESGKVFSWGDND--EGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIAWS 4202

Query: 166  REGR 169
             + R
Sbjct: 4203 SKQR 4206


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 20/346 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 1670

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 1671 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 1728

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 1785

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 1843

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++ +GDVY++G      L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903

Query: 344  GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G           H N V  P LVT L+  N R +     +S  W A
Sbjct: 1904 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 1940



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 1709 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 1768

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 1769 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 1826

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +        L  + +  +A 
Sbjct: 1827 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVIIEDVAV 1878

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 1879 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 1933

Query: 270  HAA 272
            H+A
Sbjct: 1934 HSA 1936



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 1629 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1688

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 1689 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 1746

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 1747 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 1793

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 1794 GDYGKLGL---GNSTAKSSPQKIDV 1815



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 1668

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 1669 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 1727

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 1728 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 1782

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 1783 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 1842

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 1843 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 1887

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 1888 SNGDVYAWGSNSEGQLGLGHTNHVRE 1913


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 33/356 (9%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            V ++GS   GQLG GT +E+     + +L+   +    +G+  ++ I D G ++ +G +
Sbjct: 6   TVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWN 65

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
             G   +  + TK    P  V++L N+ +VQAAIG +    +  +GR Y +      + G
Sbjct: 66  QRGTLGHPPE-TKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 183 HHTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
                +++E  PL   +         + V Q+AAG  + + L  +     V+S     G 
Sbjct: 125 EEPGKDEME-RPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGH---VWS----WGQ 176

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
               G       P  ++  + + L    +A GA+H   + ++G +  WG   YG LG G+
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALEENGTLWAWGNNEYGQLGTGD 232

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            +  S P  VQ L+ +  + +A G + +  +++ G+VY +G GE   LG         N 
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGD------ND 286

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            ++ + PQ V  L    E ++Q+S   +     H+ ALT  G++++FG GD G+LG
Sbjct: 287 KSSKMLPQKVNLL--AGEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 28/308 (9%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           ++G  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  ++I+QAA G    
Sbjct: 44  VSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLV---ESLKNIFVVQAAIGNFFTA 162
           + + D G+ YA+G + +G+   E G    +      +V        + V Q A G   + 
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSV 163

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
           VL+REG V+++        G    P D++    P  + G LEN+ ++ + A +     LA
Sbjct: 164 VLTREGHVWSW--------GQPWPPGDIKQISIPVRVQG-LENVRLIAVGAFH----NLA 210

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            + +G  +++ G    G+LG G       P  ++    L L  V +AAG WH+  +   G
Sbjct: 211 LEENG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTL--VDIAAGGWHSTALTDKG 267

Query: 279 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            V  WG G +G LG G+ +  S  +P+ V  L     I V+ G   +  ++ DG ++SFG
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327

Query: 337 CGESASLG 344
            G+   LG
Sbjct: 328 RGDHGRLG 335



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN + IA G  H++A+   G ++++G+N  GQLG G T+   +P P++ L  + ++  AA
Sbjct: 196 ENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAA 255

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  ++D G+VY +G+   G   +G         PQ V  L    ++Q + G   + 
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315

Query: 163 VLSREGRVYTFSWGNDARLG 182
            L+R+GR+++F  G+  RLG
Sbjct: 316 ALTRDGRIFSFGRGDHGRLG 335



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG G  G LG G  + +    VV+AL       V +G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             +LGH         +  N+  P  V +L   N ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPP-----ETKTENI--PSQVKAL--ANVKIVQAAIGG---W--HCLAVDDQGRA 112

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           YA+G  + GQ G E   ++ ER  P R DI
Sbjct: 113 YAWGGNEYGQCGEEPGKDEMER--PLRRDI 140


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 153/346 (44%), Gaps = 48/346 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L+++
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L N+ +   A G + T  ++  G +YT+  G  N   LGH  E +   P  + G LE I 
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E  +   L+ V 
Sbjct: 419 VSAISCGPWHTAIVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 473

Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL + 
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLV 365
               +A G   T  ++  G VY+ G      LG N  ADG      +G  H N       
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF------ 586

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    V +IS     Y   H   LT   ++Y +G G  G+LG
Sbjct: 587 ---------VEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 618



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 148/358 (41%), Gaps = 37/358 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 425 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 484

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + T+LV  P  V +L      Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 542

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 543 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 601

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ VV      AA   H  V
Sbjct: 602 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 658

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+           R+ C       C +       K   A N  K   V    Y
Sbjct: 659 SGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCY 718

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQ 377
           +      + D YS     S   G N   D +    +N    +L  + S K ++ R  +
Sbjct: 719 SKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSK 776



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I +L  + I   A G   T  ++ +
Sbjct: 321 HATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLS 380

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 381 GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFT 440

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 441 FGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 500

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P  +   +E     QIA G+C  +AL    +   VY+
Sbjct: 501 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHCMTVALT---TSGHVYT 556

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 557 MGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 614

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ +  S P +V+AL D +   V  G
Sbjct: 615 GRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 357

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 358 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 415

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 527

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 528 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 576

Query: 426 RVD 428
           RV+
Sbjct: 577 RVE 579



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS   GQLG+   +     R    L    + + + GA  
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 596

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK + G   +G   T   +SP LVE+LK+  V     G  FTA +
Sbjct: 597 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 163/351 (46%), Gaps = 32/351 (9%)

Query: 67  FGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR      G ++     G   T+ + D G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+++++  G+D +LG +
Sbjct: 64  GQLGH----EKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLN 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGS 241
                V     +  L ++ + Q+A GY +  AL+    G  V+S G    G+LG   HGS
Sbjct: 120 NFEECVRVPRNIKCLSDVQIAQVACGYRHSHALS---KGGQVFSWGQNQFGQLGLGMHGS 176

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
                 P++I+  Q   +    ++AG  H+  +   G V  WG  ++G LG  +      
Sbjct: 177 SIST--PQIIQSLQ--GIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWF 232

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P ++++L   + I+V+ G+  T  ++++G V++FG G    LGHN+       R    L 
Sbjct: 233 PALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELM 292

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
             +VT          QIS         HT A T  SGK+Y+FG G  GQLG
Sbjct: 293 GNIVT----------QISCGRQ-----HTLAFTPSSGKMYSFGLGGNGQLG 328



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 10/206 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q   G  HS A++  G V+S+G N  GQLG   HG++     P+ I+SLQGI   Q +A
Sbjct: 140 AQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFAQLSA 197

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +  I+ +G V+ +G++ FG+   G+  T     P L++SL++  V+  + G   TA
Sbjct: 198 GGAHSFAITLSGAVFGWGRNKFGQL--GLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTA 255

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            L++EG V+TF  G   +LGH++  +++ P  +   + NI V QI+ G  + LA    PS
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNI-VTQISCGRQHTLAFT--PS 312

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP 248
              +YS G G  G+LG  S  + K P
Sbjct: 313 SGKMYSFGLGGNGQLGTRSTCNRKSP 338



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 13/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ +   G VY+ G N  GQLGH    +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRK--KPEHVVALDAQIIVAVSGGESHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQ++++G  S G+        + V  P+ ++ L ++ + Q A G   +  LS+ G+V
Sbjct: 100 NDKGQIFSWGLGSDGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQV 158

Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             FSWG +   +LG     + +    ++ +L+ IP  Q++AG  +  A+    SG AV+ 
Sbjct: 159 --FSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL--SG-AVFG 213

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG     D   P L++   L + + + V+ G  H A + ++G V T+G G Y
Sbjct: 214 WGRNKFGQLGLNDTNDRWFPALLK--SLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGY 271

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G LGH +   E  P+ V  L       ++ G  +T       G +YSFG G +  LG
Sbjct: 272 GQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A+T  G V+ +G N  GQLG   T + W P  ++SL+  R+I  + G  
Sbjct: 193 AQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q + G   T A  
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFT 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G++Y+F  G + +LG  +  N   P P+ G
Sbjct: 311 PSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKG 343


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 150/343 (43%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+++++G++S G   +GV     V  P+L++S
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPKLIDS 360

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N  +   A G + T  ++  G +YT  WG    N   LGH  E +   P  + G LE 
Sbjct: 361 LSNTNIELVACGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 418

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG       PR +E   L   + 
Sbjct: 419 IHVSSISCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDTKSVSKPREVE--SLKGHRT 473

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V+ A G WH A V +             G++ TWG G  G LGHG++E + VP  V AL 
Sbjct: 474 VISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 533

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D     VA G   T  ++  G VY+ G      LG N  ADG+               L 
Sbjct: 534 DPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGK---------------LP 577

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 578 TRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 620



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 431

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ +GQ++ FG  +FG   +G   TK V+ P+ VESLK    V +A G + TA +   
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVWHTAAVVEI 489

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P   +  L +    ++A G+   +
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVDPNFCRVACGHSLTV 548

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    SG  VY++G  + G+LG+  + D K P  +E  +L       +A GA+H AV+ 
Sbjct: 549 ALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPTRVEG-KLAKSFVEEIACGAYHVAVLT 603

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V+AL D +   +A G   T  +
Sbjct: 604 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 654



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG T+   +PR + SL+G R + +A G   T  +
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAV 486

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G    G   +G +  KLV  P  V +L +    + A G+
Sbjct: 487 VEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVDPNFCRVACGH 544

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + +   P  + G L    V +IA G  ++  L 
Sbjct: 545 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLT 603

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       A    H  V
Sbjct: 604 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 661 SGVDQSMCS 669



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 14/172 (8%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G + D   P+ +E   +L++Q +  A G  HAA+V + G + +WG    G LGHG +   
Sbjct: 295 GMKMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV 352

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             PK++ +L++     VA G+Y T  V+  GD+Y++G G      +N    G GN  ++ 
Sbjct: 353 LHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGT-----YNFGLLGHGNEVSHW 407

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +        K+VN  +  I +++      HT  +T SG+L+ FG G  G LG
Sbjct: 408 VP-------KRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLG 452


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 38/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L+++
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L N+ +   A G + T  ++  G +YT+  G  N   LGH  E +   P  + G LE I 
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L+ V 
Sbjct: 419 VSAISCGPWHTAIVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVR 473

Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL + 
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               +A G   T  ++  G VY+ G      LG N  ADG        + P  V      
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADG--------MLPVRV------ 578

Query: 372 NERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
            E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 579 -EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 618



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 148/358 (41%), Gaps = 37/358 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 425 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 484

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + T+LV  P  V +L      Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 542

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 543 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 601

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ VV      AA   H  V
Sbjct: 602 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 658

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+           R+ C       C +       K   A N  K   V    Y
Sbjct: 659 SGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCY 718

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQ 377
           +      + D YS     S   G N   D +    +N    +L  + S K ++ R  +
Sbjct: 719 SKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSK 776



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I +L  + I   A G   T  ++ +
Sbjct: 321 HATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLS 380

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 381 GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFT 440

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 441 FGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 500

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P   +  L      QIA G+C  +AL    +   VY+
Sbjct: 501 KIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHCMTVALT---TSGHVYT 556

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 557 MGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 614

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ +  S P +V+AL D +   V  G
Sbjct: 615 GRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 357

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 358 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 415

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 527

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 528 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 576

Query: 426 RVD 428
           RV+
Sbjct: 577 RVE 579



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS   GQLG+   +     R    L    + + + GA  
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 596

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK + G   +G   T   +SP LVE+LK+  V     G  FTA +
Sbjct: 597 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +  SG LGHG     W P+ +   LQG+ I   + G   T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHT 427

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++ AG+++ FG  +FG   +G + +  ++ P+ VESLK +  V+AA G + TA +   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEV 485

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                    +  G+++T+  G+  RLGH  +   + P  +   +E     Q+A G+   +
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHSLTV 544

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   +Y++G  + G+LG+  + D K P  +E  +L       +A GA+H AV+ 
Sbjct: 545 ALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKSFVEELACGAYHVAVLT 599

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V+AL D +   +A G   T  +
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S+  + +   A G     L++  G+V+++G++  G   +G  G      P+L+++
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHG--GDSDAHHPKLIDA 356

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N+ +   A G + T  ++  G +YT  WG    N   LGH  + +   P  + G L+ 
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYT--WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + +  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 415 LHISSISCGPWHT---ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES--LKGLRT 469

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALV 529

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G +Y+ G      LG N  ADG+         P  V    
Sbjct: 530 EPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NPQADGK--------LPARV---- 576

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  S    +   A H   LT   ++Y +G G  G+LG
Sbjct: 577 ---EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 147/307 (47%), Gaps = 38/307 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
           P+ +ES+  + V   A GN   A+++++G V  FSWG +   RLGH  + +   P  L+ 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N+ +  +A G  +  A+      +  +  G    G LGHG       P+ +    L 
Sbjct: 356 ALSNLNIELVACGEYHTCAVTLS-GDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-PLQ 413

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            L    ++ G WH A+V   G++ T+G G +G LGHG+ +  S+P+ V++L  ++ +  A
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAA 473

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ A  L P  V
Sbjct: 474 CGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTCV 525

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 526 AALVEPN--FCQVACGHSL-----TVALTNSGHIYTMGSPVYGQLG----NPQADGKLPA 574

Query: 426 RVDIDLS 432
           RV+  LS
Sbjct: 575 RVEGKLS 581



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 423 GPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  +LV  P  V +L      Q A G+
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGH 540

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G +YT       +LG + + +   P  + G L    V ++A G  ++  L 
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLT 599

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHGS  D   P L+E  +   ++ +       AA   H  V
Sbjct: 600 ---SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 656

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 657 SGVDQSMCS 665



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           S+ D   P+ +E   +L++Q +  A G  HAA+V + G V +WG    G LGHG +    
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 358
            PK++ AL+++    VA G+Y T  V+  GD+Y++G G   S  LGH     G+   H  
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-----GKDVSH-- 402

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ VT   Q     + IS  +   W  HT  +T +GKL+ FG G  G LG
Sbjct: 403 -WVPKRVTGPLQ----GLHISSISCGPW--HTALVTSAGKLFTFGDGTFGVLG 448


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 158/360 (43%), Gaps = 45/360 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+++++G++S G   +GV     V  P+L+++
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VMHPKLIDA 358

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N  +   A G + T  ++  G +YT  WG    N   LGH  E +   P  + G LE 
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 416

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     P+ +E   L  L+ 
Sbjct: 417 IHVSSISCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSISLPKEVE--SLKGLRT 471

Query: 262 VVVAAGAWHAAVV------------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V               G++ TWG G  G LGHG++E + VP  V AL 
Sbjct: 472 VQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 531

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T   +  G VY+ G      LG N +ADG+         P  V    
Sbjct: 532 EPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLG-NPLADGK--------LPTRV---- 578

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
              E  +  S    I   A H   LT   ++Y +G G  G+LG     +  +R +P  V+
Sbjct: 579 ---EGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGH---GDTDDRNSPSLVE 632



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 151/318 (47%), Gaps = 40/318 (12%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           +GV+   L   P+ +ES   + V   A G    A+++++G +  FSWG ++  RLGH  +
Sbjct: 292 FGVKMDSLF--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 347

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            + + P  L+  L N  +  +A G  +  A+      +  +  G    G LGHG+     
Sbjct: 348 SDVMHPK-LIDALSNTNIELVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHW 405

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+PK V+
Sbjct: 406 VPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVE 464

Query: 307 ALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGN 354
           +L  ++ +  A G + T  V E             G ++++G G+   LGH       G+
Sbjct: 465 SLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GD 517

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
           + A  L P  V +L + N    Q++  +S+     T A T SG +Y  G+   GQLG  L
Sbjct: 518 KEAK-LVPTCVAALVEPN--FCQVACGHSL-----TVARTTSGHVYTMGSPVYGQLGNPL 569

Query: 415 VNNQTERGNPERVDIDLS 432
            + +     P RV+  LS
Sbjct: 570 ADGKL----PTRVEGKLS 583



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 150/347 (43%), Gaps = 74/347 (21%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q IA G  H+  VT +G ++S+G  S G+LGHG   +   P+ I +L    I   A G  
Sbjct: 313 QNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEY 372

Query: 106 RTMLISDAGQVYAFGKD------------------------------------------- 122
            T  ++ +G +Y +G                                             
Sbjct: 373 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 432

Query: 123 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 164
                  +FG+  +GV G    K ++ P+ VESLK +  VQAA G + TA +        
Sbjct: 433 TSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNS 492

Query: 165 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
                  G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   L +A  
Sbjct: 493 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHS--LTVART 549

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            SG  VY++G  + G+LG+    D K P  +E  +L       +A GA+H AV+     V
Sbjct: 550 TSGH-VYTMGSPVYGQLGN-PLADGKLPTRVEG-KLSKSFVEEIACGAYHVAVLTSKTEV 606

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            TWG G  G LGHG+ +  + P +V+AL D +   +A G  T+F  +
Sbjct: 607 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG--TSFTAA 651



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 129/313 (41%), Gaps = 35/313 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    P+ + SL+G+R +QAA G   T  +
Sbjct: 425 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAV 484

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV  P  V +L      Q A G+
Sbjct: 485 IEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 542

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T   +  G VYT       +LG+      + P  + G L    V +IA G  ++  L 
Sbjct: 543 SLTVARTTSGHVYTMGSPVYGQLGNPLADGKL-PTRVEGKLSKSFVEEIACGAYHVAVLT 601

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA   H  V
Sbjct: 602 ---SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWV 658

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+       +   R+ C   G   C S       K   A N  KA  V    Y
Sbjct: 659 SGVDQSMCSGCRLPFNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCY 718

Query: 322 TTFVVSEDGDVYS 334
                + + D  S
Sbjct: 719 NKLRKAIETDASS 731


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 153/346 (44%), Gaps = 48/346 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L+++
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 404

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L N+ +   A G + T  ++  G +YT+  G  N   LGH  E +   P  + G LE I 
Sbjct: 405 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 464

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E  +   L+ V 
Sbjct: 465 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 519

Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL + 
Sbjct: 520 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 579

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLV 365
               +A G   T  ++  G VY+ G      LG N  ADG      +G  H N       
Sbjct: 580 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF------ 632

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    V +IS     Y   H   LT   ++Y +G G  G+LG
Sbjct: 633 ---------VEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 664



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 148/358 (41%), Gaps = 37/358 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 471 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 530

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + T+LV  P  V +L      Q A G+
Sbjct: 531 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 588

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 589 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 647

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ VV      AA   H  V
Sbjct: 648 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 704

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+           R+ C       C +       K   A N  K   V    Y
Sbjct: 705 SGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCY 764

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQ 377
           +      + D YS     S   G N   D +    +N    +L  + S K ++ R  +
Sbjct: 765 SKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSK 822



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I +L  + I   A G   T  ++ +
Sbjct: 367 HATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLS 426

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 427 GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFT 486

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 487 FGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 546

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P  +   +E     QIA G+C  +AL    +   VY+
Sbjct: 547 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHCMTVALT---TSGHVYT 602

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 603 MGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 660

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ +  S P +V+AL D +   V  G
Sbjct: 661 GRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 691



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 403

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 404 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 461

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 462 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 521

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 522 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 573

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 574 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 622

Query: 426 RVD 428
           RV+
Sbjct: 623 RVE 625



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS   GQLG+   +     R    L    + + + GA  
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 642

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK + G   +G   T   +SP LVE+LK+  V     G  FTA +
Sbjct: 643 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 698


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 169/363 (46%), Gaps = 37/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+ S G V+++G N  GQLG GTT     P  +++L G  II  ++G   ++ 
Sbjct: 232 AGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLA 289

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + D G V+A+G +  G+   G   +K +  P  V+ L  I  V  + G +++  L  +G 
Sbjct: 290 LKDDGTVWAWGDNESGQLGDGTTNSKYI--PSQVQGLSGI--VSISCGFYYSMALKNDGT 345

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +      +LG  T  +     P+ G L+   V+ IA G  + +AL    +   V++ 
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTAVPVSG-LDG--VIAIACGVNHSMALRNDGT---VWTW 399

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G++  +     I     +    + +  G  H+  +  DG V  WG  +YG
Sbjct: 400 GFNAFGQLGDGTKVSKNTAVPISGLDGI----IAITCGTSHSMALKDDGTVWAWGDNQYG 455

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG+G     + P  V  L+ +K+I    G  T+F +  DG V+++G  E   LG     
Sbjct: 456 QLGNGTFISNTTPSQVSNLSGIKSIFC--GYSTSFALKPDGTVWAWGNNEYGELGKG--- 510

Query: 350 DGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                      T +++   + +N   +  IS+ +S     H  AL   G ++A+G    G
Sbjct: 511 ----------FTTRVIYPTETLNIGDIKAISIGSS-----HCLALKNDGTVWAWGDNRYG 555

Query: 409 QLG 411
           QLG
Sbjct: 556 QLG 558



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 170/363 (46%), Gaps = 39/363 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++A+ S G V++ G N  GQLG+  T +   P P+  L  +  I  +AG   +M +
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI--SAGKYYSMAL 240

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
              G V+ +G++ +G+   G   T+L  SP  V++L  I  + +  GN  +  L  +G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRL--SPVQVQNLSGIIAISS--GNSHSLALKDDGTV 296

Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +  +WG++   +LG  T  +   P  + G L  I  V I+ G+ Y +AL    +   V+ 
Sbjct: 297 W--AWGDNESGQLGDGTTNSKYIPSQVQG-LSGI--VSISCGFYYSMALKNDGT---VWV 348

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G+ TD      +     +    + +A G  H+  +  DG V TWG+  +
Sbjct: 349 WGDNTSGQLGDGTTTDRNTAVPVSGLDGV----IAIACGVNHSMALRNDGTVWTWGFNAF 404

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G +  ++    +  L+ + AI   T    +  + +DG V+++G  +   LG+   
Sbjct: 405 GQLGDGTKVSKNTAVPISGLDGIIAITCGTSH--SMALKDDGTVWAWGDNQYGQLGN--- 459

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
               G   +N  TP  V++L  +       S          +FAL   G ++A+G  + G
Sbjct: 460 ----GTFISNT-TPSQVSNLSGIKSIFCGYS---------TSFALKPDGTVWAWGNNEYG 505

Query: 409 QLG 411
           +LG
Sbjct: 506 ELG 508



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 44/367 (11%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS+A+ + G V+++G N+ GQLG GT   +    PI  L GI  I    G   
Sbjct: 379 AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDGI--IAITCGTSH 436

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M + D G V+A+G + +G+   G   +   T+P  V +L  I  +       F   L  
Sbjct: 437 SMALKDDGTVWAWGDNQYGQLGNGTFISN--TTPSQVSNLSGIKSIFCGYSTSF--ALKP 492

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G V+  +WGN+    LG       + P   L  + +I  + I + +C    LA +  G 
Sbjct: 493 DGTVW--AWGNNEYGELGKGFTTRVIYPTETL-NIGDIKAISIGSSHC----LALKNDG- 544

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V++ G    G+LG G+ T +  P  +     +      ++AG  H+  +  DG V  WG
Sbjct: 545 TVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGI----TAISAGGSHSLALKSDGTVWAWG 600

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G LG G +E  + P  V  L+ +  I      Y +F +  DG V+ +G        
Sbjct: 601 QNNVGQLGDGTKEDRNTPVQVSELSGITVISNCI--YRSFALKNDGTVWVWG-------- 650

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
               +D        +  P  ++ L  +      I++    Y   H  AL   G ++A+G 
Sbjct: 651 ----SDSYNLPLEKMTMPIQISGLSGI------IAIECGTY---HNLALKNDGTVWAWGK 697

Query: 405 GDKGQLG 411
            + GQ G
Sbjct: 698 NNFGQFG 704



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 169/407 (41%), Gaps = 89/407 (21%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR------------- 96
           +G  HS+A+   G V+++G N SGQLG GTT  ++ P  ++ L GI              
Sbjct: 282 SGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALK 341

Query: 97  -----------------------------------IIQAAAGAGRTMLISDAGQVYAFGK 121
                                              +I  A G   +M + + G V+ +G 
Sbjct: 342 NDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGF 401

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           ++FG+   G + +K    P  +  L  I  +    G   +  L  +G V+  +WG++   
Sbjct: 402 NAFGQLGDGTKVSKNTAVP--ISGLDGIIAITC--GTSHSMALKDDGTVW--AWGDNQYG 455

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAVYSVGCGLGGKLG 238
           +LG+ T  ++  P   +  L  I  +     +C Y  + A +P G  V++ G    G+LG
Sbjct: 456 QLGNGTFISNTTPSQ-VSNLSGIKSI-----FCGYSTSFALKPDG-TVWAWGNNEYGELG 508

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            G  T     R+I   + LN+  +  ++ G+ H   +  DG V  WG  RYG LG G   
Sbjct: 509 KGFTT-----RVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTT 563

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
            +S+P  V  ++ + AI  + G   +  +  DG V+++G      LG     D       
Sbjct: 564 IKSLPVQVSGISGITAI--SAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRN----- 616

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
              TP  V+ L  +        ++N IY    +FAL   G ++ +G+
Sbjct: 617 ---TPVQVSELSGIT------VISNCIY---RSFALKNDGTVWVWGS 651



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 167/408 (40%), Gaps = 88/408 (21%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS+A+   G V+++G N  GQLG+GT      P  + +L GI+ I    G   +  +
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSI--FCGYSTSFAL 490

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
              G V+A+G + +GE   G   T  V  P    ++ +I  +  +IG+     L  +G V
Sbjct: 491 KPDGTVWAWGNNEYGELGKGF--TTRVIYPTETLNIGDIKAI--SIGSSHCLALKNDGTV 546

Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +  +WG++   +LG  T      P  + G      +  I+AG  + LAL    S   V++
Sbjct: 547 W--AWGDNRYGQLGDGTTTIKSLPVQVSGIS---GITAISAGGSHSLAL---KSDGTVWA 598

Query: 229 VGCGLGGKLGHGSRTDEKHP---------------------------------------- 248
            G    G+LG G++ D   P                                        
Sbjct: 599 WGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPL 658

Query: 249 -RLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            ++    Q+  L  ++ +  G +H   +  DG V  WG   +G  G G     ++P  V 
Sbjct: 659 EKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVS 718

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV- 365
            L+ VKAI  A G   +  +  DG V+ +G                  R    ++P  V 
Sbjct: 719 GLSGVKAI--AVGGNRSIALKSDGTVWQWG------------------RILVSVSPSTVE 758

Query: 366 --TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             T+ +QV+     +S++N++       AL   GK++ +GA D GQLG
Sbjct: 759 TWTTARQVDGLSEIVSISNNV-------ALKNDGKVFTWGANDYGQLG 799



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 37/301 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V+++G N+ GQLG GT E+   P  +  L GI +I       R+  
Sbjct: 582 AGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNC--IYRSFA 639

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G V+ +G DS     Y +   K+ T P  +  L  I  ++   G +    L  +G 
Sbjct: 640 LKNDGTVWVWGSDS-----YNLPLEKM-TMPIQISGLSGIIAIEC--GTYHNLALKNDGT 691

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   N  + G  T            T  NIP VQ+ +G   + A+A   +     S+
Sbjct: 692 VWAWGKNNFGQFGDGTT-----------TTTNIP-VQV-SGLSGVKAIAVGGN----RSI 734

Query: 230 GCGLGGKLGHGSRT-DEKHPRLIEQF----QLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
                G +    R      P  +E +    Q+  L  +V  +   +   +  DG+V TWG
Sbjct: 735 ALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSIS---NNVALKNDGKVFTWG 791

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              YG LG G          V  L  V    VA+ D T+ V+  DG + ++G      LG
Sbjct: 792 ANDYGQLGDGTTTARVTVAPVSGLEGVAG--VASSDTTSMVLMNDGTIRAWGKNNFGQLG 849

Query: 345 H 345
           +
Sbjct: 850 N 850



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 20/159 (12%)

Query: 261 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           P++ V+ G  H   +  DG V   G   YG LG+ N    + P  V+ LN V +I  + G
Sbjct: 176 PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI--SAG 233

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
            Y +  +  DG V+++G  +   LG     DG     A  L+P  V +L      ++ IS
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLG-----DG---TTATRLSPVQVQNL----SGIIAIS 281

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             NS     H+ AL + G ++A+G  + GQLG    N++
Sbjct: 282 SGNS-----HSLALKDDGTVWAWGDNESGQLGDGTTNSK 315



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           I    +++A+ + G V+++G+N  GQLG GTT       P+  L+G+  +  A+    +M
Sbjct: 772 IVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGV--ASSDTTSM 829

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQG 133
           ++ + G + A+GK++FG+   G +G
Sbjct: 830 VLMNDGTIRAWGKNNFGQLGNGERG 854


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 15/289 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS+ VT  G + + G N +GQLG G  E       ++  + I  +  AAG   T+  
Sbjct: 112 GGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADV--AAGFWHTLAA 169

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S  G++YA+G +  G+  +     KL   PQ +  L++  + Q A G++ +  L+++G V
Sbjct: 170 SKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEV 229

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           YT+ +G   RLGH +  ++  P  +   + ENI    I AG+ Y  + A   SG  V+  
Sbjct: 230 YTWGFGAHGRLGHGSTEDEFMPKRVEALVGENIS--SIHAGFEY--SSAVSTSG-KVFVW 284

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G G    LG G + D+  P +++ F     Q   +A G++HAA V   G + TWG   +G
Sbjct: 285 GYGHFYVLGQGDKKDQLAPVVLD-FPTSIRQ---LAFGSFHAAAVSHSGMLFTWGHATHG 340

Query: 290 CLGHGNEECESV--PKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 335
            LGHG +    +  P V+ A   ++ +  VA G   T VV+  GDV+SF
Sbjct: 341 PLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 175/402 (43%), Gaps = 50/402 (12%)

Query: 23  CGGSWKLVLRF------LLAGEACCR-RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 75
           C   W +   F      +L+    CR    S  I G    + +     ++S+GS   G+ 
Sbjct: 16  CTSRWTMSSAFRHKENSMLSAPLICRLHAGSNLIHGREQKVTLAGARTLWSWGSADHGRG 75

Query: 76  GHG-----------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           G G             E E   +P+  L    I + A G   +M+++++G++   G +  
Sbjct: 76  GSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKKVACGGAHSMIVTESGRLLTCGLNDN 133

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+   G     L  + +  E      +   A G + T   S++G++Y +      +LGHH
Sbjct: 134 GQLGLG----NLENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHH 189

Query: 185 TEPND--VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
                  VEP  +L  L + P+ Q+A G  + +AL        VY+ G G  G+LGHGS 
Sbjct: 190 DTAVKLAVEPQEIL-LLRDAPIKQVACGSYHSMALTKDGE---VYTWGFGAHGRLGHGST 245

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            DE  P+ +E     N+    + AG  +++ V   G+V  WG+G +  LG G+++ +  P
Sbjct: 246 EDEFMPKRVEALVGENISS--IHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAP 303

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLT 361
            V+     ++ +  A G +    VS  G ++++G      LGH       G +  N +L 
Sbjct: 304 VVLDFPTSIRQL--AFGSFHAAAVSHSGMLFTWGHATHGPLGH-------GLKSPNIILE 354

Query: 362 PQLVTSLKQV-NERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           P ++ +  Q+ N + V          + HT  +T +G +++F
Sbjct: 355 PTVLDAPAQLQNSKQVACG-------SQHTLVVTGTGDVFSF 389



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 11/226 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS+A+T  G VY++G  + G+LGHG+TE+E+ P+ + +L G  I    AG   
Sbjct: 212 QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEY 271

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +  +S +G+V+ +G   F     G +  +L  +P +++   +I   Q A G+F  A +S 
Sbjct: 272 SSAVSTSGKVFVWGYGHFYVLGQGDKKDQL--APVVLDFPTSI--RQLAFGSFHAAAVSH 327

Query: 167 EGRVYTFSWGNDARLGHHTE-PNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            G ++T+       LGH  + PN + EP  L    +     Q+A G  + L +       
Sbjct: 328 SGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGD-- 385

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
            V+S G G  G+LG GS  D   P+ I +F   +L+   VA G +H
Sbjct: 386 -VFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQ--VACGLFH 428



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 321
           VAAG WH     + G++  WG  ++G LGH +   +    P+ +  L D     VA G Y
Sbjct: 159 VAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSY 218

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            +  +++DG+VY++G G    LGH +  D    +    L  + ++S+    E    +S +
Sbjct: 219 HSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTS 278

Query: 382 NSIY-WNAHTFALTESGKLYAFGAGDK 407
             ++ W          G  Y  G GDK
Sbjct: 279 GKVFVWG--------YGHFYVLGQGDK 297


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 152/295 (51%), Gaps = 13/295 (4%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           ++G  HS+ + S G V S G NS GQLG   T    +P  I +L+ + +   + G   ++
Sbjct: 1   MSGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 60

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +   G+V+A+G  S  E + G+   K  T  P+ +++L +I ++Q A G++ +  LS +
Sbjct: 61  AVCHKGRVFAWGAAS--EGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118

Query: 168 GRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           G+V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +  
Sbjct: 119 GQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLSGTSF 175

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
              S   G     G+ +      P L+   + L++  V ++ G  H AV+ QDG+V T+G
Sbjct: 176 GWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSV--VFISCGYEHTAVLTQDGKVFTFG 233

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 338
              YG LGH +   +  P++V+ +  + +  +  G Y T   V   G V SFG G
Sbjct: 234 DNSYGQLGHDSTAEKRGPQLVERIEGLVS-QIDCGSYHTLAYVYTTGQVVSFGRG 287



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 25/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I++L  I+IIQ A G   ++ 
Sbjct: 55  GKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLA 114

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S+ GQV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 115 LSEDGQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 173

Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +F WG++     A  G++      +P  L+G L+ + VV I+ GY +   L       
Sbjct: 174 --SFGWGSNNAGQLALSGNNAPVQRYKP-VLVGALKTLSVVFISCGYEHTAVLT---QDG 227

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
            V++ G    G+LGH S  +++ P+L+E+ + L  Q   +  G++H  A V   G+V ++
Sbjct: 228 KVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQ---IDCGSYHTLAYVYTTGQVVSF 284

Query: 284 GWGRYGCLGHGNE-----ECESVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
           G G  GC           E   V  ++ A  L DV+  H+  G Y  FV +
Sbjct: 285 GRGP-GCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGTYANFVTT 334



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V S G    G+LG       + P  I   + L++   +V+ G  H+  V   GRV  WG
Sbjct: 15  TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHV--ALVSCGKEHSLAVCHKGRVFAWG 72

Query: 285 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
               G LG G  +E   +PK ++ L D+K I VA G Y +  +SEDG V+S+G      L
Sbjct: 73  AASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQL 132

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
                  G G    +  +PQ V SL+        I L       AH+FAL+ SG  + +G
Sbjct: 133 -------GLGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLSGTSFGWG 178

Query: 404 AGDKGQLGIELVNNQTERGNP 424
           + + GQL +   N   +R  P
Sbjct: 179 SNNAGQLALSGNNAPVQRYKP 199



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 12/209 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V+S+G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 104 QVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 163

Query: 106 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            +  +S +G  + +G ++ G+ A  G         P LV +LK + VV  + G   TAVL
Sbjct: 164 HSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +++G+V+TF   +  +LGH +      P  L+  +E + V QI  G  + LA        
Sbjct: 224 TQDGKVFTFGDNSYGQLGHDSTAEKRGPQ-LVERIEGL-VSQIDCGSYHTLAY------- 274

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            VY+ G  +    G G      HP  + +
Sbjct: 275 -VYTTGQVVSFGRGPGCTRSSPHPEALAE 302



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 28/309 (9%)

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           +G   ++L+   G V + G +S G+   G +GT     P+ + +L+ + V   + G   +
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
             +  +GRV+ +   ++ +LG             + TL +I ++Q+A G+ + LAL+   
Sbjct: 60  LAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALS--- 116

Query: 222 SGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
               V+S G    G+LG G     +  P+ +   + + L    VAAG  H+  +   G  
Sbjct: 117 EDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALSLSGTS 174

Query: 281 CTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
             WG    G L   G+        P +V AL  +  + ++ G   T V+++DG V++FG 
Sbjct: 175 FGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGD 234

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTES 396
                LGH++ A+ +G        PQLV   +++   V QI        + HT A +  +
Sbjct: 235 NSYGQLGHDSTAEKRG--------PQLV---ERIEGLVSQIDCG-----SYHTLAYVYTT 278

Query: 397 GKLYAFGAG 405
           G++ +FG G
Sbjct: 279 GQVVSFGRG 287



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 25/259 (9%)

Query: 174 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           S G+++R  LG    P   +P  +   LE + V  ++ G  + LA+ C      V++ G 
Sbjct: 18  SCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCGKEHSLAV-CHKG--RVFAWGA 73

Query: 232 GLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LG G   +    P+ I+   L +++ + VA G +H+  + +DG+V +WG   +G 
Sbjct: 74  ASEGQLGIGELKETTFIPKKIKT--LADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQ 131

Query: 291 LGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
           LG G E   ++ P+ V++L  +    VA G   +F +S  G  + +G   +  L  +   
Sbjct: 132 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSG-- 189

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               N       P LV +LK ++  VV IS         HT  LT+ GK++ FG    GQ
Sbjct: 190 ---NNAPVQRYKPVLVGALKTLS--VVFISCGYE-----HTAVLTQDGKVFTFGDNSYGQ 239

Query: 410 LGIELVNNQTERGNPERVD 428
           LG    ++  E+  P+ V+
Sbjct: 240 LG---HDSTAEKRGPQLVE 255



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 12/174 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSN++GQL   G+    + ++P  + +L+ + ++  + 
Sbjct: 156 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISC 215

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +S+G  + G   T     PQLVE ++ + V Q   G++ T 
Sbjct: 216 GYEHTAVLTQDGKVFTFGDNSYG--QLGHDSTAEKRGPQLVERIEGL-VSQIDCGSYHTL 272

Query: 162 AVLSREGRVYTFSWGND-ARLGHH----TEPNDVEPHPLLGTLENIPVVQIAAG 210
           A +   G+V +F  G    R   H     E +DV        LE++ V  I AG
Sbjct: 273 AYVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAG 326


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +  SG LGHG     W P+ +   LQG+ I   + G   T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHT 427

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L++ AG+++ FG  +FG   +G + +  ++ P+ VESLK +  V+AA G + TA +   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEV 485

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                    +  G+++T+  G+  RLGH  +   + P   +  L      Q+A G+   +
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP-TCVAALVEPNFCQVACGHSLTV 544

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   +Y++G  + G+LG+  + D K P  +E  +L       +A GA+H AV+ 
Sbjct: 545 ALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKSFVEELACGAYHVAVLT 599

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V+AL D +   +A G   T  +
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S+  + +   A G     L++  G+V+++G++  G   +G  G      P+L+++
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHG--GDSDAHHPKLIDA 356

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N+ +   A G + T  ++  G +YT  WG    N   LGH  + +   P  + G L+ 
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYT--WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + +  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 415 LHISSISCGPWHT---ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES--LKGLRT 469

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALV 529

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G +Y+ G      LG N  ADG+         P  V    
Sbjct: 530 EPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NPQADGK--------LPARV---- 576

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  S    +   A H   LT   ++Y +G G  G+LG
Sbjct: 577 ---EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 147/307 (47%), Gaps = 38/307 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
           P+ +ES+  + V   A GN   A+++++G V  FSWG +   RLGH  + +   P  L+ 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N+ +  +A G  +  A+      +  +  G    G LGHG       P+ +    L 
Sbjct: 356 ALSNLNIELVACGEYHTCAVTLS-GDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-PLQ 413

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            L    ++ G WH A+V   G++ T+G G +G LGHG+ +  S+P+ V++L  ++ +  A
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAA 473

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ A  L P  V
Sbjct: 474 CGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTCV 525

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 526 AALVEPN--FCQVACGHSL-----TVALTNSGHIYTMGSPVYGQLG----NPQADGKLPA 574

Query: 426 RVDIDLS 432
           RV+  LS
Sbjct: 575 RVEGKLS 581



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 423 GPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  +LV  P  V +L      Q A G+
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGH 540

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G +YT       +LG + + +   P  + G L    V ++A G  ++  L 
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLT 599

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHGS  D   P L+E  +   ++ +       AA   H  V
Sbjct: 600 ---SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 656

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 657 SGVDQSMCS 665



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           S+ D   P+ +E   +L++Q +  A G  HAA+V + G V +WG    G LGHG +    
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 358
            PK++ AL+++    VA G+Y T  V+  GD+Y++G G   S  LGH     G+   H  
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-----GKDVSH-- 402

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              P+ VT   Q     + IS  +   W  HT  +T +GKL+ FG G  G LG
Sbjct: 403 -WVPKRVTGPLQ----GLHISSISCGPW--HTALVTSAGKLFTFGDGTFGVLG 448


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 170/356 (47%), Gaps = 25/356 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           +Y++G +  GQ G G  +    P P+++LQG  ++ AA G+  +  ++  G++Y  G + 
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98

Query: 124 FGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
               + GV+G ++   P  V +L+  N+  V    G+    V       +  +WG++   
Sbjct: 99  --ARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVV----DNGHLAAWGSNEYG 152

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LG            +L  +      ++AAG  + LAL    S   VYS G G  G LGH
Sbjct: 153 QLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALT---SSGQVYSFGEGSFGALGH 209

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G   +   P L++      +  V +AAG + +A V   GRV TWG  +YG LG+G     
Sbjct: 210 GDVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNA 267

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            +P+ V  +   +A+ VA GD+    ++  G+VY++G   S  LG  +   G    +  +
Sbjct: 268 FLPQPVPGIE--QAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNL-GSEALNGCL 324

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            +P  V SL   ++ + Q+S         H+F ++   +L+  GA D+GQL ++ V
Sbjct: 325 CSPSRVDSL--ADQSIRQVSAGAR-----HSFFVSPGEQLWGAGANDEGQLALQSV 373



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 136/309 (44%), Gaps = 16/309 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            A  G  +S  VT  G +Y+ GSN + QLG    E    P  + +L+   +   A G G 
Sbjct: 74  HAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGH 133

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
            + + D G + A+G + +G+   G  G      P++++ ++     + A G   +  L+ 
Sbjct: 134 MLAVVDNGHLAAWGSNEYGQLGTGEVGAS-AAQPRVLKRIRGAHFARVAAGATHSLALTS 192

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G+VY+F  G+   LGH    N  +P  L+  L    +V IAAG  +  A++   SG  V
Sbjct: 193 SGQVYSFGEGSFGALGHGDVNNRAKPT-LVQALWPEAIVSIAAGEYFSAAVSL--SGR-V 248

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++ G    G+LG+G   +   P+ +   +    Q V VA G  H   + + G V TWG  
Sbjct: 249 FTWGRNKYGQLGNGEFGNAFLPQPVPGIE----QAVQVACGDHHCIALTRWGEVYTWGLH 304

Query: 287 RYGCLGHGN-------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
             G LG G+         C   P  V +L D     V+ G   +F VS    ++  G  +
Sbjct: 305 SSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGAND 364

Query: 340 SASLGHNAI 348
              L   ++
Sbjct: 365 EGQLALQSV 373



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 38/177 (21%)

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG    G  G G ++  + P+ VQAL     +H A G Y +  V+ DG++Y+ G  ++ 
Sbjct: 41  TWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDAR 100

Query: 342 SLGH--------------------NAIADGQG----------------NRHANVLTPQLV 365
            LG                     + +A GQG                N +  + T ++ 
Sbjct: 101 QLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160

Query: 366 TSLKQ--VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            S  Q  V +R+             H+ ALT SG++Y+FG G  G LG   VNN+ +
Sbjct: 161 ASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAK 217



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWR-----PRPIRSLQGIRIIQ 99
           Q   G  H IA+T  G VY++G +SSGQLG G+    E        P  + SL    I Q
Sbjct: 281 QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQ 340

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA-AIGN 158
            +AGA  +  +S   Q++  G +   E +  +Q    V  P  V  L  + +  A A G+
Sbjct: 341 VSAGARHSFFVSPGEQLWGAGAND--EGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGD 398

Query: 159 FFTAVL 164
              AVL
Sbjct: 399 HSIAVL 404


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L+S  G++Y++G++S G   +GV     V  P+L+++
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCD--VAHPKLIDA 361

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  L G LE 
Sbjct: 362 LTHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  + + +    S   +++ G G  G LGHG R     P+ +E   L  L+ 
Sbjct: 420 IHVSSISCGPFHTVIVT---SAGQLFTFGDGSFGVLGHGDRESLSVPKEVE--SLKGLRT 474

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 475 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALV 534

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G         +A+    GN  A+ + P  V    
Sbjct: 535 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGMLPARV---- 581

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 582 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 621



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 150/355 (42%), Gaps = 37/355 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H++ VTS G +++FG  S G LGHG  E    P+ + SL+G+R ++AA G   T  +
Sbjct: 428 GPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAV 487

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + ++LV  P  V +L      Q A G+
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGH 545

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 546 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLT 604

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG+  D+  P L+E  +   ++ VV      AA   H  +
Sbjct: 605 ---SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAICIHKWI 661

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+           R+ C       C S       K   A N  K   V    Y
Sbjct: 662 SGVDQSMCSGCRQPFNLRRKRHNCYNCALIFCHSCSSKKSLKASLAPNPSKPYRVCDSCY 721

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNER 374
           +      + D+YS     +   G +   D      +N    ++  + S K ++ R
Sbjct: 722 SKLTKGLETDMYSSAKRGAVVQGFSDTVDEDTETRSNAQLSRMSSIDSFKHMDSR 776



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 147/341 (43%), Gaps = 71/341 (20%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  V+ +G +YS+G  S G+LGHG   +   P+ I +L  + I   A G   T  +
Sbjct: 321 GGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAV 380

Query: 111 SDAGQVYAFGKD------------------------------------------------ 122
           + +G +Y +G                                                  
Sbjct: 381 TLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFHTVIVTSAGQ 440

Query: 123 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 165
             +FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +             
Sbjct: 441 LFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNC 500

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G+++T+  G+  RLGH  + + + P   +  L      Q+A G+C  +AL    +   
Sbjct: 501 SSGKIFTWGDGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 556

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY++G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG 
Sbjct: 557 VYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 614

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G  G LGHGN + ++ P +V+AL D +  +V  G   T  +
Sbjct: 615 GANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAI 655


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 22/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G+ +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 429

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  +FG   +G +  K V+ P+ VESLK +  V+AA G + TA +   
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEV 487

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P  +          Q+A G+   +
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTV 547

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL  +     VY++G  + G+LG   + D K P  +E ++L       +A GA+H AV+ 
Sbjct: 548 ALTTKGH---VYTMGSPVYGQLGI-PQADGKLPICVE-WKLSESFVEEIACGAYHVAVLT 602

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V+AL D     +A G   T  +
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAI 653



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 150/345 (43%), Gaps = 45/345 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+++++G+++ G   +GV     V  P+L+E+
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSD--VLHPKLIEA 358

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L N  +   A G + T  ++  G +YT  WGN       LGH  + +   P  + G LE 
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYT--WGNGTYNCGLLGHGNQVSHWVPKRVNGPLEG 416

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 417 IHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 471

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E + VP  V AL 
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV-ALV 530

Query: 310 DVKA--IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
           +VK     VA G   T  ++  G VY+ G      LG                 PQ    
Sbjct: 531 NVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG----------------IPQADGK 574

Query: 368 LKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
           L    E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 575 LPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 41/291 (14%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G    A+++++G +  FSWG +A  RLGH  + + + P  L+ 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEI--FSWGEEAGGRLGHGVDSDVLHPK-LIE 357

Query: 198 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            L N  +  +A G  +  A+         G   Y+  CGL   LGHG++     P+ +  
Sbjct: 358 ALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYN--CGL---LGHGNQVSHWVPKRVNG 412

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
             L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+ V++L  ++ 
Sbjct: 413 -PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRT 471

Query: 314 IHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           +  A G + T  V E             G ++++G G+   LGH       G++ A  L 
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAK-LV 523

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           P  V +L  V     Q++  +S+     T ALT  G +Y  G+   GQLGI
Sbjct: 524 PTRV-ALVNVKPNFCQVACGHSL-----TVALTTKGHVYTMGSPVYGQLGI 568



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 22/249 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 425 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAV 484

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV +   + ++K  F  Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNF-CQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+ +G VYT       +LG   + +   P  +   L    V +IA G  ++  L 
Sbjct: 544 SLTVALTTKGHVYTMGSPVYGQLG-IPQADGKLPICVEWKLSESFVEEIACGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +  +++ +       AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGVDQSMCS 668



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 14/172 (8%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G + D   P+ +E   +L++Q +  A G  HAA+V + G + +WG    G LGHG +   
Sbjct: 293 GVKMDSLFPKSLESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV 350

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             PK+++AL++     VA G+Y T  V+  GD+Y++G G      +N    G GN+ ++ 
Sbjct: 351 LHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGT-----YNCGLLGHGNQVSHW 405

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 406 VPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGTFGALG 450



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 14/124 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE------EEWRPRPIRSLQGIRIIQA 100
           Q   G   ++A+T+KG VY+ GS   GQLG    +       EW+      L    + + 
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWK------LSESFVEEI 591

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A GA    +++   +VY +GK + G   +G   T    +P LVE+LK+  V   A G  F
Sbjct: 592 ACGAYHVAVLTSRTEVYTWGKGANGRLGHG--DTDDRNTPTLVEALKDKDVKSIACGTNF 649

Query: 161 TAVL 164
           TA +
Sbjct: 650 TAAI 653


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 22/283 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G   +++G LG+GT    W P+ I   L+G+++   A G   T
Sbjct: 297 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHT 356

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LIS  GQ++ FG  +FG   +G + +  ++ P+ V+SL  +  +  A G + TA +   
Sbjct: 357 ALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEV 414

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   + 
Sbjct: 415 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSITIG 473

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V++VG  + G+LG+    D K P L+E  +LL      VA GA+H  V+  
Sbjct: 474 LTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTS 528

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
              V TWG G  G LGHG+ E    P +V++L D     +A G
Sbjct: 529 KNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 571



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 148/318 (46%), Gaps = 35/318 (11%)

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           + +++  G+V+ +G+++ G    G+   K VT P+LVE+L    V   A G F T  ++ 
Sbjct: 249 SAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 167 EGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G +YT+  G  N   LG+ T+ +   P  + G LE + V  +A G  +   ++   S  
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALIS---STG 363

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 276
            +++ G G  G LGHG +    +PR ++   L  L+ + VA G WH A V +        
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDS--LTGLRTIAVACGVWHTAAVVEVIMTQSST 421

Query: 277 ---DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
               G++ TWG G    LGHG++E    P  V AL D     +A G   T  ++  G V+
Sbjct: 422 SIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVF 481

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           + G      LG         N HA+   P LV   K + E   +++     Y   H   L
Sbjct: 482 TVGSSVYGQLG---------NPHADGKQPCLVED-KLLGESAEEVAC--GAY---HVMVL 526

Query: 394 TESGKLYAFGAGDKGQLG 411
           T   ++Y +G G  G+LG
Sbjct: 527 TSKNEVYTWGKGANGRLG 544



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 19/235 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  ++S G +++FG  + G LGHG       PR + SL G+R I  A G   T  +
Sbjct: 352 GPWHTALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAV 411

Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +           +G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 412 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDYNFHKIACGHS 469

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  L+  G+V+T       +LG +   +  +P  +   L      ++A G  +++ L  
Sbjct: 470 ITIGLTTSGQVFTVGSSVYGQLG-NPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLT- 527

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P L+E  +  +++  ++A G+ ++A +
Sbjct: 528 --SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVK--IIACGSNYSAAI 578



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 12/142 (8%)

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H+A+V + G V TWG    G LG G  +  + P++V+AL       VA G++ T  V+ D
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G++Y++G G      HNA   G G   ++ + P+ ++ + +     +Q++      W  H
Sbjct: 308 GELYTWGDGV-----HNAGLLGNGTDVSHWM-PKRISGILE----GLQVAYVACGPW--H 355

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T  ++ +G+L+ FG G  G LG
Sbjct: 356 TALISSTGQLFTFGDGTFGVLG 377



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           E+++ +A G  H + +TSK  VY++G  ++G+LGHG  E+   P  + SL+   +   A 
Sbjct: 511 ESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 570

Query: 103 GAGRTMLI 110
           G+  +  I
Sbjct: 571 GSNYSAAI 578


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 26/294 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +++ G LGHG+    W P+ +   ++GIR+   + GA  T
Sbjct: 350 GEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHT 409

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---- 163
            +++ AGQ++ FG  SFG   +G   T     P+ VE+L+ +   + A G + TA     
Sbjct: 410 AVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEA 467

Query: 164 ---LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
              LS  G        ++YT+  G+  RLGH      + P  +   +E   + Q+A G  
Sbjct: 468 INELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE-RICQVACGND 526

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
             +AL    +   VY++G    G+LG  +  + K P  +E  ++ N     VA G++H A
Sbjct: 527 LTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EIANSFVEEVACGSYHVA 581

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           V+     V TWG G  G LGHG+    + P +V  L D +  +VA G   T V+
Sbjct: 582 VLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 42/361 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+++++G++S G   +GV+    V+ P+++++
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDT 338

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G + T  ++  G +YT+  G  N   LGH +E +   P  + G +E I 
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIR 398

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  I+ G  +   +    S   +++ G G  G LGHG       PR +E   L  L+   
Sbjct: 399 VSYISCGAWHTAVVT---SAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTK 453

Query: 264 VAAGAWHAAVVGQ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           VA G WH A   +                 ++ TWG G  G LGHG+ E   VP+ V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            + +   VA G+  T  ++  G VY+ G      LG +A A+G+         P  V   
Sbjct: 514 MEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGK--------LPTCVEG- 563

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           +  N  V +++       + H   LT   ++Y +G G  GQLG     +   R  P  VD
Sbjct: 564 EIANSFVEEVACG-----SYHVAVLTSKNEVYTWGKGLNGQLGH---GDNNHRNTPTIVD 615

Query: 429 I 429
           +
Sbjct: 616 V 616



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 154/344 (44%), Gaps = 46/344 (13%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT +G ++S+G  S G+LGHG   +   P+ I +L G  +   A G   T  +
Sbjct: 298 GGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQAAIGNFFTAVLSR 166
           + +G +Y +G    G   YG+ G     S   PQ V   ++ I V   + G + TAV++ 
Sbjct: 358 TLSGDLYTWGD---GTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTS 414

Query: 167 EGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 216
            G+++TF  G+   LGH        P +VE      TL  +   ++A G  +  A     
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVE------TLRGLRTTKVACGVWHTAAAVEAI 468

Query: 217 -------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAG 267
                   +  PS   +Y+ G G  G+LGHG    +  PRL+ +    L+  +   VA G
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHG----DNEPRLVPECVAALMEERICQVACG 524

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 326
                 +   GRV T G   YG LG      + +P  V+  + +     VA G Y   V+
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVL 583

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           +   +VY++G G +  LGH        N H N  TP +V  LK 
Sbjct: 584 TSKNEVYTWGKGLNGQLGHG------DNNHRN--TPTIVDVLKD 619



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           +G +    S+ D   P+ +E   +L++  +  A G  HA +V + G + +WG    G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           HG E   S PK++  L+      VA G+Y T  V+  GD+Y++G G      HN    G 
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGT-----HNYGLLGH 378

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           G+  ++ + PQ V+   +     +++S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 379 GSEVSHWI-PQKVSGQME----GIRVSYISCGAW--HTAVVTSAGQLFTFGDGSFGALG 430



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS + GQLG  T   +        +    + + A G+  
Sbjct: 520 QVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYH 579

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK   G+  +G    +   +P +V+ LK+  V   A G+ FT V+
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHR--NTPTIVDVLKDKQVKNVACGSKFTVVI 635


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 176/376 (46%), Gaps = 47/376 (12%)

Query: 58  VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + S G VY +G   + G L  GT   E        PRP+ S   + + Q   G     L+
Sbjct: 216 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 275

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G+V+ +G++  G   +G+Q    ++ P+LVE L    +   A G + T V+S  G +
Sbjct: 276 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 333

Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             FSWG    N   LGH ++ +   P  + G LE + V+ +A G  +  ALA   +   +
Sbjct: 334 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 388

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
           ++ G G  G LGHG+R    +P+   + Q LN L+ V VA   WH A    V+GQ     
Sbjct: 389 FTFGDGAFGVLGHGNRESVSYPK---EVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSM 445

Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
              ++ TWG G    LGHGN+E   +P  V +L D     +A G   T  ++  G V++ 
Sbjct: 446 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 505

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G      LG N+I+DG+         P LV   + V E V +I+         H   LT 
Sbjct: 506 GGTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIACGAH-----HVAVLTS 550

Query: 396 SGKLYAFGAGDKGQLG 411
             +++ +G G  G+LG
Sbjct: 551 RSEVFTWGKGANGRLG 566



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 25/275 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+  V++ G ++S+G   ++ G LGHG+    W P+ +   L+G++++  A G   +
Sbjct: 320 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 379

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA------------ 155
            L +  G+++ FG  +FG   +G + +  V+ P+ V+SL  +  V+ A            
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 437

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           +G   T++ SR  +++T+  G+  RLGH  +   + P   + +L +    +IA G+ + +
Sbjct: 438 MGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTV 494

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    SG  V+++G    G+LG+ S +D K P L+ Q +L+      +A GA H AV+ 
Sbjct: 495 ALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGAHHVAVLT 549

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
               V TWG G  G LGHG+ E +  P +V+AL D
Sbjct: 550 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRD 584



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 53  GHS--IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GH+  +A+T+ G V++ G  + GQLG+  ++ +        L G  + + A GA    ++
Sbjct: 489 GHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVL 548

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           +   +V+ +GK + G   +G   T+   +P LVE+L++  V   + G+ FT+ +
Sbjct: 549 TSRSEVFTWGKGANGRLGHG--DTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI 600


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 127/254 (50%), Gaps = 19/254 (7%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---WRPRPIRSLQGIRII 98
           R  +   +  P H+       +VY+ G N++GQLG G  E     WR R  R  +G R+ 
Sbjct: 17  RNRSPPTVDDPAHA-----HHLVYACGYNATGQLGCGDRESRVVPWRVRTSRLGKG-RVD 70

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             A G+  ++++  AGQV + GK+  G+  +G  G    T+P++VE L+ + VV  A   
Sbjct: 71  GVACGSSYSVVVV-AGQVASCGKNVHGQLGHG--GRDEETAPRVVEGLRGVRVVAVAARG 127

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L   GRVY++  G++ +LGH     +  PHP         VV + AG  + LAL 
Sbjct: 128 AHTLALDDRGRVYSWGRGDEGQLGHGA--FEAVPHPRRIARLPTSVVAVGAGRTHSLALD 185

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                 AVYS GCG  G LGHG R  +  PR +E F+        V+ G+ H AVV  DG
Sbjct: 186 AD---GAVYSWGCGDDGALGHGDRRRQLAPRAVEFFK--TRPAAAVSCGSRHNAVVTADG 240

Query: 279 RVCTWGWGRYGCLG 292
            + TWGW  YG  G
Sbjct: 241 ALVTWGWAAYGQCG 254



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 17/186 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G    G+LG G R     P  +   +L   +   VA G+ ++ VV   G+V + G 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVV-VAGQVASCGK 92

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             +G LGHG  + E+ P+VV+ L  V+ + VA     T  + + G VYS+G G+   LGH
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGH 152

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            A           V  P+ +  L      VV +    +     H+ AL   G +Y++G G
Sbjct: 153 GAFE--------AVPHPRRIARLP---TSVVAVGAGRT-----HSLALDADGAVYSWGCG 196

Query: 406 DKGQLG 411
           D G LG
Sbjct: 197 DDGALG 202



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 13/221 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G VYS+G    G LGHG    +  PR +   +       + G+    +
Sbjct: 176 AGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAV 235

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G +  +G  ++G+      G  L  +   +        V AA G   T   +R   
Sbjct: 236 VTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHAS 295

Query: 170 ---VYTFSWGNDARLGHHT----EPNDVEPHPLLGTLE---NIPVVQIAAGYCYLLALAC 219
              ++ F W    + G  T     P  V     LG+ E      V  ++AG  + +    
Sbjct: 296 GDAIWAFGWNAYGQCGGSTCSAAAPRRVGGK-FLGSQEGGDGAVVEALSAGGRHSVCCVR 354

Query: 220 QP-SGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLN 258
            P  G A Y+ G G  G+LG G R D + +PR+      +N
Sbjct: 355 LPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVN 395


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 23/288 (7%)

Query: 54  HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
           H+ AVT  G +YS+G  +++ G LGHG     W P+ +   L+G+R+   A G   T L+
Sbjct: 375 HACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALV 434

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
           +  G ++ FG  +FG    G    K   SP+ VESLK +  V+AA G + TA +      
Sbjct: 435 TTTGLLFTFGDGTFGV--LGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 492

Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
                    G+++T+  G   RLGH  +   + P   +  L +    Q+A GY   +AL 
Sbjct: 493 SSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPT-CVAALVDHNFRQVACGYSLTVALT 551

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            +     V+++G    G+LG   + D K P L+E  +L+      +A GA H AV+  + 
Sbjct: 552 TK---GGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVLTHNS 606

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            V TWG G  G LGHG+ E  + P +V+AL + +   +A G   T  +
Sbjct: 607 EVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAI 654



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 154/342 (45%), Gaps = 40/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +   A G     L++  G+V+ +G++S G   +GV     V+ PQLVE+
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 360

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L +      A G +    ++  G +Y  SWG    N   LGH  + +   P  + G LE 
Sbjct: 361 LASSTTEVVACGEYHACAVTLSGDLY--SWGDGTHNLGLLGHGNDISHWIPKRVNGPLEG 418

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V  IA G  +   +    +G+ +++ G G  G LGH  R     PR +E   L  L+ 
Sbjct: 419 LRVASIACGPWHTALVTT--TGL-LFTFGDGTFGVLGHNDRKSAYSPREVE--SLKGLRT 473

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 474 VRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALV 533

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D     VA G   T  ++  G V++ G      LG +  ADG+         P LV    
Sbjct: 534 DHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLG-DPQADGK--------LPGLVEG-- 582

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               ++V+  + +      H   LT + ++Y +G G  G+LG
Sbjct: 583 ----KLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLG 620



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VT+ G++++FG  + G LGH   +  + PR + SL+G+R ++AA G   T  +
Sbjct: 427 GPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAV 486

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G    G   +G +  +LV  P  V +L +    Q A G 
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV--PTCVAALVDHNFRQVACGY 544

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+ +G V+T       +LG   + +   P  + G L    V  IA G  ++  L 
Sbjct: 545 SLTVALTTKGGVFTMGSSTYGQLG-DPQADGKLPGLVEGKLVEAYVEDIACGAHHVAVLT 603

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
                  VY+ G G  G+LGHG   D   P L+E  +   ++ +       AA   H  +
Sbjct: 604 ---HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAICLHKWL 660

Query: 274 VGQDGRVCT 282
            G D   C+
Sbjct: 661 SGADQNACS 669


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 153/346 (44%), Gaps = 48/346 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L+++
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 403

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L N+ +   A G + T  ++  G +YT+  G  N   LGH  E +   P  + G LE I 
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 463

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E  +   L+ V 
Sbjct: 464 VSAISCGPWHTAIVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 518

Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL + 
Sbjct: 519 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 578

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLV 365
               +A G   T  ++  G VY+ G      LG N  ADG      +G  H N       
Sbjct: 579 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF------ 631

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    V +IS     Y   H   LT   ++Y +G G  G+LG
Sbjct: 632 ---------VEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 663



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 150/359 (41%), Gaps = 39/359 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 470 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 529

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + T+LV  P  V +L      Q A G+
Sbjct: 530 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 587

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 588 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 646

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ VV      AA   H  V
Sbjct: 647 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAICIHKWV 703

Query: 274 VGQDGRVCT-------WGWGRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGD 320
            G D  +C+           R+ C        H     +S+ K   A N  K   V    
Sbjct: 704 SGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSL-KASLAPNPNKPYRVCDSC 762

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQ 377
           Y+      + D YS     S   G N   D +    +N    +L  + S K ++ R  +
Sbjct: 763 YSKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSK 821



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 402

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 403 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 460

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 461 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 520

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 521 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 572

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 573 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 621

Query: 426 RVD 428
           RV+
Sbjct: 622 RVE 624



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 144/331 (43%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I +L  + I   A G   T  ++ +
Sbjct: 366 HATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLS 425

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 426 GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFT 485

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 486 FGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 545

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P  +   +E     QIA G+C  +AL    SG  VY+
Sbjct: 546 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPN-FCQIACGHCMTVALTT--SGH-VYT 601

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 602 MGSPVYGQLGN-PQADGMLPVRVEGKLHKNFV-EEISCGAYHVAVLTSRTEVYTWGKGAN 659

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ +  S P +V++L D +   V  G
Sbjct: 660 GRLGHGDTDDRSSPTLVESLKDKQVRTVVCG 690


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 23/284 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHT 468

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  V+AA G + TA +   
Sbjct: 469 AVVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEV 526

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P  +   +E     Q+A G+C  +
Sbjct: 527 MAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP-NFCQVACGHCLTV 585

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   VY++G  + G+LG+ ++ D   P  +E     N    + + GA+H AV+ 
Sbjct: 586 ALT---TSGHVYTMGSAVYGQLGN-AQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 640

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
               V TWG G  G LGHG+ + ++ P +V+AL D +   V  G
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCG 684



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 154/348 (44%), Gaps = 52/348 (14%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V+ P+L+++
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 397

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 398 LSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E  +   L+ 
Sbjct: 456 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRESISVPREVESLK--GLRT 510

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++  + VP  V AL 
Sbjct: 511 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALV 570

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQ 363
           +     VA G   T  ++  G VY+ G      LG NA ADG      +G  H N     
Sbjct: 571 EPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLHKNF---- 625

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                      V +IS         H   LT   ++Y +G G  G+LG
Sbjct: 626 -----------VEEISCG-----AYHVAVLTSKTEVYTWGKGANGRLG 657



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  E    PR + SL+G+R ++AA G   T  +
Sbjct: 464 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 523

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +G KLV  P  V +L      Q A G+
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLV--PTCVAALVEPNFCQVACGH 581

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 582 CLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 640

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 641 ---SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIHKWV 697

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 698 SGVDQSMCS 706



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  +  DV    L+ 
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVD-CDVSQPKLID 396

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 397 ALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDISHWVPKHVNG-PLE 454

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH AVV   G++ T+G G +G LGHG+ E  SVP+ V++L  ++ +  A
Sbjct: 455 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 514

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 515 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKGPK-LVPTCV 566

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 567 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NAQADGMLPV 615

Query: 426 RVD 428
           RV+
Sbjct: 616 RVE 618


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 145/272 (53%), Gaps = 10/272 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKD 122
           V+S+G    GQLG G T ++  P  + +L+G+ II     G+  T  ++  G +Y +G  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            +G+  +G +     ++P+ VE+L  + +V  A G+  TAV++ +G +YT+    +   G
Sbjct: 61  MYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAG 118

Query: 183 H-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           H  TE +   P  LL  L    VVQ++A  C     AC       ++ G G  G+LG+G+
Sbjct: 119 HGDTEGHQYTP-KLLERLNGKKVVQLSA--CG-FHTACLTDDHETFAWGEGKFGRLGNGT 174

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
             +   PRLIE   L+   P  VA G +H+AV+ +DG++ T+G G +G LGH ++  +  
Sbjct: 175 ERNCHSPRLIE--SLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLK 232

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           P +V+AL+ V    +  G   +  ++ +G+ +
Sbjct: 233 PTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 37/293 (12%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFS 174
           V+++G+    + + G+  T     P  V++L+ +  +     G++ TA ++  G +YT+ 
Sbjct: 1   VFSWGRGE--DGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58

Query: 175 WGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            G   +LGH     H+ P  VE       L  + +V IA G  +    A   S   +Y+ 
Sbjct: 59  GGMYGKLGHGNESGHSTPRRVEA------LVGLSIVDIACGSRHT---AVVTSKGCLYTW 109

Query: 230 GCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
           G    G  GHG     ++ P+L+E+   LN + VV ++A  +H A +  D     WG G+
Sbjct: 110 GDKENGVAGHGDTEGHQYTPKLLER---LNGKKVVQLSACGFHTACLTDDHETFAWGEGK 166

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G LG+G E     P+++++L       VA G + + V++ DG +Y+FG GE   LGH  
Sbjct: 167 FGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH-- 224

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
            AD       N L P LV +L  V   V QI+      W +H+ ALT  G+ +
Sbjct: 225 -AD-----KVNKLKPTLVEALDGV--VVKQITCG----W-SHSVALTSEGEYH 264



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 20/196 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G G  G+LG G  +D+  P  ++  + + +    V  G++H A V  +G + TWG 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGI-ITHVTCGSYHTAAVASNGDLYTWGG 59

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G YG LGHGNE   S P+ V+AL  +  + +A G   T VV+  G +Y++G  E+   GH
Sbjct: 60  GMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               D +G+++    TP+L+  L    ++VVQ+S         HT  LT+  + +A+G G
Sbjct: 120 ---GDTEGHQY----TPKLLERLN--GKKVVQLSAC-----GFHTACLTDDHETFAWGEG 165

Query: 406 DKGQLGIELVNNQTER 421
             G+LG     N TER
Sbjct: 166 KFGRLG-----NGTER 176



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 25/243 (10%)

Query: 173 FSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSV 229
           FSWG   D +LG     +  EP   +  L  + ++  +  G  +  A+A   S   +Y+ 
Sbjct: 2   FSWGRGEDGQLGIGDTSDQDEP-TYVDALRGVGIITHVTCGSYHTAAVA---SNGDLYTW 57

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G G+ GKLGHG+ +    PR +E   L+ L  V +A G+ H AVV   G + TWG    G
Sbjct: 58  GGGMYGKLGHGNESGHSTPRRVEA--LVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENG 115

Query: 290 CLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
             GHG+ E  +  PK+++ LN  K + ++   + T  +++D + +++G G+   LG+   
Sbjct: 116 VAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGT- 174

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                    N  +P+L+ SL  + +   Q++         H+  +T  GK+Y FG G+ G
Sbjct: 175 -------ERNCHSPRLIESL--IGKYPCQVACGG-----FHSAVITRDGKMYTFGGGEHG 220

Query: 409 QLG 411
           QLG
Sbjct: 221 QLG 223



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 7/211 (3%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +    G  H+ AV S G +Y++G    G+LGHG       PR + +L G+ I+  A G+ 
Sbjct: 36  THVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSR 95

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            T +++  G +Y +G    G A +G  +G +   +P+L+E L    VVQ +   F TA L
Sbjct: 96  HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQY--TPKLLERLNGKKVVQLSACGFHTACL 153

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +   + +  G   RLG+ TE N   P  +   +   P  Q+A G  +  A+  +   M
Sbjct: 154 TDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYP-CQVACGG-FHSAVITRDGKM 211

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             Y+ G G  G+LGH  + ++  P L+E   
Sbjct: 212 --YTFGGGEHGQLGHADKVNKLKPTLVEALD 240



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 35/71 (49%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS  +T  G +Y+FG    GQLGH     + +P  + +L G+ + Q   G   
Sbjct: 194 QVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSH 253

Query: 107 TMLISDAGQVY 117
           ++ ++  G+ +
Sbjct: 254 SVALTSEGEYH 264


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 45/382 (11%)

Query: 58  VTSKGVVYSFG---SNSSGQLGHGTTE----EEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + S G VY +G   ++++   GH T+     +   P+P+ S   + + Q   G+    L 
Sbjct: 213 IESLGDVYVWGEVWTDAAPSDGHTTSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHIALT 272

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G+V+ +G++  G   +G      ++ P+LVES+    V   + G F T  +S  G +
Sbjct: 273 TRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVESISVTIVDFISCGEFHTCAISASGDL 330

Query: 171 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             F+WG+ +     LG+ T  +   P  + G LE + V+ +A G  +   +    S   +
Sbjct: 331 --FNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHSALIT---STGRL 385

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------- 276
           Y+ G G  G LGHG+R    +P+ +E   L   + + VA G WH+A + +          
Sbjct: 386 YTFGDGTFGALGHGNRESSAYPKEVEA--LNGFRTIKVACGVWHSAAIVEATVQTGMNMV 443

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             ++ TWG G    LG G++E   +P  VQAL +     +A G   T  ++  G VY+ G
Sbjct: 444 SKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATSGHVYTMG 503

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             ++  LG N  +DG+         P LV   K  +E V +IS        AH   LT  
Sbjct: 504 SSDNGQLG-NPKSDGK--------QPCLVKD-KLAHELVEEISCGA-----AHVAVLTSR 548

Query: 397 GKLYAFGAGDKGQLGIELVNNQ 418
            ++Y +G G  G+LG   +N++
Sbjct: 549 SEVYTWGMGANGRLGHGDLNDK 570



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 22/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+++ G ++++G  S  +G LG+ T    W P+ +   L+G++++  A G+  +
Sbjct: 317 GEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHS 376

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            LI+  G++Y FG  +FG   +G + +     P+ VE+L     ++ A G + +A +   
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAY--PKEVEALNGFRTIKVACGVWHSAAIVEA 434

Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                      ++YT+  G+  RLG   +   + P  +   LE+    Q+A G    +AL
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEH-NFHQLACGQNMTVAL 493

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A   SG  VY++G    G+LG+  ++D K P L++  +L +     ++ GA H AV+   
Sbjct: 494 AT--SGH-VYTMGSSDNGQLGN-PKSDGKQPCLVKD-KLAHELVEEISCGAAHVAVLTSR 548

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
             V TWG G  G LGHG+   +  P +V+AL D     ++ G ++TT +
Sbjct: 549 SEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCI 597



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 30/281 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  +TS G +Y+FG  + G LGHG  E    P+ + +L G R I+ A G   +  I
Sbjct: 372 GSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAI 431

Query: 111 SDA----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +A           ++Y +G         G +  +L+  P  V++L      Q A G   
Sbjct: 432 VEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLI--PTCVQALLEHNFHQLACGQNM 489

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G VYT    ++ +LG + + +  +P  +   L +  V +I+ G  ++  L   
Sbjct: 490 TVALATSGHVYTMGSSDNGQLG-NPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLT-- 546

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
            S   VY+ G G  G+LGHG   D+K P ++E  +  +++ +   +        H  V G
Sbjct: 547 -SRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSG 605

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
            D  VCT       +   R+ C   G   C   S  KV++A
Sbjct: 606 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKA 646


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 17/305 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ +   G VY+ GSNS GQLGH        P  + +L   +I   + G   ++ +
Sbjct: 41  GGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSCGRAHSVAV 98

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           ++ GQV+ +G    G+       T  V  P+L++ L +  + Q   GN     LSR+G++
Sbjct: 99  NEQGQVFVWGAGDGGQLGLETAETA-VRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQL 157

Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVY 227
           +T+   +  +LG    E + + P P + +L  IP+ QI AG  +C+ L+L    SG AV+
Sbjct: 158 FTWGQNSSGQLGLGKGETSKLSPSP-VKSLAGIPLAQITAGGDHCFALSL----SG-AVF 211

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
             G    G+LG   + D   P  I   + L  Q VV ++ G  H A + + G + T+G G
Sbjct: 212 GWGKNKAGQLGLNDKQDRAVPCHI---KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDG 268

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGESASLGH 345
             G LGHG+   E +P+ V  L   +   +  G + T   V   G VY+FGC     LG 
Sbjct: 269 SRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGT 328

Query: 346 NAIAD 350
             +AD
Sbjct: 329 GILAD 333



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 17/286 (5%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 99
           C    SQ + G  H IA++  G ++++G NSSGQLG G  E  +  P P++SL GI + Q
Sbjct: 134 CDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQ 193

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
             AG      +S +G V+ +GK+  G+   G+   +    P  ++ L++  VV  + G+ 
Sbjct: 194 ITAGGDHCFALSLSGAVFGWGKNKAGQL--GLNDKQDRAVPCHIKFLRSQRVVYISCGDE 251

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            TA L++ G ++TF  G+  +LGH +  N++ P  ++  L    V QI  G  + LA   
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM-ELMGTEVSQITCGRHHTLAFV- 309

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQP----VVVAAGAWHAAVV 274
            PS   VY+ GC   G+LG G   D + P  ++  F  LNL+     + +  G     V+
Sbjct: 310 -PSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKYTVI 368

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
                +C    G +  L + +E+C  VP+  +  N  K++     D
Sbjct: 369 ---KIICG---GDHSFLMYSSEQCPEVPEDFRVFNVSKSLSPINHD 408



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 27/348 (7%)

Query: 67  FGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           +G+   GQLG G      + PR      G  + + A G   T+ +   G VY  G +S G
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           +  +   G     SP+LV +L    +   + G   +  ++ +G+V+ +  G+  +LG  T
Sbjct: 64  QLGHDKAGN----SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLET 119

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTD 244
               V    LL  L +  + Q+  G  + +AL+       +++ G    G+LG G   T 
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALS---RDGQLFTWGQNSSGQLGLGKGETS 176

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           +  P  ++    + L  +   AG  H   +   G V  WG  + G LG  +++  +VP  
Sbjct: 177 KLSPSPVKSLAGIPLAQI--TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCH 234

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           ++ L   + ++++ GD  T  +++ G +++FG G    LGH     G  N   N L P+ 
Sbjct: 235 IKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGH-----GSSN---NELLPRR 286

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
           V  L  +   V QI+         HT A    SG +YAFG    GQLG
Sbjct: 287 VMEL--MGTEVSQITCGRH-----HTLAFVPSSGTVYAFGCNSHGQLG 327



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 137/305 (44%), Gaps = 29/305 (9%)

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+   GV+G   V  P++        + + A G   T  L ++G VYT    +  +LGH 
Sbjct: 10  GQLGIGVEGNP-VFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHD 68

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRT 243
              N  E   L+G L+   +  ++ G  + +A+  Q     V+  G G GG+LG   + T
Sbjct: 69  KAGNSPE---LVGALDTQKITMVSCGRAHSVAVNEQGQ---VFVWGAGDGGQLGLETAET 122

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-P 302
             + PRL+++    ++  VV   G  H   + +DG++ TWG    G LG G  E   + P
Sbjct: 123 AVRIPRLLKKLCDHSISQVV--CGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSP 180

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
             V++L  +    +  G    F +S  G V+ +G  ++  LG N   D     H   L  
Sbjct: 181 SPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS 240

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
           Q          RVV IS  +      HT ALT+SG L+ FG G +GQLG    NN+    
Sbjct: 241 Q----------RVVYISCGDE-----HTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-- 283

Query: 423 NPERV 427
            P RV
Sbjct: 284 -PRRV 287


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 23/288 (7%)

Query: 54  HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
           H  AVT  G +Y++G  ++S G LGHG     W P+ +   L+ +R+   A G   T ++
Sbjct: 372 HGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVV 431

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
           + AGQ++ FG  +FG    G    +   SP+ VESLK +  V+AA G + TA +      
Sbjct: 432 TTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 489

Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
                    G+++T+  G+  RLGH  +   + P   +  L +    ++A G+   +AL 
Sbjct: 490 SSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAALVDHNFRKVACGHSLTVALT 548

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            +     V+++G  + G+LG   + D K P ++E  +L++     +A GA H A V    
Sbjct: 549 TKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVTLKS 603

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            V TWG G  G LGHG++E  + P +V+AL + +   +A G   T  V
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAV 651



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 157/359 (43%), Gaps = 43/359 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+V+ +G++S G   +GV     V+ PQLVE+
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 357

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L +      A G +    ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 358 LASSTTEVVACGEYHGCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V  IA G  +   +    +   +++ G G  G LGH  R     PR +E  +   L+ 
Sbjct: 416 VRVASIACGPWHTAVVT---TAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLK--GLRT 470

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 471 VRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALV 530

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D     VA G   T  ++  G+V++ G      LG +  ADG+         P +V    
Sbjct: 531 DHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLG-DPQADGK--------LPGMVEG-- 579

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
               R+V   + +      H   +T   ++Y +G G  G+LG     +Q +R  P  V+
Sbjct: 580 ----RLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGH---GDQEDRNTPTLVE 631



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VT+ G +++FG  + G LGH   +  + PR + SL+G+R ++AA G   T  +
Sbjct: 424 GPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  +LV  P  V +L +    + A G+
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGH 541

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+ +G V+T       +LG   + +   P  + G L +  V  IA G  +   +A
Sbjct: 542 SLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMVEGRLVDAYVEDIACGAHH---VA 597

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
           C      VY+ G G  G+LGHG + D   P L+E  +   ++ +       AA   H  +
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWL 657

Query: 274 VGQDGRVCT 282
            G D   C+
Sbjct: 658 SGADQNACS 666



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  Y+         +   SV  G GG +      D   P+ +E   +L++Q   VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAMN----LDAPLPKALESAIVLDVQ--YVACG 317

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             HAA+V + G V TWG    G LGHG +   S P++V+AL       VA G+Y    V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
             GD+Y++G G      H+    G GN  ++ +  ++   L++V  RV  I+      W 
Sbjct: 378 LSGDLYTWGDGT-----HSLGLLGHGNDISHWIPKRVNGPLEEV--RVASIACGP---W- 426

Query: 388 AHTFALTESGKLYAFGAGDKGQLG 411
            HT  +T +G+L+ FG G  G LG
Sbjct: 427 -HTAVVTTAGQLFTFGDGTFGVLG 449


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 176/376 (46%), Gaps = 47/376 (12%)

Query: 58  VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + S G VY +G   + G L  GT   E        PRP+ S   + + Q   G     L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G+V+ +G++  G   +G+Q    ++ P+LVE L    +   A G + T V+S  G +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324

Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             FSWG    N   LGH ++ +   P  + G LE + V+ +A G  +  ALA   +   +
Sbjct: 325 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 379

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
           ++ G G  G LGHG+R    +P+   + Q LN L+ V VA   WH A    V+GQ     
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPK---EVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSM 436

Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
              ++ TWG G    LGHGN+E   +P  V +L D     +A G   T  ++  G V++ 
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 496

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G      LG N+I+DG+         P LV   + V E V +I+         H   LT 
Sbjct: 497 GGTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIACGAH-----HVAVLTS 541

Query: 396 SGKLYAFGAGDKGQLG 411
             +++ +G G  G+LG
Sbjct: 542 RSEVFTWGKGANGRLG 557



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 25/275 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+  V++ G ++S+G   ++ G LGHG+    W P+ +   L+G++++  A G   +
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 370

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA------------ 155
            L +  G+++ FG  +FG   +G + +  V+ P+ V+SL  +  V+ A            
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 428

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           +G   T++ SR  +++T+  G+  RLGH  +   + P   + +L +    +IA G+ + +
Sbjct: 429 MGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTV 485

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    SG  V+++G    G+LG+ S +D K P L+ Q +L+      +A GA H AV+ 
Sbjct: 486 ALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGAHHVAVLT 540

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
               V TWG G  G LGHG+ E +  P +V+AL D
Sbjct: 541 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRD 575



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 53  GHS--IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GH+  +A+T+ G V++ G  + GQLG+  ++ +        L G  + + A GA    ++
Sbjct: 480 GHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVL 539

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           +   +V+ +GK + G   +G   T+   +P LVE+L++  V   + G+ FT+ +
Sbjct: 540 TSRSEVFTWGKGANGRLGHG--DTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI 591


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 167/325 (51%), Gaps = 31/325 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +G  H++ + + G V+S GSN +G+LG G  +E  +   P+     +RIIQ +AG   +M
Sbjct: 54  SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSM 113

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +SD G+++A+G +S G  +  + G  L++ +P+ V SL     VQ A G   T  L+  
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGG 169

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           GRV+ +   +D R+ H   P +VE         ++P++QI+AG  + +AL    SG  ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNLFTMALTA--SG-TLF 218

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+ +  D  +PR +     +    VVV  G  H+  +  +GRV + G   
Sbjct: 219 AWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSIALTHEGRVFSCGSDS 274

Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           +G LG G     ++  + +  +       +A G   T VV+ +G +++FG   +  LGH 
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH- 332

Query: 347 AIADGQGNRHANVLTPQLVTSLKQV 371
                 GN   N +TP+++ S++ V
Sbjct: 333 ------GNTR-NQITPRMIDSVENV 350



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 27/301 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q  AG  HS+AV+  G ++++GSNS GQL   G       P+ + SL     +Q A GA 
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP--ETVQVACGAS 161

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ ++  G+V+ +G+ S G   +         SP  VE   ++ ++Q + GN FT  L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVELFVSVPIIQISAGNLFTMALT 212

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 224
             G ++ +    + +LG+ T  + + P      + NI  VV +  G  + +AL  +    
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR----EVPNINSVVVVECGDSHSIALTHEGR-- 266

Query: 225 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            V+S G    G+LG G  SR+      + E   +L      +A G  H  VV  +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPSRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           +G    G LGHGN   +  P+++ ++ +V ++  A  D +  +       Y    G S+S
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRMIDSVENVASV-FAGWDQSFCLQIRTKHAYEVLSGPSSS 380

Query: 343 L 343
           L
Sbjct: 381 L 381



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 41/339 (12%)

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIF 150
            G+ +   A+G   T+ +++ G+V++ G +  GE   G   +G+  +    +  +++   
Sbjct: 45  HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--- 101

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 209
           ++Q + G   +  +S +GR+  F+WG+++  G      D+        + ++P  VQ+A 
Sbjct: 102 IIQISAGRSHSMAVSDDGRL--FAWGSNSH-GQLAMSGDILISDTPKRVPSLPETVQVAC 158

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  + ++L     G  V+  G    G++ H        P  +E F  +++  + ++AG  
Sbjct: 159 GASHTVSLN---GGGRVFIWGQQSDGRIRHS-------PAEVELF--VSVPIIQISAGNL 206

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
               +   G +  WG    G LG+        P+ V  +N V  + V  GD  +  ++ +
Sbjct: 207 FTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSV--VVVECGDSHSIALTHE 264

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G V+S G      LG      GQ +R  N +    +T +  +   V +I+         H
Sbjct: 265 GRVFSCGSDSFGQLGC-----GQPSRSQNCMRG--ITEM--LGSHVTRIACGR-----CH 310

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           T  +  +GK++ FG    GQLG     NQ     P  +D
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQI---TPRMID 345



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 50/311 (16%)

Query: 115 QVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 166
           Q+Y FG  S G+  +         +++  P LV         + V   A G   T  L+ 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64

Query: 167 EGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +G+V++     +  LG    +      +P+  +   + ++QI+AG  + +A++       
Sbjct: 65  DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQISAGRSHSMAVS---DDGR 120

Query: 226 VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           +++ G    G+L        S T ++ P L E  Q        VA GA H   +   GRV
Sbjct: 121 LFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ--------VACGASHTVSLNGGGRV 172

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             WG    G + H        P  V+    V  I ++ G+  T  ++  G ++++G  E 
Sbjct: 173 FIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEE 225

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LG+        NR  +V+ P+ V ++  V   VV+         ++H+ ALT  G+++
Sbjct: 226 GQLGNFT------NR--DVINPREVPNINSV--VVVECG-------DSHSIALTHEGRVF 268

Query: 401 AFGAGDKGQLG 411
           + G+   GQLG
Sbjct: 269 SCGSDSFGQLG 279



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 47/272 (17%)

Query: 169 RVYTFSWGNDARLGHHTEP--NDVE----PHPLLGT---LENIPVVQIAAGYCYLLALAC 219
           ++Y F   +D +L        ND +    PH + G       + V  +A+G  + L LA 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA- 63

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQDG 278
             +   V+S G    G+LG G   +  +   I    + N ++ + ++AG  H+  V  DG
Sbjct: 64  --NDGKVWSCGSNYNGELGRGGVKEGSYT--IYPVHISNAVRIIQISAGRSHSMAVSDDG 119

Query: 279 RVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           R+  WG   +G L   G+      PK V +L +   + VA G   T  ++  G V+ +G 
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ 177

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
                + H               +P  V     V+  ++QIS  N       T ALT SG
Sbjct: 178 QSDGRIRH---------------SPAEVELF--VSVPIIQISAGN-----LFTMALTASG 215

Query: 398 KLYAFGAGDKGQLGIELVNNQTERG--NPERV 427
            L+A+G  ++GQLG     N T R   NP  V
Sbjct: 216 TLFAWGRNEEGQLG-----NFTNRDVINPREV 242



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 21/124 (16%)

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           VKA  VA+G+  T  ++ DG V+S G   +  LG   + +G     +  + P  +++   
Sbjct: 49  VKA--VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-----SYTIYPVHISNAV- 100

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE---LVNNQTER--GNPE 425
              R++QIS   S     H+ A+++ G+L+A+G+   GQL +    L+++  +R    PE
Sbjct: 101 ---RIIQISAGRS-----HSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE 152

Query: 426 RVDI 429
            V +
Sbjct: 153 TVQV 156


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 167/325 (51%), Gaps = 31/325 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +G  H++ + + G V+S GSN +G+LG G  +E  +   P+     +RIIQ +AG   +M
Sbjct: 54  SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSM 113

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +SD G+++A+G +S G  +  + G  L++ +P+ V SL     VQ A G   T  L+  
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGG 169

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           GRV+ +   +D R+ H   P +VE         ++P++QI+AG  + +AL    SG  ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNLFTMALTA--SG-TLF 218

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+ +  D  +PR +     +    VVV  G  H+  +  +GRV + G   
Sbjct: 219 AWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSIALTHEGRVFSCGSDS 274

Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           +G LG G     ++  + +  +       +A G   T VV+ +G +++FG   +  LGH 
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH- 332

Query: 347 AIADGQGNRHANVLTPQLVTSLKQV 371
                 GN   N +TP+++ S++ V
Sbjct: 333 ------GNTR-NQITPRMIDSVENV 350



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 27/301 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q  AG  HS+AV+  G ++++GSNS GQL   G       P+ + SL     +Q A GA 
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP--ETVQVACGAS 161

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ ++  G+V+ +G+ S G   +         SP  VE   ++ ++Q + GN FT  L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVELFVSVPIIQISAGNLFTMALT 212

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 224
             G ++ +    + +LG+ T  + + P      + NI  VV +  G  + +AL  +    
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR----EVPNINSVVVVECGDSHSIALTHEGR-- 266

Query: 225 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            V+S G    G+LG G  SR+      + E   +L      +A G  H  VV  +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPSRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           +G    G LGHGN   +  P+++ ++ +V ++  A  D +  +       Y    G S+S
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRMIDSVENVASV-FAGWDQSFCLQIRTKHAYEVLSGPSSS 380

Query: 343 L 343
           L
Sbjct: 381 L 381



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 41/339 (12%)

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIF 150
            G+ +   A+G   T+ +++ G+V++ G +  GE   G   +G+  +    +  +++   
Sbjct: 45  HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--- 101

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 209
           ++Q + G   +  +S +GR+  F+WG+++  G      D+        + ++P  VQ+A 
Sbjct: 102 IIQISAGRSHSMAVSDDGRL--FAWGSNSH-GQLAMSGDILISDTPKRVPSLPETVQVAC 158

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  + ++L     G  V+  G    G++ H        P  +E F  +++  + ++AG  
Sbjct: 159 GASHTVSLN---GGGRVFIWGQQSDGRIRHS-------PAEVELF--VSVPIIQISAGNL 206

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
               +   G +  WG    G LG+        P+ V  +N V  + V  GD  +  ++ +
Sbjct: 207 FTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSV--VVVECGDSHSIALTHE 264

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G V+S G      LG      GQ +R  N +    +T +  +   V +I+         H
Sbjct: 265 GRVFSCGSDSFGQLGC-----GQPSRSQNCMRG--ITEM--LGSHVTRIACGR-----CH 310

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           T  +  +GK++ FG    GQLG     NQ     P  +D
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQI---TPRMID 345



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 50/311 (16%)

Query: 115 QVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 166
           Q+Y FG  S G+  +         +++  P LV         + V   A G   T  L+ 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64

Query: 167 EGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +G+V++     +  LG    +      +P+  +   + ++QI+AG  + +A++       
Sbjct: 65  DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQISAGRSHSMAVS---DDGR 120

Query: 226 VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           +++ G    G+L        S T ++ P L E  Q        VA GA H   +   GRV
Sbjct: 121 LFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ--------VACGASHTVSLNGGGRV 172

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             WG    G + H        P  V+    V  I ++ G+  T  ++  G ++++G  E 
Sbjct: 173 FIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEE 225

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LG+        NR  +V+ P+ V ++  V   VV+         ++H+ ALT  G+++
Sbjct: 226 GQLGNFT------NR--DVINPREVPNINSV--VVVECG-------DSHSIALTHEGRVF 268

Query: 401 AFGAGDKGQLG 411
           + G+   GQLG
Sbjct: 269 SCGSDSFGQLG 279



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 47/272 (17%)

Query: 169 RVYTFSWGNDARLGHHTEP--NDVE----PHPLLGT---LENIPVVQIAAGYCYLLALAC 219
           ++Y F   +D +L        ND +    PH + G       + V  +A+G  + L LA 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA- 63

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQDG 278
             +   V+S G    G+LG G   +  +   I    + N ++ + ++AG  H+  V  DG
Sbjct: 64  --NDGKVWSCGSNYNGELGRGGVKEGSYT--IYPVHISNAVRIIQISAGRSHSMAVSDDG 119

Query: 279 RVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           R+  WG   +G L   G+      PK V +L +   + VA G   T  ++  G V+ +G 
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ 177

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
                + H               +P  V     V+  ++QIS  N       T ALT SG
Sbjct: 178 QSDGRIRH---------------SPAEVELF--VSVPIIQISAGN-----LFTMALTASG 215

Query: 398 KLYAFGAGDKGQLGIELVNNQTERG--NPERV 427
            L+A+G  ++GQLG     N T R   NP  V
Sbjct: 216 TLFAWGRNEEGQLG-----NFTNRDVINPREV 242



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 21/124 (16%)

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           VKA  VA+G+  T  ++ DG V+S G   +  LG   + +G     +  + P  +++   
Sbjct: 49  VKA--VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-----SYTIYPVHISNAV- 100

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE---LVNNQTER--GNPE 425
              R++QIS   S     H+ A+++ G+L+A+G+   GQL +    L+++  +R    PE
Sbjct: 101 ---RIIQISAGRS-----HSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE 152

Query: 426 RVDI 429
            V +
Sbjct: 153 TVQV 156


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 158/321 (49%), Gaps = 20/321 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 108
           AG   + AV S G V + G  S G+LG+G +     P  I     +R I  + G+ G ++
Sbjct: 168 AGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSI 227

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            I   GQ++ +G   +G+  +G   T+   SP+L+E+L +  +V A  G+  +A +   G
Sbjct: 228 AIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDADCGHRHSAAVCDAG 285

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +Y +  G+  RLG         P  +    E     Q+  G+ + + L+    G  V+S
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTD--GRTVWS 340

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    GKLGHG    +  P++I+  Q L +    +AAG   +A V ++G +  WG+G  
Sbjct: 341 FGAAENGKLGHGDTNRQFRPKIIDALQGLTITQ--IAAGTQISAAVTREGALYVWGFGP- 397

Query: 289 GCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            CLG+G ++E   +PKVV+ L+    I +A G+     +++DG V+++G  ++       
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQC---- 452

Query: 348 IADGQGNRHANVLTPQLVTSL 368
              G G+  A   +PQ+V  L
Sbjct: 453 ---GTGSGMATYTSPQMVQGL 470



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 21/279 (7%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           GHSIA+   G ++++G    G+LGHG +  +  P+ I +L    I+ A  G   +  + D
Sbjct: 224 GHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCD 283

Query: 113 AGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR- 169
           AG +Y +G+  +G    G  +Q +  V  P + E+       Q   G   T VLS +GR 
Sbjct: 284 AGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRT 337

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V++F    + +LGH        P  ++  L+ + + QIAAG   + A   +   + V+  
Sbjct: 338 VWSFGAAENGKLGHGDTNRQFRPK-IIDALQGLTITQIAAG-TQISAAVTREGALYVW-- 393

Query: 230 GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G G  LG+GS +DE    P+++    L     + +A G  H   + +DG V TWG  +
Sbjct: 394 --GFGPCLGNGS-SDETFMLPKVVR--GLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQ 448

Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFV 325
            G  G G+     + P++VQ L+      V  G   TFV
Sbjct: 449 NGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 35/353 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           V+ +GSNSS QL   T E++   PR + S+ G +++   AG   T  +   G V A GK 
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNL-SVYG-KVMSMTAGQYCTFAVLSNGTVMANGKG 188

Query: 123 SFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           S+G    G   +   +SP L+E    ++ I   + + G+  +  + + G+++T+  G+  
Sbjct: 189 SYGRLGNGA--SASSSSPILIEFPAPVRKILTSKGSDGH--SIAIGKNGQIWTWGDGDYG 244

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH        P  L+  L +  +V    G+ +  A+ C    +  Y  G G  G+LG 
Sbjct: 245 KLGHGDSTTQKSPK-LIEALASRVIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGL 300

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 298
           G       P  +   +    +   V  G  H  V+  DGR V ++G    G LGHG+   
Sbjct: 301 GDALQRSVPVQVPDIR----EASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNR 356

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           +  PK++ AL  +    +A G   +  V+ +G +Y +G G            G G+    
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCL---------GNGSSDET 407

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            + P++V  L      V+ I++  +     H  ALT+ G ++ +G    GQ G
Sbjct: 408 FMLPKVVRGLS--GRVVIDIAVGEN-----HVVALTKDGLVFTWGNNQNGQCG 453



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 27/258 (10%)

Query: 173 FSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           F WG N ++      P D   +P   ++    +   A  YC    L    S   V + G 
Sbjct: 132 FCWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVL----SNGTVMANGK 187

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G  G+LG+G+      P LIE F     + +       H+  +G++G++ TWG G YG L
Sbjct: 188 GSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKL 246

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GHG+   +  PK+++AL     +    G   +  V + G +Y +G G+   LG   + D 
Sbjct: 247 GHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG---LGDA 303

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQL 410
                     P  V  +++ ++ V   +         HT  L+  G+ +++FGA + G+L
Sbjct: 304 LQRS-----VPVQVPDIREASQVVCGFN---------HTVVLSTDGRTVWSFGAAENGKL 349

Query: 411 GIELVNNQTERGNPERVD 428
           G    N Q     P+ +D
Sbjct: 350 GHGDTNRQFR---PKIID 364



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 13/238 (5%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   R    A  G  HS AV   G +Y +G    G+LG G   +  R  P++       
Sbjct: 261 EALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ--RSVPVQVPDIREA 318

Query: 98  IQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
            Q   G   T+++S  G+ V++FG    G+  +G   T     P+++++L+ + + Q A 
Sbjct: 319 SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG--DTNRQFRPKIIDALQGLTITQIAA 376

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +A ++REG +Y   WG    LG+ +         ++  L    V+ IA G  +++A
Sbjct: 377 GTQISAAVTREGALYV--WGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVA 434

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           L     G+ V++ G    G+ G GS       P++++      +Q V   AG  H  V
Sbjct: 435 LT--KDGL-VFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVT--AGTTHTFV 487


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 40/368 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           + +AG  H+ ++ S G VY +G    GQ+G         P   R L  +  I    G   
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIH--TGVRS 95

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           TM +   G V+ +G +  G+   G    K V +P  V  L  I  +   +G + +  L+ 
Sbjct: 96  TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTP--VSGLSGIKAISGGLG-YHSMALTE 152

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G V+T+   ++  LG+ T      P  ++G  +   V  IAAG  Y LAL    +   +
Sbjct: 153 NGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD---VTAIAAGGYYSLALKSDGT---I 206

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
           ++ G    G+LG G+  D+  P      Q+  L  V+ + AG  H+  + QDG V  WG 
Sbjct: 207 WAWGANGNGELGDGTIVDKHTP-----VQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGI 261

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--L 343
             YG LG G     ++P  V+ L  +KAI  A G + +  + ++G+V+ +G        L
Sbjct: 262 NMYGTLGDGTRTNRTIPVKVRNLQHIKAI--AGGGHHSLALDQEGNVWGWGDNSRGQLGL 319

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GHN          ++  TP+ +T +    E V+ I+         H+ AL + G+++ +G
Sbjct: 320 GHN----------SSRTTPEQLTGI----EHVLDIAGG-----GFHSAALKKDGRVWGWG 360

Query: 404 AGDKGQLG 411
               GQ+G
Sbjct: 361 LNSSGQIG 368



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 157/315 (49%), Gaps = 25/315 (7%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           ++A+ S G V+++GSN +GQLG GTT ++  P P+  L GI+ I    G   +M +++ G
Sbjct: 96  TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSGIKAISGGLGY-HSMALTENG 154

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            V+ +GK+  GE   G   T    SP LV  L ++  + A  G +++  L  +G ++ + 
Sbjct: 155 TVWTWGKNDNGELGNGT--TVQQNSPVLVIGLSDVTAIAA--GGYYSLALKSDGTIWAWG 210

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
              +  LG  T  +   P  + G  +   V+ I AG  + LA+    +   V++ G  + 
Sbjct: 211 ANGNGELGDGTIVDKHTPVQVSGLSD---VIAITAGGSHSLAIKQDGT---VWAWGINMY 264

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           G LG G+RT+   P      ++ NLQ +  +A G  H+  + Q+G V  WG    G LG 
Sbjct: 265 GTLGDGTRTNRTIP-----VKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGL 319

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+    + P+ +  +  V  + +A G + +  + +DG V+ +G   S  +G     DG  
Sbjct: 320 GHNSSRTTPEQLTGIEHV--LDIAGGGFHSAALKKDGRVWGWGLNSSGQIG-----DGTR 372

Query: 354 N-RHANVLTPQLVTS 367
           N R+A  LT  ++ +
Sbjct: 373 NDRNAPALTKAVLDT 387



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 43/330 (13%)

Query: 102 AGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           AG   T  +  +G VY +G   +   G+A +  + T     P     L ++  +   + +
Sbjct: 41  AGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNT-----PVQARGLNDVMDIHTGVRS 95

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L  +G V+T+    + +LG  T  +   P P+ G L  I  +    GY    ++A
Sbjct: 96  --TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSG-LSGIKAISGGLGYH---SMA 149

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 277
              +G  V++ G    G+LG+G+   +  P L+     + L  V  +AAG +++  +  D
Sbjct: 150 LTENG-TVWTWGKNDNGELGNGTTVQQNSPVLV-----IGLSDVTAIAAGGYYSLALKSD 203

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G +  WG    G LG G    +  P  V  L+DV AI    G   +  + +DG V+++G 
Sbjct: 204 GTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDVIAI--TAGGSHSLAIKQDGTVWAWGI 261

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
               +LG        G R  N   P  V +L+ +                 H+ AL + G
Sbjct: 262 NMYGTLG-------DGTR-TNRTIPVKVRNLQHIKAIAGG---------GHHSLALDQEG 304

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            ++ +G   +GQLG+    + + R  PE++
Sbjct: 305 NVWGWGDNSRGQLGL---GHNSSRTTPEQL 331



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 20/207 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+ S G ++++G+N +G+LG GT  ++  P  +  L    +I   AG   ++ 
Sbjct: 192 AGGYYSLALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLS--DVIAITAGGSHSLA 249

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G V+A+G + +G    G +  +  T P  V +L++I  +  A G   +  L +EG 
Sbjct: 250 IKQDGTVWAWGINMYGTLGDGTRTNR--TIPVKVRNLQHIKAI--AGGGHHSLALDQEGN 305

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           V+   WG+++R    LGH++      P  L G +E+  V+ IA G  +  AL        
Sbjct: 306 VW--GWGDNSRGQLGLGHNSSR--TTPEQLTG-IEH--VLDIAGGGFHSAALKKDGR--- 355

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           V+  G    G++G G+R D   P L +
Sbjct: 356 VWGWGLNSSGQIGDGTRNDRNAPALTK 382


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2543

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 2544 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2601

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 2658

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ I+    + ++   VA G   +  + +DG V T+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 2716

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  +    VA G   T  ++ +GDVY++G      L
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 2776

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 2777 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 2813



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 2582 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2641

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ ++ L  I + + A 
Sbjct: 2642 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 2699

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 2700 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 2751

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 2752 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 2806

Query: 270  HAA 272
            H+A
Sbjct: 2807 HSA 2809



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 2502 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2561

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 2562 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2619

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 2620 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 2666

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P+++D+
Sbjct: 2667 GDYGKLGL---GNSTAKSSPQKIDV 2688



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2541

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 2542 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2599

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 2600 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 2655

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 2656 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 2715

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 2716 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 2760

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 2761 SNGDVYAWGSNSEGQLGLGHTNHVRE 2786


>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
 gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
          Length = 429

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 177/392 (45%), Gaps = 65/392 (16%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           S+A    G+V   G    GQLG G    E  RP  ++ L  +  IQ A G   T+ ++ A
Sbjct: 30  SLASDEAGIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKA 89

Query: 114 GQVY--------AFGKDS--FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           G++Y        A G+D+    EAEY          P LV+ L N+ ++Q + G+  TA 
Sbjct: 90  GEIYTWGCNDECALGRDTSDTSEAEY---------LPGLVDGLDNVKIIQVSAGDNHTAA 140

Query: 164 LSREGRVYTFS--WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           L+ +GRV+ +   W N   +G +       P  +LG   N PV++I +G  ++ AL    
Sbjct: 141 LADDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGD-PNDPVIKIGSGNNHVAALTA-- 197

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV---------------VA 265
           +G+ +++ GCG  G+LG   R  E+   R   Q     LQP V               + 
Sbjct: 198 NGL-IFTWGCGEQGQLG---RVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIF 253

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL------NDVKAIHVATG 319
            G ++   V   G V   G   YG +G+GN         + +L      ND + I +A+G
Sbjct: 254 VGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQILIASG 313

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           ++ T +++ +G VYS G G+   LG     D +   H     P  + +L   + + V   
Sbjct: 314 EHHTLILARNGRVYSIGRGDYGRLGLG--PDVKECSH-----PTEIETLANSDIKAVTCG 366

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           L       A +FA++ SG +Y++G G   QLG
Sbjct: 367 L-------AVSFAVSNSGDVYSWGMGTNLQLG 391



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 43/353 (12%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 103
           Q   G  H++A+T  G +Y++G N    LG  T+   E E+ P  +  L  ++IIQ +AG
Sbjct: 75  QVACGGVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAG 134

Query: 104 AGRTMLISDAGQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
              T  ++D G+V+ +G   D+ G     + G +    P ++    N  V++   GN   
Sbjct: 135 DNHTAALADDGRVFCWGNFWDNRGSIGLNLAGKQ--PRPIVMLGDPNDPVIKIGSGNNHV 192

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE---PNDVEP------HPLLGTL-----ENIPVVQI 207
           A L+  G ++T+  G   +LG   E     D          P +  +     ++I    I
Sbjct: 193 AALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDI 252

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN----LQPVV 263
             G   L A+    +   V++ G    G++G+G+ T   +   I+    LN     + ++
Sbjct: 253 FVGPYNLFAVN---AAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQIL 309

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQAL--NDVKAIHVATG 319
           +A+G  H  ++ ++GRV + G G YG LG G +  EC S P  ++ L  +D+KA  V  G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKEC-SHPTEIETLANSDIKA--VTCG 366

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              +F VS  GDVYS+G G +  LG +   D        +LTP LV + +  N
Sbjct: 367 LAVSFAVSNSGDVYSWGMGTNLQLGSSTDDD--------ILTPTLVKTKESYN 411



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 145/336 (43%), Gaps = 39/336 (11%)

Query: 99  QAAAGAGRTMLISD-AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           Q+     R  L SD AG V   G+   G+   G +  +  + P  V+ L  +  +Q A G
Sbjct: 21  QSKRQKARLSLASDEAGIVLVLGQGELGQLGLGEEILER-SRPTAVKKLLEVEFIQVACG 79

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHP-LLGTLENIPVVQIAAGYCYLL 215
              T  L++ G +YT+   ++  LG  T + ++ E  P L+  L+N+ ++Q++AG  +  
Sbjct: 80  GVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTA 139

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           ALA       V+  G     +   G     K PR I      N   + + +G  H A + 
Sbjct: 140 ALA---DDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGDPNDPVIKIGSGNNHVAALT 196

Query: 276 QDGRVCTWGWGRYGCLGHGNEE-CE-------------SVPKVVQ-ALNDVKAIHVATGD 320
            +G + TWG G  G LG   E  C              +V +V Q +  D++   +  G 
Sbjct: 197 ANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGP 256

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN----ERVV 376
           Y  F V+  G+V++ G      +G+  I         ++     + SL  +N    ER +
Sbjct: 257 YNLFAVNAAGEVFACGLNNYGQIGNGNIT--------SLYYLAKIDSLSALNDGNDERQI 308

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            I+         HT  L  +G++Y+ G GD G+LG+
Sbjct: 309 LIA-----SGEHHTLILARNGRVYSIGRGDYGRLGL 339



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 8/171 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI------RIIQ 99
           S    GP +  AV + G V++ G N+ GQ+G+G     +    I SL  +      R I 
Sbjct: 250 SDIFVGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQIL 309

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            A+G   T++++  G+VY+ G+  +G    G    K  + P  +E+L N  +     G  
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPD-VKECSHPTEIETLANSDIKAVTCGLA 368

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
            +  +S  G VY++  G + +LG  T+ + + P  L+ T E+      +AG
Sbjct: 369 VSFAVSNSGDVYSWGMGTNLQLGSSTDDDILTP-TLVKTKESYNFFAASAG 418



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 15/144 (10%)

Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G V   G G  G LG G E  E S P  V+ L +V+ I VA G   T  +++ G++Y++G
Sbjct: 37  GIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWG 96

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
           C +  +LG     D      A  L P LV  L  V  +++Q+S  ++     HT AL + 
Sbjct: 97  CNDECALGR----DTSDTSEAEYL-PGLVDGLDNV--KIIQVSAGDN-----HTAALADD 144

Query: 397 GKLYAFGA--GDKGQLGIELVNNQ 418
           G+++ +G    ++G +G+ L   Q
Sbjct: 145 GRVFCWGNFWDNRGSIGLNLAGKQ 168


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 166/356 (46%), Gaps = 23/356 (6%)

Query: 59  TSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           T+K V V+ +G N   QLG     +   P     L  ++    A G+  T  I++ G++Y
Sbjct: 554 TNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLY 613

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
           + G+ SFG+   G   T  VTSP+LV  L  + V + ++ +    V++       FSWG+
Sbjct: 614 SCGESSFGKLGIG-DITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGD 672

Query: 178 --DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             + +LGH    +  +PH +   +  I V  I+ G  +  A+        +Y+ G G  G
Sbjct: 673 GENGQLGHGNLMSCSKPHLIEAFVGKI-VTDISCGSAHSAAIV---ENKYLYTWGLGDFG 728

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LGHG       P+ +  F   N+  V   +       +  D +V +WG G +G LG G 
Sbjct: 729 RLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGG 788

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            E   +P  V+ L  ++   +  G   T  +++ G V+++G G+   LGH          
Sbjct: 789 SERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGT-------- 840

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +V  P+LV  L+   + V+ I++        H  A+T+ G+++++G  D GQLG
Sbjct: 841 DIHVRQPKLVEGLR--GKHVIDIAVG-----ALHCLAVTQDGEVFSWGDNDHGQLG 889



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 23/305 (7%)

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSR 166
            + +D   V+A G  + G+   G   T  VTSP+L+ES+K+I + + ++  G      LS 
Sbjct: 1489 ITTDGALVFATGYGNNGQLGLGYSET--VTSPRLLESIKHINIKKISVHSGGRHCLALSS 1546

Query: 167  EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            +G V+++  G D +LGH       +P  +      I +  I AG  +  A+        +
Sbjct: 1547 DGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKI-ITNICAGGSHSAAIGLNGE---L 1602

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            Y+ G G  G+LGHG   D+  P+ +E  Q   +  V   +G      +  D  V +WG G
Sbjct: 1603 YTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDG 1662

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             YG LG G  +   VP +++ L+    + V  G   +  +++ G +Y++G G+   LGH 
Sbjct: 1663 DYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHG 1722

Query: 347  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                       +V  P +VT+L   N+ V  IS       + H    T+ G++Y +G  D
Sbjct: 1723 T--------EEHVRRPMMVTAL--FNKIVTSISCG-----SLHCVVCTDEGEVYCWGDND 1767

Query: 407  KGQLG 411
            +GQLG
Sbjct: 1768 EGQLG 1772



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 24/345 (6%)

Query: 55   SIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLIS 111
            ++ +T+ G +V++ G  ++GQLG G +E    PR + S++ I I  I   +G    + +S
Sbjct: 1486 TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALS 1545

Query: 112  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
              G+V+++G+   G+  +G + T   + P+ +E      +     G   +A +   G +Y
Sbjct: 1546 SDGEVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELY 1603

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            T+  G   RLGH    + ++P   +  L+   V+ +A G      L C  +   V+S G 
Sbjct: 1604 TWGKGRYGRLGHGDSDDQLKPKQ-VEALQFFFVLDVACGSGDAQTL-CITNDDNVWSWGD 1661

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  GKLG G     K P +IE      +  V V  G+  +  + + G + TWG G Y  L
Sbjct: 1662 GDYGKLGRGGSDGCKVPMIIEDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRL 1719

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            GHG EE    P +V AL +     ++ G     V +++G+VY +G  +   LG   I   
Sbjct: 1720 GHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIAR 1779

Query: 352  QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
            Q        TP L T L  +N+++ +IS       +AHT A + S
Sbjct: 1780 Q--------TPTLNTFL--LNKKIDRISCG-----SAHTIAWSTS 1809



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 17/343 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAA--AGAGRT 107
           G   +  +T+KG +YS G +S G+LG G  T     PR +  L  + + + +  +G    
Sbjct: 599 GSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHV 658

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           M ++  G  +++G    G+  +G       + P L+E+     V   + G+  +A +   
Sbjct: 659 MALTSDGLAFSWGDGENGQLGHG--NLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVEN 716

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
             +YT+  G+  RLGH  E   ++P  +   L    VVQ++ G        C      V+
Sbjct: 717 KYLYTWGLGDFGRLGHGDEETILQPKFVTHFL-GYNVVQVSCG-SRDAQTVCITDDDKVW 774

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S G G  GKLG G       P  +EQ +   LQ   +  GA     + + G V TWG G 
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGKGD 832

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +  LGHG +     PK+V+ L     I +A G      V++DG+V+S+G  +   LG   
Sbjct: 833 FYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG--- 889

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
              G+ +       P L+T L     + V    ++SI W   T
Sbjct: 890 --TGETDVKK---VPNLITGLHNHRIKYVACGSSHSIAWTEIT 927



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 10/272 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H +A+TS G+ +S+G   +GQLGHG      +P  I +  G  +   + G+  +  
Sbjct: 653 SGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAA 712

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
           I +   +Y +G   FG   +G + T  +  P+ V       VVQ + G  +  T  ++ +
Sbjct: 713 IVENKYLYTWGLGDFGRLGHGDEET--ILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDD 770

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            +V+++  G+  +LG       + P   +  L  + + +I  G  + +AL    +G  V+
Sbjct: 771 DKVWSWGDGDFGKLGRGGSERCLIPVE-VEQLRGLQICKILCGAQFTVALT--KTG-TVW 826

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G G   +LGHG+    + P+L+E  +      + +A GA H   V QDG V +WG   
Sbjct: 827 TWGKGDFYRLGHGTDIHVRQPKLVEGLR--GKHVIDIAVGALHCLAVTQDGEVFSWGDND 884

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           +G LG G  + + VP ++  L++ +  +VA G
Sbjct: 885 HGQLGTGETDVKKVPNLITGLHNHRIKYVACG 916



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 119/236 (50%), Gaps = 10/236 (4%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            E  C +  +   AG  HS A+   G +Y++G    G+LGHG ++++ +P+ + +LQ   +
Sbjct: 1576 EFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFV 1635

Query: 98   IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +  A G+G  +T+ I++   V+++G   +G+   G  G+     P ++E L    +V+  
Sbjct: 1636 LDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRG--GSDGCKVPMIIEDLSGKGIVKVE 1693

Query: 156  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             G+ F+  L++ G +YT+  G+  RLGH TE +   P  ++  L N  V  I+ G   L 
Sbjct: 1694 CGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPM-MVTALFNKIVTSISCG--SLH 1750

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
             + C   G  VY  G    G+LG G+    + P L     LLN +   ++ G+ H 
Sbjct: 1751 CVVCTDEG-EVYCWGDNDEGQLGDGTIIARQTPTL--NTFLLNKKIDRISCGSAHT 1803



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 10/280 (3%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H +A++S G V+S+G    G+LGHG  +   +P+ I    G  I    AG   +  
Sbjct: 1536 SGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAA 1595

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
            I   G++Y +GK  +G   +G    +L   P+ VE+L+  FV+  A   G+  T  ++ +
Sbjct: 1596 IGLNGELYTWGKGRYGRLGHGDSDDQL--KPKQVEALQFFFVLDVACGSGDAQTLCITND 1653

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              V+++  G+  +LG         P  ++  L    +V++  G  + +AL        +Y
Sbjct: 1654 DNVWSWGDGDYGKLGRGGSDGCKVPM-IIEDLSGKGIVKVECGSQFSMALT---KYGVLY 1709

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            + G G   +LGHG+    + P ++    L N     ++ G+ H  V   +G V  WG   
Sbjct: 1710 TWGKGDYYRLGHGTEEHVRRPMMVT--ALFNKIVTSISCGSLHCVVCTDEGEVYCWGDND 1767

Query: 288  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P +   L + K   ++ G   T   S
Sbjct: 1768 EGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWS 1807



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           + + G   ++A+T  G V+++G     +LGHGT     +P+ +  L+G  +I  A GA  
Sbjct: 808 KILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALH 867

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            + ++  G+V+++G +  G+   G    K V  P L+  L N  +   A G+
Sbjct: 868 CLAVTQDGEVFSWGDNDHGQLGTGETDVKKV--PNLITGLHNHRIKYVACGS 917


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG  + Q   +   
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 1701

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 1702 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 1759

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P   +  LE   + Q+A G  + LA++    G
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-RVTALEGYQIGQVACGLNHTLAVSA--DG 1816

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 1874

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934

Query: 344  GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G           H N V  P LVT L+  N R +     +S  W A
Sbjct: 1935 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 1971



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 1740 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 1799

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 1800 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 1857

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +        L  + +  +A 
Sbjct: 1858 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDVAV 1909

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 1910 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRC 1964

Query: 270  HAA 272
            H+A
Sbjct: 1965 HSA 1967



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 1699

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P   +  L+   VVQ++ G+ +  
Sbjct: 1700 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPR-QIEALQGEEVVQMSCGFKHSA 1758

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 1759 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 1813

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 1814 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 1873

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 1874 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 1918

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 1919 STGDVYAWGSNSEGQLGLGHTNHVRE 1944



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 1660 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1719

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 1720 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 1777

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 1778 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 1824

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 1825 GDYGKLGL---GNSTAKSSPQKVDV 1846


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 172/369 (46%), Gaps = 54/369 (14%)

Query: 64  VYSFGSNSSGQLGHGTT--------EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           VY++G+ + GQLGHG+          EE  P+   +L+G  I     GA  +  I + G+
Sbjct: 71  VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +Y +G + + +   G + +++ T P+ VE+LK I +V  + G++FTA +  +G++Y++ W
Sbjct: 131 LYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGW 189

Query: 176 GNDARLGHHTEPNDV---EPHP-LLGTL--ENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           G     G     +     EP P LL TL  + +P+  +  G  + +AL        +++ 
Sbjct: 190 GGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGE---IWAW 246

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G G  G+LG+G     + P  IE F   N+  V +AAG   +  +   G + +WG     
Sbjct: 247 GNGEYGRLGNGESDTCEVPEPIEFFSKDNV--VSIAAGRDFSFALTDKGELYSWGGNSQN 304

Query: 290 CLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            LG G          ES+P +V+A N +    +A G      V+EDG +Y +G       
Sbjct: 305 QLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWG------- 357

Query: 344 GHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
                        A + + P  +T++ +   ++ Q++         +T  LT+ GK++ F
Sbjct: 358 -------------AKIWIEPHEMTAVNE--HKMTQVACGRQ-----YTVGLTDDGKVFTF 397

Query: 403 GAGDKGQLG 411
           G G    LG
Sbjct: 398 GKGSSNCLG 406



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 37/334 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS A+  +G +Y +GSN   +LG G ++E E  PR + +L+GI+I+  + G   T  
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAA 177

Query: 110 ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVL 164
           + + G++Y++G       G    G  G K   +P+L+ +L  + + +     G F T  L
Sbjct: 178 VDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVAL 237

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +++G ++ +  G   RLG+        P P+        VV IAAG  +  AL  +    
Sbjct: 238 TKDGEIWAWGNGEYGRLGNGESDTCEVPEPI-EFFSKDNVVSIAAGRDFSFALTDKGE-- 294

Query: 225 AVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            +YS G       G+GG L       E  P L+E F  L ++ +  AAG  HAA V +DG
Sbjct: 295 -LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQI--AAGYDHAAAVTEDG 351

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           R+  WG            +    P  + A+N+ K   VA G   T  +++DG V++FG G
Sbjct: 352 RLYMWG-----------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKG 400

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            S  LGH       G+R  N L P  + +L  VN
Sbjct: 401 SSNCLGH-------GDRK-NQLQPVKIQALAGVN 426



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 19/207 (9%)

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGS--------RTDEKHPRLIEQFQLLNLQPVVVA 265
           +L  A   +  +VY+ G G  G+LGHGS          +E  P+L E  +   +  V   
Sbjct: 59  VLRTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEF- 117

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 324
            GA H+A + ++G++  WG   Y  LG G + E E++P+ V+AL  +K + V+ GDY T 
Sbjct: 118 -GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTA 176

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            V EDG +YS+G G S                 +  TP+L+T+L  V++ V   ++    
Sbjct: 177 AVDEDGKMYSWGWGGST---MKGAGGLGHAGGKDEPTPRLLTTL--VDQGVPIATVECGE 231

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLG 411
           +   HT ALT+ G+++A+G G+ G+LG
Sbjct: 232 F---HTVALTKDGEIWAWGNGEYGRLG 255



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 27/312 (8%)

Query: 106 RTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           RT   +    VY +G  + G+       + G++      +P+L E+L+   +     G  
Sbjct: 61  RTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGAS 120

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 218
            +A +  EG++Y +     ++LG   E +++E  P  +  L+ I +V ++ G  Y  A  
Sbjct: 121 HSAAIDEEGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGIKIVDVSCG-DYFTAAV 178

Query: 219 CQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            +   M  YS G G       G LGH    DE  PRL+       +    V  G +H   
Sbjct: 179 DEDGKM--YSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           + +DG +  WG G YG LG+G  +   VP+ ++  +    + +A G   +F +++ G++Y
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELY 296

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           S+G      LG   I  G      N+ + P LV +   +   V QI+         H  A
Sbjct: 297 SWGGNSQNQLG---IGGGLAMDVYNIESIPVLVEAFNGL--LVKQIAAGYD-----HAAA 346

Query: 393 LTESGKLYAFGA 404
           +TE G+LY +GA
Sbjct: 347 VTEDGRLYMWGA 358



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 25/230 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++A+T  G ++++G+   G+LG+G ++    P PI       ++  AAG   +  +
Sbjct: 230 GEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFAL 289

Query: 111 SDAGQVYAFGKDSFGEAEYGVQG------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           +D G++Y++G +S  + + G+ G        + + P LVE+   + V Q A G    A +
Sbjct: 290 TDKGELYSWGGNS--QNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAV 347

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +GR+Y   WG  A++        +EPH +    E+  + Q+A G  Y + L       
Sbjct: 348 TEDGRLYM--WG--AKIW-------IEPHEMTAVNEH-KMTQVACGRQYTVGLTDDGK-- 393

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            V++ G G    LGHG R ++  P  I+    +N+    V+ G +H   +
Sbjct: 394 -VFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITS--VSCGDYHMGAI 440



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 21/183 (11%)

Query: 43  RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGI 95
           ++N  +IA G   S A+T KG +YS+G NS  QLG G          E  P  + +  G+
Sbjct: 273 KDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGL 332

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            + Q AAG      +++ G++Y +             G K+   P  + ++    + Q A
Sbjct: 333 LVKQIAAGYDHAAAVTEDGRLYMW-------------GAKIWIEPHEMTAVNEHKMTQVA 379

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G  +T  L+ +G+V+TF  G+   LGH    N ++P  +   L  + +  ++ G  ++ 
Sbjct: 380 CGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQ-ALAGVNITSVSCGDYHMG 438

Query: 216 ALA 218
           A+A
Sbjct: 439 AIA 441


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 166/369 (44%), Gaps = 44/369 (11%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT  +   P+ + S   + +   + G    ML++  G+ +++G+++ G   +G +    V
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETD--V 348

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPH 193
           + P+L+++ K + V   A G + +  ++  G +YT  WG+ A+    LGH +E +   P 
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYT--WGDGAKSSGLLGHRSEASHWIPK 406

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            + G +E + V  ++ G  +   +    S   +++ G G  G LGHG R+    PR +E 
Sbjct: 407 KVCGLMEGLRVSHVSCGPWHTALIT---SAGRLFTFGDGTFGALGHGDRSGCITPREVET 463

Query: 254 FQLLNLQPVVVAAGAWHAAVV-----GQDGR--------VCTWGWGRYGCLGHGNEECES 300
           F    L+ + VA G WH A V     G D R        + TWG G  G LGHG+ +   
Sbjct: 464 FN--GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL 521

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            P+ + AL D     VA     T  ++  G VY+ G      LG            AN +
Sbjct: 522 APQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL---------ANGM 572

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P  V     V+  V +IS  +      H   LT   ++Y +G G+ GQLG     N+  
Sbjct: 573 SPICVEDY-LVDSTVEEISCGSH-----HVAVLTSRTEVYTWGKGENGQLGHGDCENKC- 625

Query: 421 RGNPERVDI 429
              P  VDI
Sbjct: 626 --TPTLVDI 632



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 36/362 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT +G  +S+G  + G+LGHG   +   P+ I++ +G+ +   A G   +  +
Sbjct: 316 GNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAV 375

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESL-KNIFVVQAAIGNFFTAVLSR 166
           + +G +Y +G    G    G+ G +   S   P+ V  L + + V   + G + TA+++ 
Sbjct: 376 TSSGDLYTWGD---GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITS 432

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 224
            GR++TF  G    LGH      + P   + T   +  +++A G  +  A+    SG+  
Sbjct: 433 AGRLFTFGDGTFGALGHGDRSGCITPRE-VETFNGLKTLKVACGVWHTAAVVELMSGLDS 491

Query: 225 --------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVV 274
                    +++ G G  GKLGHG    +  PRL  Q    L++     VA        +
Sbjct: 492 RPSDAPSGTLFTWGDGDKGKLGHG----DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              GRV T G   YG LG       S   V   L D     ++ G +   V++   +VY+
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFA 392
           +G GE+  LGH            N  TP LV  L  KQV   V   + + +I    H +A
Sbjct: 608 WGKGENGQLGHGDC--------ENKCTPTLVDILRDKQVKRIVCGSNFSAAIC--VHNWA 657

Query: 393 LT 394
           L+
Sbjct: 658 LS 659



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  +TS G +++FG  + G LGHG       PR + +  G++ ++ A G  
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVW 477

Query: 106 RTMLI-----------SDA--GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
            T  +           SDA  G ++ +G    G+  +G    +L  +PQ + +L +    
Sbjct: 478 HTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL--APQCITALVDKSFS 535

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           + A     T  L+  GRVYT       +LG     N + P  +   L +  V +I+ G  
Sbjct: 536 EVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLA-NGMSPICVEDYLVDSTVEEISCGSH 594

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAG 267
           ++  L    S   VY+ G G  G+LGHG   ++  P L++  +   ++ +V      AA 
Sbjct: 595 HVAVLT---SRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651

Query: 268 AWHAAVVGQDGRVCTWGWGRYGC 290
             H   +  D  +C      +GC
Sbjct: 652 CVHNWALSADNSIC------FGC 668


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 14/305 (4%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q+I+ G  H+  V   G +Y  G+NS GQLG      +++P  + +L+ + I   A G  
Sbjct: 40  QSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDD 97

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ +SD GQV  +G++  G+        +    P++++ L +   V+   G+  +  L+
Sbjct: 98  HTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPS 222
           R+GR+  FSWG++   +LG  T   +    P  L +L  +P+V++A G  +  AL    S
Sbjct: 158 RDGRL--FSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 215

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              V+  G    G+LG G++ ++ +P L+   +   ++   +A G  H A++  DG V  
Sbjct: 216 ---VFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKH--IACGQDHTAMLTADGGVFL 270

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESA 341
           +G G  G LGHG+   E  P+ V  L       V  G + T V+    G +Y+FG G   
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHG 330

Query: 342 SLGHN 346
            LG +
Sbjct: 331 QLGQD 335



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 165/371 (44%), Gaps = 34/371 (9%)

Query: 64  VYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            + +GS+  GQLG G T     +   + + +L G R+   + G   T ++ D G +Y  G
Sbjct: 3   TFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCG 62

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            +S G+        K    P  V +L+ + +   A G+  T  +S  G+V    WG + R
Sbjct: 63  ANSKGQLGQDRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQV--LGWGRNDR 116

Query: 181 LGHHTEPNDVEPHP---LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
                   D+E  P   +L  L +   V++  G  + +AL        ++S G    G+L
Sbjct: 117 GQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQL 173

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G G+       R  E   L  +  V VA G +H+  +   G V  WG    G LG GN+E
Sbjct: 174 GIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE 233

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
            ++ P +++ +      H+A G   T +++ DG V+ FG G    LGH +        + 
Sbjct: 234 NKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS--------NY 285

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVN 416
           N + P+ V  L  +   + Q++         HT  L  S G+LYAFG G  GQLG +   
Sbjct: 286 NEVNPRKVIDL--MGSDITQVTCGKH-----HTLVLEGSKGRLYAFGQGIHGQLGQDEAR 338

Query: 417 NQTERGNPERV 427
           + +   NP+RV
Sbjct: 339 SCS---NPQRV 346



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 179/414 (43%), Gaps = 72/414 (17%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGA 104
           +   G  HS+A+T  G ++S+G N+ GQLG GT    +  RP  + SL+G+ +++ A G 
Sbjct: 145 KVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGG 204

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  ++ +G V+ +GK+  G+   G +  K    P L+ ++++  V   A G   TA+L
Sbjct: 205 FHSFALTISGSVFGWGKNDVGQLGLGNKENK--AYPTLLRNMRSQMVKHIACGQDHTAML 262

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G V+ F  G++ +LGH +  N+V P  ++  L    + Q+  G  + L L  + S  
Sbjct: 263 TADGGVFLFGQGSEGQLGHGSNYNEVNPRKVI-DLMGSDITQVTCGKHHTLVL--EGSKG 319

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAV---VGQDGR 279
            +Y+ G G+ G+LG        +P+ +               G W  H++        GR
Sbjct: 320 RLYAFGQGIHGQLGQDEARSCSNPQRV--------------PGPWVPHSSTEKNSSSKGR 365

Query: 280 V--CTWGWGRYGCLGHGNEECESVP-----------------------------KVVQAL 308
           V  C +  G + C        + +                                   L
Sbjct: 366 VVRCIYAGGHH-CFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXL 424

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
             V   HVA GD  T  VS+   V  +G  +    G   +A G      N   P+++  L
Sbjct: 425 ETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCG---LATGDIE---NKPRPRILRHL 478

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-ELVNNQTER 421
              + + V++        + H+ ALT  G+L+++G    GQLGI  LV N T+R
Sbjct: 479 --ASYQFVKVCCG-----SLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDR 525



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
           G  H++AV+ +G V  +G N  GQ G  T + E +PRP  ++ L   + ++   G+  +M
Sbjct: 95  GDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSM 154

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G+++++G +++G+   G   T     P  + SL+ + +V+ A G F +  L+  G
Sbjct: 155 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 214

Query: 169 RVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            V  F WG ND  +LG   + N   P  LL  + +  V  IA G  +   L    +   V
Sbjct: 215 SV--FGWGKNDVGQLGLGNKENKAYP-TLLRNMRSQMVKHIACGQDHTAMLT---ADGGV 268

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGW 285
           +  G G  G+LGHGS  +E +PR +    L+      V  G  H  V+ G  GR+  +G 
Sbjct: 269 FLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ 326

Query: 286 GRYGCLGHGNEECESVPKVV 305
           G +G LG       S P+ V
Sbjct: 327 GIHGQLGQDEARSCSNPQRV 346



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
           G  H++AV+ +  V  +G N  GQ G  T + E +PRP  +R L   + ++   G+  +M
Sbjct: 435 GDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSM 494

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G+++++G +++G+   G   T     P  + SL+ + +V+ A G F +  L+  G
Sbjct: 495 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 554

Query: 169 RVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            V  F WG ND  +LG   + N   P  LL  + +  V  IA G  +   L    +   V
Sbjct: 555 SV--FGWGKNDVGQLGLGNKENKSYP-TLLRNMRSQMVKHIACGQDHTAMLT---ADGGV 608

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGW 285
           +  G G  G+LGHGS  +E +PR +    L+      V  G  H  V+ G  GR+  +G 
Sbjct: 609 FLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ 666

Query: 286 GRYGCLGHGNEECESVPKVV 305
           G +G LG       S P+ V
Sbjct: 667 GIHGQLGQDEARSCSNPQRV 686



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           L+ + I   A G   T+ +SD  QV  +G++  G+        +    P+++  L +   
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIA 208
           V+   G+  +  L+R+GR+  FSWG++   +LG  T   +    P  L +L  +P+V++A
Sbjct: 484 VKVCCGSLHSMALTRDGRL--FSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVA 541

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G  +  AL    S   V+  G    G+LG G++ ++ +P L+   +   ++   +A G 
Sbjct: 542 CGGFHSFALTISGS---VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKH--IACGQ 596

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS- 327
            H A++  DG V  +G G  G LGHG+   E  P+ V  L       V  G + T V+  
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEG 656

Query: 328 EDGDVYSFGCGESASLGHN 346
             G +Y+FG G    LG +
Sbjct: 657 SKGRLYAFGQGIHGQLGQD 675



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 163/408 (39%), Gaps = 49/408 (12%)

Query: 46  SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPI------------RSL 92
           +Q   G  H++ +  SKG +Y+FG    GQLG         P+ +             S 
Sbjct: 302 TQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSS 361

Query: 93  QGIRIIQAAAGAGRTML-----ISDAGQVYAFGKDS----FGEAEYGVQGTKLVTSPQLV 143
              R+++     G          +D  Q+    +D     F +                 
Sbjct: 362 SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXX 421

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLE 200
             L+ + +   A G+  T  +S   RV    WG + R        D+E  P   +L  L 
Sbjct: 422 XXLETVVIKHVACGDDHTLAVS--DRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLA 479

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           +   V++  G  + +AL        ++S G    G+LG G+       R  E   L  + 
Sbjct: 480 SYQFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVP 536

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
            V VA G +H+  +   G V  WG    G LG GN+E +S P +++ +      H+A G 
Sbjct: 537 LVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQ 596

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T +++ DG V+ FG G    LGH +        + N + P+ V  L  +   + Q++ 
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGS--------NYNEVNPRKVIDL--MGSDITQVTC 646

Query: 381 TNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                   HT  L  S G+LYAFG G  GQLG +   + +   NP+RV
Sbjct: 647 GKH-----HTLVLEGSKGRLYAFGQGIHGQLGQDEARSCS---NPQRV 686


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 23/288 (7%)

Query: 54  HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
           H  AVT  G +Y++G  ++S G LGHG     W P+ +   L+ +R+   A G   T ++
Sbjct: 372 HGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVV 431

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
           + AGQ++ FG  +FG    G    +   SP+ VESLK +  V+AA G + TA +      
Sbjct: 432 TTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 489

Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
                    G+++T+  G+  RLGH  +   + P   +  L +    ++A G+   +AL 
Sbjct: 490 SSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAALVDHNFRKVACGHSLTVALT 548

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            +     V+++G  + G+LG   + D K P ++E  +L++     +A GA H A V    
Sbjct: 549 TKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVTLKS 603

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            V TWG G  G LGHG++E  + P +V+AL + +   +A G   T  V
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAV 651



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 47/361 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+V+ +G++S G   +GV     V+ PQLVE+
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 357

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L +      A G +    ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 358 LASSTTEVVACGEYHGCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415

Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           + V  IA G  +  ++  A Q     +++ G G  G LGH  R     PR +E   L  L
Sbjct: 416 VRVASIACGPWHTAVVTTAGQ-----LFTFGDGTFGVLGHNDRQSAYSPREVES--LKGL 468

Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           + V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V A
Sbjct: 469 RTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAA 528

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
           L D     VA G   T  ++  G+V++ G      LG +  ADG+         P +V  
Sbjct: 529 LVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLG-DPQADGK--------LPGMVEG 579

Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                 R+V   + +      H   +T   ++Y +G G  G+LG     +Q +R  P  V
Sbjct: 580 ------RLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGH---GDQEDRNTPTLV 630

Query: 428 D 428
           +
Sbjct: 631 E 631



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VT+ G +++FG  + G LGH   +  + PR + SL+G+R ++AA G   T  +
Sbjct: 424 GPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G    G   +G +  +LV  P  V +L +    + A G+
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGH 541

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+ +G V+T       +LG   + +   P  + G L +  V  IA G  +   +A
Sbjct: 542 SLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMVEGRLVDAYVEDIACGAHH---VA 597

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
           C      VY+ G G  G+LGHG + D   P L+E  +   ++ +       AA   H  +
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWL 657

Query: 274 VGQDGRVCT 282
            G D   C+
Sbjct: 658 SGADQNACS 666



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  Y+         +   SV  G GG +      D   P+ +E   +L++Q   VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAM----NLDAPLPKALESAIVLDVQ--YVACG 317

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             HAA+V + G V TWG    G LGHG +   S P++V+AL       VA G+Y    V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
             GD+Y++G G      H+    G GN  ++ +  ++   L++V  RV  I+      W 
Sbjct: 378 LSGDLYTWGDGT-----HSLGLLGHGNDISHWIPKRVNGPLEEV--RVASIACGP---W- 426

Query: 388 AHTFALTESGKLYAFGAGDKGQLG 411
            HT  +T +G+L+ FG G  G LG
Sbjct: 427 -HTAVVTTAGQLFTFGDGTFGVLG 449


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 42/379 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAGR 106
           +AG  H+ ++ S G VYS+G    GQLG GT    W  R  P+ +     +I   +G   
Sbjct: 39  VAGYYHTASLVSSGEVYSWGYGDRGQLGDGT----WNTRTTPVMAKNLNHVIDIHSGVRS 94

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +   G V+ +G +  G+   G+     V +P  V  L  I  +   +  +    LS 
Sbjct: 95  SMALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVPGLSGIKAISGGLA-YHGMALSE 151

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G V+T+   ++  LG+ T      P  + G  +   V  IAAG  Y LAL    +   V
Sbjct: 152 NGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGT---V 205

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
           ++ G    G+LG G+ TD   P      Q+  L  V+ +AAG  H+  + QDG V  WG 
Sbjct: 206 WAWGVNGSGELGDGTTTDRHVP-----VQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGN 260

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             YG LG G     + P  V+ L  + A  VA G Y +  V   G+V+S+G      LG 
Sbjct: 261 NTYGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHSLAVDRAGNVWSWGDNSQQQLGL 318

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
           N+        +A+ L P  V  ++ V E    IS         H+ A+ + G ++ +G  
Sbjct: 319 NS--------NASSLIPVPVPGIEHVRE----ISAG-----GFHSVAMKKDGTVWGWGYN 361

Query: 406 DKGQLGIELVNNQTERGNP 424
             GQ+G    NN   RG P
Sbjct: 362 SGGQIGDGTYNNT--RGIP 378



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           + AG +H A +   G V +WG+G  G LG G     + P + + LN V  IH  +G  ++
Sbjct: 38  IVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             + +DG V+++G  E+  LG   I         NV  P  V  L  +       +++  
Sbjct: 96  MALRQDGTVWTWGANENGQLGIGTI--------TNVNAPAQVPGLSGIK------AISGG 141

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + +  H  AL+E+G ++ +G  D G+LG
Sbjct: 142 LAY--HGMALSENGTVWTWGKNDNGELG 167


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 162/365 (44%), Gaps = 54/365 (14%)

Query: 63   VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
             ++ +G N  GQLG         P P  +L  +R IQ A G      ++  G++YA G  
Sbjct: 3945 TIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 123  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
            +      G+ GT  V++P LVESL+++ + + A+  G      LS +G V+++  G D +
Sbjct: 4005 A--GGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4062

Query: 181  LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
            LGH    +   P  L+  L  I VV IA G  +    AC  S   V + G G  G+LGHG
Sbjct: 4063 LGHGNRDSYDRPK-LIEALSGIGVVDIACGSAH---SACITSQGHVLTWGKGRYGRLGHG 4118

Query: 241  SRTDEKHPR--------------------LIEQFQLLNLQP-----------VVVAAGAW 269
               D+  P+                    L E+  +    P           + V  G+ 
Sbjct: 4119 DSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQ 4178

Query: 270  HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
             +  + + G V TWG G Y  LGHGN +    PK V AL   K I +ATG       S+ 
Sbjct: 4179 FSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4238

Query: 330  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            G+V+++G  +   LG   +   Q         P+LV SL+   + +V++     I  +AH
Sbjct: 4239 GEVFTWGDNDEGQLGDGTVTAIQ--------RPRLVQSLQ--GKHIVKV-----ICGSAH 4283

Query: 390  TFALT 394
            T AL+
Sbjct: 4284 TLALS 4288



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 181/394 (45%), Gaps = 37/394 (9%)

Query: 31   LRFLLAGEACCRRENSQAIAGPGHSIA-----------VTSKGVVYSFGSNSSGQLGHGT 79
            L  +L   +    EN  A A P +S +           ++SK +V+  G N   QLG   
Sbjct: 2868 LEMMLQNASFLATENDSA-AEPSYSTSSNYADEQSSNEISSKVLVW--GLNDKEQLGGLK 2924

Query: 80   TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
              +   P     L  ++ I  + G+    ++S  G++YA G+ + G    G+     V +
Sbjct: 2925 GSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGR--LGLGHNNNVPT 2982

Query: 140  PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
            P+ V  L    V + A+  G      L+ +G+V+++  G D +LGH       +P  LL 
Sbjct: 2983 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPK-LLE 3041

Query: 198  TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            +L    +  IA G  +  A+    S   +Y+ G G  G+LGHG    +  P+L+   Q  
Sbjct: 3042 SLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGH 3098

Query: 258  NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
             +  V   +       + ++G V +WG G +G LG G  E  SVP  V+ LN V  + + 
Sbjct: 3099 RVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIE 3158

Query: 318  TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
             G   +  +++ G+V+++G G+   LGH        ++H    TP  +  L+   ++V+ 
Sbjct: 3159 CGAQFSLALTKIGEVWTWGKGDYYRLGHGT------DQHVRKPTP--IQGLR--GKKVIH 3208

Query: 378  ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +++        H  A+T+SG+++A+G  D GQ G
Sbjct: 3209 VAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG 3237



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 12/273 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  H++A+T  G V+S+G    G+LGHG      +P+ + SL+  RI   A G+  +  
Sbjct: 3001 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAA 3060

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
            I+ +G++Y +G   +G   +G   T+L   P+LV +L+   VVQ A G  +  T  L+ E
Sbjct: 3061 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALQGHRVVQVACGSRDAQTLCLTEE 3118

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G V+++  G+  +LG         PH  +  L  + VVQI  G  + LAL        V+
Sbjct: 3119 GLVFSWGDGDFGKLGRGGSEGCSVPHQ-VERLNGVGVVQIECGAQFSLALT---KIGEVW 3174

Query: 228  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
            + G G   +LGHG+   ++H R     Q L  + V+ VA GA H   V   G+V  WG  
Sbjct: 3175 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDN 3231

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
             +G  G GN      P +V  L+ V    VA G
Sbjct: 3232 DHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 166/348 (47%), Gaps = 39/348 (11%)

Query: 66  SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           S  SN+S QL  G+    +    I     +++ Q A       +++ +GQ+Y+    S  
Sbjct: 506 SEASNASAQLLAGSVPR-YSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI-HSSCA 563

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLG 182
           E            +P+LVE L+ + V+Q A    G    A LS  G VY++  G   RLG
Sbjct: 564 E----------TVAPKLVEGLEGVSVIQIAAHCEGRHAMA-LSSAGEVYSWGAGEGGRLG 612

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
           H    +   P  +   LE   V  I AG  Y  A++   S   +++ G G  G+LGHG+ 
Sbjct: 613 HGDTASKEVPTKI--ALEK-QVTAIYAGASYSAAVS---SVGELFTWGRGTYGRLGHGNS 666

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            D+  P  ++  +   +  V + +G  H+  V   G +  WG G +G LG+G+     +P
Sbjct: 667 DDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLP 726

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
             ++ ++ V  I+  +G   +  +S DG +YS+G G    LGH        + H+NV  P
Sbjct: 727 VQIEGVSSVARIY--SGSQFSVALSYDGTLYSWGKGHGGRLGHG------NSEHSNV--P 776

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           +LV +L+   +++V +++ +     AH  ALT SG+LY +G  D  Q+
Sbjct: 777 KLVHALE--GKKIVDVAVGS-----AHCLALTSSGELYGWGRNDYQQI 817



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 21/281 (7%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GR-TMLISDAGQ 115
           VT+ G +YS          H +  E   P+ +  L+G+ +IQ AA   GR  M +S AG+
Sbjct: 549 VTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGE 599

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VY++G    G   +G   +K V +   +E  K +  + A  G  ++A +S  G ++T+  
Sbjct: 600 VYSWGAGEGGRLGHGDTASKEVPTKIALE--KQVTAIYA--GASYSAAVSSVGELFTWGR 655

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
           G   RLGH    +   P  +   L+   VV +A G     ++A    G+ +++ G G  G
Sbjct: 656 GTYGRLGHGNSDDKFVPTQV-QALKAYKVVDVALGSGDAHSMAVTDGGL-LFAWGDGDFG 713

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           KLG+GS      P  IE    +      + +G+  +  +  DG + +WG G  G LGHGN
Sbjct: 714 KLGNGSCNGSPLPVQIEGVSSV----ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN 769

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            E  +VPK+V AL   K + VA G      ++  G++Y +G
Sbjct: 770 SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 36/300 (12%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           ++Y F  ++   +   + G+    S   +E   ++ V Q A       +++  G++Y+  
Sbjct: 500 EMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI- 558

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
                   H +    V P  L+  LE + V+QIAA      A+A   +G  VYS G G G
Sbjct: 559 --------HSSCAETVAPK-LVEGLEGVSVIQIAAHCEGRHAMALSSAG-EVYSWGAGEG 608

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LGHG    ++ P  I     L  Q   + AGA ++A V   G + TWG G YG LGHG
Sbjct: 609 GRLGHGDTASKEVPTKIA----LEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHG 664

Query: 295 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           N + + VP  VQAL   K + VA  +GD  +  V++ G ++++G G+   LG+       
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGN------- 717

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 411
           G+ + + L  Q           +  +S    IY  +  + AL+  G LY++G G  G+LG
Sbjct: 718 GSCNGSPLPVQ-----------IEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLG 766



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 18/237 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A++S G VYS+G+   G+LGHG T  +  P  I   + +  I   AGA  +  +S  
Sbjct: 590 HAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIY--AGASYSAAVSSV 647

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
           G+++ +G+ ++G   +G    K V  P  V++LK   VV  A+  G+  +  ++  G ++
Sbjct: 648 GELFTWGRGTYGRLGHGNSDDKFV--PTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLF 705

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +  G+  +LG+          PL   +E +  V +I +G  + +AL+   +   +YS G
Sbjct: 706 AWGDGDFGKLGN----GSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYDGT---LYSWG 758

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G GG+LGHG+      P+L+   +    + V VA G+ H   +   G +  +GWGR
Sbjct: 759 KGHGGRLGHGNSEHSNVPKLVHALE--GKKIVDVAVGSAHCLALTSSGEL--YGWGR 811



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 9/171 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RT 107
           AG  +S AV+S G ++++G  + G+LGHG +++++ P  +++L+  +++  A G+G   +
Sbjct: 636 AGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHS 695

Query: 108 MLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           M ++D G ++A+G   FG+   G   G+ L    + V S+  I+      G+ F+  LS 
Sbjct: 696 MAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYS-----GSQFSVALSY 750

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +G +Y++  G+  RLGH    +   P  L+  LE   +V +A G  + LAL
Sbjct: 751 DGTLYSWGKGHGGRLGHGNSEHSNVPK-LVHALEGKKIVDVAVGSAHCLAL 800



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 32/263 (12%)

Query: 173  FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            F WG++ R  LG         P P    L  +  +QIA G   L A+   P G  +Y+ G
Sbjct: 3947 FGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 4002

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
             G GG+LG G       P L+E  Q + ++ V V +G  H   +  DG V +WG G  G 
Sbjct: 4003 YGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4062

Query: 291  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            LGHGN +    PK+++AL+ +  + +A G   +  ++  G V ++G G    LGH    D
Sbjct: 4063 LGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4122

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH--------------------- 389
                +   + T    T +  V    +  SL   +   A                      
Sbjct: 4123 QLQPKRCVLRT----TIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQ 4178

Query: 390  -TFALTESGKLYAFGAGDKGQLG 411
             + ALT SG +Y +G GD  +LG
Sbjct: 4179 FSVALTRSGSVYTWGKGDYHRLG 4201



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 42/287 (14%)

Query: 157 GNFFTAVLSREG---RVYTFSWGN--DARLGHHTEPNDVEPHPLLG--------TLENIP 203
           GN+   V ++     +++T  W +      G  +E ++     L G        T+E  P
Sbjct: 473 GNYSAKVNAKANSAQKIFTLGWSSCSPEMYGFTSEASNASAQLLAGSVPRYSTATIELPP 532

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
            +Q+    C   ++    +   +YS+         H S  +   P+L+E  + +++  + 
Sbjct: 533 SLQVRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIA 583

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
                 HA  +   G V +WG G  G LGHG+   + VP  +     V AI+   G   +
Sbjct: 584 AHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA--GASYS 641

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             VS  G+++++G G    LGH    D           P  V +LK    +VV ++L + 
Sbjct: 642 AAVSSVGELFTWGRGTYGRLGHGNSDDK--------FVPTQVQALKAY--KVVDVALGSG 691

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
              +AH+ A+T+ G L+A+G GD G+LG     N +  G+P  V I+
Sbjct: 692 ---DAHSMAVTDGGLLFAWGDGDFGKLG-----NGSCNGSPLPVQIE 730



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            Q   G   S+A+T  G V+++G     +LGHGT +   +P PI+ L+G ++I  A GA  
Sbjct: 3156 QIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3215

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + ++D+GQV+A+G +  G+   G   T +   P LV  L  +FV + A G+
Sbjct: 3216 CLAVTDSGQVFAWGDNDHGQQ--GSGNTVVNKKPNLVLGLDGVFVNRVACGS 3265



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 47/75 (62%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   S+A++  G +YS+G    G+LGHG +E    P+ + +L+G +I+  A G+   + 
Sbjct: 740 SGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLA 799

Query: 110 ISDAGQVYAFGKDSF 124
           ++ +G++Y +G++ +
Sbjct: 800 LTSSGELYGWGRNDY 814



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 13/105 (12%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H +AVT  G V+++G N  GQ G G T    +P  +  L G+ + + A G+  ++  
Sbjct: 3212 GALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAW 3271

Query: 111  S--------DAGQ--VYAFGKDSFGEAE---YGVQGTKLVTSPQL 142
            S        D  +   +A  KD  G      Y +      + PQL
Sbjct: 3272 SLPQNPSEKDKKEPVPFAVSKDPLGSHSLGIYALDSEPTTSQPQL 3316


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 170/379 (44%), Gaps = 38/379 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++GSN  GQLG G ++    P  +  L G+  +  AAG   ++ 
Sbjct: 156 AGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGV--VALAAGFDFSLA 213

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G+   G    +L  +P  V  L+ +  V A +  +    L  +G 
Sbjct: 214 VRSDGTVWAWGANGSGQLGDGTYIQRL--APTQVSQLQGVSAVTAGL--YHALALRSDGT 269

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +  ++G  T  +   P  +        V    AG   LL          V++ 
Sbjct: 270 VWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLL------DDGGVFAW 323

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+  D   P  +     +      +AAG  HA V+  DG + TWG G  G
Sbjct: 324 GLNSQGQLGIGTTADSPLPVRVRGLGAVT----SLAAGTQHAVVLRADGTLWTWGHGATG 379

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LGHG+ E    P+VV  L++V +  VA+G + +     DG V+++G   +  LG     
Sbjct: 380 QLGHGSSERMLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTT 437

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           +    RH  V  P L          VV +S +       H+FAL   G ++ +G   +GQ
Sbjct: 438 E----RHLPVRVPGL--------SGVVSVSASGH-----HSFALRSDGTVWGWGRNAQGQ 480

Query: 410 LGIELVNNQTERGNPERVD 428
           +G        +R +P RV+
Sbjct: 481 MGD---GTTKDRASPARVE 496



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 170/368 (46%), Gaps = 39/368 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   AG  H++A+ S G V+++GSNSSGQ+G GT  +  RP P++     R    AA   
Sbjct: 252 SAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD--RPSPVQVTSIARAKAVAAQDA 309

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++++ D G V+A+G +S G+   G        SP  V       V   A G     VL 
Sbjct: 310 GSLVLLDDGGVFAWGLNSQGQLGIGTT----ADSPLPVRVRGLGAVTSLAAGTQHAVVLR 365

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G ++T+  G   +LGH +    + P  ++  L N  V  +A+G  + +A     S   
Sbjct: 366 ADGTLWTWGHGATGQLGHGSSERMLSPE-VVTRLSN--VASVASGSFHSVAALSDGS--- 419

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G    G+LG G+ T+   P  +     +    V V+A   H+  +  DG V  WGW
Sbjct: 420 VWTWGRNTNGQLGDGTTTERHLPVRVPGLSGV----VSVSASGHHSFALRSDGTV--WGW 473

Query: 286 GR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           GR   G +G G  +  + P  V+ L+ VKA+  A+G      +  DG V+++G   +  L
Sbjct: 474 GRNAQGQMGDGTTKDRASPARVEGLSSVKAL--ASGGSHMVALRTDGTVWTWGYNGAGQL 531

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G     D    R A    P  VT L  V       S+    Y    + AL   G ++A+G
Sbjct: 532 GDGTTTD----RRA----PVQVTGLSGVT------SVAAGAY---FSLALRTDGTVWAWG 574

Query: 404 AGDKGQLG 411
            G +GQLG
Sbjct: 575 DGFEGQLG 582



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 178/423 (42%), Gaps = 90/423 (21%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  +S+AV   G V+S+G+N SGQLG GT      P+P++ L  ++ +   AGA   + +
Sbjct: 957  GQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLADVKAV--TAGAHHVVAV 1014

Query: 111  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
               G V+ +G ++FG+   G    +    P  VE L N   V+ + G   +  L  + R 
Sbjct: 1015 RHDGTVWGWGANAFGQVGDGTHFWRF--RPVRVEGLLN--AVETSAGEQHSLALLGDERA 1070

Query: 171  YTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL------ 217
               SWG+       DA  G   EP  V+   L  +   +P V ++A + +  AL      
Sbjct: 1071 --LSWGSHEYGQLGDAESGPSLEPVGVK---LPSSKVLVPAVSVSAWHQHAAALLADGTV 1125

Query: 218  --------------------------------ACQP---------SGMAVYSVGCGLGGK 236
                                            A  P         S   V++ G    G+
Sbjct: 1126 QTWGGNADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQ 1185

Query: 237  LGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
            LG GS T    P      Q++ L+ V  +AAG++H+  V +DG V  WG+  +G LG G 
Sbjct: 1186 LGDGSNTRRTLP-----VQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGT 1240

Query: 296  EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
             +  +VP  +  L+   A+ VA G+Y + ++  DG +++ G      LG           
Sbjct: 1241 MDARAVPTRMLGLD--GAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTF------- 1291

Query: 356  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
              N L+P  V  L QV  R V+           H+ AL E G ++ +G   +GQLG   V
Sbjct: 1292 -TNRLSPFQVVELDQV--RTVRAG-------GYHSVALREDGTVWTWGHNGQGQLGDGTV 1341

Query: 416  NNQ 418
              +
Sbjct: 1342 TTR 1344



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 164/372 (44%), Gaps = 44/372 (11%)

Query: 45  NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIR-IIQAAA 102
            S+  AG  HS+ VT  G V+++G N SGQLG G+   +   R + + + G+  +   AA
Sbjct: 50  TSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQ---RVVAQQVPGLTDVTSIAA 106

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   ++ +     V+ +G ++ G+   G    +   +PQ V  L ++  V  A G F + 
Sbjct: 107 GDAHSLALRADRTVWTWGGNNAGQVGDGTNVDR--PTPQKVPGLSDVVAV--AAGEFHSL 162

Query: 163 VLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            L  +G V+  +WG++   +LG  H++P    P  ++G      VV +AAG+ + LA+  
Sbjct: 163 ALRADGTVW--AWGSNFYGQLGRGHSQPGP-SPAQVVGL---TGVVALAAGFDFSLAVRS 216

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             +   V++ G    G+LG G+      P  + Q Q ++     V AG +HA  +  DG 
Sbjct: 217 DGT---VWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVS----AVTAGLYHALALRSDGT 269

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG    G +G G       P  VQ  +  +A  VA  D  + V+ +DG V+++G   
Sbjct: 270 VWAWGSNSSGQMGDGTWTDR--PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNS 327

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG    AD           P  V  L  V                 H   L   G L
Sbjct: 328 QGQLGIGTTADSP--------LPVRVRGLGAVTSLAAGTQ---------HAVVLRADGTL 370

Query: 400 YAFGAGDKGQLG 411
           + +G G  GQLG
Sbjct: 371 WTWGHGATGQLG 382



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 158/380 (41%), Gaps = 37/380 (9%)

Query: 34   LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 93
            +LA    C R  S   AG  HS+ +   G V+S+G NS GQLG G       P  +  L 
Sbjct: 793  VLARNLPCARAAS---AGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLW 849

Query: 94   GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            G  ++   AG   +M++   G V+ +G +  G+   G  G +   SP  V+ L  I    
Sbjct: 850  G--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDR--ASPLEVKGLAGI--AT 903

Query: 154  AAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
              +G     V+S++G V+  +WG + R  LG  T  +   P  + G       + ++ G 
Sbjct: 904  GVMGEAHALVVSQDGTVW--AWGANGRGQLGDGTTTSSASPVRVAGLSA---AMNVSVGQ 958

Query: 212  CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
             Y  +LA  P G  V+S G    G+LG G+      P+ ++    +      V AGA H 
Sbjct: 959  AY--SLAVLPDGT-VWSWGANDSGQLGDGTNVARTTPKPVQDLADVK----AVTAGAHHV 1011

Query: 272  AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
              V  DG V  WG   +G +G G       P  V+ L  + A+  + G+  +  +  D  
Sbjct: 1012 VAVRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGL--LNAVETSAGEQHSLALLGDER 1069

Query: 332  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
              S+G  E   LG     D +         P L     ++    V +   +   W+ H  
Sbjct: 1070 ALSWGSHEYGQLG-----DAESG-------PSLEPVGVKLPSSKVLVPAVSVSAWHQHAA 1117

Query: 392  ALTESGKLYAFGAGDKGQLG 411
            AL   G +  +G    GQLG
Sbjct: 1118 ALLADGTVQTWGGNADGQLG 1137



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 41/371 (11%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR-TMLISD 112
            H+ A+ + G V ++G N+ GQLG GTTE   R  PI ++ G+  + A A A R T+ +  
Sbjct: 1115 HAAALLADGTVQTWGGNADGQLGDGTTES--RATPI-TVAGLGAMVAVAPAARHTLALRS 1171

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
             G V+A+G ++FG+   G    +  T P  V  L+ +  + A  G++ +  +  +G V+ 
Sbjct: 1172 DGTVWAWGDNTFGQLGDGSNTRR--TLPVQVVGLEKVTAIAA--GSYHSLAVREDGTVWA 1227

Query: 173  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
            + +    +LG  T      P  +LG L+    V +A G  + L L    +   +++ G  
Sbjct: 1228 WGYNVFGQLGDGTMDARAVPTRMLG-LDG--AVAVAGGEYHSLMLRFDGT---LWATGNN 1281

Query: 233  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G+LG G+ T+   P     FQ++ L  V  V AG +H+  + +DG V TWG    G L
Sbjct: 1282 SHGQLGEGTFTNRLSP-----FQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQL 1336

Query: 292  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G G      VP  V  L  + +  V  G   TF V    + +++G      LG    +D 
Sbjct: 1337 GDGTVTTRRVPAPVPGLTAIAS--VGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDSSD- 1391

Query: 352  QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    L P LV  L  V   +              + A    G   ++G    G LG
Sbjct: 1392 -------RLEPTLVKGLHGVKSVLAGGDF---------SVAQGADGSAMSWGTNVHGTLG 1435

Query: 412  IELVNNQTERG 422
            I L   +T  G
Sbjct: 1436 IGLPGQRTVPG 1446



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 155/368 (42%), Gaps = 39/368 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S  + G  HS+A+   G + ++G N+ GQ G G          +  L GI+++ A+    
Sbjct: 652 SSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGAS--YL 709

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             + + + G +  +G + FG+   G  G   +  P  V  L     + A  G   + ++ 
Sbjct: 710 HVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--PVQVRGLGQGRRLSA--GRAHSLLVR 765

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGM 224
            +G V  +      +LG  +  +   P        N+P  + A AG  + L LAC  +  
Sbjct: 766 ADGTVLAWGQNTSGQLGDGSTTHRASPV----LARNLPCARAASAGRQHSLVLACDGT-- 819

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+S G    G+LG G  T   +P  +E    +    V V AG   + V+  DG V TWG
Sbjct: 820 -VWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGV----VAVLAGGDSSMVLRADGTVWTWG 874

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G LG G     + P  V+ L  +       G+    VVS+DG V+++G      LG
Sbjct: 875 ANGSGQLGDGTLGDRASPLEVKGLAGIAT--GVMGEAHALVVSQDGTVWAWGANGRGQLG 932

Query: 345 HNAIADGQGNRHANVLTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
                DG     A   +P  V  L   +N  V Q          A++ A+   G ++++G
Sbjct: 933 -----DGTTTSSA---SPVRVAGLSAAMNVSVGQ----------AYSLAVLPDGTVWSWG 974

Query: 404 AGDKGQLG 411
           A D GQLG
Sbjct: 975 ANDSGQLG 982



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 18/256 (7%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS+AV   G V+++G N  GQLG GT +   R  P R L     +  A G   +++
Sbjct: 1211 AGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA--RAVPTRMLGLDGAVAVAGGEYHSLM 1268

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G ++A G +S G+   G    +L  SP  V  L  +  V+A  G + +  L  +G 
Sbjct: 1269 LRFDGTLWATGNNSHGQLGEGTFTNRL--SPFQVVELDQVRTVRA--GGYHSVALREDGT 1324

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+T+      +LG  T      P P+ G      +  + AG  +  A+  +      ++ 
Sbjct: 1325 VWTWGHNGQGQLGDGTVTTRRVPAPVPGL---TAIASVGAGTSHTFAVGSE-----TWAW 1376

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G    G+LG G  +D   P L++    +      V AG   +   G DG   +WG   +G
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLVKGLHGVK----SVLAGGDFSVAQGADGSAMSWGTNVHG 1432

Query: 290  CLGHGNEECESVPKVV 305
             LG G     +VP  V
Sbjct: 1433 TLGIGLPGQRTVPGAV 1448



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 46/383 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H +A+ + G V+++G N +GQLG GTT +   P  +  L G+  +  AAGA  ++ 
Sbjct: 506 SGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV--AAGAYFSLA 563

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G D F E + G        SP  V  L    VV+ A G      +  +G 
Sbjct: 564 LRTDGTVWAWG-DGF-EGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGT 619

Query: 170 VYTFSWGNDARLGHHTEPND---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           V+ +    + ++G  +  +    V+ + L G      V  +  G  + +ALA   +   +
Sbjct: 620 VWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG------VSSVVGGLYHSMALAQDGT---L 670

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGW 285
            + G    G+ G G  T    PR++    +  L  + ++ A   H   V +DG + TWG+
Sbjct: 671 RAWGGNAYGQFGDGGVT----PRVVAG-AVPGLSGIKLLGASYLHVLAVREDGMLLTWGY 725

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            R+G LG G     S+P  V+ L   +   ++ G   + +V  DG V ++G   S  LG 
Sbjct: 726 NRFGQLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSLLVRADGTVLAWGQNTSGQLGD 783

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            +      +R + VL   L  +      R              H+  L   G ++++G  
Sbjct: 784 GSTT----HRASPVLARNLPCARAASAGR-------------QHSLVLACDGTVWSWGGN 826

Query: 406 DKGQLGIELVNNQTERGNPERVD 428
            +GQLG   V   T R  P +V+
Sbjct: 827 SQGQLGDGGV---TSRAYPAKVE 846



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 29/224 (12%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  IAAG  + LAL    +   V++ G    G++G G+  D   P+ +     +    V 
Sbjct: 101 VTSIAAGDAHSLALRADRT---VWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDV----VA 153

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           VAAG +H+  +  DG V  WG   YG LG G+ +    P  V  L  V A+  A G   +
Sbjct: 154 VAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVAL--AAGFDFS 211

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             V  DG V+++G   S  LG     DG    +   L P  V+ L+ V+      ++T  
Sbjct: 212 LAVRSDGTVWAWGANGSGQLG-----DGT---YIQRLAPTQVSQLQGVS------AVTAG 257

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           +Y   H  AL   G ++A+G+   GQ+G       T+R +P +V
Sbjct: 258 LY---HALALRSDGTVWAWGSNSSGQMGD---GTWTDRPSPVQV 295


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 10/294 (3%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
           + VT    V+  G N SG LG G  +    P+ + SL G +I   + G+G   +L ++ G
Sbjct: 76  LYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 135

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +VY +G +++ +   G     LV   Q+  +L N  V++ A G+  + VL+ +G VYT+ 
Sbjct: 136 EVYTWGHNAYSQLGNGTTNHGLVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG 194

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           + N  ++G  +  N   P  +   L+N  VV IA G   + ++A   +G  VY  G    
Sbjct: 195 YNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACG--QMCSMAVVENG-EVYVWGYNGN 251

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LG GS  ++  P  I   Q + +Q   VA G  H  V+  +G++  WG   YG LG G
Sbjct: 252 GQLGLGSSGNQPTPCRIAALQGIRVQR--VACGCAHTLVLTDEGQIYAWGANSYGQLGTG 309

Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
           N+  +S P  V    D V  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 310 NKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 363



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 12/241 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T +G VY++G N+  QLG+GTT     P  + + L   ++I+ A G+  +M
Sbjct: 124 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSM 182

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VY +G ++ G+   G    + +  P+ V S L+N  VV  A G   +  +   
Sbjct: 183 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKVVVNIACGQMCSMAVVEN 240

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A G  + L L  +     +
Sbjct: 241 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ---I 295

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y+ G    G+LG G+++++ +P  +   +   ++ +     A  +A   Q G+V  WG  
Sbjct: 296 YAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIE-IAACHSAHTSAAKTQSGQVYMWGQC 354

Query: 287 R 287
           R
Sbjct: 355 R 355



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           +   G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR + S LQ   ++  A G  
Sbjct: 173 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQM 232

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T VL+
Sbjct: 233 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLT 290

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            EG++Y +   +  +LG   + N  + +P   T++   V++IAA
Sbjct: 291 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVTVDKDRVIEIAA 332



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 137 VYTWGHNAYSQLGNGTTNHGLVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 195

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 255

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 256 LGS----SGNQP----TPCRIAALQGIRVQRVACGC-------AHTLVLTDEGQIYAWGA 300

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V +D
Sbjct: 301 NSYGQLG---TGNKSNQSYPTTVTVD 323



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E+ +L+  Q  V  +       V ++  V   G    GCLG G+ +    PK + +L   
Sbjct: 57  EELKLIR-QACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGK 115

Query: 312 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 369
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +  ++  Q+ T+L 
Sbjct: 116 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGLVPCQVSTNL- 166

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 167 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 209


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 173/394 (43%), Gaps = 40/394 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   GP  +  + S   V+ +G      L +  T +   P  + S   + +   A G   
Sbjct: 214 KTFEGPRAACRLDSLKDVFFWGDAFGSILDYDDTSKSL-PMLVDSTNMLDVQSIACGETH 272

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             +I+  G+VY++G +S G    G Q    V+ P+LVES+ ++ V   A G+     ++ 
Sbjct: 273 AAIITKQGEVYSWGNESSGG--IGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTV 330

Query: 167 EGRVYTFSWGNDARLGH-HTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            G +  F WG    +G      N++  PH L   L+ I VV+IA G  +   +    S  
Sbjct: 331 SGEL--FEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIIT---SSG 385

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 276
            +Y+ G G  G LGHG       P+ +E  +   ++   VA G WH A + +        
Sbjct: 386 QLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVK--CVACGPWHTAAIVEVLSDFKSN 443

Query: 277 --DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
               ++ TWG    G LGH +++ + +P  V +L D   I V+ G   T V+S  G V++
Sbjct: 444 SPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFT 503

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            G      LG         N HA+  T   V  L +  E V  IS  +S     H   LT
Sbjct: 504 IGSSMHGQLG---------NPHADGRTVCAVEGLLKT-EFVRHISSGSS-----HVAVLT 548

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            +GK++ +G G +GQLG+    +   R  P  VD
Sbjct: 549 TNGKVFTWGKGKEGQLGL---GDYLNRSTPTLVD 579



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 155/346 (44%), Gaps = 77/346 (22%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-------------- 91
           Q+IA G  H+  +T +G VYS+G+ SSG +G+    +  RP+ + S              
Sbjct: 264 QSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSK 323

Query: 92  ---------------------------------------LQGIRIIQAAAGAGRTMLISD 112
                                                  L GI +++ A G   T +I+ 
Sbjct: 324 HACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITS 383

Query: 113 AGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
           +GQ+Y +G  +FG   +G  QGT   T P+ VE LK   V   A G + TA +       
Sbjct: 384 SGQLYTYGDGTFGVLGHGDTQGT---TRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDF 440

Query: 165 -SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            S   R   F+WG+  R  LGH  +   + P   + +L +   +Q++ G    + L+   
Sbjct: 441 KSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLTDYDFIQVSCGMALTVVLSI-- 497

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           +G+ V+++G  + G+LG+    D +    +E   LL  + V  +++G+ H AV+  +G+V
Sbjct: 498 TGV-VFTIGSSMHGQLGN-PHADGRTVCAVE--GLLKTEFVRHISSGSSHVAVLTTNGKV 553

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            TWG G+ G LG G+    S P +V AL   +   ++ G +YT  V
Sbjct: 554 FTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAV 599



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 35/303 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +Y++G  + G LGHG T+   RP+ +  L+G R+   A G   T  I
Sbjct: 374 GPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAI 433

Query: 111 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                     S   +++ +G    G+  +  +  KL+  P  V+SL +   +Q + G   
Sbjct: 434 VEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLI--PTCVDSLTDYDFIQVSCGMAL 491

Query: 161 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           T VLS  G V+T       +LG+ H +   V    + G L+   V  I++G  ++  L  
Sbjct: 492 TVVLSITGVVFTIGSSMHGQLGNPHADGRTV--CAVEGLLKTEFVRHISSGSSHVAVLT- 548

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVV 274
             +   V++ G G  G+LG G   +   P L++  +   ++ +       AA   H  + 
Sbjct: 549 --TNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAVCLHKIIS 606

Query: 275 GQDGRVCT-----WGWGR--YGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 322
            +D  VC+     +G+ R  + C   G+  C S     V +   A + ++   V  G ++
Sbjct: 607 RKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVARAALAPDKIRRYRVCDGCFS 666

Query: 323 TFV 325
             +
Sbjct: 667 QLL 669


>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 424

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 180/401 (44%), Gaps = 53/401 (13%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEE----------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + +VY++G++  G  GH  +EE           +RP+ + SLQ   I   A G G T+ +
Sbjct: 29  RSIVYAWGNSDGGWTGHLPSEEYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFV 88

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  GQVY+ G   +G+   G+   K V    L++S+    V+  A G+  +  ++ +G +
Sbjct: 89  TQQGQVYSSGVGRYGQL--GLGSLKEVEGITLIDSIPEK-VITCAAGDRHSLFVTEQGHL 145

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           Y+  +G    LG  T    +E   L+ +L  E   ++++AAG+ + +AL+   SG  VYS
Sbjct: 146 YSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALS--ESG-KVYS 202

Query: 229 VGCGLGGKLGHGS--------------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            G    G LGHG               R  E  PRLI   +   ++   ++ G+ HA  +
Sbjct: 203 FGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQME--YISCGSGHAFAI 260

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            ++G    WG GRY C    NE     P+ +  L       + +G   T  +++ G V++
Sbjct: 261 NKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPGPWK-QIVSGGAHTLGLTKGGQVWA 319

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G      L       G G +  +   P++V  L Q  +  +Q       +    + A+ 
Sbjct: 320 WGVNHFGCL-------GVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFF----SMAVD 368

Query: 395 ESGKLYAFGAGDKGQLGI-------ELVNNQTERGNPERVD 428
             G +Y++G G  G LG        E V  Q E+G P +VD
Sbjct: 369 SEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVD 409



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSL--QGIRIIQAAAGAGR 106
           AG  HS+ VT +G +YS G    G+LG GT       P+ + SL  +  +II+ AAG G 
Sbjct: 131 AGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGF 190

Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQA 154
           ++ +S++G+VY+FG  + G   +G V G             + TSP+L+ +L+   +   
Sbjct: 191 SIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYI 250

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           + G+     +++EG  + +  G         E N  +P  L       P  QI +G  + 
Sbjct: 251 SCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHT 308

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAA 272
           L L     G  V++ G    G LG G  RT    PR++E+      +P+  +AAG + + 
Sbjct: 309 LGLT---KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSM 365

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            V  +G V +WG G  G LG G EE +  P  +Q
Sbjct: 366 AVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQ 399



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 109/258 (42%), Gaps = 29/258 (11%)

Query: 38  EACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--------------E 81
           E+  R E    +  AG G SIA++  G VYSFGS + G LGHG                 
Sbjct: 172 ESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRN 231

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
            E  PR IR+L+  ++   + G+G    I+  G  + +G   +    +          PQ
Sbjct: 232 METSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY--HCFATDNEVNWEQPQ 289

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGT 198
            +  L   +  Q   G   T  L++ G+V+ +   +   LG     T P   EP  +   
Sbjct: 290 ALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPG--EPRIVEKL 346

Query: 199 LENI--PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
           L+    P+  IAAG+ + +A+  +     VYS G G  G LG G   D+  P  I+  Q 
Sbjct: 347 LQQAKEPIQWIAAGWFFSMAVDSEG---YVYSWGRGHAGALGTGEEEDKWEPVAIQNEQG 403

Query: 257 LNLQPVVVAAGAWHAAVV 274
             LQ   + AG  +A  V
Sbjct: 404 EPLQVDRIYAGFNYAIAV 421



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRT 107
           AG   S+AV S+G VYS+G   +G LG G  E++W P  I++ QG  +++ +  AG    
Sbjct: 359 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 418

Query: 108 MLISD 112
           + + D
Sbjct: 419 IAVKD 423


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 38/347 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q   G+    L +  G+V+ +G++  G   +G      ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVES 304

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L    V   + G F T  +S  G +  F+WG+ +     LG+ T  +   P  + G LE 
Sbjct: 305 LSVTIVDFISCGEFHTCAISASGDL--FNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEG 362

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ +A G  +   +    S   +Y+ G G  G LGHG+R    +P+ +E   L   + 
Sbjct: 363 LQVLSVACGSWHSALIT---STGRLYTFGDGKFGALGHGNRESAAYPKEVEA--LNGFRT 417

Query: 262 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           V VA G WH+A + +            ++ TWG G    LG G++E   +P  +QAL + 
Sbjct: 418 VKVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH 477

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               +  G   T  ++  G VY+ G  ++  LG N  +DG+         P LV   K  
Sbjct: 478 NFHQLGCGQNMTVALATSGHVYTMGSSDNGQLG-NPKSDGKH--------PCLVKD-KLA 527

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           NE V +IS        AH   LT   ++Y +G G  G+LG   +N++
Sbjct: 528 NELVEEISCGA-----AHVAVLTSRSEVYTWGLGANGRLGHGDLNDK 569



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+++ G ++++G  S  +G LG+ T    W P+ +   L+G++++  A G+  +
Sbjct: 316 GEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHS 375

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            LI+  G++Y FG   FG   +G + +     P+ VE+L     V+ A G + +A +   
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRES--AAYPKEVEALNGFRTVKVACGVWHSAAIVEA 433

Query: 168 G----------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                      ++YT+  G+  RLG   +   + P  L   LE+    Q+  G    +AL
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH-NFHQLGCGQNMTVAL 492

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A   SG  VY++G    G+LG+  ++D KHP L++  +L N     ++ GA H AV+   
Sbjct: 493 AT--SGH-VYTMGSSDNGQLGN-PKSDGKHPCLVKD-KLANELVEEISCGAAHVAVLTSR 547

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
             V TWG G  G LGHG+   +  P +V+AL D     ++ G ++TT +
Sbjct: 548 SEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCI 596



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 32/287 (11%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q   G+   A+ +R+G V+T  WG +   RLGH T+  D+    
Sbjct: 244 VLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFT--WGEELGGRLGHGTD-TDISRPK 300

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           L+ +L    V  I+ G  +  A++     +  +  G    G LG+ +      P+ +   
Sbjct: 301 LVESLSVTIVDFISCGEFHTCAISAS-GDLFNWGDGSYRAGLLGYDTGASHWLPKRVSG- 358

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  LQ + VA G+WH+A++   GR+ T+G G++G LGHGN E  + PK V+ALN  + +
Sbjct: 359 PLEGLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTV 418

Query: 315 HVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
            VA G + +  + E             +Y++G G+   L       GQG++ A  L P  
Sbjct: 419 KVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRL-------GQGDKEAR-LIPTC 470

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + +L + N    Q+    ++     T AL  SG +Y  G+ D GQLG
Sbjct: 471 LQALLEHN--FHQLGCGQNM-----TVALATSGHVYTMGSSDNGQLG 510



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS  +TS G +Y+FG    G LGHG  E    P+ + +L G R ++ A G   +  I
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAI 430

Query: 111 SDAG----------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +A           ++Y +G         G +  +L+  P  +++L      Q   G   
Sbjct: 431 VEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLI--PTCLQALLEHNFHQLGCGQNM 488

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLALA 218
           T  L+  G VYT    ++ +LG+   P     HP L    L N  V +I+ G  ++  L 
Sbjct: 489 TVALATSGHVYTMGSSDNGQLGN---PKSDGKHPCLVKDKLANELVEEISCGAAHVAVLT 545

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAV 273
              S   VY+ G G  G+LGHG   D+K P ++E  +  +++ +   +        H  V
Sbjct: 546 ---SRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCICIHRWV 602

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
            G D  VCT       +   R+ C   G   C   S  KV++A
Sbjct: 603 SGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKA 645


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 43/386 (11%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           TS   ++ +G      L HG   +     PR + +   I +   A G     +++  G+V
Sbjct: 177 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 236

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           +++G D+ G   + V  +  V+ P+++ESL +  V   A G   T  +S  G +Y   WG
Sbjct: 237 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 292

Query: 177 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                    G   + +   PH L G L+ I +++IA G+ +   ++   S   +++ G G
Sbjct: 293 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQIFTYGDG 349

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCT 282
             G LGHG       P+ +E   L  ++   +A G WH A +             G++ T
Sbjct: 350 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 407

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LGH +++ + VP  V+ LND     V+     T V++  G V++ G  E   
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+    D          T   +       E V +IS  +S     H   LT +GK++ +
Sbjct: 468 LGNPLSED----------TSICLIEGPLKTEFVREISSGSS-----HIAVLTMNGKVFTW 512

Query: 403 GAGDKGQLGIELVNNQTERGNPERVD 428
           G G +GQLG+    +  +R  P  V+
Sbjct: 513 GKGTEGQLGL---GDYVDRSYPTLVE 535



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 146/300 (48%), Gaps = 34/300 (11%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
           +AIA G  H+ AV+  G +Y +G  +   G  G      +W P  +   L GI I++ A 
Sbjct: 270 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 329

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T +IS AGQ++ +G  +FG   +G   T  V  P+ VESLK +     A G + TA
Sbjct: 330 GHWHTAIISSAGQIFTYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 387

Query: 163 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 207
            ++ R G V +       F+WG+  R  LGH  +     P  VEP      L +    Q+
Sbjct: 388 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 441

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
           +      + L    +G+ V+++G    G+LG+   +++    LIE    L  + V  +++
Sbjct: 442 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 495

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   +A G   T  +
Sbjct: 496 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q       +I +T  GVV++ GS   G+LG+  +E+         L+   + + ++G+ 
Sbjct: 439 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 498

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              +++  G+V+ +GK +  E + G+      + P LVE+L++  V   A G  FT  +
Sbjct: 499 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 59/376 (15%)

Query: 40  CCRRENSQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLG------HGTTEEEWRPRPIR 90
           C   ++ Q IA   G  H++ +T +G VY+ G N  GQLG      H     E    P  
Sbjct: 36  CKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDE 95

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           +    +    AAG   +  IS+ G+VY +G+++ G+   G +G   V + Q VESLK+  
Sbjct: 96  A----KFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFR 151

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGH------------HTEPNDVEPHPLL 196
           +   A+G   +  LS EG V   SWG   + RLGH              + ++  P  L+
Sbjct: 152 IQALALGAEHSLALSEEGEV--LSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPR-LV 208

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
               ++ V ++AAG   L   AC     ++++ G G   +LG G   D   P+ +     
Sbjct: 209 KGFRDVKVSKVAAG---LTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRV----- 260

Query: 257 LNLQPVV-----VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQ-AL 308
               PV+     +A G +H   + ++G++  WG   YGCLG G  ++   S+P +V+ AL
Sbjct: 261 ----PVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGAL 316

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES-ASLGHNAIADGQ----GNRHANVLTPQ 363
             ++   V  G   T  ++ DGDV+++G G S  + G + ++ G     GN + + L P 
Sbjct: 317 ESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNEN-DFLEP- 374

Query: 364 LVTSLKQVNERVVQIS 379
             T +K  N + +QIS
Sbjct: 375 --TQVKSKNMKAIQIS 388



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 43/366 (11%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG  + E  W P   +S+Q ++ I  A G   T+++++ G+VYA G + +G+
Sbjct: 14  WGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQ 73

Query: 127 AEYGVQGTKLVTSPQL----VESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
                 G  L T   +    VE L +       A G+F +A +S +GRVY +      +L
Sbjct: 74  L-----GLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQL 128

Query: 182 GHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           G        V     + +L++  +  +A G  + LAL+ +     V S G  L G+LGHG
Sbjct: 129 GLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGE---VLSWGTSLNGRLGHG 185

Query: 241 S------------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
                        ++ E  PRL++ F+  +++   VAAG  H+A + + G + T+G GR 
Sbjct: 186 EGHRSSSMFSIFRKSSEYTPRLVKGFR--DVKVSKVAAGLTHSACLDEQGSLFTFGKGRE 243

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
             LG G +   S PK V  +  V+ I  A G Y T  +S +G +Y +G  E   LG    
Sbjct: 244 CQLGLGGDRDISEPKRVPVIPPVEEI--ACGGYHTGAISRNGQLYMWGSNEYGCLGF--- 298

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG-AGDK 407
               G +H N  +  ++      + RV Q+       W  HT ALT  G ++A+G  G +
Sbjct: 299 ----GYKHQNATSLPMLVEGALESLRVTQVQCG----WK-HTMALTVDGDVFAWGWGGSQ 349

Query: 408 GQLGIE 413
           G  G++
Sbjct: 350 GTHGVD 355



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG G YG LG  + E    P V +++  ++ I +A G   T V++E+G VY+ G  +
Sbjct: 11  VALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLND 70

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG               L+        +V     +   T+    + H+ A++E G++
Sbjct: 71  WGQLGLP-------------LSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRV 117

Query: 400 YAFGAGDKGQLGI 412
           Y +G   +GQLG+
Sbjct: 118 YMWGRNTQGQLGL 130


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 25/373 (6%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+S G NS G+LGHG T        I++LQ   IIQ  AG   T++++  G+V+  G + 
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYND 623

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            G+   G  GT  V+    +  + +      A  G   T ++S +GRV T  +    +LG
Sbjct: 624 NGQCGQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLG 681

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGS 241
           H    ++  P  ++ +LEN  V  ++  Y Y   LAC+   +  +Y+ G    G+LGH  
Sbjct: 682 HGNTTSESVPK-IIRSLENKIVRLVSCSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHND 739

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
             D K P+ +E   L + Q V VA G +H  VV   G+   +G   YG LG    E +  
Sbjct: 740 SIDRKIPQFVE--ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLA 797

Query: 302 PKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV- 359
           P  V+  L   + + +  G Y T  +     +++FG  +   LG   +     +  +N+ 
Sbjct: 798 PVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG---LGRSNASSTSNLQ 854

Query: 360 LTPQLVTSLKQVNE----RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           L  Q  ++ + ++E     +V+I+     Y   HT A++++G +Y FG  + GQLG    
Sbjct: 855 LQQQRFSNARLIDELEGKDIVRIAC--GCY---HTIAVSDNGVMYVFGRNNHGQLG---T 906

Query: 416 NNQTERGNPERVD 428
            + TER  P  +D
Sbjct: 907 GDTTERVYPFPID 919



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 22/297 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           + A  G  H+I V++ G V + G N  GQLGHG T  E  P+ IRSL+   +   +    
Sbjct: 651 AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYY 710

Query: 106 RTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            T+L  + G    +Y FG++ +G+  +     + +  PQ VE+L +  +V  A G + T 
Sbjct: 711 HTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTM 768

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           V++  G+ + F   +  +LG  T  N + P  + G LE    ++I  GY + +AL    S
Sbjct: 769 VVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC---S 825

Query: 223 GMAVYSVGCGLGGKLGHG----SRTDE--------KHPRLIEQFQLLNLQPVVVAAGAWH 270
           G  +++ G    G+LG G    S T           + RLI++ +  ++  V +A G +H
Sbjct: 826 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDI--VRIACGCYH 883

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              V  +G +  +G   +G LG G+      P  +      +   VA G Y T V++
Sbjct: 884 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)

Query: 107 TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           T+   D G+  V++ G++S+GE  +G   ++   S + +++L+   ++Q   GN  T VL
Sbjct: 553 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 610

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G+V+T  + ++ + G             +  L  IP +   +   +     C+ + +
Sbjct: 611 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 662

Query: 225 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG- 278
                 V + G    G+LGHG+ T E  P++I   +  N    +V+   +H  +  +DG 
Sbjct: 663 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 720

Query: 279 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
              + T+G   YG LGH +     +P+ V+AL+D + + VA G Y T VV+  G  ++FG
Sbjct: 721 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFG 780

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             +   LG + +         N L P     ++   ER   + +    Y   HT AL   
Sbjct: 781 KNDYGQLGIDTM--------ENQLAP---VQVRGGLERQECLEIRCGYY---HTIALCSG 826

Query: 397 GKLYAFGAGDKGQLGI 412
             L+AFG  D GQLG+
Sbjct: 827 AHLFAFGRNDYGQLGL 842



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 96
           EA   ++      G  H++ VT+ G  ++FG N  GQLG  T E +  P  +R  L+   
Sbjct: 750 EALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQE 809

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ----------LVESL 146
            ++   G   T+ +     ++AFG++ +G+   G       ++ Q          L++ L
Sbjct: 810 CLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDEL 869

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
           +   +V+ A G + T  +S  G +Y F   N  +LG       V P P +       V  
Sbjct: 870 EGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP-IDDFVGKRVAL 928

Query: 207 IAAGYCYLLALA 218
           +AAG+ + + L 
Sbjct: 929 VAAGFYHTVVLT 940



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+IAV+  GV+Y FG N+ GQLG G T E   P PI    G R+   AAG   T++++  
Sbjct: 883 HTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLTGG 942

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSR 166
            +     +DS  E E   +     +SP  Q+   L  + ++QA +     + L++
Sbjct: 943 KEDDKNERDSGNEKE---ELAACFSSPRLQMYMILATLRILQANLSQMLRSGLAK 994


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 10/294 (3%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
           + VT    V+  G N SG LG G  +    P+ + SL G +I   + G+G   +L ++ G
Sbjct: 75  LYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 134

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +VY +G +++ +   G     LV   Q+  +L N  V++ A G+  + VL+ +G VYT+ 
Sbjct: 135 EVYTWGHNAYSQLGNGTTNHGLVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG 193

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           + N  ++G  +  N   P  +   L+N  VV IA G   + ++A   +G  VY  G    
Sbjct: 194 YNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACG--QMCSMAVVENG-EVYVWGYNGN 250

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LG GS  ++  P  I   Q + +Q   VA G  H  V+  +G++  WG   YG LG G
Sbjct: 251 GQLGLGSSGNQPTPCRIAALQGIRVQR--VACGCAHTLVLTDEGQIYAWGANSYGQLGTG 308

Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
           N+  +S P  V    D V  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 309 NKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 362



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T +G VY++G N+  QLG+GTT     P  + + L   ++I+ A G+  +M
Sbjct: 123 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSM 181

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VY +G ++ G+   G    + +  P+ V S L+N  VV  A G   +  +   
Sbjct: 182 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKVVVNIACGQMCSMAVVEN 239

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A G  + L L  +     +
Sbjct: 240 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ---I 294

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y+ G    G+LG G+++++ +P  +       +  +     A  +A   Q G+V  WG  
Sbjct: 295 YAWGANSYGQLGTGNKSNQSYPTTV-TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQC 353

Query: 287 R 287
           R
Sbjct: 354 R 354



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           +   G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR + S LQ   ++  A G  
Sbjct: 172 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQM 231

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T VL+
Sbjct: 232 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLT 289

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            EG++Y +   +  +LG   + N  + +P   T++   VV+IAA
Sbjct: 290 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVTVDKDRVVEIAA 331



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 136 VYTWGHNAYSQLGNGTTNHGLVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 194

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 195 NNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 254

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 255 LGS----SGNQP----TPCRIAALQGIRVQRVACGC-------AHTLVLTDEGQIYAWGA 299

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V +D
Sbjct: 300 NSYGQLG---TGNKSNQSYPTTVTVD 322



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E+ +L+  Q  V  +       V ++  V   G    GCLG G+ +    PK + +L   
Sbjct: 56  EELKLIR-QACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGK 114

Query: 312 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 369
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +  ++  Q+ T+L 
Sbjct: 115 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGLVPCQVSTNL- 165

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 166 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 208


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 25/373 (6%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+S G NS G+LGHG T        I++LQ   IIQ  AG   T++++  G+V+  G + 
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYND 434

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            G+   G  GT  V+    +  + +      A  G   T ++S +GRV T  +    +LG
Sbjct: 435 NGQCGQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLG 492

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGS 241
           H    ++  P  ++ +LEN  V  ++  Y Y   LAC+   +  +Y+ G    G+LGH  
Sbjct: 493 HGNTTSESVPK-IIRSLENKIVRLVSCSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHND 550

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
             D K P+ +E   L + Q V VA G +H  VV   G+   +G   YG LG    E +  
Sbjct: 551 SIDRKIPQFVE--ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLA 608

Query: 302 PKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV- 359
           P  V+  L   + + +  G Y T  +     +++FG  +   LG   +     +  +N+ 
Sbjct: 609 PVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG---LGRSNASSTSNLQ 665

Query: 360 LTPQLVTSLKQVNE----RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
           L  Q  ++ + ++E     +V+I+     Y   HT A++++G +Y FG  + GQLG    
Sbjct: 666 LQQQRFSNARLIDELEGKDIVRIAC--GCY---HTIAVSDNGVMYVFGRNNHGQLG---T 717

Query: 416 NNQTERGNPERVD 428
            + TER  P  +D
Sbjct: 718 GDTTERVYPFPID 730



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 22/297 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           + A  G  H+I V++ G V + G N  GQLGHG T  E  P+ IRSL+   +   +    
Sbjct: 462 AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYY 521

Query: 106 RTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            T+L  + G    +Y FG++ +G+  +     + +  PQ VE+L +  +V  A G + T 
Sbjct: 522 HTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTM 579

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           V++  G+ + F   +  +LG  T  N + P  + G LE    ++I  GY + +AL    S
Sbjct: 580 VVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC---S 636

Query: 223 GMAVYSVGCGLGGKLGHG----SRTDE--------KHPRLIEQFQLLNLQPVVVAAGAWH 270
           G  +++ G    G+LG G    S T           + RLI++ +  ++  V +A G +H
Sbjct: 637 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDI--VRIACGCYH 694

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              V  +G +  +G   +G LG G+      P  +      +   VA G Y T V++
Sbjct: 695 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)

Query: 107 TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           T+   D G+  V++ G++S+GE  +G   ++   S + +++L+   ++Q   GN  T VL
Sbjct: 364 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 421

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G+V+T  + ++ + G             +  L  IP +   +   +     C+ + +
Sbjct: 422 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 473

Query: 225 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG- 278
                 V + G    G+LGHG+ T E  P++I   +  N    +V+   +H  +  +DG 
Sbjct: 474 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 531

Query: 279 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
              + T+G   YG LGH +     +P+ V+AL+D + + VA G Y T VV+  G  ++FG
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFG 591

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             +   LG + +         N L P     ++   ER   + +    Y   HT AL   
Sbjct: 592 KNDYGQLGIDTM--------ENQLAP---VQVRGGLERQECLEIRCGYY---HTIALCSG 637

Query: 397 GKLYAFGAGDKGQLGI 412
             L+AFG  D GQLG+
Sbjct: 638 AHLFAFGRNDYGQLGL 653



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 12/192 (6%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 96
           EA   ++      G  H++ VT  G  ++FG N  GQLG  T E +  P  +R  L+   
Sbjct: 561 EALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQE 620

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ----------LVESL 146
            ++   G   T+ +     ++AFG++ +G+   G       ++ Q          L++ L
Sbjct: 621 CLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDEL 680

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
           +   +V+ A G + T  +S  G +Y F   N  +LG       V P P +       +  
Sbjct: 681 EGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP-IDDFVGKRIAL 739

Query: 207 IAAGYCYLLALA 218
           +AAG+ + + L 
Sbjct: 740 VAAGFYHTVVLT 751


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 19/273 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS+A+T +  V+++G    GQLGHG   + W P  ++ LQG  I     G   
Sbjct: 95  QIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYEN 154

Query: 107 TMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           T  I+  G+V  F     GK   G+ + G+ G   V  P  ++SL    ++QA  G  F+
Sbjct: 155 TFAITGTGKVLGFGSAASGKLGNGDVDGGIGGN--VYLPVQLKSLAKFTIIQATGGKNFS 212

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLA 216
             LS  G++Y+  +  + +LG   E  +    P  GT++ +      V  ++ G  + LA
Sbjct: 213 MFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLA 272

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L+    G+ VYS G G+   LGHG   D   P+++    +L   P V V+AG +H+A V 
Sbjct: 273 LS--EDGI-VYSWGSGINWALGHGGTEDTFTPKMVA---MLEADPCVSVSAGGYHSAAVS 326

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
             GR+ TWG    G LG G    +     VQ L
Sbjct: 327 ATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRL 359



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 14/324 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++ ++  G VYS+G N S Q GHG  +  +W PR IR+L+ ++++Q AAG   ++ 
Sbjct: 46  GGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVA 105

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++D  +V+ +G+   G+  +G      V  P LV+ L+   +     G   T  ++  G+
Sbjct: 106 LTDRSEVFTWGRGLHGQLGHG--DVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK 163

Query: 170 VYTFSWGNDARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           V  F      +LG+      +  +   P+ L +L    ++Q   G  + + L+       
Sbjct: 164 VLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQ--- 220

Query: 226 VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +YSVG    G+LG      E     +   +++     +    V+ G  H+  + +DG V 
Sbjct: 221 LYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVY 280

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           +WG G    LGHG  E    PK+V  L     + V+ G Y +  VS  G +Y++G     
Sbjct: 281 SWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVG 340

Query: 342 SLGHNAIADGQGNRHANVLTPQLV 365
            LG     D     H   L  +++
Sbjct: 341 QLGTGQNIDDHSADHVQRLPTRVI 364



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 164/360 (45%), Gaps = 34/360 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPR---PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           VYS G  + G+LG    +E  R     P+ +LQ + +   A G    +L+S AG+VY++G
Sbjct: 6   VYSCGHGAGGRLG--LNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG 63

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            +   +  +GV+       P+ + +L+ + VVQ A G   +  L+    V+T+  G   +
Sbjct: 64  YNDSRQTGHGVEDLS-DWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQ 122

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LG H + +DV    L+  L+   +  I  GY    A+        V   G    GKLG+G
Sbjct: 123 LG-HGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK---VLGFGSAASGKLGNG 178

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
                    +    QL +L    +     G   +  +   G++ + G+   G LG   EE
Sbjct: 179 DVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEE 238

Query: 298 CESV----PKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            ES+       +Q ++   V   +V+ GD  +  +SEDG VYS+G G + +LGH    D 
Sbjct: 239 VESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTED- 297

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    TP++V  L    E    +S++   Y   H+ A++ +G++Y +G    GQLG
Sbjct: 298 -------TFTPKMVAML----EADPCVSVSAGGY---HSAAVSATGRIYTWGRNFVGQLG 343



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 16/246 (6%)

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           VY+   G   RLG + E         LGTL+++ V  +A G  + L L+       VYS 
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLS---RAGKVYSW 62

Query: 230 GCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           G     + GHG     +  PR I   + + +  V +AAG  H+  +     V TWG G +
Sbjct: 63  GYNDSRQTGHGVEDLSDWEPRWIRALETVKV--VQIAAGEDHSVALTDRSEVFTWGRGLH 120

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG+      P +V+ L       +  G   TF ++  G V  FG   S  LG+  +
Sbjct: 121 GQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDV 180

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G G    NV  P  + SL +    ++Q +   +      +  L+ +G+LY+ G    G
Sbjct: 181 DGGIG---GNVYLPVQLKSLAKFT--IIQATGGKNF-----SMFLSHTGQLYSVGYAANG 230

Query: 409 QLGIEL 414
           QLGI  
Sbjct: 231 QLGIPF 236


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 26/294 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +++ G LGHG+    W P+ +   ++GIR+   + GA  T
Sbjct: 350 GEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHT 409

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---- 163
            +++ AGQ++ FG  SFG   +G   T     P+ VE+L+ +   + A G + TA     
Sbjct: 410 AVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEA 467

Query: 164 ---LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
              LS  G        ++YT+  G+  RLGH      + P  +   +E   + Q+A G  
Sbjct: 468 INELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE-RICQVACGND 526

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
             +AL    +   VY++G    G+LG  +  + K P  +E  ++ N     VA G++H A
Sbjct: 527 LTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EIANSFVEEVACGSYHVA 581

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           V+     V TWG G  G LGHG+    + P +V  L D +  +VA G   T V+
Sbjct: 582 VLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 162/363 (44%), Gaps = 46/363 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+++++G++S G   +GV+    V+ P+++++
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDT 338

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G + T  ++  G +YT  WG    N   LGH +E +   P  + G +E 
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYT--WGDGTHNYGLLGHGSEVSHWIPQKVGGQMEG 396

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +    A   S   +++ G G  G LGHG       PR +E   L  L+ 
Sbjct: 397 IRVSYISCGAWH---TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRT 451

Query: 262 VVVAAGAWHAAVVGQ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
             VA G WH A   +                 ++ TWG G  G LGHG+ E   VP+ V 
Sbjct: 452 TKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVA 511

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
           AL + +   VA G+  T  ++  G VY+ G      LG +A A+G+         P  V 
Sbjct: 512 ALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGK--------LPTCVE 562

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 426
             +  N  V +++       + H   LT   ++Y +G G  GQLG     +   R  P  
Sbjct: 563 G-EIANSFVEEVACG-----SYHVAVLTSKNEVYTWGKGLNGQLGH---GDNNHRNTPTI 613

Query: 427 VDI 429
           VD+
Sbjct: 614 VDV 616



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 154/343 (44%), Gaps = 46/343 (13%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT +G ++S+G  S G+LGHG   +   P+ I +L G  +   A G   T  +
Sbjct: 298 GGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLV-ESLKNIFVVQAAIGNFFTAVLSR 166
           + +G +Y +G    G   YG+ G     S   PQ V   ++ I V   + G + TAV++ 
Sbjct: 358 TLSGDLYTWGD---GTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTS 414

Query: 167 EGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 216
            G+++TF  G+   LGH        P +VE      TL  +   ++A G  +  A     
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVE------TLRGLRTTKVACGVWHTAAAVEAI 468

Query: 217 -------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAG 267
                   +  PS   +Y+ G G  G+LGHG    +  PRL+ +    L+  +   VA G
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHG----DNEPRLVPECVAALIEERICQVACG 524

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 326
                 +   GRV T G   YG LG      + +P  V+  + +     VA G Y   V+
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVL 583

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +   +VY++G G +  LGH        N H N  TP +V  LK
Sbjct: 584 TSKNEVYTWGKGLNGQLGHG------DNNHRN--TPTIVDVLK 618



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           +G +    S+ D   P+ +E   +L++  +  A G  HA +V + G + +WG    G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           HG E   S PK++  L+      VA G+Y T  V+  GD+Y++G G      HN    G 
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGT-----HNYGLLGH 378

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           G+  ++ + PQ V    +     +++S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 379 GSEVSHWI-PQKVGGQME----GIRVSYISCGAW--HTAVVTSAGQLFTFGDGSFGALG 430



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS + GQLG  T   +        +    + + A G+  
Sbjct: 520 QVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYH 579

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK   G+  +G    +   +P +V+ LK+  V   A G+ FT V+
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHR--NTPTIVDVLKDKQVKNVACGSKFTVVI 635


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V+ P+L+++
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 158

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 159 LSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG 216

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E  +   L+ 
Sbjct: 217 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK--GLRT 271

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E + VP  V AL 
Sbjct: 272 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALV 331

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G         +A+    GN  A+ + P  V    
Sbjct: 332 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNTQADGMLPVRV---- 378

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 379 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 418



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  E    PR + SL+G+R ++AA G   T  +
Sbjct: 225 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 284

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV  P  V +L      Q A G+
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 342

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG +T+ + + P  + G L    V +I+ G  ++  L 
Sbjct: 343 CLTVALTTSGHVYTMGSAVYGQLG-NTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 401

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 402 ---SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 458

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 459 SGVDQSMCS 467



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I +L  + I   A G   T  ++ +
Sbjct: 121 HAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLS 180

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 181 GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFT 240

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 241 FGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSG 300

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P   +  L      Q+A G+C  +AL    +   VY+
Sbjct: 301 KIFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHCLTVALT---TSGHVYT 356

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+ ++ D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 357 MGSAVYGQLGN-TQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 414

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ + ++ P +V+AL D +   V  G
Sbjct: 415 GRLGHGDTDDKNTPTLVEALKDKQVRSVVCG 445



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  +  DV    L+ 
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVD-CDVSQPKLID 157

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 158 ALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG-PLE 215

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+ E  SVP+ V++L  ++ +  A
Sbjct: 216 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 275

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ A  L P  V
Sbjct: 276 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKEAK-LVPTCV 327

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 328 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NTQADGMLPV 376

Query: 426 RVD 428
           RV+
Sbjct: 377 RVE 379


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 155/297 (52%), Gaps = 14/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  VT  G +Y FGSN+ GQLG G+     +P  +++L+  ++  AA G   T++ 
Sbjct: 43  GDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLIC 102

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
           ++ G VYA G +S  E + G+  T+  ++  L+    K   + Q A G++ +AVL+ +G+
Sbjct: 103 TEQGNVYAAGGNS--EGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQ 160

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +  +   ++ ++G   +     PH + +G     PV  I+ GY Y  AL  Q     +Y+
Sbjct: 161 LVMWGDNSEGQIGLGDKAYVSVPHQVDIGK----PVSCISCGY-YHSALITQDG--ELYT 213

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    GKLG   +  + H +L +    ++ +   VA G  H  V+ + G V T+G G+Y
Sbjct: 214 FGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAE-GDVYTFGLGQY 271

Query: 289 GCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G LGHG    E S PK V  L   K  H+A G+  T +++E+G +Y+FG G    LG
Sbjct: 272 GQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 16/253 (6%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++  T +G VY+ G NS GQLG G TEE      I    +  +I Q AAG+  
Sbjct: 92  AACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYT 151

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           + ++++ GQ+  +G +S  E + G+     V+ P  V+  K +  +  + G + +A++++
Sbjct: 152 SAVLTEDGQLVMWGDNS--EGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQ 207

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI--PVVQIAAGYCYLLALACQPSGM 224
           +G +YTF    + +LG    P  ++ H L   +  I   V ++A G  + + LA      
Sbjct: 208 DGELYTFGEPENGKLG--LSPKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLA----EG 261

Query: 225 AVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            VY+ G G  G+LGHG+   E   P+ ++   L   +   +A G  H A++ ++G + T+
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSEPKTVD--HLGKHKICHIACGENHTALITENGLMYTF 319

Query: 284 GWGRYGCLGHGNE 296
           G GR+G LG G E
Sbjct: 320 GDGRHGKLGLGEE 332



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 154/324 (47%), Gaps = 29/324 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
            +  + +  + G   T ++++ G++Y FG +++G+  +G +    V  P  V++LK   V
Sbjct: 32  FKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNA--VNKPTCVKALKPEKV 89

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
             AA G   T + + +G VY     ++ +LG          H +    +   + Q+AAG 
Sbjct: 90  KLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAG- 148

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWH 270
            Y  A+  +   + ++  G    G++G G +     P  ++  +     PV  ++ G +H
Sbjct: 149 SYTSAVLTEDGQLVMW--GDNSEGQIGLGDKAYVSVPHQVDIGK-----PVSCISCGYYH 201

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSE 328
           +A++ QDG + T+G    G LG   ++ ++  +P++V  ++  K   VA G   T V++E
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE 260

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            GDVY+FG G+   LGH                P+ V  L +   ++  I+   +     
Sbjct: 261 -GDVYTFGLGQYGQLGHGTFV-------FETSEPKTVDHLGK--HKICHIACGEN----- 305

Query: 389 HTFALTESGKLYAFGAGDKGQLGI 412
           HT  +TE+G +Y FG G  G+LG+
Sbjct: 306 HTALITENGLMYTFGDGRHGKLGL 329



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 142/305 (46%), Gaps = 40/305 (13%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTAVLSR 166
           + ++G V+ FGK  F E                V S    KN   +  + G+  T+V++ 
Sbjct: 8   VPESGAVFTFGKCKFAEN---------------VPSKFWFKNDKPLHISCGDEHTSVVTE 52

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            G++Y F   N  +LG  ++ N V     +  L+   V   A G  +   L C   G  V
Sbjct: 53  NGKLYMFGSNNWGQLGFGSK-NAVNKPTCVKALKPEKVKLAACGRNH--TLICTEQG-NV 108

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y+ G    G+LG G  T+E+    +  F     +   +AAG++ +AV+ +DG++  WG  
Sbjct: 109 YAAGGNSEGQLGLGD-TEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDN 167

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G +G G++   SVP  V     V  I  + G Y + ++++DG++Y+FG  E+  LG  
Sbjct: 168 SEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQDGELYTFGEPENGKLG-- 223

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
            ++  Q   H     PQLV+    ++ +V +++         HT  L E G +Y FG G 
Sbjct: 224 -LSPKQLKNHK---LPQLVSG---ISGKVSKVAC-----GGGHTVVLAE-GDVYTFGLGQ 270

Query: 407 KGQLG 411
            GQLG
Sbjct: 271 YGQLG 275



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 11/229 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG   S  +T  G +  +G NS GQ+G G       P  +   + +  I  + G   
Sbjct: 144 QLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYH 201

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           + LI+  G++Y FG+   G+     +  K    PQLV  +    V + A G   T VL+ 
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGK-VSKVACGGGHTVVLA- 259

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           EG VYTF  G   +LGH T   +      +  L    +  IA G  +   +    +G+ +
Sbjct: 260 EGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALIT--ENGL-M 316

Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           Y+ G G  GKLG G    T++  P L   F  L      VA G  H  V
Sbjct: 317 YTFGDGRHGKLGLGEENYTNQFVPTLCSNF--LRFIVHSVACGGCHMLV 363



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           +F   N +P+ ++ G  H +VV ++G++  +G   +G LG G++   + P  V+AL   K
Sbjct: 29  KFWFKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEK 88

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
               A G   T + +E G+VY+ G      LG   + D +     ++++    T   ++ 
Sbjct: 89  VKLAACGRNHTLICTEQGNVYAAGGNSEGQLG---LGDTEERSTFHLIS--FFTKQHKIK 143

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           +      L    Y +A    LTE G+L  +G   +GQ+G+
Sbjct: 144 Q------LAAGSYTSA---VLTEDGQLVMWGDNSEGQIGL 174


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 182/370 (49%), Gaps = 38/370 (10%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           ++  K  ++ +G+   G+LG G  E+E    P  +   +   I Q A G   T++I+  G
Sbjct: 42  SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           ++Y+ G + +G+  +  QG K +   QL+  L      +AA G + T  ++  G++  FS
Sbjct: 102 KIYSCGNNDYGQLGHE-QGRKRL---QLILGLDAFVFKKAACGAYHTIAVNEWGQL--FS 155

Query: 175 WGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           WG+++  +LG +++ N +E  P ++ TL    +VQIA G  + LAL    +   +YS G 
Sbjct: 156 WGSNSEGQLGLNSK-NFMECSPRMVKTLGTSIIVQIACGMKHALALT---NNGELYSWGS 211

Query: 232 GLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LG G     E  P+LI    L  +    +A G +H+  + + G +  WG   +G 
Sbjct: 212 NSEGQLGLGVDIRCEMKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG  + +  ++P  +Q L + K  + A G+  +  ++ DG V++ G G    LGH     
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH----- 324

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQ 409
           G  N   N + P+ V  L  +   V QIS         HT AL  S G++YA+G G  GQ
Sbjct: 325 GSNN---NEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSQGRVYAWGLGGAGQ 374

Query: 410 LGIELVNNQT 419
           LG    NN T
Sbjct: 375 LG----NNST 380



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 157/325 (48%), Gaps = 21/325 (6%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  +++ +T  G +YS G+N  GQLGH    +  R + I  L      +AA G
Sbjct: 83  EIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRK--RLQLILGLDAFVFKKAACG 140

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 162
           A  T+ +++ GQ++++G +S  E + G+     +  SP++V++L    +VQ A G     
Sbjct: 141 AYHTIAVNEWGQLFSWGSNS--EGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHAL 198

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            L+  G +Y++   ++ +LG   +        L+ TL  +P+  IA G  +  ++A   S
Sbjct: 199 ALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYH--SIAISKS 256

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQDGRVC 281
           G A++  G    G+LG     D ++  L  Q Q L N +    A G   +  +  DG V 
Sbjct: 257 G-AIFGWGKNTFGQLG---LNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVF 312

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
           T G G YG LGHG+   E +P+ V  L       ++ G  +T  +V   G VY++G G +
Sbjct: 313 TCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 372

Query: 341 ASLGHNAIADGQGNRHANVLTPQLV 365
             LG+N+          +  TPQ+V
Sbjct: 373 GQLGNNST--------RSTTTPQVV 389



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 13/265 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 104
            +A  G  H+IAV   G ++S+GSNS GQLG  +    E  PR +++L    I+Q A G 
Sbjct: 135 KKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGM 194

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + +++ G++Y++G +S G+   GV   +    P+L+ +L  + +   A G + +  +
Sbjct: 195 KHALALTNNGELYSWGSNSEGQLGLGVD-IRCEMKPKLINTLAGVPIAFIACGGYHSIAI 253

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           S+ G +  F WG +   +LG +   N   P+ L  TL N  V   A G  + + L     
Sbjct: 254 SKSGAI--FGWGKNTFGQLGLNDTQNRNLPYQL-QTLRNAKVCYAACGEEFSVFLTVDG- 309

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
              V++ G G+ G+LGHGS  +E  PR +   +L+      ++ G  H  A+V   GRV 
Sbjct: 310 --GVFTCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVTQISCGKRHTLALVPSQGRVY 365

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ 306
            WG G  G LG+ +    + P+VV+
Sbjct: 366 AWGLGGAGQLGNNSTRSTTTPQVVR 390



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HSIA++  G ++ +G N+ GQLG   T+    P  +++L+  ++  AA G   ++ ++  
Sbjct: 249 HSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVD 308

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G    +++  P+ V  L    V Q + G   T A++  +GRVY 
Sbjct: 309 GGVFTCGAGMYGQLGHGSNNNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYA 366

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
           +  G   +LG+++  +   P  + G
Sbjct: 367 WGLGGAGQLGNNSTRSTTTPQVVRG 391


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 151/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G+VY++G++S G   +GV     V  P+L+++
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLIDA 359

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WGN        GH  E +   P  L G LE 
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGNGTFNFGLSGHGNEVSHWMPKRLNGPLEG 417

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 418 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRQSISVPREVE--SLKGLRT 472

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V +L 
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLV 532

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G      LG N  ADG        + P  V    
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG-NPQADG--------MVPARV---- 579

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG  +    PR + SL+G+R ++AA G   T  +
Sbjct: 426 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + T+LV  P  V SL      Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV--PTCVASLVEPNFCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
            FT  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 544 CFTVALTTSGHVYTMGSSVYGQLG-NPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P L+E  +   ++ VV      AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGVDQSMCS 668



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G VYS+G  S G+LGHG   +  +P+ I +L  + I   A G   T  ++ +
Sbjct: 322 HATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLS 381

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 382 GDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 441

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G    + ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 442 FGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 501

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  +   + P   + +L      Q+A G+C+ +AL    +   VY+
Sbjct: 502 KIFTWGDGDKGRLGHGDKETRLVP-TCVASLVEPNFCQVACGHCFTVALT---TSGHVYT 557

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 558 MGSSVYGQLGN-PQADGMVPARVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 615

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG+ +  + P +V+AL D +   V  G
Sbjct: 616 GRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G     +++++G VY  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVY--SWGEESGGRLGHGVDCDVPQPK-LID 358

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L ++ +  +A G  +  A+      +  +  G    G  GHG+      P+ +    L 
Sbjct: 359 ALAHMNIELVACGEYHTCAVTLS-GDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNG-PLE 416

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH AVV   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAA 476

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKETR-LVPTCV 528

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            SL + N    Q++  +       T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 ASLVEPN--FCQVACGHCF-----TVALTTSGHVYTMGSSVYGQLG----NPQADGMVPA 577

Query: 426 RVD 428
           RV+
Sbjct: 578 RVE 580


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 166/369 (44%), Gaps = 44/369 (11%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT  +   P+ + S   + +   + G    ML++  G+ +++G+++ G   +G +    V
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETD--V 348

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPH 193
           + P+L+++ K + V   A G + +  ++  G +YT  WG+ A+    LGH +E +   P 
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYT--WGDGAKSSGLLGHRSEASHWIPK 406

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
            + G +E + V  ++ G  +   +    S   +++ G G  G LGHG R+    PR +E 
Sbjct: 407 KVCGLMEGLRVSHVSCGPWHTALIT---SAGRLFTFGDGTFGALGHGDRSGCITPREVET 463

Query: 254 FQLLNLQPVVVAAGAWHAAVV-----GQDGR--------VCTWGWGRYGCLGHGNEECES 300
           F    L+ + VA G WH A V     G D R        + TWG G  G LGHG+ +   
Sbjct: 464 FN--GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL 521

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            P+ + AL D     VA     T  ++  G VY+ G      LG            AN +
Sbjct: 522 APQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL---------ANGM 572

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P  V     V+  V +IS  +      H   LT   ++Y +G G+ GQLG     N+  
Sbjct: 573 SPICVEDY-LVDSTVEEISCGSH-----HVAVLTSRTEVYTWGKGENGQLGHGDCENKC- 625

Query: 421 RGNPERVDI 429
              P  VDI
Sbjct: 626 --TPTLVDI 632



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 36/362 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT +G  +S+G  + G+LGHG   +   P+ I++ +G+ +   A G   +  +
Sbjct: 316 GNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAV 375

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESL-KNIFVVQAAIGNFFTAVLSR 166
           + +G +Y +G    G    G+ G +   S   P+ V  L + + V   + G + TA+++ 
Sbjct: 376 TSSGDLYTWGD---GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITS 432

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 224
            GR++TF  G    LGH      + P   + T   +  +++A G  +  A+    SG+  
Sbjct: 433 AGRLFTFGDGTFGALGHGDRSGCITPRE-VETFNGLKTLKVACGVWHTAAVVELMSGLDS 491

Query: 225 --------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVV 274
                    +++ G G  GKLGHG    +  PRL  Q    L++     VA        +
Sbjct: 492 RPSDAPSGTLFTWGDGDKGKLGHG----DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              GRV T G   YG LG       S   V   L D     ++ G +   V++   +VY+
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFA 392
           +G GE+  LGH            N  TP LV  L  KQV   V   + + +I    H +A
Sbjct: 608 WGKGENGQLGHGDC--------ENKCTPTLVDILRDKQVKRIVCGSNFSAAIC--VHNWA 657

Query: 393 LT 394
           L+
Sbjct: 658 LS 659



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  +TS G +++FG  + G LGHG       PR + +  G++ ++ A G  
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVW 477

Query: 106 RTMLI-----------SDA--GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
            T  +           SDA  G ++ +G    G+  +G    +L  +PQ + +L +    
Sbjct: 478 HTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL--APQCITALVDKSFS 535

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           + A     T  L+  GRVYT       +LG     N + P  +   L +  V +I+ G  
Sbjct: 536 EVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL-ANGMSPICVEDYLVDSTVEEISCGSH 594

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAG 267
           ++  L    S   VY+ G G  G+LGHG   ++  P L++  +   ++ +V      AA 
Sbjct: 595 HVAVLT---SRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651

Query: 268 AWHAAVVGQDGRVCTWGWGRYGC 290
             H   +  D  +C      +GC
Sbjct: 652 CVHNWALSADNSIC------FGC 668


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 41/357 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR ++S Q + +   A G     +++  GQV+++G+++ G    G + +  V+ P++++S
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGR--LGHKTSDSVSDPKIIDS 280

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 201
           L +  V   A G  +T  +S  G +Y   WG     LG   +  + +   PH L+ T + 
Sbjct: 281 LASTPVKTIAFGAKYTCAVSVSGELY--EWGEGIHSLGFGKNQCQRSPWFPHKLISTSDG 338

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V++IA G  +   ++   S   +Y+ G G  G LGHG      HP+ +E   L   + 
Sbjct: 339 ISVLKIACGQWHTAIIS---SLGKLYTYGYGTFGVLGHGDTHSVVHPKEVES--LRGSRA 393

Query: 262 VVVAAGAWHAAVVGQD----------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
             VA G WH A + +           G++ TWG    G LGH N++ + VP  V++L D 
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC 453

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               V+ G   T V++  G V++ G  E   LG++        R  N     +   LK  
Sbjct: 454 DFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNS--------RSDNTSICMVEGPLK-- 503

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            E V  IS  +S     H   LT +GK++ +G G +GQLG+    +  +R +P  V+
Sbjct: 504 TEFVKDISCGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GDYVDRSSPTLVE 552



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 169/356 (47%), Gaps = 48/356 (13%)

Query: 87  RPIRSLQGI---RIIQAAA---GAGRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTS 139
           R IRS + I   RIIQ        G          ++ +G D  G  +++G      ++ 
Sbjct: 164 RDIRSAETIKDQRIIQMPKLKQSEGSNAATDSLKDIFVWG-DVLGRMSDHGHVPATNISL 222

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLG 197
           P+L++S + + V   A G    A+++++G+V  FSWG  N  RLGH T  +  +P  ++ 
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQV--FSWGEENGGRLGHKTSDSVSDPK-IID 279

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQ 253
           +L + PV  IA G  Y  A++   SG  +Y  G G+   LG G    ++ P    +LI  
Sbjct: 280 SLASTPVKTIAFGAKYTCAVSV--SG-ELYEWGEGIHS-LGFGKNQCQRSPWFPHKLIST 335

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
              +++  + +A G WH A++   G++ T+G+G +G LGHG+      PK V++L   +A
Sbjct: 336 SDGISV--LKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRA 393

Query: 314 IHVATGDYTTFVVSED----------GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
             VA G + T  + E           G ++++G      LGH        N+ +  L P 
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHT-------NKKSK-LVPT 445

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
            V SL  ++    Q+S   S+     T  LT +G ++  G+ + GQLG    +N +
Sbjct: 446 RVESL--IDCDFTQVSCGMSL-----TAVLTITGVVFTIGSKEHGQLGNSRSDNTS 494



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 157/342 (45%), Gaps = 28/342 (8%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           N Q+IA G  H+  VT +G V+S+G  + G+LGH T++    P+ I SL    +   A G
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFG 292

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP----QLVESLKNIFVVQAAIGNF 159
           A  T  +S +G++Y +G+   G    G    +   SP    +L+ +   I V++ A G +
Sbjct: 293 AKYTCAVSVSGELYEWGE---GIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQW 349

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA--- 216
            TA++S  G++YT+ +G    LGH    + V P   + +L       +A G  +  A   
Sbjct: 350 HTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKE-VESLRGSRAKSVACGPWHTAAIVE 408

Query: 217 ----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
               L     G  +++ G   GGKLGH ++  +  P  +E   L++     V+ G    A
Sbjct: 409 TSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVE--SLIDCDFTQVSCGMSLTA 466

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
           V+   G V T G   +G LG+   +  S+  V   L       ++ G     V++ +G V
Sbjct: 467 VLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKV 526

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 372
           +++G G    LG     D          +P LV +L  KQV+
Sbjct: 527 FTWGKGTEGQLGLGDYVDRS--------SPTLVEALEDKQVD 560


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 24/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G+ +   G LGHG     W P+ +   L+GI +   + G   T
Sbjct: 392 GEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 451

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  +FG   +G +  K V+ P+ VESLK +  ++A+ G + TA +   
Sbjct: 452 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEV 509

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P  +     N    Q+A G+   +
Sbjct: 510 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNF--CQVACGHSLTV 567

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    SG  VY++G  + G+LG+  + D K P  +E  +LL      +A GA+H AV+ 
Sbjct: 568 ALTT--SGH-VYAMGSPVYGQLGN-PQADGKLPTRVEG-KLLKSFVEEIACGAYHVAVLT 622

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P +V AL D     +A G   T  +
Sbjct: 623 LRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 163/370 (44%), Gaps = 46/370 (12%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G G   +   P+ + S   + +   A G     L++  G+++++G++S G   +GV    
Sbjct: 313 GLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD- 371

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 191
            V  P+L+++L N  +   A G + T  ++  G +YT  WGN A     LGH  + +   
Sbjct: 372 -VLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYT--WGNGAYNYGLLGHGNQVSHWV 428

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           P  + G LE I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +
Sbjct: 429 PKRVNGPLEGIHVSYISCGPWH---TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREV 485

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 299
           E  +   L+ +  + G WH A V +             G++ TWG G  G LGHG++E +
Sbjct: 486 ESLK--GLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  V AL +     VA G   T  ++  G VY+ G      LG N  ADG+       
Sbjct: 544 LVPTCV-ALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLG-NPQADGK------- 594

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
             P  V       E  +  S    I   A H   LT   ++Y +G G  G+LG     + 
Sbjct: 595 -LPTRV-------EGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGH---GDT 643

Query: 419 TERGNPERVD 428
            +R NP  VD
Sbjct: 644 DDRNNPTLVD 653



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 24/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR + SL+G+R ++A+ G   T  +
Sbjct: 447 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAV 506

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G +  KLV  P  V  +++ F  Q A G+
Sbjct: 507 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVALVEHNF-CQVACGH 563

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VY        +LG + + +   P  + G L    V +IA G  ++  L 
Sbjct: 564 SLTVALTTSGHVYAMGSPVYGQLG-NPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLT 622

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
            +     VY+ G G  G+LGHG   D  +P L++  +  +++ +       AA   H  V
Sbjct: 623 LRNE---VYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAICLHKWV 679

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 680 SGVDQSMCS 688



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 20/185 (10%)

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           + VG GLG K+      D   P+ +E   +L++Q +  A G  HAA+V + G + +WG  
Sbjct: 308 HRVGSGLGVKI------DSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEE 359

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LGHG +     PK++ AL++     VA G+Y T  V+  GD+Y++G G      +N
Sbjct: 360 SGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNG-----AYN 414

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
               G GN+ ++ +  ++   L+      + +S  +   W  HT  +T +G+L+ FG G 
Sbjct: 415 YGLLGHGNQVSHWVPKRVNGPLEG-----IHVSYISCGPW--HTAVVTSAGQLFTFGDGT 467

Query: 407 KGQLG 411
            G LG
Sbjct: 468 FGALG 472



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS   GQLG+   + +   R    L    + + A GA  
Sbjct: 558 QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYH 617

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +++   +VY +GK + G   +G   T    +P LV++LK+  V   A G  FTA +
Sbjct: 618 VAVLTLRNEVYTWGKGANGRLGHG--DTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  +    +P  + +L    I+  + G   T+ +
Sbjct: 42  GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+++G   +G+        + +  P+ ++SL ++ +VQ A G+  +  LS++  +
Sbjct: 100 NDKGQVFSWGHAVYGQIGLST-AEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDI 158

Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             FSWG +   +LG   E         + +L  IP   IAAG  +  AL    SG A++ 
Sbjct: 159 --FSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFG 213

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG    TD   P L++    L  Q ++ +  G  H A + ++G V T+G G 
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKS---LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T   V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 32/351 (9%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR         +     G+  T+ + D G VY  G +  
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+V  FSWG+    ++G
Sbjct: 64  GQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIG 117

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             T    +     + +L ++ +VQ+A G+ + LAL+       ++S G    G+LG G  
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLE 174

Query: 243 TD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
              E  PR I+   L  +    +AAG  H+  +   G +  WG  ++G LG  +E   +V
Sbjct: 175 IKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P ++++L   K IH+  G+  T  ++++G V++FG G    LGHN+      N   N   
Sbjct: 233 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN--- 284

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
           P+ V  L  +   V QI+         HT A    SG++Y+FG G  GQLG
Sbjct: 285 PRKVFEL--MGSIVTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    ++S+G N  GQLG G   ++E  PR I+SL GI     AAG G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G ++ +G++ FG  + G+        P L++SL++  ++    G   TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  ++V P  +   + +I V QIA G  + LA    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS  + K P
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSP 338



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG V+S+G    GQ+G  T EE  R PR I+SL  ++I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S    ++++G++ +G+   G++  K   +P+ ++SL  I     A G   +  L+  G 
Sbjct: 152 LSKDSDIFSWGQNQYGQLGLGLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG  T+  D     LL +L +  ++ I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLG-LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S   E +PR +  F+L+      +A G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTINRKSPFTVK 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 6/170 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS A+T  G ++ +G N  GQLG     +   P  ++SL+  +II    G   T  
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
           ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A +   G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 314

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG---TLENIPVVQIAAGYCYLL 215
           R+Y+F  G + +LG  +  N   P  + G   T E+       A  CY L
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEANGCYCL 364


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 187/372 (50%), Gaps = 43/372 (11%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS+A+   G V+++G+N  GQLG+GT +  + P  ++ L+   ++  AAG+  
Sbjct: 401 AIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQVKGLK--DVVAIAAGSDH 458

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++     G V+A+G + FG+   G  G  +    P  V+ LK+  VV  A G+  +  L 
Sbjct: 459 SLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKD--VVAVAAGSVHSLALK 516

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGM 224
           ++G ++  +WG++    H    ND+E   +   ++ +  VV IAAG  + L L    +  
Sbjct: 517 KDGTIW--AWGSNY---HGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVW 571

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           A   V   L            ++ RL+      Q+  L+ VV +AAG  H+  + +DG V
Sbjct: 572 AWGEVWFDL----------LNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTV 621

Query: 281 CTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
             WG   +G LG+   E  S VP  V+ L D+ AI  ATG++ +  + +DG V+++G   
Sbjct: 622 WAWGDNFFGQLGNSPREKYSLVPVQVKGLKDILAI--ATGEWHSLAIKKDGTVWAWGENS 679

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
           +  LG+        ++++ V  P  V  +K V      ++++   Y   H+ AL + G +
Sbjct: 680 TGQLGNETSGK---DKYSYV--PVQVKGIKDV------LAISAGSY---HSLALKKDGTV 725

Query: 400 YAFGAGDKGQLG 411
           + +GA  +GQLG
Sbjct: 726 WGWGANARGQLG 737



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 178/360 (49%), Gaps = 45/360 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+++G+N  GQLG+G +E+ + P  +++L+   ++  AAG   ++ 
Sbjct: 254 AGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLK--DVVAIAAGENHSLA 311

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G ++A+G + +G+   G   ++ +  P   +SLK+  VV  A G   +  L ++G 
Sbjct: 312 LKKDGTIWAWGDNEWGQ--LGNSISEKLCVPVQFKSLKD--VVAIAAGCEHSLALKKDGT 367

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  SWGN+   +LG+    +   P  + G  +   VV IA G  + LAL    +   V+
Sbjct: 368 VW--SWGNNYYGQLGNGNSIDSYVPVQVRGLKD---VVAIATGNAHSLALKKDGT---VW 419

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG+G+      P      Q+  L+ VV +AAG+ H+    +DG V  WG  
Sbjct: 420 AWGNNEFGQLGNGTNKSSFVP-----VQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNN 474

Query: 287 RYGCLGHGN---EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            +G LG+G+    +  +VP  V+ L DV A  VA G   +  + +DG ++++G      L
Sbjct: 475 EFGQLGNGSGGYGQYYAVPVQVKGLKDVVA--VAAGSVHSLALKKDGTIWAWGSNYHGLL 532

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
                    GN       P  V  LK     VV I+  ++     H+  L + G ++A+G
Sbjct: 533 ---------GNDIERSFVPVQVKGLKD----VVAIAAGSN-----HSLVLKKDGTVWAWG 574



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 40/366 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 108
           AG  HS+ +   G V+++GSN  GQLG+     E+   P++ ++G++ ++  AAG G ++
Sbjct: 101 AGRYHSLTLKKDGTVWAWGSNKDGQLGN-RDAGEYSIVPVQ-VKGLKDVVAIAAGDGYSL 158

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +   G V+ +G     E+   + G+ K  + P  ++ LK+  VV  A G  ++  L ++
Sbjct: 159 GLKKDGTVWCWG---LNESIQVIDGSNKDFSVPFQIKGLKD--VVAIAAGKDYSLALKKD 213

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 226
           G V+ + +  +         ++  P P+   +E +  VV IAAG  + LAL    +   V
Sbjct: 214 GTVWMWEYKYNYYEQLRRGADEYSPVPV--QVEGLKDVVAIAAGRYHSLALKKDGT---V 268

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
           ++ G    G+LG+G   D   P      Q+ NL+ VV +AAG  H+  + +DG +  WG 
Sbjct: 269 WAWGNNYYGQLGNGKSEDSYDP-----VQVKNLKDVVAIAAGENHSLALKKDGTIWAWGD 323

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             +G LG+   E   VP   ++L DV AI  A G   +  + +DG V+S+G      LG+
Sbjct: 324 NEWGQLGNSISEKLCVPVQFKSLKDVVAI--AAGCEHSLALKKDGTVWSWGNNYYGQLGN 381

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               D           P  V  LK     VV I+       NAH+ AL + G ++A+G  
Sbjct: 382 GNSIDS--------YVPVQVRGLKD----VVAIATG-----NAHSLALKKDGTVWAWGNN 424

Query: 406 DKGQLG 411
           + GQLG
Sbjct: 425 EFGQLG 430



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 55/376 (14%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+S+G+N  GQLG+G + + + P  +R L+   ++  A G   ++ 
Sbjct: 354 AGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK--DVVAIATGNAHSLA 411

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + FG+   G   +  V  P  V+ LK+  VV  A G+  +    ++G 
Sbjct: 412 LKKDGTVWAWGNNEFGQLGNGTNKSSFV--PVQVKGLKD--VVAIAAGSDHSLAFKKDGT 467

Query: 170 VYTFSWGND--ARLG--------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           V+  +WGN+   +LG        ++  P  V+            VV +AAG  + LAL  
Sbjct: 468 VW--AWGNNEFGQLGNGSGGYGQYYAVPVQVKGLK--------DVVAVAAGSVHSLALKK 517

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
             +   +++ G    G LG+         R     Q+  L+ VV +AAG+ H+ V+ +DG
Sbjct: 518 DGT---IWAWGSNYHGLLGNDIE------RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDG 568

Query: 279 RVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            V  WG   +  L   +     SVP  ++ L DV AI  A G++ +  + +DG V+++G 
Sbjct: 569 TVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAI--AAGEHHSLGLKKDGTVWAWGD 626

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
                LG++        R    L P  V  LK +      +++    +   H+ A+ + G
Sbjct: 627 NFFGQLGNSP-------REKYSLVPVQVKGLKDI------LAIATGEW---HSLAIKKDG 670

Query: 398 KLYAFGAGDKGQLGIE 413
            ++A+G    GQLG E
Sbjct: 671 TVWAWGENSTGQLGNE 686



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 45/368 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG G+S+ +   G V+ +G N S Q+  G+ ++   P  I+ L+   ++  AAG   ++ 
Sbjct: 152 AGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLK--DVVAIAAGKDYSLA 209

Query: 110 ISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           +   G V+   +  + + +   G      V  P  VE LK+  VV  A G + +  L ++
Sbjct: 210 LKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQVEGLKD--VVAIAAGRYHSLALKKD 265

Query: 168 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGM 224
           G V+  +WGN+   +LG+    +  +P      ++N+  VV IAAG  + LAL    +  
Sbjct: 266 GTVW--AWGNNYYGQLGNGKSEDSYDPV----QVKNLKDVVAIAAGENHSLALKKDGT-- 317

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
            +++ G    G+LG     +    +L    Q  +L+ VV +AAG  H+  + +DG V +W
Sbjct: 318 -IWAWGDNEWGQLG-----NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSW 371

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LG+GN     VP  V+ L DV AI  ATG+  +  + +DG V+++G  E   L
Sbjct: 372 GNNYYGQLGNGNSIDSYVPVQVRGLKDVVAI--ATGNAHSLALKKDGTVWAWGNNEFGQL 429

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G+          + +   P  V  LK     VV I+  +      H+ A  + G ++A+G
Sbjct: 430 GNGT--------NKSSFVPVQVKGLKD----VVAIAAGSD-----HSLAFKKDGTVWAWG 472

Query: 404 AGDKGQLG 411
             + GQLG
Sbjct: 473 NNEFGQLG 480



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 41/311 (13%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIR-IIQAAAGAGRT 107
           AG  HS+A    G V+++G+N  GQLG+G+    ++   P++ ++G++ ++  AAG+  +
Sbjct: 454 AGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQ-VKGLKDVVAVAAGSVHS 512

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLS 165
           + +   G ++A+G +      +G+ G  +  S  P  V+ LK+  VV  A G+  + VL 
Sbjct: 513 LALKKDGTIWAWGSN-----YHGLLGNDIERSFVPVQVKGLKD--VVAIAAGSNHSLVLK 565

Query: 166 REGRVYTFSWG--------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           ++G V+  +WG         ++RL + + P  ++            VV IAAG  + L L
Sbjct: 566 KDGTVW--AWGEVWFDLLNENSRLVYSSVPVQIKGLK--------DVVAIAAGEHHSLGL 615

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               +   V++ G    G+LG+  R  EK+  +  Q + L    + +A G WH+  + +D
Sbjct: 616 KKDGT---VWAWGDNFFGQLGNSPR--EKYSLVPVQVKGLK-DILAIATGEWHSLAIKKD 669

Query: 278 GRVCTWGWGRYGCLGH---GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           G V  WG    G LG+   G ++   VP  V+ + DV AI  + G Y +  + +DG V+ 
Sbjct: 670 GTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLAI--SAGSYHSLALKKDGTVWG 727

Query: 335 FGCGESASLGH 345
           +G      LG+
Sbjct: 728 WGANARGQLGN 738



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 149/320 (46%), Gaps = 40/320 (12%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            IIQ AAG   ++ +   G V+A+G + +G+   G + + ++  P  V+ LK+  VV  A
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQC--GTEESSII--PVKVKGLKD--VVAIA 100

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYL 214
            G + +  L ++G V+ +    D +LG+       + P  + G  +   VV IAAG  Y 
Sbjct: 101 AGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKD---VVAIAAGDGYS 157

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
           L L    +   V+  G     ++  GS  D   P     FQ+  L+ VV +AAG  ++  
Sbjct: 158 LGLKKDGT---VWCWGLNESIQVIDGSNKDFSVP-----FQIKGLKDVVAIAAGKDYSLA 209

Query: 274 VGQDGRVCTW--GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
           + +DG V  W   +  Y  L  G +E   VP  V+ L DV AI  A G Y +  + +DG 
Sbjct: 210 LKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAI--AAGRYHSLALKKDGT 267

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           V+++G      LG+    D           P  V +LK     VV I+   +     H+ 
Sbjct: 268 VWAWGNNYYGQLGNGKSEDS--------YDPVQVKNLKD----VVAIAAGEN-----HSL 310

Query: 392 ALTESGKLYAFGAGDKGQLG 411
           AL + G ++A+G  + GQLG
Sbjct: 311 ALKKDGTIWAWGDNEWGQLG 330



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 130/250 (52%), Gaps = 22/250 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G ++++GSN  G LG+   E  + P  ++ L+   ++  AAG+  +++
Sbjct: 507 AGSVHSLALKKDGTIWAWGSNYHGLLGN-DIERSFVPVQVKGLK--DVVAIAAGSNHSLV 563

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           +   G V+A+G+  F       + ++LV S  P  ++ LK+  VV  A G   +  L ++
Sbjct: 564 LKKDGTVWAWGEVWFDLLN---ENSRLVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKD 618

Query: 168 GRVYTFSWGND--ARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           G V+  +WG++   +LG+   E   + P  + G  +   ++ IA G  + LA+    +  
Sbjct: 619 GTVW--AWGDNFFGQLGNSPREKYSLVPVQVKGLKD---ILAIATGEWHSLAIKKDGT-- 671

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V++ G    G+LG+ +   +K+  +  Q + +    + ++AG++H+  + +DG V  WG
Sbjct: 672 -VWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK-DVLAISAGSYHSLALKKDGTVWGWG 729

Query: 285 WGRYGCLGHG 294
               G LG+G
Sbjct: 730 ANARGQLGNG 739



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 60/99 (60%), Gaps = 4/99 (4%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIR-IIQAAAGA 104
           AIA G  HS+A+   G V+++G NS+GQLG+ T+ ++++   P++ ++GI+ ++  +AG+
Sbjct: 655 AIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQ-VKGIKDVLAISAGS 713

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
             ++ +   G V+ +G ++ G+   G  G       Q++
Sbjct: 714 YHSLALKKDGTVWGWGANARGQLGNGGAGVYSTVPVQVI 752


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 177/366 (48%), Gaps = 36/366 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           + A +G  H++ + + G ++++G N+ GQLG+GT +    P P+ +L GI  +  ++G  
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV-NLTGITSV--SSGHR 458

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T  +   G V+++G + +G+   G +  +  ++P  V  L  +  +  A G++ +  L 
Sbjct: 459 HTAALRLDGTVWSWGTNQYGQLGDGTRTDR--STPVQVPGLTGVTSI--ATGDYHSLALR 514

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G V+ + +    +LG  T  +  +P  + G L NI  V IAAG  + LAL    +   
Sbjct: 515 SNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSG-LTNI--VSIAAGGGHSLALRSDGT--- 568

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G    G+LG+G+RT    P  ++   L N+  V +AAG  ++  +  DG V  WG+
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTILP--VQAVGLGNV--VSLAAGKMYSLALRADGTVWAWGY 624

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
              G LG G  +  +VP  V  L+ + +I    G Y +  +  DG V+++G      LG 
Sbjct: 625 NASGQLGVGTTQGSAVPLQVSGLSAITSI--TAGTYHSLALRSDGWVWAWGFNFEGQLG- 681

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
           N  +D       N LTP LV S+                  + H+ A+   G L+A+G  
Sbjct: 682 NGTSD-------NRLTPGLVVSMSNATAIFAG---------DLHSLAVRADGTLWAWGLN 725

Query: 406 DKGQLG 411
             GQLG
Sbjct: 726 SHGQLG 731



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 165/371 (44%), Gaps = 40/371 (10%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E    +AG  HS+AV + G V+++G N   QLG G       P       G+ ++   AG
Sbjct: 300 ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLV---AG 356

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ +   G  +++G + FG+   G    +   +P  V  L  +    A  G   T +
Sbjct: 357 FRHSVALGADGTAWSWGDNVFGQ--LGDTTFQPRMAPVQVTGLA-LGRADATSGQLHTVM 413

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPS 222
           L   GR++ +   N  +LG+ T+ N   P P+     N+  +  +++G+ +  AL    +
Sbjct: 414 LGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV-----NLTGITSVSSGHRHTAALRLDGT 468

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
              V+S G    G+LG G+RTD   P      Q+  L  V  +A G +H+  +  +G V 
Sbjct: 469 ---VWSWGTNQYGQLGDGTRTDRSTP-----VQVPGLTGVTSIATGDYHSLALRSNGTVW 520

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG+ RYG LG G     + P  V  L ++  + +A G   +  +  DG V++FG     
Sbjct: 521 GWGFNRYGQLGDGTTVDRTQPVQVSGLTNI--VSIAAGGGHSLALRSDGTVWAFGYNFDG 578

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LG+       G R   +L  Q V  L  V      +SL        ++ AL   G ++A
Sbjct: 579 QLGN-------GTRTWTILPVQAV-GLGNV------VSLAAG---KMYSLALRADGTVWA 621

Query: 402 FGAGDKGQLGI 412
           +G    GQLG+
Sbjct: 622 WGYNASGQLGV 632



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 180/378 (47%), Gaps = 43/378 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR-- 106
           +AG  HS+A+ + G  +S+G N  GQLG  T +   R  P++ + G+ + +A A +G+  
Sbjct: 354 VAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQP--RMAPVQ-VTGLALGRADATSGQLH 410

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+++   G+++A+G ++ G+      GT+  +S  L  +L  I  V +  G+  TA L  
Sbjct: 411 TVMLGANGRLWAWGDNNQGQLG---NGTQQNSSLPLPVNLTGITSVSS--GHRHTAALRL 465

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G V+  SWG +   +LG  T  +   P  + G      V  IA G  + LAL    +  
Sbjct: 466 DGTVW--SWGTNQYGQLGDGTRTDRSTPVQVPGL---TGVTSIATGDYHSLALRSNGT-- 518

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+  G    G+LG G+  D   P  ++   L N+  V +AAG  H+  +  DG V  +G
Sbjct: 519 -VWGWGFNRYGQLGDGTTVDRTQP--VQVSGLTNI--VSIAAGGGHSLALRSDGTVWAFG 573

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           +   G LG+G      +P  VQA+     + +A G   +  +  DG V+++G   S  LG
Sbjct: 574 YNFDGQLGNGTRTWTILP--VQAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLG 631

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
              +   QG+       P  V+ L  +       S+T   Y   H+ AL   G ++A+G 
Sbjct: 632 ---VGTTQGSA-----VPLQVSGLSAIT------SITAGTY---HSLALRSDGWVWAWGF 674

Query: 405 GDKGQLGIELVNNQTERG 422
             +GQLG    +N+   G
Sbjct: 675 NFEGQLGNGTSDNRLTPG 692



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 175/394 (44%), Gaps = 58/394 (14%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV S+G V+++G N  GQLG GTT++  +  P++       +  AAG   ++ + + 
Sbjct: 61  HSLAVHSEGTVFAWGFNRLGQLGDGTTQD--KAAPVQVAGVASAVSVAAGDQYSLALDEN 118

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G ++ G+   G    +    P+ V  L     V  A G      L  +G V+  
Sbjct: 119 GDVWAWGDNASGQLGDGTLTPR--AQPRRVSGLTQ--GVSLASGFAHAVALRADGTVW-- 172

Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           +WG++   +LG  T      P P+ G  +   +V + AG    LAL    +   V++ G 
Sbjct: 173 AWGDNRSNQLGSATLTRSPVPIPVPGLSD---IVAVVAGGSSSLALRADGT---VWAWGD 226

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LG G+      P      ++ NL  V  ++AGA+HA  +  DG    WG+  +G 
Sbjct: 227 NRYGQLGDGTTVRRAAP-----VRVANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQ 281

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG------ 344
           LG G     ++P V+  L + +   V  G+Y +  V  DG V+++G      LG      
Sbjct: 282 LGDGTTVQRTLP-VLIGLTETRT--VVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338

Query: 345 -----HNAIADG----QGNRHANVLTP-------------QLVTSLKQVNERVVQIS--- 379
                H  +  G     G RH+  L               QL  +  Q     VQ++   
Sbjct: 339 SAVPLHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLA 398

Query: 380 --LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               ++     HT  L  +G+L+A+G  ++GQLG
Sbjct: 399 LGRADATSGQLHTVMLGANGRLWAWGDNNQGQLG 432



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 165/416 (39%), Gaps = 93/416 (22%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG   S+A+ + G V+++G N  GQLG GTT    R  P+R      +   +AGA   +
Sbjct: 206 VAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVR--RAAPVRVANLDAVTHISAGAYHAL 263

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G  +A+G ++FG+   G   T   T P L+   +   VV    GN+ +  +  +G
Sbjct: 264 ALRADGTAWAWGYNAFGQLGDGT--TVQRTLPVLIGLTETRTVVA---GNYHSLAVRTDG 318

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC--------- 219
            V+  +WG++      T        PL   +     V + AG+ + +AL           
Sbjct: 319 AVW--AWGDNRYRQLGTGNLTSSAVPLHAGMTG--GVTLVAGFRHSVALGADGTAWSWGD 374

Query: 220 -----------QPSGMAVYSVGCGLG----------------------------GKLGHG 240
                      QP    V   G  LG                            G+LG+G
Sbjct: 375 NVFGQLGDTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNG 434

Query: 241 SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           ++ +   P  +      NL  +  V++G  H A +  DG V +WG  +YG LG G     
Sbjct: 435 TQQNSSLPLPV------NLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDR 488

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           S P  V  L  V +I  ATGDY +  +  +G V+ +G      LG     D         
Sbjct: 489 STPVQVPGLTGVTSI--ATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVD--------- 537

Query: 360 LTPQLVTSLKQVNERVVQIS-LTNSIYWNA---HTFALTESGKLYAFGAGDKGQLG 411
                         + VQ+S LTN +   A   H+ AL   G ++AFG    GQLG
Sbjct: 538 ------------RTQPVQVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLG 581



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 16/255 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A+ S G V+ +G N  GQLG GTT +  R +P++      I+  AAG G ++ +   
Sbjct: 509 HSLALRSNGTVWGWGFNRYGQLGDGTTVD--RTQPVQVSGLTNIVSIAAGGGHSLALRSD 566

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG +  G+   G +   ++  P     L N  VV  A G  ++  L  +G V+ +
Sbjct: 567 GTVWAFGYNFDGQLGNGTRTWTIL--PVQAVGLGN--VVSLAAGKMYSLALRADGTVWAW 622

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            +    +LG  T      P  + G      +  I AG  + LAL    S   V++ G   
Sbjct: 623 GYNASGQLGVGTTQGSAVPLQVSGLSA---ITSITAGTYHSLALR---SDGWVWAWGFNF 676

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG+G+  +   P L+            + AG  H+  V  DG +  WG   +G LG 
Sbjct: 677 EGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGT 732

Query: 294 GNEECESVPKVVQAL 308
           G+      P  VQ L
Sbjct: 733 GDTVEAWFPVQVQGL 747



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 108/260 (41%), Gaps = 29/260 (11%)

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           V+ A+G + +  +  EG V+ + +    +LG  T  +   P  + G       V +AAG 
Sbjct: 53  VRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVAS---AVSVAAGD 109

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            Y LAL        V++ G    G+LG G+ T    PR +        Q V +A+G  HA
Sbjct: 110 QYSLALDENGD---VWAWGDNASGQLGDGTLTPRAQPRRVSGLT----QGVSLASGFAHA 162

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +  DG V  WG  R   LG        VP  V  L+D+ A  V  G  ++  +  DG 
Sbjct: 163 VALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVA--VVAGGSSSLALRADGT 220

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           V+++G      LG     DG   R A    P  V +L  V        ++   Y   H  
Sbjct: 221 VWAWGDNRYGQLG-----DGTTVRRA---APVRVANLDAVTH------ISAGAY---HAL 263

Query: 392 ALTESGKLYAFGAGDKGQLG 411
           AL   G  +A+G    GQLG
Sbjct: 264 ALRADGTAWAWGYNAFGQLG 283



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 12/203 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS+A+ S G V++FG N  GQLG+GT    W   P++++    ++  AAG   ++ 
Sbjct: 555 AGGGHSLALRSDGTVWAFGYNFDGQLGNGT--RTWTILPVQAVGLGNVVSLAAGKMYSLA 612

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G  + GV  T+    P  V  L  I  + A  G + +  L  +G 
Sbjct: 613 LRADGTVWAWGYNASG--QLGVGTTQGSAVPLQVSGLSAITSITA--GTYHSLALRSDGW 668

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + +  + +LG+ T  N + P  L+ ++ N     I AG  + LA+    +   +++ 
Sbjct: 669 VWAWGFNFEGQLGNGTSDNRLTPG-LVVSMSN--ATAIFAGDLHSLAVRADGT---LWAW 722

Query: 230 GCGLGGKLGHGSRTDEKHPRLIE 252
           G    G+LG G   +   P  ++
Sbjct: 723 GLNSHGQLGTGDTVEAWFPVQVQ 745



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           + Q     L PV +A G +H+  V  +G V  WG+ R G LG G  + ++ P  VQ    
Sbjct: 42  VRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAP--VQVAGV 99

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
             A+ VA GD  +  + E+GDV+++G   S  LG     DG     A    P+ V+ L Q
Sbjct: 100 ASAVSVAAGDQYSLALDENGDVWAWGDNASGQLG-----DGTLTPRAQ---PRRVSGLTQ 151

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  +SL +     AH  AL   G ++A+G     QLG
Sbjct: 152 ------GVSLASGF---AHAVALRADGTVWAWGDNRSNQLG 183



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 44  ENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL 92
            N+ AI AG  HS+AV + G ++++G NS GQLG G T E W P  ++ L
Sbjct: 698 SNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2736

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 2737 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2794

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q+A G  + LA++    G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 2851

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 2909

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 2970 GL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 3006



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 2775 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2834

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 2835 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 2892

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +A 
Sbjct: 2893 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 2944

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 2945 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 2999

Query: 270  HAA 272
            H+A
Sbjct: 3000 HSA 3002



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 2695 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2754

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 2755 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2812

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 2813 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 2859

Query: 405  GDKGQLGIELVNNQTERGNPERVDI 429
            GD G+LG+    N T + +P++VD+
Sbjct: 2860 GDYGKLGL---GNSTAKSSPQKVDV 2881



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2734

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 2735 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2792

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 2793 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 2848

Query: 276  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 2849 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 2908

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 2909 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 2953

Query: 395  ESGKLYAFGAGDKGQLGIELVNNQTE 420
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 2954 STGDVYAWGSNSEGQLGLGHTNHVRE 2979


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 17/304 (5%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  QA +G  HS+ + S G ++S G NS GQLG    + +  P+ IR+L  +R+   + G
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCG 83

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ +   G+V+A+G  S G+   G +  ++   P  +++L  I ++Q + G++ +  
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGVG-EFKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142

Query: 164 LSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           LS  G+V  FSWG+++  +LG   E P+   P   + +L+ IP+ Q+AAG  +  AL+  
Sbjct: 143 LSEGGQV--FSWGSNSHGQLGLGKECPSQASPQ-RVRSLDGIPLTQVAAGGAHSFALSL- 198

Query: 221 PSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
            SG A +  G    G+L    +        PR I    L NL  + ++ G  H AV+ Q 
Sbjct: 199 -SG-ASFGWGSNNAGQLALRQNNVPVQSHKPRSIG--ALKNLGVIYISCGYEHTAVLTQT 254

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 336
           G+V T+G   YG LGH     +  P++V+ ++ + +  +  G Y T   V   G V SFG
Sbjct: 255 GKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFG 313

Query: 337 CGES 340
            G S
Sbjct: 314 RGPS 317



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 93/203 (45%), Gaps = 17/203 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++S G    G+LG      ++HP+ I    L NL+  +V+ G  H+  V   GRV  WG 
Sbjct: 44  LHSCGDNSQGQLGRKGVQRDEHPKRIRT--LDNLRVDLVSCGKEHSLAVCYKGRVFAWGA 101

Query: 286 GRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G  G LG G  +E   +P  ++ L  +K I V+ G Y +  +SE G V+S+G      LG
Sbjct: 102 GSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLG 161

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                  Q        +PQ V SL         I LT      AH+FAL+ SG  + +G+
Sbjct: 162 LGKECPSQA-------SPQRVRSLDG-------IPLTQVAAGGAHSFALSLSGASFGWGS 207

Query: 405 GDKGQLGIELVNNQTERGNPERV 427
            + GQL +   N   +   P  +
Sbjct: 208 NNAGQLALRQNNVPVQSHKPRSI 230



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 40/271 (14%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           QAA G   + +L   G +++    +  +LG      D  P   + TL+N+ V  ++ G  
Sbjct: 27  QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPK-RIRTLDNLRVDLVSCGKE 85

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----------- 261
           + LA+  +     V++ G G  G+LG G            +F+ +NL P           
Sbjct: 86  HSLAVCYKGR---VFAWGAGSEGQLGVG------------EFKEINLIPTKIKTLTGIKI 130

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 320
           + V+ G +H+  + + G+V +WG   +G LG G E   ++ P+ V++L+ +    VA G 
Sbjct: 131 IQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             +F +S  G  + +G   +  L     A  Q N       P+ + +LK +   V+ IS 
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQL-----ALRQNNVPVQSHKPRSIGALKNLG--VIYISC 243

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   HT  LT++GK++ FG    GQLG
Sbjct: 244 GYE-----HTAVLTQTGKVFTFGGNSYGQLG 269


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 43/386 (11%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           TS   ++ +G      L HG   +     PR + +   I +   A G     +++  G+V
Sbjct: 167 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 226

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           +++G D+ G   + V  +  V+ P+++ESL +  V   A G   T  +S  G +Y   WG
Sbjct: 227 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 282

Query: 177 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                    G   + +   PH L G L+ I +++IA G+ +   ++   S   +++ G G
Sbjct: 283 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQLFAYGDG 339

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCT 282
             G LGHG       P+ +E   L  ++   +A G WH A +             G++ T
Sbjct: 340 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 397

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LGH +++ + VP  V+ LND     V+     T V++  G V++ G  E   
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+    D          T   +       E V +IS  +S     H   LT +GK++ +
Sbjct: 458 LGNPLSED----------TSICLIEGPLKTEFVREISSGSS-----HIAVLTMNGKVFTW 502

Query: 403 GAGDKGQLGIELVNNQTERGNPERVD 428
           G G +GQLG+    +  +R  P  V+
Sbjct: 503 GKGTEGQLGL---GDYVDRSYPTLVE 525



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 34/300 (11%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
           +AIA G  H+ AV+  G +Y +G  +   G  G      +W P  +   L GI I++ A 
Sbjct: 260 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 319

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T +IS AGQ++A+G  +FG   +G   T  V  P+ VESLK +     A G + TA
Sbjct: 320 GHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 377

Query: 163 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 207
            ++ R G V +       F+WG+  R  LGH  +     P  VEP      L +    Q+
Sbjct: 378 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 431

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
           +      + L    +G+ V+++G    G+LG+   +++    LIE    L  + V  +++
Sbjct: 432 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 485

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   +A G   T  +
Sbjct: 486 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q       +I +T  GVV++ GS   G+LG+  +E+         L+   + + ++G+ 
Sbjct: 429 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 488

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              +++  G+V+ +GK +  E + G+      + P LVE+L++  V   A G  FT  +
Sbjct: 489 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 146/287 (50%), Gaps = 23/287 (8%)

Query: 55  SIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLIS 111
           S AVT  G +Y +G N+   G LG G+   +W PR +   L+GI +   + G   T +++
Sbjct: 335 SCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVT 394

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
            AGQ++ FG  +FG   +G + +  V++P+ VESLK +  ++ A G + TA +       
Sbjct: 395 SAGQLFTFGDGTFGVLGHGDRSS--VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGS 452

Query: 165 -----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
                   G+++T+  G+  RLGH  +   + P   + TL      Q+A G+   +AL  
Sbjct: 453 SSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVP-TYVATLVEPSFCQVACGHSLTVALTT 511

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             SG  VY++G  + G+LG+  + D K P  +E   + N    + A GA+H AV+     
Sbjct: 512 --SGQ-VYTMGSPVYGQLGN-PQADGKVPTRVEGKLMKNFVEEL-ACGAYHVAVLTSRTE 566

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           V TWG G  G LGHG+ +  + P +V+AL D +   +  G   T  +
Sbjct: 567 VYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAI 613



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 150/346 (43%), Gaps = 48/346 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+V+++G++  G   +GV     V+ P+ V+ 
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDG 319

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           LKN  V   A G + +  ++  G +Y   WG +A     LG  +E     P  L G LE 
Sbjct: 320 LKNFNVELVACGEYLSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWVPRKLSGPLEG 377

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  ++ G  +   +    S   +++ G G  G LGHG R+    PR +E   L  L+ 
Sbjct: 378 IHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRSSVSTPREVE--SLKGLRT 432

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           + VA G WH A V +             G++ TWG G  G LGHG++E   VP  V  L 
Sbjct: 433 MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLV 492

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G      LG N  ADG                  
Sbjct: 493 EPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLG-NPQADG------------------ 533

Query: 370 QVNERVVQISLTNSIYWNA----HTFALTESGKLYAFGAGDKGQLG 411
           +V  RV    + N +   A    H   LT   ++Y +G G  G+LG
Sbjct: 534 KVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 579



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G    A+++++G V  FSWG +   RLGH  + +DV     + 
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEV--FSWGEELGGRLGHGVD-SDVSHPKFVD 318

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L+N  V  +A G  YL         + ++       G LG GS   +  PR +    L 
Sbjct: 319 GLKNFNVELVACGE-YLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSG-PLE 376

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    V+ G WH AVV   G++ T+G G +G LGHG+    S P+ V++L  ++ + VA
Sbjct: 377 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVA 436

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ A  L P  V
Sbjct: 437 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTYV 488

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L  V     Q++  +S+     T ALT SG++Y  G+   GQLG    N Q +   P 
Sbjct: 489 ATL--VEPSFCQVACGHSL-----TVALTTSGQVYTMGSPVYGQLG----NPQADGKVPT 537

Query: 426 RVDIDL 431
           RV+  L
Sbjct: 538 RVEGKL 543



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 23/254 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG       PR + SL+G+R ++ A G  
Sbjct: 381 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVW 440

Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +             G+++ +G    G   +G +  +LV  P  V +L      Q
Sbjct: 441 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLV--PTYVATLVEPSFCQ 498

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  T  L+  G+VYT       +LG+      V P  + G L    V ++A G  +
Sbjct: 499 VACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV-PTRVEGKLMKNFVEELACGAYH 557

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
           +  L    S   VY+ G G  G+LGHG   D   P ++E  +   ++ ++      AA  
Sbjct: 558 VAVLT---SRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAIC 614

Query: 269 WHAAVVGQDGRVCT 282
            H  V G D  +C+
Sbjct: 615 LHKWVSGIDQSMCS 628


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 13/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ +   G VY+ G N  GQLGH    +  +P  + SL    I+  + G   T+ +
Sbjct: 42  GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK--KPEQVVSLDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+A+G  S G+    +    L   P+ V+SL  + + Q A G + +  L+R G +
Sbjct: 100 NDKGQVFAWGLGSDGQLGLSIVEDCLRV-PRTVKSLSEVHITQVACGYWHSLALARGGEI 158

Query: 171 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             FSWG +   +LG   +   V    ++ +L+ IP  QI+AG  +   L    SG A++ 
Sbjct: 159 --FSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTL--SG-AIFG 213

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G   D + P L++   L + Q V +  G  H A + ++G V T+G G Y
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLK--TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGY 271

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           G LGH +   E  P+ V  L       +A G  +T   +   G + SFG G +  LG
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 28/356 (7%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR     +G R+     G   T+ + + G VY  G +  
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V SL    +V  + G   T  L+ +G+V+ +  G+D +LG  
Sbjct: 64  GQLGH----EKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
              + +     + +L  + + Q+A GY + LALA    G  ++S G    G+LG G +  
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA---RGGEIFSWGQNKYGQLGLGQQGA 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
               P++I+  Q +    +  +AG  H+  +   G +  WG  ++G LG G+ +    P 
Sbjct: 177 CVCSPQVIQSLQGIPFGQI--SAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPV 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           +++ L   + +++  G+  T  ++++G V++FG G    LGHN+      N   N   P+
Sbjct: 235 LLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PR 286

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLGIELVNNQ 418
            V  L  +   V QI+         HT A +  SGK+ +FG G  GQLG     N+
Sbjct: 287 KVFEL--MGSVVSQIACGRQ-----HTLAFIPSSGKIDSFGLGGNGQLGTRSTCNR 335



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 6/204 (2%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A+   G ++S+G N  GQLG G        P+ I+SLQGI   Q +AG 
Sbjct: 140 TQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGG 199

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  ++ +G ++ +G++ FG+   G    +    P L+++L++  VV    G   TA L
Sbjct: 200 AHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRF--PVLLKTLRSQQVVYICCGEDHTAAL 257

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           ++EG V+TF  G   +LGH++  ++V P  +   + ++ V QIA G  + LA    PS  
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSV-VSQIACGRQHTLAFI--PSSG 314

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHP 248
            + S G G  G+LG  S  +   P
Sbjct: 315 KIDSFGLGGNGQLGTRSTCNRISP 338



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG G  ++   P  +++L+  +++    G   
Sbjct: 194 QISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDH 253

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIP 311

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             G++ +F  G + +LG  +  N + P P+ G
Sbjct: 312 SSGKIDSFGLGGNGQLGTRSTCNRISPTPVKG 343


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 42/342 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ +  +  +     A G+   ++++  GQ++++G+ S G+  +G      V+ P+++++
Sbjct: 289 PKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADAD--VSQPKVIDA 346

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L    VV  A G F T  ++  G +YT  WG+D      LGH +  +   P  ++G +E+
Sbjct: 347 LSESNVVLVACGEFHTCAVTVSGNLYT--WGDDTHNTGYLGHGSAVSHWIPREVIGQIES 404

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + +  ++ G  +  A++ Q     +++ G G  G LGHG R+    PR +E  +   L+ 
Sbjct: 405 VRISFVSCGPWHTAAVSSQ---GKLFTFGDGTFGALGHGDRSSTSKPREVESLK--GLRT 459

Query: 262 VVVAAGAWHAAVV------------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           + V+ G WH A V               G++ TWG G  G LGHG+EE   VP  V    
Sbjct: 460 LKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPA 519

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            V    VA     T  ++  G VY+ G  +   LG +  + G+   H         T   
Sbjct: 520 GV--CQVACAHSMTIALTVLGQVYTMGAADYGQLG-SPCSVGKLPIH---------TDGD 567

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             N  + QI+  +      H  AL+ +G +Y +G G  GQLG
Sbjct: 568 IRNCHIKQIACGSH-----HVVALSSNGDVYTWGKGINGQLG 604



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 38/350 (10%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           ++Q IA G  H++ VT +G ++S+G +S G+LGHG   +  +P+ I +L    ++  A G
Sbjct: 299 DAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACG 358

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFT 161
              T  ++ +G +Y +G D+      G  G+ +      +++  ++++ +   + G + T
Sbjct: 359 EFHTCAVTVSGNLYTWGDDTHNTGYLG-HGSAVSHWIPREVIGQIESVRISFVSCGPWHT 417

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 216
           A +S +G+++TF  G    LGH    +  +P   + +L+ +  ++++ G  +  A     
Sbjct: 418 AAVSSQGKLFTFGDGTFGALGHGDRSSTSKPRE-VESLKGLRTLKVSCGIWHTAAVIDFI 476

Query: 217 -----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
                L    SG  +++ G G  G+LGHG    ++ PRL+     +++   V      H+
Sbjct: 477 NESDRLDTSLSG-KLFTWGAGERGQLGHG----DEEPRLVP--SCVSMPAGVCQVACAHS 529

Query: 272 AVVGQD--GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH---VATGDYTTFVV 326
             +     G+V T G   YG LG     C      +    D++  H   +A G +    +
Sbjct: 530 MTIALTVLGQVYTMGAADYGQLG---SPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVAL 586

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           S +GDVY++G G +  LGH  I D    RH    TP LV +LK    + V
Sbjct: 587 SSNGDVYTWGKGINGQLGHGDIKD----RH----TPTLVKALKHKQVKSV 628



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 29/293 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G ++  +G LGHG+    W PR  I  ++ +RI   + G   T
Sbjct: 358 GEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHT 417

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
             +S  G+++ FG  +FG   +G + +   + P+ VESLK +  ++ + G + TA +   
Sbjct: 418 AAVSSQGKLFTFGDGTFGALGHGDRSS--TSKPREVESLKGLRTLKVSCGIWHTAAVIDF 475

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCY 213
                    S  G+++T+  G   +LGH     D EP  L+ +  ++P  V Q+A  +  
Sbjct: 476 INESDRLDTSLSGKLFTWGAGERGQLGH----GDEEPR-LVPSCVSMPAGVCQVACAHSM 530

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            +AL        VY++G    G+LG       K P +     + N     +A G+ H   
Sbjct: 531 TIALTVLGQ---VYTMGAADYGQLGSPCSVG-KLP-IHTDGDIRNCHIKQIACGSHHVVA 585

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           +  +G V TWG G  G LGHG+ +    P +V+AL   +   V  G   T V+
Sbjct: 586 LSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNFTAVI 638



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 14/170 (8%)

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           R D   P+ +++   L+ Q  ++A G+ HA +V + G++ +WG    G LGHG +   S 
Sbjct: 283 RMDALLPKALDRIAALDAQ--IIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQ 340

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PKV+ AL++   + VA G++ T  V+  G++Y++G        HN    G G+  ++ + 
Sbjct: 341 PKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWG-----DDTHNTGYLGHGSAVSHWIP 395

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +++  ++      V+IS  +   W  HT A++  GKL+ FG G  G LG
Sbjct: 396 REVIGQIES-----VRISFVSCGPW--HTAAVSSQGKLFTFGDGTFGALG 438



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +A++S G VY++G   +GQLGHG  ++   P  +++L+  ++     G+  
Sbjct: 575 QIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNF 634

Query: 107 TMLI 110
           T +I
Sbjct: 635 TAVI 638


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 38/370 (10%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           ++  KG ++ +G+   G+LG G  E+E    P  +   +   I Q A G   T++I+  G
Sbjct: 26  SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDG 85

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           ++Y+ G + +G+  +     +L    QL+  L      + A G + T  ++  G++  FS
Sbjct: 86  KIYSCGNNDYGQLGHERGRKRL----QLILGLDAFVFKKVACGAYHTIAVNEWGQL--FS 139

Query: 175 WGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           WG+++  +LG +++ N +E  P ++ TL    +VQ+A G  + LAL    +   +YS G 
Sbjct: 140 WGSNSEGQLGLNSK-NFMECSPRMVKTLGTSIIVQVACGMKHALALT---NNGELYSWGS 195

Query: 232 GLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LG G     E  P+LI    L  +    +A G +H+  + + G +  WG   +G 
Sbjct: 196 NSEGQLGLGVDIRSEVKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 253

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG  + +  ++P  +Q L + K  + A G+  +  ++ DG V++ G G    LGH     
Sbjct: 254 LGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH----- 308

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQ 409
           G  N   N + P+ V  L  +   V QIS         HT AL  S G++YA+G G  GQ
Sbjct: 309 GSNN---NEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSQGRVYAWGLGGAGQ 358

Query: 410 LGIELVNNQT 419
           LG    NN T
Sbjct: 359 LG----NNST 364



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 23/326 (7%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  +++ +T  G +YS G+N  GQLGH    +  R + I  L      + A G
Sbjct: 67  EIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRK--RLQLILGLDAFVFKKVACG 124

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 162
           A  T+ +++ GQ++++G +S  E + G+     +  SP++V++L    +VQ A G     
Sbjct: 125 AYHTIAVNEWGQLFSWGSNS--EGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHAL 182

Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            L+  G +Y++   ++ +LG   +  ++V+P  L+ TL  +P+  IA G  +  ++A   
Sbjct: 183 ALTNNGELYSWGSNSEGQLGLGVDIRSEVKPK-LINTLAGVPIAFIACGGYH--SIAISK 239

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQDGRV 280
           SG A++  G    G+LG     D ++  L  Q Q L N +    A G   +  +  DG V
Sbjct: 240 SG-AIFGWGKNTFGQLG---LNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGV 295

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 339
            T G G YG LGHG+   E +P+ V  L       ++ G  +T  +V   G VY++G G 
Sbjct: 296 FTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 355

Query: 340 SASLGHNAIADGQGNRHANVLTPQLV 365
           +  LG+N+          ++ TPQ+V
Sbjct: 356 AGQLGNNST--------RSIPTPQVV 373


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 43/386 (11%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           TS   ++ +G      L HG   +     PR + +   I +   A G     +++  G+V
Sbjct: 165 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 224

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           +++G D+ G   + V  +  V+ P+++ESL +  V   A G   T  +S  G +Y   WG
Sbjct: 225 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 280

Query: 177 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                    G   + +   PH L G L+ I +++IA G+ +   ++   S   +++ G G
Sbjct: 281 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQLFAYGDG 337

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCT 282
             G LGHG       P+ +E   L  ++   +A G WH A +             G++ T
Sbjct: 338 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 395

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LGH +++ + VP  V+ LND     V+     T V++  G V++ G  E   
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+    D          T   +       E V +IS  +S     H   LT +GK++ +
Sbjct: 456 LGNPLSED----------TSICLIEGPLKTEFVREISSGSS-----HIAVLTMNGKVFTW 500

Query: 403 GAGDKGQLGIELVNNQTERGNPERVD 428
           G G +GQLG+    +  +R  P  V+
Sbjct: 501 GKGTEGQLGL---GDYVDRSYPTLVE 523



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 34/300 (11%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
           +AIA G  H+ AV+  G +Y +G  +   G  G      +W P  +   L GI I++ A 
Sbjct: 258 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 317

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T +IS AGQ++A+G  +FG   +G   T  V  P+ VESLK +     A G + TA
Sbjct: 318 GHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 375

Query: 163 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 207
            ++ R G V +       F+WG+  R  LGH  +     P  VEP      L +    Q+
Sbjct: 376 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 429

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
           +      + L    +G+ V+++G    G+LG+   +++    LIE    L  + V  +++
Sbjct: 430 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 483

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   +A G   T  +
Sbjct: 484 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q       +I +T  GVV++ GS   G+LG+  +E+         L+   + + ++G+ 
Sbjct: 427 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 486

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              +++  G+V+ +GK +  E + G+      + P LVE+L++  V   A G  FT  +
Sbjct: 487 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
           Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 245

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
            G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 246 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 303

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           ++ +G+++TF  G+  RLG     N   P   +  LE   + Q+A G  + LA++    G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-RVTALEGYQIGQVACGLNHTLAVSA--DG 360

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +DG V T+
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 418

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G  R   L  G     + P+ +  L  V    VA G   T  ++  GDVY++G      L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478

Query: 344 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           G           H N V  P LVT L+  N R +     +S  W A
Sbjct: 479 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 515



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 284 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 343

Query: 98  IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
            Q A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I + + A 
Sbjct: 344 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 401

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
           G  F+  L+++G VYTF  G D  +G       +H  P  +        L  + +  +A 
Sbjct: 402 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDVAV 453

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  
Sbjct: 454 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 508

Query: 270 HAA 272
           H+A
Sbjct: 509 HSA 511



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 229 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
           + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 204 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 263

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 264 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 321

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
                G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 322 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 368

Query: 405 GDKGQLGIELVNNQTERGNPERVDI 429
           GD G+LG+    N T + +P++VD+
Sbjct: 369 GDYGKLGL---GNSTAKSSPQKVDV 390



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
           Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 243

Query: 158 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
             +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 244 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 302

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 303 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 357

Query: 276 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 358 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 417

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 418 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 462

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTE 420
            +G +YA+G+  +GQLG+   N+  E
Sbjct: 463 STGDVYAWGSNSEGQLGLGHTNHVRE 488


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL 
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G         +A+    GN  A+ L P  V    
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG       PR + SL+G+R ++AA G   T  +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + ++ V  P  V +L      Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGSDQSMCS 668



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I SL  + I   A G   T  ++ +
Sbjct: 322 HAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLS 381

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 382 GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFT 441

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G      ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 442 FGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 501

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  + +   P   +  L      Q+A G+C  +AL    +   VY+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGHVYT 557

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 558 MGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 615

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 616 GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 38/306 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ +    P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 426 RVDIDL 431
           RV+  L
Sbjct: 578 RVEGKL 583



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           ++ D   P+ +E    L++Q   ++ G  HAA+V + G + +WG    G LGHG +   +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQ--NISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 358
            PK++ +L  +    VA G+Y T  V+  GD+Y++G G  +   LGH       GN  ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 15/298 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  +    +P  + +L    I+  + G   T+ +
Sbjct: 42  GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+++G   +G+        + +  P+ ++SL ++ +VQ A G+  +  LS++  +
Sbjct: 100 NDKGQVFSWGHAVYGQIGLST-AEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDI 158

Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             FSWG +   +LG   E         + +L  IP   IAAG  +  AL    SG A++ 
Sbjct: 159 --FSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFG 213

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG    TD   P L++    L  Q ++ +  G  H A + ++G V T+G G 
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKS---LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
           YG LGH +   E  P+ V  L       +A G  +T   V   G +YSFG G +  LG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 32/351 (9%)

Query: 67  FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR         +     G+  T+ + D G VY  G +  
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+V  FSWG+    ++G
Sbjct: 64  GQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIG 117

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             T    +     + +L ++ +VQ+A G+ + LAL+       ++S G    G+LG G  
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLE 174

Query: 243 TD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
              E  PR I+   L  +    +AAG  H+  +   G +  WG  ++G LG  +E   +V
Sbjct: 175 IKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P ++++L   K IH+  G+  T  ++++G V++FG G    LGHN+      N   N   
Sbjct: 233 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN--- 284

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
           P+ V  L  +   V QI+         HT A    SG++Y+FG G  GQLG
Sbjct: 285 PRKVFEL--MGSIVTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    ++S+G N  GQLG G   ++E  PR I+SL GI     AAG G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++ +G ++ +G++ FG+   G+        P L++SL++  ++    G   TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFGQL--GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  ++V P  +   + +I V QIA G  + LA    PS   
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS  + K P
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSP 338



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A+  KG V+S+G    GQ+G  T EE  R PR I+SL  ++I+Q A G   ++ 
Sbjct: 92  GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S    ++++G++ +G+   G++  K   +P+ ++SL  I     A G   +  L+  G 
Sbjct: 152 LSKDSDIFSWGQNQYGQLGLGLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +  F WG +   +LG  T+  D     LL +L +  ++ I  G  +  AL  +     V+
Sbjct: 211 I--FGWGRNKFGQLG-LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 264

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S   E +PR +  F+L+      +A G  H  A V   GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 322

Query: 287 RYGCLGHGNEECESVPKVVQ 306
             G LG G+      P  V+
Sbjct: 323 GNGQLGTGSTINRKSPFTVK 342



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 3/149 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS A+T  G ++ +G N  GQLG     +   P  ++SL+  +II    G   T  
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
           ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A +   G
Sbjct: 257 LTKEGGVFTFGAGGYGQL--GHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 314

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           R+Y+F  G + +LG  +  N   P  + G
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKG 343


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 130/279 (46%), Gaps = 36/279 (12%)

Query: 86   PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
            P P+R     R++Q A G   T LI+D   +Y FG    G   +G +     T P  V  
Sbjct: 1240 PPPLR-----RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEED--CTDPIPVGY 1292

Query: 146  LKNIF---------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
              ++          VV  + G   T V++  G +Y F WG   RLG  T       +P  
Sbjct: 1293 FTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLG--TGETGSSLYPSR 1350

Query: 197  GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
              L NI  V  A G  + LAL    S   V++ G G GG+LG+GS TDE+ P L+E  + 
Sbjct: 1351 VDLRNIAAV--ACGREHTLALT---SKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEE 1405

Query: 257  LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--------- 307
             ++  V +AAG  H+  + +DG V TWG+G  G LGHG  +   +P +V           
Sbjct: 1406 YSI--VAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVET 1463

Query: 308  -LNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             ++D+  +  VA G Y T   + DG +Y +G   +  LG
Sbjct: 1464 LIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLG 1502



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 28/280 (10%)

Query: 151  VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-----LGTLENIP-- 203
            VVQ A G   TA+++ +  +YTF  G   RLGH TE +  +P P+     L   E +   
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 204  -VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
             VV ++ G  + + +        +Y  G G  G+LG G      +P  ++   L N+   
Sbjct: 1306 GVVDVSCGREHTMVVT---GNGDLYGFGWGEAGRLGTGETGSSLYPSRVD---LRNI--A 1357

Query: 263  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
             VA G  H   +   GRV  +G G  G LG+G+E  E +P +V+ L +   + +A G+  
Sbjct: 1358 AVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECH 1417

Query: 323  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---SLKQVNERVVQIS 379
            +  +S DG+V ++G G S +LGH       G R  N L P LV    +   V   +  IS
Sbjct: 1418 SCALSRDGEVLTWGFGSSGALGH-------GTRD-NCLIPTLVDGPWTNPNVETLIHDIS 1469

Query: 380  LTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            +  S+   + HT A T  G LY +G    GQLG E ++ Q
Sbjct: 1470 VVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQ 1509



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 31/316 (9%)

Query: 43   RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI---RSL---QGIR 96
            R   Q   G  H+  +T    +Y+FG    G+LGHGT E+   P P+    SL   +G+ 
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVE 1303

Query: 97   ---IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
               ++  + G   TM+++  G +Y FG    G    G  G+ L   P  V+ L+NI  V 
Sbjct: 1304 FGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLY--PSRVD-LRNIAAV- 1359

Query: 154  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
             A G   T  L+ +GRV+ F  G   RLG+ +E ++  P  L+  LE   +V IAAG C+
Sbjct: 1360 -ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPF-LVEGLEEYSIVAIAAGECH 1417

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV--------V 264
              AL+       V + G G  G LGHG+R +   P L++  +   N++ ++        V
Sbjct: 1418 SCALS---RDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSV 1474

Query: 265  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGD 320
            A G++H      DG +  WG    G LG  +   + +    PK ++         +A G 
Sbjct: 1475 ACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGT 1534

Query: 321  YTTFVVSEDGDVYSFG 336
            +T+ V S  G ++ +G
Sbjct: 1535 FTSAVCSTQGQLFMWG 1550



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 9/118 (7%)

Query: 312  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
            + + +A G   T ++++D  +Y+FG GE   LGH    D          T  L+ +    
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFT-SLIAAEGVE 1303

Query: 372  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
               VV +S         HT  +T +G LY FG G+ G+LG     +      P RVD+
Sbjct: 1304 FGGVVDVSCGRE-----HTMVVTGNGDLYGFGWGEAGRLGTGETGSSL---YPSRVDL 1353


>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
 gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
          Length = 484

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 159/360 (44%), Gaps = 59/360 (16%)

Query: 23  CGGS-WKLVLRFLLAGEACCRRENSQAIAGPG--------------------HSIAVTSK 61
           CGG+ W L+ R  L   A       Q + GP                     HSI +T  
Sbjct: 72  CGGTNWDLIGRNQLPKNATGSANRGQNLWGPHRYGSMSGVRVRSVISGPTSVHSILITED 131

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G   S+G N  GQLGHG T+    P  I SL G  I++AA G   T+ ++D G+V+AFG+
Sbjct: 132 GKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGFNIVEAACGRNHTLCLTDDGKVFAFGE 191

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           +  G+   G +   + +  Q+V +     VV+ A G  F+ V+   G +Y+F      +L
Sbjct: 192 NKMGQLGLGNENAAVPSPTQIVYT--GPPVVKVACGAEFSMVIDCRGALYSFGCPEYGQL 249

Query: 182 GHHTEPN----------DVEPHP-------------LLGTLENIPVVQIAAGYCYLLALA 218
           G++T+            D E  P              +  + N+ +V I  G  + +AL 
Sbjct: 250 GNNTDGQYFVTSNKMAYDCELVPRRISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALD 309

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
            Q     V++ G G  G+LGH  + DE  PRL++ F         + AGA+++  +  +G
Sbjct: 310 KQ---KRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFDYPGRGARTIYAGAFYSMGIMDNG 366

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
               + WG+    G  N      PK VQ L+  DV+++  +     + VV+ D    S+G
Sbjct: 367 GQL-YLWGQTKTTGEAN----MYPKPVQDLSGWDVRSVGCSN---RSIVVAADESTISWG 418



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G++  + V  + +G   + ++     G A+ S G    G+LGHG       P +I
Sbjct: 102 PH-RYGSMSGVRVRSVISGPTSVHSILITEDGKAM-SWGRNDKGQLGHGDTKRVDVPTVI 159

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-ND 310
           E     N+  V  A G  H   +  DG+V  +G  + G LG GNE   +VP   Q +   
Sbjct: 160 ESLAGFNI--VEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNENA-AVPSPTQIVYTG 216

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ----GNRHAN--VLTPQL 364
              + VA G   + V+   G +YSFGC E   LG+N   DGQ     N+ A    L P+ 
Sbjct: 217 PPVVKVACGAEFSMVIDCRGALYSFGCPEYGQLGNN--TDGQYFVTSNKMAYDCELVPRR 274

Query: 365 VTSLKQVNER-----VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           ++   +  +      +  + L +      HT AL +  +++ +G G  G+LG
Sbjct: 275 ISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLG 326



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 30/130 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYG +        S  +V   ++   ++H       + +++EDG   S+G  +   
Sbjct: 100 WGPHRYGSM--------SGVRVRSVISGPTSVH-------SILITEDGKAMSWGRNDKGQ 144

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P ++ SL   N  +V+ +   +     HT  LT+ GK++AF
Sbjct: 145 LGH-----GDTKR---VDVPTVIESLAGFN--IVEAACGRN-----HTLCLTDDGKVFAF 189

Query: 403 GAGDKGQLGI 412
           G    GQLG+
Sbjct: 190 GENKMGQLGL 199



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 52  PGHSIAVTSKGVVYSFG-SNSSGQL-----GHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           PG        G  YS G  ++ GQL        T E    P+P++ L G   +++   + 
Sbjct: 345 PGRGARTIYAGAFYSMGIMDNGGQLYLWGQTKTTGEANMYPKPVQDLSGWD-VRSVGCSN 403

Query: 106 RTMLISDAGQVYAFGKD-SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           R+++++      ++G   ++GE  YG    K  T P+ V++L  I++ + + G   T  +
Sbjct: 404 RSIVVAADESTISWGPSPTYGELGYGENKAKSSTIPKEVKTLDGIYIHKVSCGYGHTIFI 463

Query: 165 SR 166
           +R
Sbjct: 464 AR 465


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL 
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G         +A+    GN  A+ L P  V    
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG       PR + SL+G+R ++AA G   T  +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + ++ V  P  V +L      Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGSDQSMCS 668



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I SL  + I   A G   T  ++ +
Sbjct: 322 HAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLS 381

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 382 GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFT 441

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G      ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 442 FGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 501

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  + +   P   +  L      Q+A G+C  +AL    +   VY+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGHVYT 557

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 558 MGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 615

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 616 GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ +    P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 426 RVD 428
           RV+
Sbjct: 578 RVE 580



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           ++ D   P+ +E    L++Q +  + G  HAA+V + G + +WG    G LGHG +   +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 358
            PK++ +L  +    VA G+Y T  V+  GD+Y++G G  +   LGH       GN  ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL 
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G         +A+    GN  A+ L P  V    
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG       PR + SL+G+R ++AA G   T  +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + ++ V  P  V +L      Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGSDQSMCS 668



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I SL  + I   A G   T  ++ +
Sbjct: 322 HAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLS 381

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 382 GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFT 441

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G      ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 442 FGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 501

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  + +   P   +  L      Q+A G+C  +AL    +   VY+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGHVYT 557

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 558 MGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 615

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 616 GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ +    P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 426 RVD 428
           RV+
Sbjct: 578 RVE 580



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           ++ D   P+ +E    L++Q +  + G  HAA+V + G + +WG    G LGHG +   +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 358
            PK++ +L  +    VA G+Y T  V+  GD+Y++G G  +   LGH       GN  ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+     + +   + G     L++  G++Y++G++S G   +GV     V  P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + G LE 
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG+++   VP  V AL 
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G         +A+    GN  A+ L P  V    
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
              E  +  +    I   A H   LT   ++Y +G G  G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  S G LGHG       PR + SL+G+R ++AA G   T  +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + ++ V  P  V +L      Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + + + P  + G L    V +I+ G  ++  L 
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D+  P L+E  +   ++ VV      AA   H  V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 660 SGSDQSMCS 668



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 71/331 (21%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G +YS+G  S G+LGHG   +  +P+ I SL  + I   A G   T  ++ +
Sbjct: 322 HAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLS 381

Query: 114 GQVYAFGKD--------------------------------------------------S 123
           G +Y +G                                                    +
Sbjct: 382 GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFT 441

Query: 124 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 168
           FG+  +GV G      ++ P+ VESLK +  V+AA G + TA +               G
Sbjct: 442 FGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 501

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +++T+  G+  RLGH  + +   P   +  L      Q+A G+C  +AL    +   VY+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGHVYT 557

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           +G  + G+LG+  + D   P  +E     N     ++ GA+H AV+     V TWG G  
Sbjct: 558 MGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 615

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 616 GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 38/303 (12%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
            G + T  V E             G ++++G G+   LGH       G++ +    P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 426 RVD 428
           RV+
Sbjct: 578 RVE 580



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           ++ D   P+ +E    L++Q +  + G  HAA+V + G + +WG    G LGHG +   +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 358
            PK++ +L  +    VA G+Y T  V+  GD+Y++G G  +   LGH       GN  ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 174/345 (50%), Gaps = 18/345 (5%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G  +T    RP+ + SL G+ I     G+   + +  +G++ ++G+   G+   G     
Sbjct: 90  GRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQ--LGHASFS 147

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
             ++P +++ L +  V + A G  F+A L   G++YT+      +LG     +   P  +
Sbjct: 148 HSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPR-M 206

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH---PRLIE 252
           L ++ +  V  +A G  +++ L    +   VY+ G    G+LGHG R  +KH   P+ + 
Sbjct: 207 LPSMNHRHVHLMACGAAHIVVLT---TSRDVYTWGNNSYGQLGHGFR--KKHCLQPKSVR 261

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DV 311
               L+++ +V  AG  H+ V+   G + TWG G +G LGHG+ E + +P ++  L+   
Sbjct: 262 VMSGLDIKQIV--AGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKT 319

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGNRH-ANVLTPQLVTSLK 369
           +A  + +G      ++  G VYS+G      LGH   +   + NR  ++V++P+++ S  
Sbjct: 320 QASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKII-SFF 378

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQLGIE 413
             +E    ISL++    + H  A+TE    L+A+G G+ GQLG++
Sbjct: 379 AASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLD 423



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 166/387 (42%), Gaps = 46/387 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H +A+ + G + S+G   SGQLGH +      P  I  L   R+ + A G   +  +
Sbjct: 117 GSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAAL 176

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
            + GQ+Y +G + +G+   G + +  +  P+++ S+ +  V   A G     VL+    V
Sbjct: 177 MEGGQLYTWGCNRYGQLGQGDRTSSAI--PRMLPSMNHRHVHLMACGAAHIVVLTTSRDV 234

Query: 171 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           YT  WGN++  +LGH            +  +  + + QI AG  +   +    S   +Y+
Sbjct: 235 YT--WGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT---SFGDIYT 289

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G+LGHG    +  P L+        Q  ++ +GA     +   G V +WG   +
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPLD-PKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348

Query: 289 GCLGHGNEECES----------VPKVVQ---ALNDVKAIHVAT---GDYTTFVVSEDGD- 331
           G LGHG +   S           PK++    A  +  AI +++   G +    ++E  D 
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDT 408

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           ++++G GE   LG     D +      +  PQ V  +K +      I L  +   N    
Sbjct: 409 LFAWGRGEHGQLG----LDPRDTSFRPI--PQEVKKMKGM------IVLAAACSENHSVV 456

Query: 392 ALTESG-------KLYAFGAGDKGQLG 411
             T  G       K++++G G  GQLG
Sbjct: 457 VATMPGSGPKGDMKVFSWGRGSFGQLG 483



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 37/285 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H + +T+   VY++G+NS GQLGHG  ++   +P+ +R + G+ I Q  AG   + +
Sbjct: 221 GAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCV 280

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSR 166
           ++  G +Y +G+  FG+  +G   +K +  P L+  L      QA++   G  F   ++ 
Sbjct: 281 MTSFGDIYTWGRGDFGQLGHGDMESKDI--PTLLSPLDP--KTQASLIVSGADFIMAMTY 336

Query: 167 EGRVYTFSWGND--ARLGHHTE---------PNDVEPHPLLGTL------ENIPVVQIAA 209
            G VY  SWG +   +LGH  +         P+DV    ++         + I +  I+ 
Sbjct: 337 SGAVY--SWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISC 394

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  ++LA+  +     +++ G G  G+LG   R     P   E  ++  +  +  A    
Sbjct: 395 GSHHVLAITEKKD--TLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSEN 452

Query: 270 HAAVVGQ--------DGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           H+ VV          D +V +WG G +G LG+G+ +   + + VQ
Sbjct: 453 HSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGSGKVPVMKETVQ 497



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 37/326 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   S A+   G +Y++G N  GQLG G       PR + S+    +   A GA   +++
Sbjct: 169 GVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVL 228

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           + +  VY +G +S+G+  +G +  K    P+ V  +  + + Q   G   + V++  G +
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFR-KKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDI 287

Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQ---IAAGYCYLLALACQPSGMAV 226
           YT+  G+  +LGH   E  D+    LL  L+  P  Q   I +G  +++A+    SG AV
Sbjct: 288 YTWGRGDFGQLGHGDMESKDIP--TLLSPLD--PKTQASLIVSGADFIMAMTY--SG-AV 340

Query: 227 YSVGCGLGGKLGHGSR----------TDEKHPRLIEQFQLLNLQPVV----VAAGAWHA- 271
           YS G    G+LGHG            +D   P++I  F        +    ++ G+ H  
Sbjct: 341 YSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVL 400

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSE- 328
           A+  +   +  WG G +G LG    +     +P+ V+ +  +  +  A  +  + VV+  
Sbjct: 401 AITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATM 460

Query: 329 -------DGDVYSFGCGESASLGHNA 347
                  D  V+S+G G    LG+ +
Sbjct: 461 PGSGPKGDMKVFSWGRGSFGQLGYGS 486



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           HG  +     R  E   L  L   ++  G+ H   +   G++ +WG G  G LGH +   
Sbjct: 89  HGRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSH 148

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            S P ++  L   +   VA G   +  + E G +Y++GC     L       GQG+R ++
Sbjct: 149 SSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQL-------GQGDRTSS 201

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            + P+++ S+   N R V +    +    AH   LT S  +Y +G    GQLG
Sbjct: 202 AI-PRMLPSM---NHRHVHLMACGA----AHIVVLTTSRDVYTWGNNSYGQLG 246



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 23/158 (14%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT----TEEEWRPRPIRSLQGIRI 97
           + + S  ++G    +A+T  G VYS+G N  GQLGHG     ++    P  + S + I  
Sbjct: 318 KTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISF 377

Query: 98  IQA------------AAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
             A            + G+   + I++    ++A+G+   G+     + T     PQ V+
Sbjct: 378 FAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVK 437

Query: 145 SLKNIFVVQAAIGNFFTAVLSR------EGRVYTFSWG 176
            +K + V+ AA     + V++       +G +  FSWG
Sbjct: 438 KMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWG 475


>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
           nagariensis]
 gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
           nagariensis]
          Length = 942

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 145/288 (50%), Gaps = 26/288 (9%)

Query: 30  VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
           +L   ++G + CR   +  +AG  +++A+ + G V+SFG N  G LGHG  + E +P+ I
Sbjct: 281 LLGVQISGRSFCR---TPLVAGSRNTMALDAAGQVWSFGWNDRGTLGHGHRDVETKPKRI 337

Query: 90  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLK 147
            +L+GIRI+Q A G    + +SD G ++A+G + +G+    + G + +T P  V+     
Sbjct: 338 PALKGIRIVQVAIGGWHCLALSDRGTMFAWGGNEYGQCGSVLPGQRDITEPMPVDLGLGP 397

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTF--SWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           +  V Q + G   +  L  +G V+ +  +WG D  +     P  V  HP  G      V 
Sbjct: 398 SQRVRQVSAGGMHSLALLEDGMVWQWGENWG-DFSMRPVRTPRPVAVHPDEGG-----VA 451

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV- 264
            ++ G  + LAL  Q     V S G    G+LG+GS T    PR +     L+++ VVV 
Sbjct: 452 AVSCGAFHNLALTAQ---GRVLSWGMNDYGQLGNGSTTYATTPRPV-----LDMEGVVVA 503

Query: 265 --AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQAL 308
             AAG WH+  +   G V  WG G YG LG G+    S   P+ V+ L
Sbjct: 504 DIAAGGWHSCALSSAGEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGL 551



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 40/326 (12%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI-------IQAAAGAGRTMLISDA 113
           + VV+ +G +  GQLG    E    P+ + +L G++I           AG+  TM +  A
Sbjct: 250 EAVVFGWGVSEDGQLGVEERENVVAPKVVEALLGVQISGRSFCRTPLVAGSRNTMALDAA 309

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           GQV++FG +  G   +G +  +  T P+ + +LK I +VQ AIG +    LS  G +  F
Sbjct: 310 GQVWSFGWNDRGTLGHGHRDVE--TKPKRIPALKGIRIVQVAIGGWHCLALSDRGTM--F 365

Query: 174 SWGND--ARLGH--HTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +WG +   + G     + +  EP P+ LG   +  V Q++AG  + LAL     GM    
Sbjct: 366 AWGGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALL--EDGMV--- 420

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAGAWHAAVVGQDGRVCTW 283
                G   G  S    + PR +       + P       V+ GA+H   +   GRV +W
Sbjct: 421 --WQWGENWGDFSMRPVRTPRPVA------VHPDEGGVAAVSCGAFHNLALTAQGRVLSW 472

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LG+G+    + P+ V  +  V    +A G + +  +S  G+V+ +G GE   L
Sbjct: 473 GMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSAGEVWVWGRGEYGRL 532

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLK 369
           G   + D  G   ++ L PQ V  L+
Sbjct: 533 G---LGDRSG---SSKLRPQKVRGLE 552



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 58/100 (58%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+T++G V S+G N  GQLG+G+T     PRP+  ++G+ +   AAG   +  +S A
Sbjct: 459 HNLALTAQGRVLSWGMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSA 518

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G+V+ +G+  +G    G +       PQ V  L++  VVQ
Sbjct: 519 GEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGLESHVVVQ 558



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 137/313 (43%), Gaps = 43/313 (13%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV-------VQAAIGNFFTAVLSRE 167
           +   FG     + + GV+  + V +P++VE+L  + +            G+  T  L   
Sbjct: 250 EAVVFGWGVSEDGQLGVEERENVVAPKVVEALLGVQISGRSFCRTPLVAGSRNTMALDAA 309

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G+V++F W +   LGH     DVE  P  +  L+ I +VQ+A G  + LAL+ + +  A 
Sbjct: 310 GQVWSFGWNDRGTLGHGHR--DVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGTMFAW 367

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCT 282
                G  G +  G R D   P  ++    L L P      V+AG  H+  + +DG V  
Sbjct: 368 GGNEYGQCGSVLPGQR-DITEPMPVD----LGLGPSQRVRQVSAGGMHSLALLEDGMVWQ 422

Query: 283 WG--WGRYGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGE 339
           WG  WG +      +      P+ V    D   +  V+ G +    ++  G V S+G  +
Sbjct: 423 WGENWGDF------SMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGRVLSWGMND 476

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG+ +             TP+ V  ++ V   V  I+      W  H+ AL+ +G++
Sbjct: 477 YGQLGNGSTT--------YATTPRPVLDMEGV--VVADIAAGG---W--HSCALSSAGEV 521

Query: 400 YAFGAGDKGQLGI 412
           + +G G+ G+LG+
Sbjct: 522 WVWGRGEYGRLGL 534



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ---------PVVVAAGAWHA 271
           P    V+  G    G+LG   R +   P+++E   LL +Q         P+V  AG+ + 
Sbjct: 248 PIEAVVFGWGVSEDGQLGVEERENVVAPKVVEA--LLGVQISGRSFCRTPLV--AGSRNT 303

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +   G+V ++GW   G LGHG+ + E+ PK + AL  ++ + VA G +    +S+ G 
Sbjct: 304 MALDAAGQVWSFGWNDRGTLGHGHRDVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGT 363

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           ++++G  E    G  ++  GQ     ++  P  V      ++RV Q+S         H+ 
Sbjct: 364 MFAWGGNEYGQCG--SVLPGQ----RDITEPMPVDLGLGPSQRVRQVSAG-----GMHSL 412

Query: 392 ALTESGKLYAFG 403
           AL E G ++ +G
Sbjct: 413 ALLEDGMVWQWG 424


>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 140/296 (47%), Gaps = 16/296 (5%)

Query: 1   MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLL-----AGEACCRRENSQAIAGPGHS 55
           +C  RA F  M  A R  L ++CGGSWK VLRFL      +G       + Q   G  H+
Sbjct: 55  LCAARAAFAAMGPAARGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGSMQVATGRYHT 114

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTMLISDAG 114
           + V     VYS GS+  G LGHG    +       S   +  +I  +A       + ++G
Sbjct: 115 LLVHDSS-VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESG 173

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V+  G +S     +G  G + +  P  VE+LK I   Q A G  FT +L+R+G+VYT  
Sbjct: 174 EVFTCGDNSSLCCGHGEVG-RTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCG 232

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                +LGH    +   P  L+   E + PVVQIAAG  Y  A+        V+S G   
Sbjct: 233 SNTHGQLGHGDTIDRATP-KLIELFEGSTPVVQIAAGASYTFAVT---DDGTVHSFGSCT 288

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RY 288
              LGHG + DE  PR I+ F+  N+  V V+AG  HA  +   G V  W  G RY
Sbjct: 289 NFCLGHGDQHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYV--WCSGERY 342



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 25/219 (11%)

Query: 197 GTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           GT+E     +Q+A G  + L +       +VYS G  L G LGHG   D        +  
Sbjct: 96  GTVETTSGSMQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVS 149

Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 312
             +L  V+ ++A   HAA V + G V T G     C GHG E   ++  P  V+AL  + 
Sbjct: 150 FPSLSCVINISASHNHAAFVLESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIP 208

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VATG   T +++ DG VY+ G      LGH    D          TP+L+  L + +
Sbjct: 209 CKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRA--------TPKLI-ELFEGS 259

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             VVQI+   S     +TFA+T+ G +++FG+     LG
Sbjct: 260 TPVVQIAAGAS-----YTFAVTDDGTVHSFGSCTNFCLG 293



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 14/141 (9%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYT 322
           VA G     ++ +DG+V T G   +G LGHG+    + PK+++        + +A G   
Sbjct: 212 VATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASY 271

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           TF V++DG V+SFG   +  LGH       G++H  +L P+ + S K  N  VV++S  +
Sbjct: 272 TFAVTDDGTVHSFGSCTNFCLGH-------GDQHDELL-PRAIQSFKWRNIHVVRVSAGD 323

Query: 383 SIYWNAHTFALTESGKLYAFG 403
                 H  AL   G ++  G
Sbjct: 324 E-----HAVALDALGYVWCSG 339


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 157/360 (43%), Gaps = 45/360 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     +++  G+V+++G +S G   +GV     V  P+L+ES
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSD--VPHPKLIES 353

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L N  +   A G + T  ++  G +YT  WG    N   LGH  + +   P  + G LE 
Sbjct: 354 LSNTNIELVACGEYHTCAVTLSGDLYT--WGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG 411

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  I+ G  +   +    S   +++ G G  G LGHG R     PR IE   L  L+ 
Sbjct: 412 IHVSSISCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRKSVSLPREIE--SLKGLRT 466

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E + VP  V  L+
Sbjct: 467 VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLD 526

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  +S  G VY+ G      LG N  ADG+      + TP       
Sbjct: 527 EPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLG-NTQADGK------LPTPV------ 573

Query: 370 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
              E  +  S    I   A H   LT   +++ +G G  G LG    N   +R  P  V+
Sbjct: 574 ---EGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTN---DRNTPTLVE 627



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 152/346 (43%), Gaps = 72/346 (20%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q IA G  H+  VT +G V+S+G  S G+LGHG   +   P+ I SL    I   A G  
Sbjct: 308 QNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEY 367

Query: 106 RTMLISDAGQVYAFGKD------------------------------------------- 122
            T  ++ +G +Y +G                                             
Sbjct: 368 HTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 427

Query: 123 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 164
                  +FG+  +GV G    K V+ P+ +ESLK +  VQAA G + TA +        
Sbjct: 428 TSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNS 487

Query: 165 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
                  G+++T+  G+  RLGH  + + + P  ++ TL+     Q+A G+   +AL+  
Sbjct: 488 SSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVV-TLDEPNFCQVACGHSMTVALS-- 544

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
                VY++G  + G LG+ ++ D K P  +E  +L       +A GA+H AV+     V
Sbjct: 545 -RLGHVYTMGSCVYGHLGN-TQADGKLPTPVEG-KLSKSFVEEIACGAYHVAVLTSRTEV 601

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            TWG G  GCLGHG+    + P +V+AL D +   +A G   T  +
Sbjct: 602 FTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 647



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 149/360 (41%), Gaps = 42/360 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  +    PR I SL+G+R +QAA G   T  +
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAV 479

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + +KLV  P  V +L      Q A G+
Sbjct: 480 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV--PTRVVTLDEPNFCQVACGH 537

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  LSR G VYT        LG +T+ +   P P+ G L    V +IA G  ++  L 
Sbjct: 538 SMTVALSRLGHVYTMGSCVYGHLG-NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLT 596

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   V++ G G  G LGHG   D   P L+E  +   ++ +       AA   H  V
Sbjct: 597 ---SRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 653

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
            G D  +C+       +   R+ C   G   C S       K   A N  K   V    +
Sbjct: 654 SGVDQSMCSGCRVPFNFKRKRHNCYNCGLAFCHSCSNKKSVKASMAPNPNKPYRVCDNCF 713

Query: 322 TTFVVSEDGDVYS------FGCGESASLGHNAIADGQGNRHANVLTP-QLVTSLKQVNER 374
                + + D  S       G     SL  N   D   +R  N L     + SLKQV+ R
Sbjct: 714 NKIRKTTETDSSSQASMSRRGSVNQGSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSR 773



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 14/172 (8%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G + D   P+ +E   +L++Q +  A G  HAA+V + G V +WG    G LGHG +   
Sbjct: 288 GVKMDSLLPKALESAVVLDVQNI--ACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDV 345

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             PK++++L++     VA G+Y T  V+  GD+Y++G G      +N    G GN+ ++ 
Sbjct: 346 PHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGT-----YNYGLLGHGNQVSHW 400

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +        K+VN  +  I +++      HT  +T SG+L+ FG G  G LG
Sbjct: 401 VP-------KRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLG 445


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +++ G LGHG+    W P+ I  SL+G+ +   + G   T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  G+++ FG  +FG   +G + T  V  P+ VESL  +  +  + G + TA +   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L    SG  V+++G  + G+LG+  +TD K P L+E  +L +     ++ GA+H A + 
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG+ E   VP +V+AL D    ++A G +YT  +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 158/343 (46%), Gaps = 41/343 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329

Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 200
           L     V   A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G+LE
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGSLE 387

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            + V  ++ G  +   +    S   +++ G G  G LGHG +   ++PR +E   L  L+
Sbjct: 388 GLHVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLR 442

Query: 261 PVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            + V+ G WH A V +             G++ TWG G    LGHG+++    P  V AL
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPAL 502

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     +A G   T  ++  G V++ G      LG N   DG+         P LV   
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED- 552

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           K  +E V +IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 553 KLASEFVEEISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 37/291 (12%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 326

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 252
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  L    V+ G WH A++   GR+ T+G G +G LGHG++E    P+ V++L+ ++
Sbjct: 384 G-SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR 442

Query: 313 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 494

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E    PR + SL G+R I  + G   T  +
Sbjct: 397 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 456

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G        +G +  +L   P  V +L +    + A G+
Sbjct: 457 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 514

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G+V+T       +LG + + +   P  +   L +  V +I+ G  ++ AL 
Sbjct: 515 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D K P ++E  +  +++ +       AA   H  V
Sbjct: 574 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 630

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECES 300
            G +   C+       +   R+ C   G   C S
Sbjct: 631 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 664


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 35/328 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+   +L  + I Q        ++++  G+V+     S  +             PQ + +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTA 509

Query: 146 LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           L +  V++ A    G  + A L+++  VY++  G+  RLGH       EP  L+  L+  
Sbjct: 510 LDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGK 567

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            ++ +  G  Y  A++   +  A+Y+ G G  G+LGHG+  D   P +I      ++  V
Sbjct: 568 DIIDVECGGTYSAAIS---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
              +   H   +   G+V +WG G YG LG G  +   +P++++ L +VK + V  G   
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +SEDG VY++G GE   LGH            NV  P++V  L+  + +VV +SL  
Sbjct: 685 SVALSEDGHVYTWGKGEGWKLGHPT--------EENVRFPEMVEVLR--DRKVVGVSLGV 734

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQL 410
           S     H  ALT+ G++Y +G  +  Q+
Sbjct: 735 S-----HVLALTDQGEVYGWGKNENKQI 757



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H +A+T    VYS+G+   G+LGHG T  +  P  I++L+G  II    G   +  IS  
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVY 171
           G +Y +G+ ++G   +G     L  +P ++ +L +  +++ A G+F+  T  ++ +G+VY
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCL--TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVY 643

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LG         P  L+  L+N+ +VQ+  G  + +AL+       VY+ G 
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALS---EDGHVYTWGK 699

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G KLGH +  + + P ++E   L + + V V+ G  H   +   G V  WG      +
Sbjct: 700 GEGWKLGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
              +E     P++++AL   K + V  G   +F  ++D +
Sbjct: 758 CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
           G  +S A+++ G +Y++G  + G+LGHGT E+   P  I +L    II+ A G+    T+
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL 634

Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            I+  G+VY++G   +G+    G  G+KL   P+L+E L+N+ +VQ   G  F+  LS +
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGSDGSKL---PRLIEKLQNVKIVQVYCGAQFSVALSED 691

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VYT+  G   +LGH TE N   P  ++  L +  VV ++ G  ++LAL  Q     VY
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPE-MVEVLRDRKVVGVSLGVSHVLALTDQGE---VY 747

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
             G     ++   S    + PRLIE  +
Sbjct: 748 GWGKNENKQICDSSELFVQQPRLIEALK 775



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 39/278 (14%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           PQ  ++L  + + Q    +    +L++ G+V+   + +D +               +  L
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQCPQE-----------MTAL 510

Query: 200 ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
           ++  V++IAA   G  YL AL        VYS G G GG+LGHG  + ++ P LI+  + 
Sbjct: 511 DDKEVIKIAAHPEGKHYL-ALT---KDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKG 566

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
            ++  + V  G  ++A +  +G + TWG G YG LGHG  E    P ++ AL+D   I V
Sbjct: 567 KDI--IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624

Query: 317 ATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
           A G +   T  ++  G VYS+G G+   LG    +DG          P+L+  L+ V  +
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGG-SDGSK-------LPRLIEKLQNV--K 674

Query: 375 VVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 411
           +VQ+      Y  A  + AL+E G +Y +G G+  +LG
Sbjct: 675 IVQV------YCGAQFSVALSEDGHVYTWGKGEGWKLG 706



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   S+A++  G VY++G     +LGH T E    P  +  L+  +++  + G   
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + ++D G+VY +GK+   E +     ++L V  P+L+E+LK   VV    G        
Sbjct: 737 VLALTDQGEVYGWGKN---ENKQICDSSELFVQQPRLIEALKGQKVVGVCCGP------- 786

Query: 166 REGRVYTFSWGND 178
                 +F+W +D
Sbjct: 787 ----AQSFAWTDD 795


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +++ G LGHG+    W P+ I  SL+G+ +   + G   T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  G+++ FG  +FG   +G + T  V  P+ VESL  +  +  + G + TA +   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L    SG  V+++G  + G+LG+  +TD K P L+E  +L +     ++ GA+H A + 
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG+ E   VP +V+AL D    ++A G +YT  +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 158/343 (46%), Gaps = 41/343 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329

Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 200
           L     V   A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G+LE
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGSLE 387

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            + V  ++ G  +   +    S   +++ G G  G LGHG +   ++PR +E   L  L+
Sbjct: 388 GLHVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLR 442

Query: 261 PVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            + V+ G WH A V +             G++ TWG G    LGHG+++    P  V AL
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPAL 502

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     +A G   T  ++  G V++ G      LG N   DG+         P LV   
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED- 552

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           K  +E V +IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 553 KLASEFVEEISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 37/291 (12%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 326

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 252
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  L    V+ G WH A++   GR+ T+G G +G LGHG++E    P+ V++L+ ++
Sbjct: 384 G-SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR 442

Query: 313 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 494

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E    PR + SL G+R I  + G   T  +
Sbjct: 397 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 456

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G        +G +  +L   P  V +L +    + A G+
Sbjct: 457 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 514

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G+V+T       +LG + + +   P  +   L +  V +I+ G  ++ AL 
Sbjct: 515 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D K P ++E  +  +++ +       AA   H  V
Sbjct: 574 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 630

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECES 300
            G +   C+       +   R+ C   G   C S
Sbjct: 631 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 664


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 173/376 (46%), Gaps = 47/376 (12%)

Query: 58  VTSKGVVYSFGS-----NSSGQLGH--GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           + S G VY +G      NSS  LG       +   P+P+ S   + + Q   G     L+
Sbjct: 259 IESLGDVYIWGEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALV 318

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +  G+V+ +G+DS G   +G +  K    P LVESL    V   A G + +  +S  G +
Sbjct: 319 TRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVESLAITNVTFVACGEYHSCAVSSSGDL 376

Query: 171 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +T  WG+       LGH T+ +   P  + G LE + VV +A G  +  ALA   S   +
Sbjct: 377 FT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACG-TWHSALAT--SNGKL 431

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
           +++G G  G LGHG R    +P+   + QLL+  + + VA G WH+A    V+G  G   
Sbjct: 432 FTIGDGRFGVLGHGDRDSVAYPK---EVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNT 488

Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
              R+ TWG G    LGH N+E    P  V A+ +     VA G   T  ++  G V++ 
Sbjct: 489 SAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTM 548

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G      LG N  +DG+         P LV   K V E V +IS   +     H   LT 
Sbjct: 549 GGTAYGQLG-NPNSDGK--------VPILVRG-KLVGEFVEEISCGAN-----HVAVLTS 593

Query: 396 SGKLYAFGAGDKGQLG 411
             +LY +G G  G+LG
Sbjct: 594 RSELYTWGRGANGRLG 609



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AV+S G ++++G  ++ +G LGHGT    W P+ +   L+G++++  A G   +
Sbjct: 363 GEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHS 422

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L +  G+++  G   FG   +G + +  V  P+ V+ L     ++ A G + +A +   
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACGVWHSAAIIEV 480

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                  +   R++T+  G+  RLGH  +   +EP  +    E     Q+A GY   +AL
Sbjct: 481 MGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAE-YNFHQVACGYTMTVAL 539

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  V+++G    G+LG+ + +D K P L+ + +L+      ++ GA H AV+   
Sbjct: 540 TT--SGH-VFTMGGTAYGQLGNPN-SDGKVPILV-RGKLVGEFVEEISCGANHVAVLTSR 594

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             + TWG G  G LGHG+ + +  P +V+AL D    +++ G   T  +
Sbjct: 595 SELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGSTFTSCI 643



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAG 105
           Q   G   ++A+T+ G V++ G  + GQLG+  ++ +  P  +R  L G  + + + GA 
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKV-PILVRGKLVGEFVEEISCGAN 586

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              +++   ++Y +G+ + G   +G   T    SP +VE+LK+  +   + G+ FT+ +
Sbjct: 587 HVAVLTSRSELYTWGRGANGRLGHG--DTDDQKSPTMVEALKDRHIKNISCGSTFTSCI 643


>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 529

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 142/304 (46%), Gaps = 19/304 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 112
           HSIA+T+KG   ++G+    +LGHG++ +E+ PR I  L+   R+   A G G T+ + +
Sbjct: 217 HSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALME 276

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           +G+++A+G  S G    G    +  + S  +    ++IF      G   +  LS +GR Y
Sbjct: 277 SGELFAWGNGSNGRLGLGDTNDRPESCSTSVPVRFRHIFC-----GASHSLGLSWDGRAY 331

Query: 172 TFSWGNDARLGH-HTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           T+   N  + GH HT     ++        E    V  AAG  +   L    SG  VYS 
Sbjct: 332 TWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGG-WEHTLFSTASGR-VYSC 389

Query: 230 GCGLGGK--------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           GCG            LGHG       P LI+  +    + V VA G  H+  V   G+V 
Sbjct: 390 GCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVY 449

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG G  G LGHG+EE    P +V+ +          G   T  ++ D +++S G G+S 
Sbjct: 450 TWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAGCEHTVFLTYDHELWSCGQGDSG 509

Query: 342 SLGH 345
            LGH
Sbjct: 510 RLGH 513



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 24/269 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G GH++A+   G ++++G+ S+G+LG G T +  RP    +   +R      GA  ++ +
Sbjct: 267 GLGHTLALMESGELFAWGNGSNGRLGLGDTND--RPESCSTSVPVRFRHIFCGASHSLGL 324

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 166
           S  G+ Y +GK++ G+  +G    +     Q +ES ++      V  AA G   T   + 
Sbjct: 325 SWDGRAYTWGKNNQGQCGHGHTNDQWTI--QEIESFEDGEEAECVTYAAGGWEHTLFSTA 382

Query: 167 EGRVYTFSWG-NDAR-------LGHHTEPNDVEPHPLLGTLENI--PVVQIAAGYCYLLA 216
            GRVY+   G  D+R       LGH      ++P  L+ +LE+    +V++A G+ + LA
Sbjct: 383 SGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKP-TLIQSLEDAREEIVKVACGWDHSLA 441

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           ++   +   VY+ G G  GKLGHG       P L+   +  +++     AG  H   +  
Sbjct: 442 VS---ASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKD--AKAGCEHTVFLTY 496

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVV 305
           D  + + G G  G LGHG+ +    P  +
Sbjct: 497 DHELWSCGQGDSGRLGHGDSQTRKRPTKI 525



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 16/218 (7%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGA 104
             G  HS+ ++  G  Y++G N+ GQ GHG T ++W  + I S +       +  AA G 
Sbjct: 315 FCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGW 374

Query: 105 GRTMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF--VVQAAI 156
             T+  + +G+VY+ G   KDS       V G         P L++SL++    +V+ A 
Sbjct: 375 EHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVAC 434

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +  +S  G+VYT+  G + +LGH  E +   P  L+ T+E   V    AG  + + 
Sbjct: 435 GWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTP-TLVRTMEGRHVKDAKAGCEHTVF 493

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           L        ++S G G  G+LGHG     K P  I  F
Sbjct: 494 LTYD---HELWSCGQGDSGRLGHGDSQTRKRPTKIGLF 528



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 160/376 (42%), Gaps = 51/376 (13%)

Query: 62  GVVYSFGSNSSGQLGHG-----------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G + SFG    G+LGHG            TE +  P  I + + I   +  + +  ++ I
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLSTHSIAI 221

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGR 169
           +  G   A+G        +G   TK  T P+++E L+    V   A G   T  L   G 
Sbjct: 222 TAKGDAMAWGNGDKYRLGHG-SSTKEYT-PRMIEHLRLKGRVRDLACGLGHTLALMESGE 279

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV--QIAAGYCYLLALACQPSGMAVY 227
           ++ +  G++ RLG      D    P   +  ++PV    I  G  + L L+    G A Y
Sbjct: 280 LFAWGNGSNGRLG----LGDTNDRPESCS-TSVPVRFRHIFCGASHSLGLSWD--GRA-Y 331

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
           + G    G+ GHG   D+   + IE F+     + V  AAG W H       GRV + G 
Sbjct: 332 TWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEHTLFSTASGRVYSCGC 391

Query: 286 G-----RYG---CLGHGNEECESVPKVVQALNDVKA--IHVATGDYTTFVVSEDGDVYSF 335
           G     R G    LGHG+ +    P ++Q+L D +   + VA G   +  VS  G VY++
Sbjct: 392 GYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVYTW 451

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G G +  LGH            +  TP LV +++  + +  +           HT  LT 
Sbjct: 452 GSGTNGKLGHGD--------EESFDTPTLVRTMEGRHVKDAKAGC-------EHTVFLTY 496

Query: 396 SGKLYAFGAGDKGQLG 411
             +L++ G GD G+LG
Sbjct: 497 DHELWSCGQGDSGRLG 512



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 53/94 (56%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           R E  +   G  HS+AV++ G VY++GS ++G+LGHG  E    P  +R+++G  +  A 
Sbjct: 426 REEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAK 485

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           AG   T+ ++   ++++ G+   G   +G   T+
Sbjct: 486 AGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTR 519



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 29/164 (17%)

Query: 272 AVVGQDGRVC----TWGWGRYGCLGHGN-----------EECESVPKVVQALNDVKAIHV 316
             +G++ + C    ++G G +G LGHG             E + VP ++ A  D+    +
Sbjct: 152 TTIGEEDQPCGYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRI 211

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
            +    +  ++  GD  ++G G+   LGH +             TP+++  L+ +  RV 
Sbjct: 212 DSLSTHSIAITAKGDAMAWGNGDKYRLGHGS--------STKEYTPRMIEHLR-LKGRVR 262

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            ++         HT AL ESG+L+A+G G  G+LG+   N++ E
Sbjct: 263 DLACGL-----GHTLALMESGELFAWGNGSNGRLGLGDTNDRPE 301



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAG----------- 267
           QP G  + S G G  GKLGHG      H    E     N L P ++AA            
Sbjct: 159 QPCGY-LMSFGKGDHGKLGHGQCV---HVSCQEGNCTENKLVPTMIAATRDILFRRIDSL 214

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVV 326
           + H+  +   G    WG G    LGHG+   E  P++++ L    +   +A G   T  +
Sbjct: 215 STHSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLAL 274

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
            E G+++++G G +  LG     D           P+  ++        V +   +    
Sbjct: 275 MESGELFAWGNGSNGRLGLGDTND----------RPESCST-------SVPVRFRHIFCG 317

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            +H+  L+  G+ Y +G  ++GQ G    N+Q
Sbjct: 318 ASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQ 349


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 43/384 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++AV   G V++ G N  G+LG+GT  +   P  + +L G+  I  AAG   ++ +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTGV--ISVAAGYYHSLAL 61

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
              G V+A+G +++G    G   T   T P  V +L  +  + A     F   L  +G V
Sbjct: 62  KSDGTVWAWGLNTYGN--LGDNTTTTRTKPVQVLNLTGVIAIAADYYQSF--ALKSDGTV 117

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPSGMA 225
           +++ +  ++ LG+ +      P  +  +   I      VV IAAG  + LAL    +   
Sbjct: 118 WSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGT--- 174

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCTWG 284
           V+S G    G+LG+G+   +         Q +NL   V ++AGA H+  +  +G V +WG
Sbjct: 175 VWSWGLNSSGQLGNGTLATQS-----AAVQAVNLTDAVAISAGAAHSLALRANGAVVSWG 229

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              YG LG+G     + P  V  LN++K++  A G   +  +  DG V ++G      +G
Sbjct: 230 ANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AAGGNHSLALKSDGTVTAWGYNAYGQVG 287

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFG 403
           + A         ANVL+P  V++L  V      +S         H+ A+  S G ++ +G
Sbjct: 288 NGAT--------ANVLSPIAVSTLSGVTAVSAGVS---------HSHAIGSSNGVIWGWG 330

Query: 404 AGDKGQLGIELVNNQTERGNPERV 427
               G LG    N +  R  P  +
Sbjct: 331 LNTYGGLG---NNTKVNRSTPGTI 351



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 36/362 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V S+G+N+ GQLG+GTT     P  +  L  I+ +  AAG   ++ 
Sbjct: 211 AGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AAGGNHSLA 268

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V A+G +++G+   G   T  V SP  V +L  +  V A + +   A+ S  G 
Sbjct: 269 LKSDGTVTAWGYNAYGQVGNGA--TANVLSPIAVSTLSGVTAVSAGVSHSH-AIGSSNGV 325

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           ++ +       LG++T+ N   P  +L T     +  +A G  + + +    +   V++ 
Sbjct: 326 IWGWGLNTYGGLGNNTKVNRSTPGTILLTSG---LQGVAGGAQHTIYVKGDGT---VWAW 379

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G++G G+       R +   QL  L  ++ VAAGA H+  +  +G V  WG   +
Sbjct: 380 GSNTYGQIGDGTPL-----RRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWGRNNH 434

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G+    S+P  V  L  + A+  A G   +  +  DG VY++G      LG    
Sbjct: 435 GQLGDGSTTNRSLPTQVPNLTGIVAL--AAGATHSLALRFDGTVYAWGRNHLGQLGDETC 492

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D         L+P  V  L    E+VV IS  ++     H+ A+ ++G  +A+G+ + G
Sbjct: 493 TD--------RLSPVAVHYL----EKVVAISAGDN-----HSLAIHQNGTAFAWGSDEHG 535

Query: 409 QL 410
           QL
Sbjct: 536 QL 537



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 164/378 (43%), Gaps = 37/378 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ S G V+S+G NSSGQLG+GT   +     ++++     +  +AGA  ++ 
Sbjct: 161 AGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQ--SAAVQAVNLTDAVAISAGAAHSLA 218

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V ++G +++G+   G   T    SP  V  L NI  + AA GN   A L  +G 
Sbjct: 219 LRANGAVVSWGANTYGQLGNGT--TTTSASPVGVSGLNNIKSL-AAGGNHSLA-LKSDGT 274

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  + +    ++G+    N + P   + TL  +  V     + +    A   S   ++  
Sbjct: 275 VTAWGYNAYGQVGNGATANVLSP-IAVSTLSGVTAVSAGVSHSH----AIGSSNGVIWGW 329

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G LG+ ++ +   P  I    LL      VA GA H   V  DG V  WG   YG
Sbjct: 330 GLNTYGGLGNNTKVNRSTPGTI----LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYG 385

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            +G G       P  +  L  +  I VA G   +  ++ +G V+++G      LG  +  
Sbjct: 386 QIGDGTPLRRLTPVQLSTLTGI--IAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTT 443

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
               NR      P L          +V ++   +     H+ AL   G +YA+G    GQ
Sbjct: 444 ----NRSLPTQVPNLT--------GIVALAAGAT-----HSLALRFDGTVYAWGRNHLGQ 486

Query: 410 LGIELVNNQTERGNPERV 427
           LG E     T+R +P  V
Sbjct: 487 LGDETC---TDRLSPVAV 501



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 25/366 (6%)

Query: 47  QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q +AG   H+I V   G V+++GSN+ GQ+G GT      P  + +L GI  I  AAGA 
Sbjct: 358 QGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTGI--IAVAAGAN 415

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ ++  G V+A+G+++ G+   G    + +  P  V +L  I  + A  G   +  L 
Sbjct: 416 HSLALAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVPNLTGIVALAA--GATHSLALR 471

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G VY +   +  +LG  T  + + P  +   LE   VV I+AG  +  +LA   +G A
Sbjct: 472 FDGTVYAWGRNHLGQLGDETCTDRLSPVAVH-YLEK--VVAISAGDNH--SLAIHQNGTA 526

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            ++ G    G+L        +   LI Q   + ++ + +AAGA H  ++  +G     G 
Sbjct: 527 -FAWGSDEHGQLCDSGSGSGRFSPLISQIPGI-VKGIGIAAGANHTLLLEANGTAWACGD 584

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             YG LG G    +S P  +  L +  A  +A G  T+  ++ +G V ++G   S  LG 
Sbjct: 585 NLYGQLGDGTTTDKSAPVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLNSSGQLGD 642

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
           N  A          + P L T    V       SL       AH  A+   G ++++G  
Sbjct: 643 NTTAS------RTTIAPVLRTVYPTVEVFSGVASLGAGT---AHLTAVKTDGYVHSWGLN 693

Query: 406 DKGQLG 411
           D GQ+G
Sbjct: 694 DSGQIG 699



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 35/315 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++G N+ GQLG G+T     P  + +L G  I+  AAGA  ++ 
Sbjct: 412 AGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLA 469

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G VYA+G++  G  + G +      SP  V  L+ +  + A  G+  +  + + G 
Sbjct: 470 LRFDGTVYAWGRNHLG--QLGDETCTDRLSPVAVHYLEKVVAISA--GDNHSLAIHQNGT 525

Query: 170 VYTFSWGNDARLGHHTEPNDVEP-----HPLLGTLENI-PVVQIAAGYCYLLALACQPSG 223
              F+WG+D     H +  D         PL+  +  I   + IAAG  + L L  + +G
Sbjct: 526 A--FAWGSD----EHGQLCDSGSGSGRFSPLISQIPGIVKGIGIAAGANHTLLL--EANG 577

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            A ++ G  L G+LG G+ TD+  P  I            +AAG   +A +  +G V TW
Sbjct: 578 TA-WACGDNLYGQLGDGTTTDKSAPVPITTLT----NAARLAAGGNTSAALTTNGTVSTW 632

Query: 284 GWGRYGCLGHGNEEC--------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           G    G LG               +V   V+  + V ++   T   T   V  DG V+S+
Sbjct: 633 GLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLT--AVKTDGYVHSW 690

Query: 336 GCGESASLGHNAIAD 350
           G  +S  +G   + +
Sbjct: 691 GLNDSGQIGDGTLVN 705


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + S G V S G NS GQLG   T    +P  I +L+ + +   + G   
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + G+   K  T  P+ +++L  I ++Q A G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +G+V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                S   G     G+ +      P  I   + L +  V ++ G  H AV+ QDG+V T
Sbjct: 202 SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           +G   YG LGH     +  P++V+ +  + +      D+T   +   G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 25/298 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I++L GI+IIQ A G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S+ GQV+++G +S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +F WG++     A  G++      +P  + G L+ + VV I+ GY +   L       
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLT---QDG 255

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
            V++ G    G+LGH    +++ P+L+E+ + L  Q   +  G+ H  A +   G+V ++
Sbjct: 256 KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSF 312

Query: 284 GWGRYGCLGHGNE-----ECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYS 334
           G G  GC           E   +  +V A  L DV+  H+  G Y  FV +   D  S
Sbjct: 313 GRGP-GCASRSPHPGALAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQKDTSS 369



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 35/334 (10%)

Query: 84  WR---PRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
           WR   PRP+R  Q    G  ++QAA+G   ++L+   G V + G +S G+   G +GT  
Sbjct: 5   WRAGGPRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
              P+ + +L+ + V   + G   +  +  +GRV+ +   ++ +LG             +
Sbjct: 63  GEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q+A G+ + +AL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G+        P  + AL  + 
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + ++ G   T V+++DG V++FG      LGH+  A+ +G        PQLV   +++ 
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286

Query: 373 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 405
             V QI   +      HT A +  +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 20/222 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    S   V S G    G+LG       + P  I   + L++   +
Sbjct: 25  LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHV--AL 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG    G LG G  +E   +PK ++ L  +K I VA G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +SEDG V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+FAL+ SG  + +G+ + GQL +   N   +R  P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKP 227



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 20/263 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G   + +L  +G V +    +  +LG    P   +P  +   LE + V  ++ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G    G+LG G   +    P+ I+   L  ++ + VA G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +DG+V +WG   +G LG G E   ++ P+ V++L  +    VA G + +F +S 
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G  + +G   +  L  +       N       P  + +LK +   VV IS         
Sbjct: 199 SGTSFGWGSNNAGQLALSG-----NNAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           HT  LT+ GK++ FG    GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSN++GQL   G+    + ++P  I +L+ + ++  + 
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +S+G  + G   T     PQLVE ++ + V Q   G+  T 
Sbjct: 244 GYKHTAVLTQDGKVFTFGDNSYG--QLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYIYTTGQVVSFGRG 315


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 173/395 (43%), Gaps = 42/395 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   GP  +  + S   V+ +G      L  G T +   P  + S   + +   A G   
Sbjct: 217 KTFEGPRAACRLDSLKDVFFWGDAFGSILECGDTSKPL-PMLVDSTNMLDVQSIACGETH 275

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             +I+  G+VY++G +S G    G Q    V+ P++V+SL ++ V   A G+  T  ++ 
Sbjct: 276 AAIITKQGEVYSWGNESSGR--IGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTV 333

Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            G +    WG    +G       N   PH L   L+ I VV+IA G  +   +    S  
Sbjct: 334 SGEL--IEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIIT---SSG 388

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 276
            +Y+ G G  G LGHG       P+ +E  +   ++   VA G WH A + +        
Sbjct: 389 QLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVK--CVACGPWHTAAIVEVISDFKSN 446

Query: 277 --DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
               ++ TWG    G LGH +++ + +P  V +L D   I V+ G   T  +S  G V++
Sbjct: 447 SPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFT 506

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            G      LG         N HA+  T   V  L + +E V  IS  +S     H   +T
Sbjct: 507 SGSSMHGQLG---------NPHADGKTVSAVEGLLK-SEFVRHISSGSS-----HVAVVT 551

Query: 395 ESGKLYAFGAGDKGQLGI-ELVNNQTERGNPERVD 428
            +GK++ +G G +GQLG+ + +N    R  P  VD
Sbjct: 552 TNGKVFTWGKGKEGQLGLGDFLN----RSTPTLVD 582



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 76/328 (23%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-------------- 91
           Q+IA G  H+  +T +G VYS+G+ SSG++G+    +  RP+ ++S              
Sbjct: 267 QSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSK 326

Query: 92  ---------------------------------------LQGIRIIQAAAGAGRTMLISD 112
                                                  L GI +++ A G   T +I+ 
Sbjct: 327 HTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITS 386

Query: 113 AGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
           +GQ+Y +G  +FG   +G  QGT   T P+ VESLK   V   A G + TA +       
Sbjct: 387 SGQLYTYGDGTFGVLGHGDTQGT---TRPKEVESLKGSRVKCVACGPWHTAAIVEVISDF 443

Query: 165 -SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            S   R   F+WG+  R  LGH  +   + P   + +L +   +Q++ G    +AL+   
Sbjct: 444 KSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLTDYDFIQVSCGTALTVALSV-- 500

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           +G+ V++ G  + G+LG+    D K    +E   LL  + V  +++G+ H AVV  +G+V
Sbjct: 501 TGV-VFTSGSSMHGQLGN-PHADGKTVSAVE--GLLKSEFVRHISSGSSHVAVVTTNGKV 556

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQAL 308
            TWG G+ G LG G+    S P +V AL
Sbjct: 557 FTWGKGKEGQLGLGDFLNRSTPTLVDAL 584



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 36/313 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +Y++G  + G LGHG T+   RP+ + SL+G R+   A G   T  I
Sbjct: 377 GPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAI 436

Query: 111 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                     S   +++ +G    G+  +  +  KL+  P  V+SL +   +Q + G   
Sbjct: 437 VEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLI--PTCVDSLTDYDFIQVSCGTAL 494

Query: 161 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           T  LS  G V+T       +LG+ H +   V    + G L++  V  I++G  ++  +  
Sbjct: 495 TVALSVTGVVFTSGSSMHGQLGNPHADGKTVS--AVEGLLKSEFVRHISSGSSHVAVVT- 551

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVV 274
             +   V++ G G  G+LG G   +   P L++  +  +++ +       AA   H  + 
Sbjct: 552 --TNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKVIS 609

Query: 275 GQDGRVCT-----WGWGR--YGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 322
            +D  VC+     +G+ R  + C   G+  C S     V K   A +  +   V  G ++
Sbjct: 610 RKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVAKAALAPDKSRRYRVCDGCFS 669

Query: 323 TFV-VSEDGDVYS 334
             + V + G V S
Sbjct: 670 QLLKVVDSGKVKS 682


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +++ G LGHG+    W P+ I  SL+G+ +   + G   T
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  G+++ FG  +FG   +G + T  V  P+ VESL  +  +  + G + TA +   
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 464

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   +
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 523

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L    SG  V+++G  + G+LG+  +TD K P L+E  +L +     ++ GA+H A + 
Sbjct: 524 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 578

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG+ E   VP +V+AL D    ++A G +YT  +
Sbjct: 579 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 629



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 41/343 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVES
Sbjct: 277 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 334

Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 200
           L     V   A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G+LE
Sbjct: 335 LTATSSVDFVACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGSLE 392

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            + V  ++ G  +   +    S   +++ G G  G LGHG +   ++PR +E   L  L+
Sbjct: 393 GLHVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLR 447

Query: 261 PVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            + V+ G WH A V +             G++ TWG G    LGHG+++    P  V AL
Sbjct: 448 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPAL 507

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     +A G   T  ++  G V++ G      LG N   DG+         P LV   
Sbjct: 508 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED- 557

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           K  +E V +IS         H  ALT   ++Y +G G  G+LG
Sbjct: 558 KLASEFVEEISCG-----AYHVAALTSRNEVYTWGKGANGRLG 595



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 144/312 (46%), Gaps = 41/312 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 274 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 331

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 252
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 332 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 388

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  L    V+ G WH A++   GR+ T+G G +G LGHG++E    P+ V++L+ ++
Sbjct: 389 G-SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR 447

Query: 313 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 448 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 499

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG    N QT+
Sbjct: 500 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG----NLQTD 548

Query: 421 RGNPERVDIDLS 432
              P  V+  L+
Sbjct: 549 GKLPCLVEDKLA 560



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  +TS G +++FG  + G LGHG  E    PR + SL G+R I  + G   T  +
Sbjct: 402 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 461

Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +            +G+++ +G        +G +  +L   P  V +L +    + A G+
Sbjct: 462 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 519

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G+V+T       +LG + + +   P  +   L +  V +I+ G  ++ AL 
Sbjct: 520 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 578

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D K P ++E  +  +++ +       AA   H  V
Sbjct: 579 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 635

Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECES 300
            G +   C+       +   R+ C   G   C S
Sbjct: 636 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 669


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + S G V S G NS GQLG   T    +P  I +L+ + +   + G   
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + G+   K  T  P+ +++L  I ++Q A G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +G+V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                S   G     G+ +      P  I   + L +  V ++ G  H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           +G   YG LGH     +  P++V+ +  + +      D+T   +   G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I++L GI+IIQ A G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S+ GQV+++G +S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L  +  P        +G L+ + VV I+ GY +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LGH    +++ P+L+E+ + L  Q   +  G+ H  A +   G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313

Query: 285 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 325
            G  GC     H   E   +  +V A  L DV+  H+  G Y  FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)

Query: 84  WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
           WR    RP+R  Q    G  ++QAA+G   ++L+   G V + G +S G+   G +GT  
Sbjct: 5   WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
              P+ + +L+ + V   + G   +  +  +GRV+ +   ++ +LG             +
Sbjct: 63  GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q+A G+ + +AL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G+        P  + AL  + 
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + ++ G   T V+++DG V++FG      LGH+  A+ +G        PQLV   +++ 
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286

Query: 373 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 405
             V QI   +      HT A +  +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    S   V S G    G+LG       + P  I   + LN+   +
Sbjct: 25  LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNV--AL 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG    G LG G  +E   +PK ++ L  +K I VA G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +SEDG V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+FAL+ SG  + +G+   GQL +   N   +R  P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKP 227



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 20/263 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G   + +L  +G V +    +  +LG    P   +P  +   LE + V  ++ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G    G+LG G   +    P+ I+   L  ++ + VA G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +DG+V +WG   +G LG G E   ++ P+ V++L  +    VA G + +F +S 
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++    N       P  + +LK +   VV IS         
Sbjct: 199 SGT--SFGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           HT  LT+ GK++ FG    GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 172/359 (47%), Gaps = 40/359 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G+ S GQLG G  E+E    P  I       + Q A G   T+ ++ +G+VYA G 
Sbjct: 3   LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGS 62

Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
           +     +Y   G +L T  P  +  L++  + Q A G+  +  L+  G+V   SWG++  
Sbjct: 63  N-----DYSQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQV--LSWGDNEC 115

Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH ++ + ++   ++  L +  VVQIA G  + LAL C      +YS G  + G+LG
Sbjct: 116 GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC---CGELYSWGSNIYGQLG 172

Query: 239 HGSRTDE---KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGH 293
             S ++     +P  +    LL +    +A G  H  ++ +   V  +GWGR  C  LG 
Sbjct: 173 VKSPSELSQCNYPMRLTT--LLGIPAAAIACGGNHTFLISKSSAV--FGWGRNNCGQLGL 228

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            +E   + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH        
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF------ 282

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
              +N + P++V  L  +   + Q++  N      HT AL  S G++Y FG G  GQLG
Sbjct: 283 --SSNEMLPRMVMEL--MGSTISQVACGNR-----HTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 154/307 (50%), Gaps = 21/307 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H++ +T+ G VY+ GSN   QLGH    +  RP  I  L+   I Q A G+ 
Sbjct: 39  NQVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELEDYVITQIACGSR 96

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +++ GQV ++G +  G+  +      ++  P++V  L +  VVQ A GN  +  L+
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHA-SDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT 155

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEP--HPL-LGTLENIPVVQIAAG--YCYLLALA 218
             G +Y  SWG++   +LG  + P+++    +P+ L TL  IP   IA G  + +L++  
Sbjct: 156 CCGELY--SWGSNIYGQLGVKS-PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLIS-- 210

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                 AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G
Sbjct: 211 ---KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEG 265

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
            V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G +Y FG 
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325

Query: 338 GESASLG 344
           G S  LG
Sbjct: 326 GSSGQLG 332



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 13/265 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A+T  G V S+G N  GQLGH + ++  + P+ +R L    ++Q A G 
Sbjct: 89  TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGN 148

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFT 161
             ++ ++  G++Y++G + +G+   GV+    ++    P  + +L  I     A G   T
Sbjct: 149 NHSLALTCCGELYSWGSNIYGQL--GVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHT 206

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            ++S+   V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  + 
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG 265

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
               V++ G G  G+LGHG  ++E  PR++   +L+      VA G  H  A+V   GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSRGRI 320

Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
             +G G  G LG  N +  ++P+VV
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQVV 345



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 24/208 (11%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGR 279
           M +Y  G    G+LG G   DE+    I     +  +P      VA G  H   +   G+
Sbjct: 1   MELYCWGNASHGQLGLGGIEDEQ----ILTPSQIPWKPDSAVNQVACGHRHTLFLTASGK 56

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   Y  LGH  E     P  +  L D     +A G   +  ++E G V S+G  E
Sbjct: 57  VYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNE 114

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH +  D        +  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 115 CGQLGHASDQDV-------IQLPKIVRYL--VSKTVVQIACGNN-----HSLALTCCGEL 160

Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERV 427
           Y++G+   GQLG++  +  ++   P R+
Sbjct: 161 YSWGSNIYGQLGVKSPSELSQCNYPMRL 188



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  H+  ++    V+ +G N+ GQLG         P  +++L+ + +   A G   
Sbjct: 198 AIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 257

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           ++ +++ G V+  G  ++G+  +G    +++  P++V  L    + Q A GN  T A++ 
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTISQVACGNRHTLALVP 315

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y F  G+  +LG     +   P  ++G
Sbjct: 316 SRGRIYGFGLGSSGQLGTRNTKSLNLPQVVIG 347


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 154/342 (45%), Gaps = 40/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+V+++G++  G   +GV     V  P+LV+ 
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VLHPKLVDG 353

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           LKN  V   A G + +  ++  G +YT  WG    N   LG+  E ++  P  L G LE 
Sbjct: 354 LKNTNVELVACGEYHSCAVTLSGDLYT--WGGSSHNCGLLGYRNEASNWVPKKLNGPLEG 411

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  ++ G  +   +    S   +++ G G  G LGHG R     PR +E  +   L+ 
Sbjct: 412 IHVAAVSCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLK--GLRT 466

Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 467 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALV 526

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +     VA G   T  ++  G VY+ G      LG N  ADG+         P  V    
Sbjct: 527 EPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLG-NPQADGK--------LPVRVEG-- 575

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           ++++  V+  L    Y   H   LT   ++Y +G G  G+LG
Sbjct: 576 KLSKNFVE-ELDCGAY---HVAVLTSRTEVYTWGKGANGRLG 613



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 147/291 (50%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AVT  G +Y++G  S++ G LG+      W P+ +   L+GI +   + G   T
Sbjct: 365 GEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHT 424

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ +GQ++ FG  +FG   +G +  + V++P+ VESLK +  V+AA G + TA +   
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEV 482

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  + + + P  +   +E     Q+A G+   +
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHSMTV 541

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   VY++G  + G+LG+  + D K P  +E     N    +   GA+H AV+ 
Sbjct: 542 ALT---TTGHVYTMGSPVYGQLGN-PQADGKLPVRVEGKLSKNFVEEL-DCGAYHVAVLT 596

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  S P +V+AL D +   V  G   T  +
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 48/312 (15%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
           P+ +ES   + V   A G    A+++++G V  FSWG +   RLGH  + + + P  L+ 
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEV--FSWGEELGGRLGHGVDSDVLHPK-LVD 352

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVG-----CGLGGKLGHGSRTDEKHPRLIE 252
            L+N  V  +A G  +  A+    SG  +Y+ G     CGL   LG+ +      P+ + 
Sbjct: 353 GLKNTNVELVACGEYHSCAVTL--SG-DLYTWGGSSHNCGL---LGYRNEASNWVPKKLN 406

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  +    V+ G WH AVV   G++ T+G G +G LGHG+    S P+ V++L  ++
Sbjct: 407 G-PLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLR 465

Query: 313 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            +  A G + T  V E             G ++++G G+   LGH       G++ +  L
Sbjct: 466 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKESR-L 517

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P  V +L + N    Q++  +S+     T ALT +G +Y  G+   GQLG    N Q +
Sbjct: 518 VPTCVAALVEPN--FCQVACGHSM-----TVALTTTGHVYTMGSPVYGQLG----NPQAD 566

Query: 421 RGNPERVDIDLS 432
              P RV+  LS
Sbjct: 567 GKLPVRVEGKLS 578



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 23/249 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG       PR + SL+G+R ++AA G   T  +
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAV 479

Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
            +             G+++ +G    G   +G + ++LV  P  V +L      Q A G+
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGH 537

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+  G VYT       +LG + + +   P  + G L    V ++  G  ++  L 
Sbjct: 538 SMTVALTTTGHVYTMGSPVYGQLG-NPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLT 596

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
              S   VY+ G G  G+LGHG   D   P ++E  +   ++ VV      AA   H  V
Sbjct: 597 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAICLHKWV 653

Query: 274 VGQDGRVCT 282
            G D  +C+
Sbjct: 654 SGIDQSMCS 662


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 170/369 (46%), Gaps = 37/369 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   S+AV S G V+++G N  GQLG GT      P  ++ L G+  +  A GA  ++ 
Sbjct: 101 SGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGLSGVTTV--ALGATHSLA 158

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G+   G    +   +PQ+V  L+ +  V AA  N   AVLS +G 
Sbjct: 159 LCYDGSVWAWGANDHGQLGDGTSIAR--RTPQMVAGLQEVVAV-AAGANHSLAVLS-DGT 214

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +    D +LG  T      P P+ G L  I  V +A+G  + LAL    +   V++ 
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRVPVPIQG-LSGI--VAVASGTSHSLALRYDGN---VWAW 268

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG GS      P  + +   +    V V  G  ++  V  DG V TWG   YG
Sbjct: 269 GSNYSGQLGDGSSLSRSSPVQVTELSGI----VSVEGGPDYSMAVRYDGTVWTWGINTYG 324

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G     SVP     L+ V A  VA G      +  +  ++++G   +   G  +  
Sbjct: 325 QLGDGTTIARSVPVQTSGLSGVVA--VAAGRTHALAMRANNSIWAWGGNVNGQRGDES-- 380

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
                  +   +P+ +     +NE VV ++ TN      H+ A+   G L+A+GA ++GQ
Sbjct: 381 ------RSVYFSPRTI-----LNE-VVTMAATND-----HSLAVRSDGGLWAWGANNEGQ 423

Query: 410 LGIELVNNQ 418
           LG     N+
Sbjct: 424 LGDGTTKNR 432



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 31/364 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV S G ++++G+N+ GQLG GTT+  W P  +       ++  AAG   ++ + D 
Sbjct: 403 HSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLG----NVVSVAAGRRHSLAVRDD 458

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G ++A+G ++ G+   G   ++ +  P  V  +  I  V A  G+ ++  L  +  ++ +
Sbjct: 459 GSLWAWGSNTVGQLGDGTGSSRTI--PMQVPGISGIASVAA--GSDYSVALRYDRTLWAW 514

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              +  +LG  T  N   P  + G L  I  V IA G  ++LA+    +   V++ G   
Sbjct: 515 GENSYGQLGDGTTVNRHVPTRVQG-LSGI--VAIATGNGHMLAVRSNGT---VWAWGDNS 568

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG G+  +   P    Q Q+L+    V A  A H+  V  DG +  WG      LG 
Sbjct: 569 SGQLGDGTTINRATP---VQVQVLSGIVAVAAGAA-HSLAVRYDGTLWAWGINNTSQLGD 624

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G      VP  VQ +    A+ V+   + +  V  DG ++ +G      LG N     Q 
Sbjct: 625 GTGIPRLVPTQVQGIG--SAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRN-----QD 677

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
           N +    TP  VT+L  V E V     +       H+ AL   G L  +G    GQLG  
Sbjct: 678 NTNP---TPSKVTTLTGVTEAVGTFGYSIGF---GHSLALRSDGYLVGWGHNTYGQLGTG 731

Query: 414 LVNN 417
           +  N
Sbjct: 732 VPEN 735



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 44/379 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V+++G N  GQLG GTT     P PI+ L G  I+  A+G   ++ 
Sbjct: 201 AGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLSG--IVAVASGTSHSLA 258

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G+   G   ++  +SP  V  L  I  V+   G  ++  +  +G 
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDGSSLSR--SSPVQVTELSGIVSVEG--GPDYSMAVRYDGT 314

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+T+      +LG  T      P    G      VV +AAG  + LA+    S   +++ 
Sbjct: 315 VWTWGINTYGQLGDGTTIARSVPVQTSGLSG---VVAVAAGRTHALAMRANNS---IWAW 368

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G  + G+ G  SR+    PR I     LN + V +AA   H+  V  DG +  WG    G
Sbjct: 369 GGNVNGQRGDESRSVYFSPRTI-----LN-EVVTMAATNDHSLAVRSDGGLWAWGANNEG 422

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G  +    P  V  L +V  + VA G   +  V +DG ++++G      LG     
Sbjct: 423 QLGDGTTKNRWAPAEV--LGNV--VSVAAGRRHSLAVRDDGSLWAWGSNTVGQLG----- 473

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKG 408
           DG G             S + +  +V  IS   S+   + ++ AL     L+A+G    G
Sbjct: 474 DGTG-------------SSRTIPMQVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYG 520

Query: 409 QLGIELVNNQTERGNPERV 427
           QLG     N   R  P RV
Sbjct: 521 QLGDGTTVN---RHVPTRV 536



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 18/257 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+     ++++G NS GQLG GTT     P  ++ L GI  I  A G G  + 
Sbjct: 497 AGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQGLSGIVAI--ATGNGHMLA 554

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G    +   +P  V+ L  I  V A   +     +  +G 
Sbjct: 555 VRSNGTVWAWGDNSSGQLGDGTTINR--ATPVQVQVLSGIVAVAAGAAHSL--AVRYDGT 610

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           ++ +   N ++LG  T    + P  + G       V ++A   + LA+    +   ++  
Sbjct: 611 LWAWGINNTSQLGDGTGIPRLVPTQVQGIGS---AVAVSAAKHHSLAVLADGT---LWDW 664

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGW 285
           G    G+LG     D  +P   +   L  +   V     + G  H+  +  DG +  WG 
Sbjct: 665 GANNYGQLGR--NQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGH 722

Query: 286 GRYGCLGHGNEECESVP 302
             YG LG G  E   VP
Sbjct: 723 NTYGQLGTGVPENIPVP 739



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 10/174 (5%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G GH +AV S G V+++G NSSGQLG GTT     P  ++ L    I+  AAGA  
Sbjct: 544 AIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLS--GIVAVAAGAAH 601

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G ++A+G ++  +   G    +LV  P  V+ + +   V AA  +   AVL+ 
Sbjct: 602 SLAVRYDGTLWAWGINNTSQLGDGTGIPRLV--PTQVQGIGSAVAVSAAKHHSL-AVLA- 657

Query: 167 EGRVYTFSWGNDARLGH---HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +G ++ +   N  +LG    +T P   +   L G  E +     + G+ + LAL
Sbjct: 658 DGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLAL 711


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 157/341 (46%), Gaps = 40/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q   G     L++  G+V+ +G+DS G   +G +  K    P LVES
Sbjct: 252 PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVES 309

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G + +  +S  G ++T  WG+       LGH T+ +   P  + G LE 
Sbjct: 310 LAITNVTFVACGEYHSCAVSTSGDLFT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG 367

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
           + VV +A G  +  ALA   S   +++ G G  G LGHG+R    +P+   + QLL+  +
Sbjct: 368 LQVVAVACG-TWHSALAT--SNGKLFTFGDGRFGVLGHGNRASVAYPK---EVQLLSGYK 421

Query: 261 PVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            + VA G WH+A +              R+ TWG G    LGH N+E    P  V A+ +
Sbjct: 422 AIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE 481

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                VA G   T  ++  G V+S G      LG N  +DG+         P LV   K 
Sbjct: 482 YNFHQVACGYTMTVALTASGHVFSMGGTTYGQLG-NPNSDGK--------VPILVRD-KL 531

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V E V +IS   +     H   LT   +LY +G G  G+LG
Sbjct: 532 VGEFVEEISCGAN-----HVAVLTSRSELYTWGRGANGRLG 567



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 149/312 (47%), Gaps = 35/312 (11%)

Query: 114 GQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           G+V+A G   D  G        T ++T P+ +ES   + V Q   G+   A+++R+G V+
Sbjct: 225 GEVWADGNSFDGLGSQLQAFCKTDVLT-PKPLESDVVLDVHQIGPGDRHIALVTRQGEVF 283

Query: 172 TFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           T  WG D+  RLGH  E +   PH L+ +L    V  +A G  +  A++     +  +  
Sbjct: 284 T--WGEDSGGRLGHGFEKDFGRPH-LVESLAITNVTFVACGEYHSCAVSTS-GDLFTWGD 339

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G LGHG+      P+ +    L  LQ V VA G WH+A+   +G++ T+G GR+G
Sbjct: 340 GTHGAGLLGHGTDVSYWIPKRVSG-PLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFG 398

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD----------VYSFGCGE 339
            LGHGN    + PK VQ L+  KAI VA G + +  + +  D          ++++G G+
Sbjct: 399 VLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGD 458

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH        N+    L P  V ++ + N   V    T        T ALT SG +
Sbjct: 459 QYRLGH-------ANKET-YLEPTCVAAVAEYNFHQVACGYT-------MTVALTASGHV 503

Query: 400 YAFGAGDKGQLG 411
           ++ G    GQLG
Sbjct: 504 FSMGGTTYGQLG 515



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AV++ G ++++G  ++ +G LGHGT    W P+ +   L+G++++  A G   +
Sbjct: 321 GEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHS 380

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L +  G+++ FG   FG   +G + +  V  P+ V+ L     ++ A G + +A +   
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACGVWHSAAIIDV 438

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                  +   R++T+  G+  RLGH  +   +EP  +    E     Q+A GY   +AL
Sbjct: 439 MDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE-YNFHQVACGYTMTVAL 497

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  V+S+G    G+LG+ + +D K P L+   +L+      ++ GA H AV+   
Sbjct: 498 TA--SGH-VFSMGGTTYGQLGNPN-SDGKVPILVRD-KLVGEFVEEISCGANHVAVLTSR 552

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             + TWG G  G LGHG+ + +  P +V+AL D    +++ G   T  +
Sbjct: 553 SELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGSTFTSCI 601



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           Q   G   ++A+T+ G V+S G  + GQLG+  ++ +  P  +R  L G  + + + GA 
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGK-VPILVRDKLVGEFVEEISCGAN 544

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              +++   ++Y +G+ + G   +G    K   SP LVE+LK+  V   + G+ FT+ +
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDK--KSPTLVEALKDRHVKNISCGSTFTSCI 601


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)

Query: 32  RFLLAGEACCRRE---NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
            ++L+ E     E   N +++A G  H++AVT  G +Y+ GSN  GQLGH     + +  
Sbjct: 39  NYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKI 98

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLV 143
           P   ++ + +   A G   +M +++ GQ+Y +G DS G    E + G+Q       P++V
Sbjct: 99  P--GVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQ-----YKPKIV 151

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 201
           ++L ++ +VQ + G      L+  G +YT  WG++   +LG    P +V    L+ +L  
Sbjct: 152 KTLASMLLVQISCGYKHCMALTNHGELYT--WGSNEFGQLGLGLGPGNVSKPTLVNSLVG 209

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +P+  IA G  +  +     SG AV+  G    G+LG  S+T    P  ++  + + ++ 
Sbjct: 210 LPISFIACGGYH--SFVVSKSG-AVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVK- 265

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 320
             +A G   +  +  DG V T G G YG LGHG+   E VP+ V  L       V  G  
Sbjct: 266 -YIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 324

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV---------TSLKQV 371
           +T  +V   G VYSFG G    LG  +          N  TPQLV         TS+ + 
Sbjct: 325 HTLTLVPSKGRVYSFGLGSVGQLGTKS--------SINSNTPQLVLGPWLSPSGTSMIET 376

Query: 372 NERVVQISL 380
           N++ V  S+
Sbjct: 377 NKQYVVKSI 385



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 33/355 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFG 120
           +Y +G+  +G+LG G  EE +   P  I + + +  I++ A G   T+ +++ GQ+YA G
Sbjct: 20  MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
            + FG+  +    TKL    Q +  ++++ +   A G   +  L+  G++YT  WG+D+ 
Sbjct: 80  SNDFGQLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSC 133

Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKL 237
            +LG  T+        ++ TL ++ +VQI+ GY + +AL        +Y+ G    G   
Sbjct: 134 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLG 190

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
                 +   P L+    L+ L    +A G +H+ VV + G V  WG   +G LG  ++ 
Sbjct: 191 LGLGPGNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQT 248

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             S P  ++ +  VK  ++A G+  +  ++ DG V++ G G    LGH +         +
Sbjct: 249 SLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF--------S 300

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           N + P+ V  L+ +   V Q++         HT  L  S G++Y+FG G  GQLG
Sbjct: 301 NEIVPRKV--LELMGSTVTQVTCGRR-----HTLTLVPSKGRVYSFGLGSVGQLG 348


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 172/398 (43%), Gaps = 53/398 (13%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGS-----NSSGQLGHGTTE--EEWRPRPIRSLQGIRII 98
           S  ++GP     + S G V+ +G      NSS  LG       +   P+P+ S   + + 
Sbjct: 210 SSVVSGPDD---IESLGDVFIWGEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVN 266

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
               G     L++  G+++ +G+DS G   +G    K    P+LV+SL    V   A G 
Sbjct: 267 YIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFD--KDYGKPRLVDSLAITSVSFVACGE 324

Query: 159 FFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           + T  +S  G +YT  WG    N   LGH T+ +   P  + G LE   VV IA G  + 
Sbjct: 325 YHTCAVSISGDLYT--WGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHT 382

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAV 273
             +    S   +++ G G  G LGHG R    +P+   + QLL+  + V VA G WH A 
Sbjct: 383 ALIT---SNGKLFTFGDGTLGVLGHGDRESVAYPK---ELQLLSGHKAVKVACGVWHTAA 436

Query: 274 VGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
           + +               ++ TWG G    LGH N+E    P  V AL D   + VA G 
Sbjct: 437 IIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGH 496

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             T  ++  G V++ G      LG N  +DG+         P LV    Q  E V +IS 
Sbjct: 497 SLTVALTASGHVFTMGSKAYGQLG-NPTSDGK--------VPILVRDKLQ-GETVEEISC 546

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
                   H   LT   +LY +G G  G+LG   + +Q
Sbjct: 547 GTH-----HVAVLTSRSELYTWGRGANGRLGHGDIEDQ 579



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 25/292 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AV+  G +Y++G  ++++G LGHGT      P+ +   L+G +++  A GA  T
Sbjct: 323 GEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHT 382

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  G+++ FG  + G   +G + +  V  P+ ++ L     V+ A G + TA +   
Sbjct: 383 ALITSNGKLFTFGDGTLGVLGHGDRES--VAYPKELQLLSGHKAVKVACGVWHTAAIIEV 440

Query: 165 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
                     S   +++T+  G+  RLGH  +   ++P   +  L +   +Q+A G+   
Sbjct: 441 NDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQP-TCVAALADYNFLQVACGHSLT 499

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL    SG  V+++G    G+LG+ + +D K P L+   +L       ++ G  H AV+
Sbjct: 500 VALTA--SGH-VFTMGSKAYGQLGNPT-SDGKVPILVRD-KLQGETVEEISCGTHHVAVL 554

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
                + TWG G  G LGHG+ E +  P +V+AL +    ++A G ++TT +
Sbjct: 555 TSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCI 606


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 165/356 (46%), Gaps = 28/356 (7%)

Query: 67  FGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G+ S GQLG G  +EE    PR      G R+     G   T  + + G VY  G +  
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +     K    P+ V +L    +V  + G   T  L+ +G+V+++  G+D +LG +
Sbjct: 64  GQLGH----EKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
                +     + +L ++ V Q+A GY + LAL+    G  ++S G    G+LG G    
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALS---KGGHIFSWGQNRYGQLGLGMTGQ 176

Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
               P+ ++  Q   +    +AAG  H+  +   G V  WG  ++G LG  +      P 
Sbjct: 177 SISVPQHLQSLQ--GIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPA 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           +++AL   + I+++ G+  T  ++++G V++FG G    LGHN+      N   N   P+
Sbjct: 235 LLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PR 286

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 418
            V  L  +   V QI+         HT A T  SGK+ +FG G  GQLG     N+
Sbjct: 287 KVFEL--MGNVVTQIACGRQ-----HTLAFTPSSGKMDSFGLGGNGQLGTRSTCNR 335



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 17/299 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  +   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQIIVALSCGESHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +D GQV+++G  S G+        + +  P+ ++SL ++ V Q A G + +  LS+ G +
Sbjct: 100 NDKGQVFSWGLGSDGQLGLN-NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHI 158

Query: 171 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             FSWG +      LG   +   V  H  L +L+ IP  QIAAG  +  AL    SG AV
Sbjct: 159 --FSWGQNRYGQLGLGMTGQSISVPQH--LQSLQGIPFAQIAAGGAHSFALTL--SG-AV 211

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G+LG     D   P L++   L + + + ++ G  H A + ++G V T+G G
Sbjct: 212 FGWGRNKFGQLGLNDTNDRCFPALLK--ALRSQRVIYISCGEDHTAALTKEGGVFTFGAG 269

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
            YG LGH +   E  P+ V  L       +A G  +T       G + SFG G +  LG
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 113/204 (55%), Gaps = 6/204 (2%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A++  G ++S+G N  GQLG G T +    P+ ++SLQGI   Q AAG 
Sbjct: 140 AQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGG 199

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +  ++ +G V+ +G++ FG  + G+  T     P L+++L++  V+  + G   TA L
Sbjct: 200 AHSFALTLSGAVFGWGRNKFG--QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAAL 257

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           ++EG V+TF  G   +LGH++  ++V P  +   + N+ V QIA G  + LA    PS  
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV-VTQIACGRQHTLAFT--PSSG 314

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHP 248
            + S G G  G+LG  S  + K P
Sbjct: 315 KMDSFGLGGNGQLGTRSTCNRKSP 338



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A+T  G V+ +G N  GQLG   T +   P  +++L+  R+I  + G  
Sbjct: 193 AQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGED 252

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T  ++  G V+ FG   +G  + G   T    +P+ V  L    V Q A G   T A  
Sbjct: 253 HTAALTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFT 310

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G++ +F  G + +LG  +  N   P P+ G
Sbjct: 311 PSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKG 343


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + S G V S G NS GQLG   T    +P  I +L+ + +   + G   
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + G+   K  T  P+ +++L  I ++Q A G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +G+V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                S   G     G+ +      P  I   + L +  V ++ G  H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           +G   YG LGH     +  P++V+ +  + +      D+T   +   G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I++L GI+IIQ A G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S+ GQV+++G +S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L  +  P        +G L+ + VV I+ GY +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LGH    +++ P+L+E+ + L  Q   +  G+ H  A +   G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313

Query: 285 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 325
            G  GC     H   E   +  +V A  L DV+  H+  G Y  FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)

Query: 84  WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
           WR    RP+R  Q    G  ++QAA+G   ++L+   G V + G +S G+   G +GT  
Sbjct: 5   WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
              P+ + +L+ + V   + G   +  +  +GRV+ +   ++ +LG             +
Sbjct: 63  GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q+A G+ + +AL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G+        P  + AL  + 
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + ++ G   T V+++DG V++FG      LGH+  A+ +G        PQLV   +++ 
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286

Query: 373 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 405
             V QI   +      HT A +  +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    S   V S G    G+LG       + P  I   + LN+   +
Sbjct: 25  LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNV--AL 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG    G LG G  +E   +PK ++ L  +K I VA G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +SEDG V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+FAL+ SG  + +G+   GQL +   N   +R  P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKP 227



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 20/263 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G   + +L  +G V +    +  +LG    P   +P  +   LE + V  ++ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G    G+LG G   +    P+ I+   L  ++ + VA G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +DG+V +WG   +G LG G E   ++ P+ V++L  +    VA G + +F +S 
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++    N       P  + +LK +   VV IS         
Sbjct: 199 SGT--SFGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           HT  LT+ GK++ FG    GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + S G V S G NS GQLG   T    +P  I +L+ + +   + G   
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + G+   K  T  P+ +++L  I ++Q A G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +G+V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                S   G     G+ +      P  I   + L +  V ++ G  H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           +G   YG LGH     +  P++V+ +  + +      D+T   +   G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I++L GI+IIQ A G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S+ GQV+++G +S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L  +  P        +G L+ + VV I+ GY +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LGH    +++ P+L+E+ + L  Q   +  G+ H  A +   G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313

Query: 285 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 325
            G  GC     H   E   +  +V A  L DV+  H+  G Y  FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)

Query: 84  WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
           WR    RP+R  Q    G  ++QAA+G   ++L+   G V + G +S G+   G +GT  
Sbjct: 5   WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
              P+ + +L+ + V   + G   +  +  +GRV+ +   ++ +LG             +
Sbjct: 63  GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q+A G+ + +AL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G+        P  + AL  + 
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + ++ G   T V+++DG V++FG      LGH+  A+ +G        PQLV   +++ 
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286

Query: 373 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 405
             V QI   +      HT A +  +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    S   V S G    G+LG       + P  I   + LN+   +
Sbjct: 25  LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNV--AL 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG    G LG G  +E   +PK ++ L  +K I VA G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +SEDG V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+FAL+ SG  + +G+   GQL +   N   +R  P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKP 227



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 20/263 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G   + +L  +G V +    +  +LG    P   +P  +   LE + V  ++ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G    G+LG G   +    P+ I+   L  ++ + VA G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +DG+V +WG   +G LG G E   ++ P+ V++L  +    VA G + +F +S 
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++    N       P  + +LK +   VV IS         
Sbjct: 199 SGT--SFGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           HT  LT+ GK++ FG    GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 160/342 (46%), Gaps = 42/342 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G     L++  G+V+ +G++S G   +G +     + P+LVE 
Sbjct: 256 PKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETD--FSCPRLVEF 313

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G + T  ++  G +YT  WG+  R    LG  T+ +   P  + G LE 
Sbjct: 314 LAVTNVDFVACGEYHTCAVTTSGDLYT--WGDGTRNAGLLGQGTDVSHWIPKRVSGPLEG 371

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
           + V  IA G  +  ALA   S   +++ G G  G LGHG R     P+   + QLL+ L+
Sbjct: 372 LQVFSIACG-TWHSALAT--SNGKLFTFGDGAFGVLGHGDRESLSFPK---EVQLLSGLK 425

Query: 261 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            + VA G WH A    V+ Q G      ++ TWG G    LGHG+++   +P  V +L D
Sbjct: 426 TIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLID 485

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G V++ G      LG N  +DG+         P LV     
Sbjct: 486 YNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG-NPASDGK--------MPTLVQD-SL 535

Query: 371 VNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 411
           V E V ++S        AH  A LT   +LY +G G  G+LG
Sbjct: 536 VGEFVEEVSC------GAHHVAVLTSRSELYTWGKGANGRLG 571



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 153/289 (52%), Gaps = 22/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT+ G +Y++G  + ++G LG GT    W P+ +   L+G+++   A G   +
Sbjct: 325 GEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHS 384

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
            L +  G+++ FG  +FG   +G + +  ++ P+ V+ L  +  ++ A G + TA    V
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRES--LSFPKEVQLLSGLKTIKVACGVWHTAAIVEV 442

Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +S+ G      +++T+  G+  RLGH ++   + P   + +L +    QIA G    +AL
Sbjct: 443 MSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLP-TCVSSLIDYNFHQIACGQTLTVAL 501

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  V+++G    G+LG+ + +D K P L+ Q  L+      V+ GA H AV+   
Sbjct: 502 TT--SGH-VFTMGGTAHGQLGNPA-SDGKMPTLV-QDSLVGEFVEEVSCGAHHVAVLTSR 556

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
             + TWG G  G LGHG+ E    P +V+AL D    +++ G ++TT +
Sbjct: 557 SELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSI 605



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 32/287 (11%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V +P+ +ES   + V Q A G    A+++R+G V+T  WG ++  RLGH  E +   P  
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFT--WGEESGGRLGHGFETDFSCPR- 309

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           L+  L    V  +A G  +  A+      +  +  G    G LG G+      P+ +   
Sbjct: 310 LVEFLAVTNVDFVACGEYHTCAVTTS-GDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSG- 367

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  LQ   +A G WH+A+   +G++ T+G G +G LGHG+ E  S PK VQ L+ +K I
Sbjct: 368 PLEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTI 427

Query: 315 HVATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
            VA G + T     V+S+ G       ++++G G+   LGH +            L P  
Sbjct: 428 KVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGS--------KDTYLLPTC 479

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V+SL   N    QI+   ++     T ALT SG ++  G    GQLG
Sbjct: 480 VSSLIDYN--FHQIACGQTL-----TVALTTSGHVFTMGGTAHGQLG 519



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 21/247 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +++FG  + G LGHG  E    P+ ++ L G++ I+ A G   T  I
Sbjct: 380 GTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAI 439

Query: 111 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
               S +G      +++ +G        +G + T L+  P  V SL +    Q A G   
Sbjct: 440 VEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLL--PTCVSSLIDYNFHQIACGQTL 497

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG+      + P  +  +L    V +++ G  ++  L   
Sbjct: 498 TVALTTSGHVFTMGGTAHGQLGNPASDGKM-PTLVQDSLVGEFVEEVSCGAHHVAVLT-- 554

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
            S   +Y+ G G  G+LGHG   D + P L+E  +  +++ +   +        H  V G
Sbjct: 555 -SRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSG 613

Query: 276 QDGRVCT 282
            D  VC+
Sbjct: 614 ADQSVCS 620


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)

Query: 32  RFLLAGEACCRRE---NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
            ++L+ E     E   N +++A G  H++AVT  G +Y+ GSN  GQLGH     + +  
Sbjct: 20  NYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKI 79

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLV 143
           P   ++ + +   A G   +M +++ GQ+Y +G DS G    E + G+Q       P++V
Sbjct: 80  P--GVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQ-----YKPKIV 132

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 201
           ++L ++ +VQ + G      L+  G +YT  WG++   +LG    P +V    L+ +L  
Sbjct: 133 KTLASMLLVQISCGYKHCMALTNHGELYT--WGSNEFGQLGLGLGPGNVSKPTLVNSLVG 190

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           +P+  IA G  +  +     SG AV+  G    G+LG  S+T    P  ++  + + ++ 
Sbjct: 191 LPISFIACGGYH--SFVVSKSG-AVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVK- 246

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 320
             +A G   +  +  DG V T G G YG LGHG+   E VP+ V  L       V  G  
Sbjct: 247 -YIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 305

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV---------TSLKQV 371
           +T  +V   G VYSFG G    LG  +          N  TPQLV         TS+ + 
Sbjct: 306 HTLTLVPSKGRVYSFGLGSVGQLGTKS--------SINSNTPQLVLGPWLSPSGTSMIET 357

Query: 372 NERVVQISL 380
           N++ V  S+
Sbjct: 358 NKQYVVKSI 366



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 33/355 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFG 120
           +Y +G+  +G+LG G  EE +   P  I + + +  I++ A G   T+ +++ GQ+YA G
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
            + FG+  +    TKL    Q +  ++++ +   A G   +  L+  G++YT  WG+D+ 
Sbjct: 61  SNDFGQLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSC 114

Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKL 237
            +LG  T+        ++ TL ++ +VQI+ GY + +AL        +Y+ G    G   
Sbjct: 115 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLG 171

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
                 +   P L+    L+ L    +A G +H+ VV + G V  WG   +G LG  ++ 
Sbjct: 172 LGLGPGNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQT 229

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
             S P  ++ +  VK  ++A G+  +  ++ DG V++ G G    LGH +         +
Sbjct: 230 SLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF--------S 281

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
           N + P+ V  L+ +   V Q++         HT  L  S G++Y+FG G  GQLG
Sbjct: 282 NEIVPRKV--LELMGSTVTQVTCGRR-----HTLTLVPSKGRVYSFGLGSVGQLG 329


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H IA++S+G VYS+G    G+LGHG      RP+ I  L G+ I+  A G   +  
Sbjct: 21  SGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 80

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
           I+ AG +Y +GK  +G   +G    +L   P++VE+L++  V+  A   G+  T  ++ +
Sbjct: 81  ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 138

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             V+++  G+  +LG     +D    PL + +L  + VV++  G  + +AL    SG AV
Sbjct: 139 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT--RSG-AV 193

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           Y+ G G   +LGHG+    + PR +   Q    + + +A G+ H       G V TWG  
Sbjct: 194 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 251

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
             G LG G       P++V AL   K   VA G   T   S
Sbjct: 252 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 292



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 21/274 (7%)

Query: 140 PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           P L+ES++++F+ + A+  G      LS EG VY++  G+D +LGH  + +   P  L+ 
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPK-LIE 61

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L  + +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+++E  Q  
Sbjct: 62  DLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            +  V   +G      V  D  V +WG G YG LG G  +   VP  + +L  +  + V 
Sbjct: 119 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE 178

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G   +  ++  G VY++G G+   LGH            +V  P+ V +L+   ++++ 
Sbjct: 179 CGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIIS 228

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 229 IA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 257



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 8/285 (2%)

Query: 86  PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
           P  + S+Q + I + A  +G    + +S  G VY++G+   G+  +G + +     P+L+
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLI 60

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
           E L  + +V  A G   +A ++  G +YT+  G   RLGH    + + P  ++  L++  
Sbjct: 61  EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYK 119

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V+ +A G      L C      V+S G G  GKLG G     K P  I+   L  L  V 
Sbjct: 120 VIDVACGSGDAQTL-CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKID--SLAGLGVVK 176

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           V  G+  +  + + G V TWG G Y  LGHG ++    P+ V AL   K I +ATG    
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
              S+ G+V+++G  +   LG    +     R  + L  + +T +
Sbjct: 237 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRV 281



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H +A + KG V+++G N  GQLG GTT    RPR + +LQG +I + A G+  T+  
Sbjct: 232 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAW 291

Query: 111 SDA 113
           S A
Sbjct: 292 STA 294


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 27/342 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS   G+LG G  EEE    PR +   Q   + QAA G   T+L++  G++Y  G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           +  G+  +          PQ + +L+N  V Q + G   +  L+  G++  FSWG++A  
Sbjct: 63  NDHGQLGHDTNNLP-NKRPQFISALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATG 119

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH  +        ++ ++    VVQI+ G+ + LAL    +   +++ G    G+LG 
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT---NSGELFAWGANEYGQLGL 176

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G+ T +K P       L  +    +A G  H+  V + G +  WG   +G LG  + +  
Sbjct: 177 GT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             P  ++ L  +   +++ GD  +  ++++G V++ G G    LGH          H N 
Sbjct: 236 CYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT--------HGNE 287

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 400
           + P++V  L  +  ++ QI+         HT A   S GK+Y
Sbjct: 288 ILPRMVFEL--MGSKITQIACGRK-----HTLAFVPSRGKVY 322



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
           QA  G  H++ +T  G +Y+ G+N  GQLGH T      RP+ I +L+   + Q + G  
Sbjct: 40  QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLS 99

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ +++ GQ++++G ++ G+  + +       +P++++S+    VVQ + G+     L+
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALT 158

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
             G +  F+WG +   +LG  T    V    L+ +L  IP+  IA G  +  + A   SG
Sbjct: 159 NSGEL--FAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNH--SFAVSKSG 214

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            A++  G    G+LG        +P  ++  + L ++   ++ G   +  + Q+G V T 
Sbjct: 215 -AIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR--YISCGDDFSVFLTQEGGVFTC 271

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
           G G +G LGHG    E +P++V  L   K   +A G  +T   V   G VY
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A+T+ G ++S+GSN++GQLGH      +  PR I+S+    ++Q + G 
Sbjct: 92  TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++++G+++A+G + +G+   G  G K+ T+  LV+SL  I +   A G   +  +
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTA-TLVKSLAGIPIAFIACGGNHSFAV 210

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           S+ G +  F WG +   +LG +   +   P   L TL ++ V  I+ G  + + L  Q  
Sbjct: 211 SKSGAI--FGWGKNTFGQLGLNDLDSRCYPTQ-LKTLRSLGVRYISCGDDFSVFLT-QEG 266

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
           G  V++ G G  G+LGHG+  +E  PR++  F+L+  +   +A G  H  A V   G+V
Sbjct: 267 G--VFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 24/299 (8%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +Y +G    GE   G    + V +P+ ++  +   V QAA G   T +L+++G++YT   
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            +  +LGH T     +    +  LEN  V Q++ G  + LAL    +   ++S G    G
Sbjct: 63  NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119

Query: 236 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           +LGH         PR+I+      +  V ++ G  H   +   G +  WG   YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177

Query: 295 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
               + VP   +V++L  +    +A G   +F VS+ G ++ +G      LG N + D +
Sbjct: 178 TTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL-DSR 235

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    P  + +L+ +  R +      S++       LT+ G ++  G G  GQLG
Sbjct: 236 -------CYPTQLKTLRSLGVRYISCGDDFSVF-------LTQEGGVFTCGLGTFGQLG 280



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 283 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           WG   +G LG G  E E V  P+ +           A G   T ++++DG +Y+ G  + 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH+   +   N+      PQ +++L+  N  V Q+S   S     H+ ALT  G+L+
Sbjct: 66  GQLGHDT--NNLPNKR-----PQFISALE--NYIVTQVSCGLS-----HSLALTNWGQLF 111

Query: 401 AFGAGDKGQLGIEL 414
           ++G+   GQLG +L
Sbjct: 112 SWGSNATGQLGHDL 125


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 40/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + + Q A G     L++  G+V+ +G++S G   +G+      + P LVE 
Sbjct: 258 PKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVEF 315

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G + T  +S  G ++T  WG    N   LGH TE +   P  + G LE 
Sbjct: 316 LAVNNVDFVACGEYHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLEG 373

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
           + V+ +A G  +  ALA   S   +++ G G  G LGHG R    +PR   + Q+L+ L+
Sbjct: 374 LQVLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGLK 427

Query: 261 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            + VA G WH A    V+ Q G      ++ TWG G    LGHG++E   +P  V AL D
Sbjct: 428 TIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALID 487

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
                +A G   T  ++  G V++ G      LG N ++DG+         P LV   K 
Sbjct: 488 YNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGR--------LPCLVQD-KL 537

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V E V +IS     Y   H   LT   +++ +G G  G+LG
Sbjct: 538 VGEFVEEISC--GAY---HVAVLTSRSEVFTWGRGANGRLG 573



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 32/292 (10%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V +P+ +ES   + V Q A G    A+++R+G V+T  WG ++  RLGH  + +   PH 
Sbjct: 255 VLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFT--WGEESGGRLGHGIDNDFSRPH- 311

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           L+  L    V  +A G  +  A++     +  +  G    G LGHG+      P+ +   
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG- 369

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L  LQ + VA G WH+A+   +G++ T+G G +G LGHG+ E    P+ VQ L+ +K I
Sbjct: 370 PLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTI 429

Query: 315 HVATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
            VA G + T     V+S+ G       ++++G G+   LGH +            L P  
Sbjct: 430 KVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGS--------KETYLLPTC 481

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           V++L   N    Q++  +++     T ALT SG ++  G    GQLG  L +
Sbjct: 482 VSALIDYN--FHQLACGHTM-----TVALTTSGHVFTMGGTAYGQLGNPLSD 526



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 143/340 (42%), Gaps = 69/340 (20%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H   VT +G V+++G  S G+LGHG   +  RP  +  L    +   A G   
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYH 330

Query: 107 TMLISDAGQVYAFGKD-------------------------------------------- 122
           T  +S +G ++ +G                                              
Sbjct: 331 TCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALAT 390

Query: 123 ------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG- 168
                 +FG+  +GV G    + V  P+ V+ L  +  ++ A G + TA    V+S+ G 
Sbjct: 391 SNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGT 450

Query: 169 -----RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
                +++T+  G+  RLGH ++   + P   +  L +    Q+A G+   +AL    SG
Sbjct: 451 NISSRKLFTWGDGDKHRLGHGSKETYLLPT-CVSALIDYNFHQLACGHTMTVALTT--SG 507

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V+++G    G+LG+   +D + P L+ Q +L+      ++ GA+H AV+     V TW
Sbjct: 508 H-VFTMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFVEEISCGAYHVAVLTSRSEVFTW 564

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           G G  G LGHG+ E    P  V+AL D     ++ G   T
Sbjct: 565 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFT 604



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 33/312 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +++FG  + G LGHG  E    PR ++ L G++ I+ A G   T  I
Sbjct: 382 GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 441

Query: 111 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
               S +G      +++ +G        +G + T L+  P  V +L +    Q A G+  
Sbjct: 442 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL--PTCVSALIDYNFHQLACGHTM 499

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG+      + P  +   L    V +I+ G  ++  L   
Sbjct: 500 TVALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQDKLVGEFVEEISCGAYHVAVLT-- 556

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
            S   V++ G G  G+LGHG   D + P  +E  +  N++ +       A+   H  V G
Sbjct: 557 -SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSG 615

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTT 323
            D  VC+       +   R+ C   G   C +       K   A    K   V    Y  
Sbjct: 616 ADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAK 675

Query: 324 FVVSEDGDVYSF 335
              +E GD   F
Sbjct: 676 LKAAEAGDASIF 687


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 195/426 (45%), Gaps = 76/426 (17%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQ 93
           L  EA  + ++ + IA    +I   + G++ S+G+NS G LGH G  E+ W P  I SL 
Sbjct: 541 LLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQLW-PLAIESLS 598

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---------- 143
            +++   AAG   ++ +++ G+V +FG +  G+   G   TK+  S  L           
Sbjct: 599 SVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQC--GQPITKIAESSDLAAVARPRPIVL 656

Query: 144 -ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT----------------- 185
            + L+   VV  A G + +A+++ +G +YTF  G + +LGH T                 
Sbjct: 657 PDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNS 716

Query: 186 -EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
            + +  +P P  L  L    V Q+A G  +    AC     A+Y+ G G  G+LGHG  T
Sbjct: 717 AQTSYFQPKPTRLSALNGQVVKQVACGRFH---SACVTEEGALYTWGRGANGQLGHGDMT 773

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE------- 296
           D+  P+ +E   + +   V VA G  H+A V   G + T G    G LG G+E       
Sbjct: 774 DQATPKRVEA-GIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHG 832

Query: 297 --------EC-ESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
                    C E +P  +  L+   V+ + +A G      ++  G +Y++G G +  LG 
Sbjct: 833 EGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGP 892

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
           +           +V  P  ++S+    + VV ++       + H  ALT+ G+LY +G+ 
Sbjct: 893 S----------GDVSEPTHLSSI----DGVVSVACG-----DIHAAALTDKGQLYMWGSS 933

Query: 406 DKGQLG 411
           + G+LG
Sbjct: 934 EAGRLG 939



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 139/375 (37%), Gaps = 104/375 (27%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--------EEWRP 86
           LA E+    +     AG  HS+ +T  G V SFG N  GQ G   T+           RP
Sbjct: 592 LAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARP 651

Query: 87  RPI---RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------------- 130
           RPI     L+   ++  AAG   + L++  G++Y FG+   GE + G             
Sbjct: 652 RPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG--GEFQLGHDTVMALGEGGNA 709

Query: 131 -------VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
                   Q +     P  + +L    V Q A G F +A ++ EG +YT+  G + +LGH
Sbjct: 710 LHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGH 769

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-------------------------- 217
               +   P  +   +++  +V++A G  +  A+                          
Sbjct: 770 GDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICA 829

Query: 218 -----------ACQ---PSGMAVYSV--------GCGLG--------------GK---LG 238
                      +CQ   P+ +++ SV         CG G              GK   LG
Sbjct: 830 THGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALG 889

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NE 296
            G   D   P  +     +    V VA G  HAA +   G++  WG    G LG G   E
Sbjct: 890 LGPSGDVSEPTHLSSIDGV----VSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTE 945

Query: 297 ECESVPKVVQALNDV 311
                PK+V A  D+
Sbjct: 946 GVTRTPKLVPAFADI 960



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           L+ +  L N     +A   ++  +  Q G + +WG    G LGH     +  P  +++L+
Sbjct: 541 LLSEASLKNKSEEFIAE--YYKNIKEQTGLILSWGANSDGVLGHTGGIEQLWPLAIESLS 598

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            V+   VA G++ +  ++E+G+V SFG  +    G       + +  A V  P+ +    
Sbjct: 599 SVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPD 658

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 423
            + ++ V +S+    Y   H+  +T  G+LY FG G + QLG + V    E GN
Sbjct: 659 DLRKKTV-VSIAAGGY---HSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 27/323 (8%)

Query: 73  GQLGHGTTEEEWRPRPIRSLQGIRI---IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
           G+LG G +  + RP+ IR     +I   + +    G T+ I+  G++Y++G   +G+  +
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503

Query: 130 GVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 188
           G   T+   SP+L+   ++   V Q A+G   +A ++ EG +YT+  G+  RLGH    +
Sbjct: 504 GNHVTQ--KSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561

Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
              P  L+  +  +  V   + +  +++         V+S G G  GKLGHG  +    P
Sbjct: 562 RSIP-TLVKDITGVGSVSCGSSFTVVIS----QDATTVWSFGAGDNGKLGHGDTSRVYRP 616

Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQA 307
           ++I   Q L ++ V  A+ +  +  +   G+V  WG G   CLG+G  +    VPK +  
Sbjct: 617 KVISNLQGLLIRKVCCASQS--SLALTSIGQVFVWGSG--PCLGYGQADATFLVPKRLDE 672

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
             D++ I +A GD     ++ D DVYS+G   S   G        GN ++ VL P+ VT 
Sbjct: 673 FQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCG-------LGNNNSPVLLPRKVTG 725

Query: 368 LKQVNERVVQISL--TNSIYWNA 388
               N  + QIS+  ++SI W A
Sbjct: 726 FD--NHVIYQISVGTSHSIAWTA 746



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 149/302 (49%), Gaps = 11/302 (3%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
            Q   G   +  +   G V + G  S G+LG G +++  R RPI +LQG  + + A     
Sbjct: 3441 QIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGL 3500

Query: 105  -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G ++ +++ G+V+++G   +G+  +G   ++    P+ +E+L+   V+  A G+  +A+
Sbjct: 3501 EGHSLALTETGEVFSWGDGDYGKLGHG--NSERQRRPRQIEALRGEDVLHVACGHKHSAI 3558

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF   +  RLG     N   P  +   L+ I V  IA G  + + +      
Sbjct: 3559 VTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHTVVVTTDRE- 3616

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             +V++ G G  G+LG G  T +  P+ ++ F  LN++   +  GA     + ++G+V + 
Sbjct: 3617 -SVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKK--ICCGARFTLALTKEGKVYSC 3673

Query: 284  GWGR-YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            G  R  G      +  +  P+ V AL++     +A G      ++++GDV+S+G      
Sbjct: 3674 GHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQ 3733

Query: 343  LG 344
            LG
Sbjct: 3734 LG 3735



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 12/259 (4%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            GHS+A+T  G V+S+G    G+LGHG +E + RPR I +L+G  ++  A G   + +++ 
Sbjct: 3502 GHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTV 3561

Query: 113  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
             G+++ FG    G    G    K +  P  V +L+ I V   A G   T V++ +   V+
Sbjct: 3562 DGKLFTFGASDLGRLGLGNTSNKKL--PAQVTALQPIMVELIACGANHTVVVTTDRESVW 3619

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            TF  G   +LG       + P   +     + + +I  G  + LAL  +     VYS G 
Sbjct: 3620 TFGEGEYGQLGLGRTTAKMTPQ-YVDAFSKLNIKKICCGARFTLALTKEGK---VYSCGH 3675

Query: 232  G-LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
                G     ++  + +P   +Q   L+ Q +  +AAG  HA  + ++G V +WG    G
Sbjct: 3676 NRCNGIFEVDTQHADYYP---QQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDG 3732

Query: 290  CLGHGNEECESVPKVVQAL 308
             LG G    +  P ++ +L
Sbjct: 3733 QLGLGQTLPQREPCLISSL 3751



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 25/184 (13%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGRVCT 282
           +YS G G  GKLGHG+   +K P+LI    L  +Q  VV   A G  H+A +  +G + T
Sbjct: 490 IYSWGDGDYGKLGHGNHVTQKSPKLI----LGPMQGKVVRQIAVGYRHSAAITSEGLLYT 545

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESA 341
           WG G YG LGHG+    S+P +V+ +  V +  V+ G   T V+S+D   V+SFG G++ 
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDITGVGS--VSCGSSFTVVISQDATTVWSFGAGDNG 603

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LGH     G  +R   V  P+++++L+ +  R V  +  +S+       ALT  G+++ 
Sbjct: 604 KLGH-----GDTSR---VYRPKVISNLQGLLIRKVCCASQSSL-------ALTSIGQVFV 648

Query: 402 FGAG 405
           +G+G
Sbjct: 649 WGSG 652



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 24/215 (11%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  HS  VT  G +++FG++  G+LG G T  +  P  + +LQ I +   A GA  T+++
Sbjct: 3552 GHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVV 3611

Query: 111  -SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
             +D   V+ FG+  +G+   G    K+  +PQ V++   + + +   G  FT  L++EG+
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKM--TPQYVDAFSKLNIKKICCGARFTLALTKEGK 3669

Query: 170  VYTFSWGNDARLGHH---------TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            VY+         GH+         T+  D  P  ++   E   +  IAAGY + LAL  +
Sbjct: 3670 VYS--------CGHNRCNGIFEVDTQHADYYPQQVMALSEQF-IEDIAAGYEHALALTKE 3720

Query: 221  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
                 V+S G    G+LG G    ++ P LI   Q
Sbjct: 3721 GD---VWSWGNDTDGQLGLGQTLPQREPCLISSLQ 3752



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 27/296 (9%)

Query: 34  LLAGEACCRRENSQAIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-S 91
           L+  E  C+ +N  +  G  GH++A+ S G +YS+G    G+LGHG    +  P+ I   
Sbjct: 459 LIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGP 518

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           +QG  + Q A G   +  I+  G +Y +G   +G   +G   ++ +  P LV+ +  +  
Sbjct: 519 MQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSI--PTLVKDITGVGS 576

Query: 152 VQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           V  + G+ FT V+S++   V++F  G++ +LGH        P  ++  L+ + + ++   
Sbjct: 577 V--SCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPK-VISNLQGLLIRKVCCA 633

Query: 211 YCYLLALACQPSGMAVYSVG----CGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVV 264
                      S +A+ S+G     G G  LG+G + D     P+ +++FQ  +LQ + +
Sbjct: 634 ---------SQSSLALTSIGQVFVWGSGPCLGYG-QADATFLVPKRLDEFQ--DLQIIDI 681

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATG 319
           A G  H   +  D  V +WG    G  G GN      +P+ V   ++     ++ G
Sbjct: 682 AVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVG 737



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D    R I   Q   +  +  + G   H+  + + G V +WG 
Sbjct: 3459 LACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGD 3518

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN E +  P+ ++AL     +HVA G   + +V+ DG +++FG  +   L  
Sbjct: 3519 GDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRL-- 3576

Query: 346  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                 G GN  +N   P  VT+L+ +   ++     +++         T+   ++ FG G
Sbjct: 3577 -----GLGNT-SNKKLPAQVTALQPIMVELIACGANHTV------VVTTDRESVWTFGEG 3624

Query: 406  DKGQLGIELVNNQTERGNPERVD 428
            + GQLG+      T +  P+ VD
Sbjct: 3625 EYGQLGL---GRTTAKMTPQYVD 3644



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 160/392 (40%), Gaps = 76/392 (19%)

Query: 74   QLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-AEYGVQ 132
            QL   T E E  P P +      II+      +   +S   + Y +G    G+ AE G  
Sbjct: 3368 QLITSTKENEILP-PWKLAMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESG-- 3424

Query: 133  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
              +LV  P L  S       Q   G+  T V+  +G V     G+  RLG     +    
Sbjct: 3425 --RLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRL 3480

Query: 193  HPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
             P+   L+   V ++A      G+    +LA   +G  V+S G G  GKLGHG+   ++ 
Sbjct: 3481 RPITA-LQGFVVTELATSTGLEGH----SLALTETG-EVFSWGDGDYGKLGHGNSERQRR 3534

Query: 248  PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
            PR IE  +  ++  + VA G  H+A+V  DG++ T+G    G LG GN   + +P  V A
Sbjct: 3535 PRQIEALRGEDV--LHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA 3592

Query: 308  LNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
            L  +    +A G   T VV+ D + V++FG GE   LG          R    +TPQ V 
Sbjct: 3593 LQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG--------RTTAKMTPQYVD 3644

Query: 367  SLKQVNER----------------------------VVQISLTNSIYW------------ 386
            +  ++N +                            + ++   ++ Y+            
Sbjct: 3645 AFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFI 3704

Query: 387  ------NAHTFALTESGKLYAFGAGDKGQLGI 412
                    H  ALT+ G ++++G    GQLG+
Sbjct: 3705 EDIAAGYEHALALTKEGDVWSWGNDTDGQLGL 3736



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGH 293
           G+LG G  +++  P+LI       ++ +V + G+  H   +  DGR+ +WG G YG LGH
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503

Query: 294 GNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           GN   +  PK++      K +  +A G   +  ++ +G +Y++G G+   LGH       
Sbjct: 504 GNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGH------- 556

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           G+ H+  + P LV  +  V       S T  I  +A T        +++FGAGD G+LG
Sbjct: 557 GDNHSRSI-PTLVKDITGVGSVSCGSSFTVVISQDATT--------VWSFGAGDNGKLG 606



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 17/170 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+SFG+  +G+LGHG T   +RP+ I +LQG+ I +    +  ++ ++  GQV+ +G   
Sbjct: 594 VWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGP 653

Query: 124 ---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
              +G+A+     T LV  P+ ++  +++ ++  A+G+     L+ +  VY  SWGN+A 
Sbjct: 654 CLGYGQAD----ATFLV--PKRLDEFQDLQIIDIAVGDNHCLALTCDNDVY--SWGNNAS 705

Query: 181 ----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
               LG++  P  + P  + G  +N  + QI+ G  + +A    P+   +
Sbjct: 706 GQCGLGNNNSPV-LLPRKVTG-FDNHVIYQISVGTSHSIAWTALPTDRCI 753



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 28/147 (19%)

Query: 282  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            TWG GR+G L          P +  + +  K IH   G  +TFV+  DG V + G G   
Sbjct: 3411 TWGGGRHGQLAESGRLVLQ-PTLTSSFSKAKQIHC--GHNSTFVIEHDGTVLACGEGSYG 3467

Query: 342  SLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             L       GQGN       P+L  +T+L    +  V   L  S     H+ ALTE+G++
Sbjct: 3468 RL-------GQGNSDD---LPRLRPITAL----QGFVVTELATSTGLEGHSLALTETGEV 3513

Query: 400  YAFGAGDKGQLGIELVNNQTERGNPER 426
            +++G GD G+LG          GN ER
Sbjct: 3514 FSWGDGDYGKLG---------HGNSER 3531



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 17/129 (13%)

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESAS 342
           G YG LG G+   ++ PK+++  ++ K  ++ +    D  T  ++ DG +YS+G G+   
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH       GN H    +P+L+    Q  + V QI++        H+ A+T  G LY +
Sbjct: 501 LGH-------GN-HVTQKSPKLILGPMQ-GKVVRQIAVGYR-----HSAAITSEGLLYTW 546

Query: 403 GAGDKGQLG 411
           G GD G+LG
Sbjct: 547 GDGDYGRLG 555



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 36/54 (66%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
            AG  H++A+T +G V+S+G+++ GQLG G T  +  P  I SLQG  I Q +AG
Sbjct: 3709 AGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAG 3762


>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
 gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
          Length = 487

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 163/365 (44%), Gaps = 42/365 (11%)

Query: 47  QAIAGPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
            A +GP   HSI V   G V SFG N  GQLGHGTTE    P+ I  L+   I+QA+ G 
Sbjct: 115 HAASGPSACHSIIVCEDGRVMSFGRNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGR 174

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           G T++++DAG V+ FG +  G+   G Q    +  P  +    +  V +   G  F+ +L
Sbjct: 175 GHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLL 234

Query: 165 SREGRVYTFSWGNDARLGHHTEPN------------DVEPHPL-----------LGTLEN 201
              G +++F      +LGH+T+              +V P  L           +  +E 
Sbjct: 235 DENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEG 294

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + +  +  G  + +AL  Q     V++ G G  G+LGH    DE  PRL+  F      P
Sbjct: 295 VKIKDVVCGNNHTMALDEQ---GRVFTWGFGGYGRLGHQQPKDEHVPRLLTFFNTKG-NP 350

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            V+ AG+ ++  V   G++  WG  +       + E    PK VQ L+  +   V     
Sbjct: 351 SVIFAGSTYSMAVCM-GQLYFWGQTKQ------SGEAAMYPKPVQDLSGWQVRSVGCSK- 402

Query: 322 TTFVVSEDGDVYSFGCGES-ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
           ++ V++ D  V S+G   +   LG+     GQ     +   P++V  L+ +    V   +
Sbjct: 403 SSIVIAADDSVVSWGPSPTYGELGYGLKKGGQ----KSSTNPKIVEPLEDIYVHSVTCGM 458

Query: 381 TNSIY 385
            ++++
Sbjct: 459 GHTLF 463



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 23/240 (9%)

Query: 187 PNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
           PN  EPH L+ TL  I V   A+G   C+ + + C+     V S G    G+LGHG+   
Sbjct: 97  PNLWEPH-LISTLSGIRVRHAASGPSACHSI-IVCEDG--RVMSFGRNDKGQLGHGTTER 152

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
              P++I++ ++ N+  V  + G  H  ++   G V  +G  + G +G G+++  S+P  
Sbjct: 153 CDVPKVIDRLKMHNI--VQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCP 210

Query: 305 VQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN---- 358
           +Q ++  D K   V  G   + ++ E+GD++SFG  E   LGHN   DGQ    +N    
Sbjct: 211 LQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNT--DGQYIVSSNKMGF 268

Query: 359 ---VLTPQLVTSLKQVNERVVQ----ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              VL  +LV  +++  +  V     + + + +  N HT AL E G+++ +G G  G+LG
Sbjct: 269 QCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLG 328



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 58/320 (18%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGA 104
           QA  G GH++ +T  G+V+ FG N  GQ+G G  +    P P++ +     ++ +   GA
Sbjct: 169 QASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGA 228

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL---------------------- 142
             +ML+ + G +++FG   +G+  +   G  +V+S ++                      
Sbjct: 229 EFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGF 288

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           V  ++ + +     GN  T  L  +GRV+T+ +G   RLGH  +P D E  P L T  N 
Sbjct: 289 VNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQ-QPKD-EHVPRLLTFFNT 346

Query: 203 ---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-----HPRLIEQF 254
              P V I AG  Y +A+                 G+L    +T +      +P+ ++  
Sbjct: 347 KGNPSV-IFAGSTYSMAVCM---------------GQLYFWGQTKQSGEAAMYPKPVQDL 390

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGH----GNEECESVPKVVQALN 309
               ++ V  +     + V+  D  V +WG    YG LG+    G ++  + PK+V+ L 
Sbjct: 391 SGWQVRSVGCSKS---SIVIAADDSVVSWGPSPTYGELGYGLKKGGQKSSTNPKIVEPLE 447

Query: 310 DVKAIHVATGDYTTFVVSED 329
           D+    V  G   T  +++D
Sbjct: 448 DIYVHSVTCGMGHTLFIAKD 467



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 38/255 (14%)

Query: 84  WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           W P  I +L GIR+  AA+G  A  ++++ + G+V +FG++  G+  +G   T+    P+
Sbjct: 100 WEPHLISTLSGIRVRHAASGPSACHSIIVCEDGRVMSFGRNDKGQLGHGT--TERCDVPK 157

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPL-L 196
           +++ LK   +VQA+ G   T +L+  G V+ F    D +LG     H +P  + P PL +
Sbjct: 158 VIDRLKMHNIVQASCGRGHTLILTDAGLVFGF---GDNKLGQIGQGHQKPTSL-PCPLQI 213

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------ 244
               +  V ++  G  + + L        ++S G    G+LGH +               
Sbjct: 214 MHPTDKKVTKVCCGAEFSMLLD---ENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQC 270

Query: 245 EKHPRLIEQFQLLNLQPVV----------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           E  PR +  F   N    V          V  G  H   + + GRV TWG+G YG LGH 
Sbjct: 271 EVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQ 330

Query: 295 NEECESVPKVVQALN 309
             + E VP+++   N
Sbjct: 331 QPKDEHVPRLLTFFN 345


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 170/371 (45%), Gaps = 18/371 (4%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+S G NS G+LGHG T        I SLQ   IIQ  AG   T+ ++  G+V   G + 
Sbjct: 435 VWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYND 494

Query: 124 FGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
            G+   G   + + L   P++ ++   I  V A  G   T +++ +GR  T  +    +L
Sbjct: 495 NGQCGQGGTARVSHLCEMPKMGDN--AISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG---MAVYSVGCGLGGKLG 238
           GH    ++  P  ++ +LEN  V  ++  Y Y   +AC+  G     +Y+ G    G+LG
Sbjct: 553 GHGNTASESVPK-IVRSLENRIVRLVSCSY-YHTVMACEEDGSGQQYLYTFGRNDYGQLG 610

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           H    D K P+ +E     +   V VA G +H  VV   G+   +G   YG LG  + E 
Sbjct: 611 HNDSIDRKVPQHVEAMG--DQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMEN 668

Query: 299 ESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
           + VP  V+A L   + + +  G Y T V+     +++FG  +   LG   +     +  A
Sbjct: 669 QLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLG---LGRANASSTA 725

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
           N+   Q   S  ++ E +    +        HT A++++G +Y FG  + GQLG     +
Sbjct: 726 NLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG---TGD 782

Query: 418 QTERGNPERVD 428
             ER  P  +D
Sbjct: 783 TNERVYPFPID 793



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 24/298 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            A  G  H+I VT  G   + G N  GQLGHG T  E  P+ +RSL+   +   +     
Sbjct: 524 HAYNGCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYH 583

Query: 107 TMLISD---AGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           T++  +   +GQ  +Y FG++ +G+  +     + V  PQ VE++ +  VV  A G + T
Sbjct: 584 TVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKV--PQHVEAMGDQHVVSVACGQYHT 641

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            V++  G+ + F   +  +LG  +  N + P  +   LE    ++I  GY + + L    
Sbjct: 642 MVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLC--- 698

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDE------------KHPRLIEQFQLLNLQPVVVAAGAW 269
           SG  +++ G    G+LG G                  + RLIE+ +  ++  V  A G +
Sbjct: 699 SGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDI--VRFACGCY 756

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           H   V  +G +  +G   +G LG G+      P  +      +   VA G Y T V++
Sbjct: 757 HTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVLT 814



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 41/311 (13%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V++ G++S+GE  +G   ++   S + +ESL+   ++Q   GN  T  L+ +G+V T  
Sbjct: 434 EVWSCGQNSYGELGHGDTASR--KSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491

Query: 175 WGND--------ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           + ++        AR+ H  E       P +G   +  + Q+ A       +     G A 
Sbjct: 492 YNDNGQCGQGGTARVSHLCE------MPKMG---DNAISQVHAYNGCEHTILVTMDGRAA 542

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGR----VC 281
            + G    G+LGHG+   E  P+++   +  N    +V+   +H  +   +DG     + 
Sbjct: 543 -TCGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLY 599

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           T+G   YG LGH +     VP+ V+A+ D   + VA G Y T VV+  G  ++FG  +  
Sbjct: 600 TFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LG +++         N L P  V +  + +E  ++I      Y+  HT  L     L+A
Sbjct: 660 QLGIDSM--------ENQLVPVQVRAGLEKHE-CLEIRCG---YY--HTIVLCSGAHLFA 705

Query: 402 FGAGDKGQLGI 412
           FG  D GQLG+
Sbjct: 706 FGRNDYGQLGL 716



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++AV+  GV+Y FG N+ GQLG G T E   P PI    G R+   AAG   T++++  
Sbjct: 757 HTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVLTGG 816

Query: 114 GQVYAFGKDSFGEAE--------YGVQGTKLVTSPQLVESL 146
            +     +D+ G  +         G+  T++++SP + E L
Sbjct: 817 KEDEKNDQDAAGNDKGEGSQSTASGITHTEILSSPSVQELL 857



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 61/203 (30%)

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           D  V + G   YG LGHG+       + +++L   + I +  G+  T  ++ DG V + G
Sbjct: 432 DREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491

Query: 337 ------CG-----------ESASLGHNAIAD----------------------------- 350
                 CG           E   +G NAI+                              
Sbjct: 492 YNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQ 551

Query: 351 -GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK----LYAFGAG 405
            G GN  A+   P++V SL+    R+V  S  +++       A  E G     LY FG  
Sbjct: 552 LGHGNT-ASESVPKIVRSLENRIVRLVSCSYYHTV------MACEEDGSGQQYLYTFGRN 604

Query: 406 DKGQLGIELVNNQTERGNPERVD 428
           D GQLG    N+  +R  P+ V+
Sbjct: 605 DYGQLG---HNDSIDRKVPQHVE 624


>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
          Length = 494

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 168/368 (45%), Gaps = 50/368 (13%)

Query: 46  SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           S  ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    ++ AA G
Sbjct: 123 SCVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACG 182

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              T+ ++D G VY+FG++  G+     Q T  V SP L+ S     +V+ A G  F+ V
Sbjct: 183 RNHTLALTDNGSVYSFGENKLGQLGQCSQ-TYAVLSPALI-SYDGQPLVKVACGAEFSMV 240

Query: 164 LSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLE 200
           +  +G +Y+F      +LGH+++            D E  P              +  + 
Sbjct: 241 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVP 300

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRLI+ F      
Sbjct: 301 NVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRG 357

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              +  G   +  V ++G +  WG      + + + E    PK VQ L   K   +A G 
Sbjct: 358 ASQIYTGYQCSFAVTENGSLSFWG------VTNTSRESTMYPKAVQDLGGWKIRSLACGK 411

Query: 321 YTTFVVSEDGDVYSFG----CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
            ++ +++ D    S+G    CGE   LG+        N+  +  T Q V +L  V    V
Sbjct: 412 -SSIILAADESTISWGPSPTCGE---LGYG------DNKPKSSTTAQEVKTLDGVYVEKV 461

Query: 377 QISLTNSI 384
            +  ++S+
Sbjct: 462 MMGYSHSL 469



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRLEAPKLI 168

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E   L +   V  A G  H   +  +G V ++G  + G LG  ++    +   + + +  
Sbjct: 169 EG--LADHLVVAAACGRNHTLALTDNGSVYSFGENKLGQLGQCSQTYAVLSPALISYDGQ 226

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 367
             + VA G   + VV   G++YSFGC E   LGHN+    IA  Q       + P+ +  
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAI 286

Query: 368 LKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
             + ++    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 287 FIEKSKDGQVMPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 335



 Score = 45.1 bits (105), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 34/131 (25%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
           WG  RYGCL                 NDV+   V +G     + +++ +G ++S+G  E 
Sbjct: 109 WGPHRYGCL-----------------NDVQVSCVVSGPCAAHSLLITTEGKLWSWGRNEK 151

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH     G   R   +  P+L+  L   +  VV  +   +     HT ALT++G +Y
Sbjct: 152 GQLGH-----GDTKR---LEAPKLIEGL--ADHLVVAAACGRN-----HTLALTDNGSVY 196

Query: 401 AFGAGDKGQLG 411
           +FG    GQLG
Sbjct: 197 SFGENKLGQLG 207


>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
 gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
          Length = 440

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 162/354 (45%), Gaps = 31/354 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 103
           Q  +G  H++A++  G VY++G N  G LG  TT   EEE++P  +     + I+  +AG
Sbjct: 83  QVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAG 142

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              T  +SD G VYA+G       + G+Q   +   P ++ + ++  +++ A GN  TA 
Sbjct: 143 DSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAA 202

Query: 164 LSREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLLGTLENIPVVQIAAGYC 212
           L+  G ++T       +LG   E              +EP  L+ + + +    +  G  
Sbjct: 203 LTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEP-ALVRSKKGLKFKDVFCGSF 261

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----QPVVVAAGA 268
               +A   +G  VY+ G    G+LG G       P  ++    LN     + + +A G 
Sbjct: 262 ATFVVA--KTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQ 319

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVS 327
            H  V   +G+V   G   YG LG G+   E+ +P  + +L++     VA G+  +F VS
Sbjct: 320 HHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVS 379

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQIS 379
           + G++YS+G G    LG+       GN   +V TP  V   +L     RV+ +S
Sbjct: 380 DKGELYSWGMGSCLQLGN-------GNDEDDVTTPAKVQGKNLNSETHRVLGVS 426



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 180/394 (45%), Gaps = 56/394 (14%)

Query: 62  GVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--- 117
           G   + G    GQLG G  T E  +P     L+G+ I+Q  +G   T+ +S  G+VY   
Sbjct: 45  GQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYTWG 104

Query: 118 -----AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
                A G+++  E E   Q       P +V    ++ +V  + G+  TA LS +G VY 
Sbjct: 105 CNDDGALGRETTSEGEEEFQ-------PGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYA 157

Query: 173 FSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           +    DA      +P+ V+  P ++ T E+  +++IA+G  +  AL    +   ++++GC
Sbjct: 158 WGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALTTSGN---LFTLGC 214

Query: 232 GLGGKLG--------HGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 279
              G+LG         G R    +   P L+   + L  + V    G++   VV + G  
Sbjct: 215 AEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVF--CGSFATFVVAKTGSD 272

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDV------KAIHVATGDYTTFVVSEDGDVY 333
           V  WG   YG LG G+ +    P  V++L+ +      K I +A G + T V   +G VY
Sbjct: 273 VYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVY 332

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           + G  +   LG   + DG          P  +TSL   NE + +++    +     +FA+
Sbjct: 333 ALGRADYGRLG---LGDGA----KETALPAHITSLD--NEVIEKVACGECV-----SFAV 378

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           ++ G+LY++G G   QLG    N++ +   P +V
Sbjct: 379 SDKGELYSWGMGSCLQLGNG--NDEDDVTTPAKV 410



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 37/320 (11%)

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           ++GQ    G+   G+   G   T     P +   L+ + +VQ   G   T  LS++G+VY
Sbjct: 43  ESGQALTLGQGDVGQLGLGPD-TLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101

Query: 172 TFSWGNDARLGHHTEPN-DVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           T+   +D  LG  T    + E  P ++   +++ +V ++AG  +  AL+ Q +   VY+ 
Sbjct: 102 TWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGT---VYAW 158

Query: 230 GC--GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           G      G++G      +K P +I   +   +  + +A+G  H A +   G + T G   
Sbjct: 159 GTYRDASGQIGLQPDGVKKKPAVILTSESDRI--IKIASGNDHTAALTTSGNLFTLGCAE 216

Query: 288 YGCLGHGNEECESV------------PKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYS 334
            G LG   +EC S             P +V++   +K   V  G + TFVV++ G DVY+
Sbjct: 217 QGQLGR-VKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYA 275

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFA 392
           +G      LG   +             P  V SL Q+N  E+   I++ N  +   HT  
Sbjct: 276 WGLNNYGQLGTGDVQTWH--------FPVKVKSLSQLNKSEKDKHITIANGQH---HTIV 324

Query: 393 LTESGKLYAFGAGDKGQLGI 412
              +GK+YA G  D G+LG+
Sbjct: 325 CDPNGKVYALGRADYGRLGL 344



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)

Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           + G+  T G G  G LG G +  E   P V   L  V  + V +G   T  +S+DG VY+
Sbjct: 43  ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 102

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +GC +  +LG    ++G+         P +V+    VN  +V +S  +S     HT AL+
Sbjct: 103 WGCNDDGALGRETTSEGE-----EEFQPGVVSMPDDVN--IVMVSAGDS-----HTAALS 150

Query: 395 ESGKLYAFGA--GDKGQLGIE 413
           + G +YA+G      GQ+G++
Sbjct: 151 DQGTVYAWGTYRDASGQIGLQ 171


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 12/210 (5%)

Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTE-PNDVEPHPL 195
           +P+ +E+L  I V Q A G+  T VLS++G+VYT  WG ++R  LG   E  + +     
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYT--WGQNSRGQLGLGKEGCSSISSPQC 169

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + +L ++PVVQ++AG  +  AL+   SG +V+  G    G+LG G  TD + P L+    
Sbjct: 170 VRSLSSMPVVQVSAGGDHSFALSV--SG-SVFGWGRNDCGQLGLGDTTDRETPTLV---H 223

Query: 256 LLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            LN++  V AA G  H AV+  DG V T+G G YG LGH +      P++V  L   K  
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVT 283

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            +A G Y T V+++   VYSFGC E   LG
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 11/220 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWRPRPIRSLQGIRIIQAAAG 103
           +Q   G  H++ ++  G VY++G NS GQLG G         P+ +RSL  + ++Q +AG
Sbjct: 125 TQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAG 184

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              +  +S +G V+ +G++  G  + G+  T    +P LV  L     V AA G   TAV
Sbjct: 185 GDHSFALSVSGSVFGWGRNDCG--QLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAV 242

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           L+ +G V+TF  G+  +LGH++  N + P  L+  L    V +IA G  + L L      
Sbjct: 243 LTMDGTVFTFGSGHYGQLGHNSFRNALCPR-LVAELWGAKVTKIACGRYHTLVLT---DH 298

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           M VYS GC   G+LG     +E HP +    QL    P++
Sbjct: 299 MKVYSFGCNEHGQLGP---REETHPCVPLPVQLPREGPII 335



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 139/308 (45%), Gaps = 23/308 (7%)

Query: 84  WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
           + PR + +L GI + Q A G+  T+++S  GQVY +G++S G+   G +G   ++SPQ V
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENI 202
            SL ++ VVQ + G   +  LS  G V  F WG ND       +  D E   L+  L   
Sbjct: 171 RSLSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
             V  A G  +   L    +   V++ G G  G+LGH S  +   PRL+   +L   +  
Sbjct: 229 KTVFAACGKDHTAVLTMDGT---VFTFGSGHYGQLGHNSFRNALCPRLVA--ELWGAKVT 283

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH--VATGD 320
            +A G +H  V+    +V ++G   +G LG   E    VP  VQ   +   I    A GD
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGPIIQNIFAGGD 343

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ-VNERVVQIS 379
            +      + DV        + +    + D    R  +    +L T +KQ +++R    S
Sbjct: 344 SSFATCRPEQDV--------SEVPVEILVD----RWISEWDSKLQTKVKQEIDQRFSSAS 391

Query: 380 LTNSIYWN 387
           L N  + N
Sbjct: 392 LMNRSFLN 399



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 106/230 (46%), Gaps = 33/230 (14%)

Query: 192 PHPL-----LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TD 244
           PHP      L  L  I V Q+A G  + + L+       VY+ G    G+LG G    + 
Sbjct: 107 PHPPFTPRSLEALSGITVTQVACGSQHTVVLS---KDGQVYTWGQNSRGQLGLGKEGCSS 163

Query: 245 EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESV 301
              P+ +     L+  PVV V+AG  H+  +   G V  +GWGR  C  LG G+      
Sbjct: 164 ISSPQCVRS---LSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRET 218

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P +V  LN  K +  A G   T V++ DG V++FG G    LGHN+          N L 
Sbjct: 219 PTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSF--------RNALC 270

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           P+LV  L     +V +I+         HT  LT+  K+Y+FG  + GQLG
Sbjct: 271 PRLVAEL--WGAKVTKIACG-----RYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 8/181 (4%)

Query: 35  LAGEACCRRENS----QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           ++   C R  +S    Q  AG  HS A++  G V+ +G N  GQLG G T +   P  + 
Sbjct: 164 ISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVH 223

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
            L   + + AA G   T +++  G V+ FG   +G  + G    +    P+LV  L    
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYG--QLGHNSFRNALCPRLVAELWGAK 281

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAA 209
           V + A G + T VL+   +VY+F      +LG   E +   P P+    E  P++Q I A
Sbjct: 282 VTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREG-PIIQNIFA 340

Query: 210 G 210
           G
Sbjct: 341 G 341



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 16/126 (12%)

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P+ ++AL+ +    VA G   T V+S+DG VY++G      LG       +G   +++ +
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK----EGC--SSISS 166

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 421
           PQ V SL  +   VVQ+S         H+FAL+ SG ++ +G  D GQLG+    + T+R
Sbjct: 167 PQCVRSLSSMP--VVQVSAGGD-----HSFALSVSGSVFGWGRNDCGQLGL---GDTTDR 216

Query: 422 GNPERV 427
             P  V
Sbjct: 217 ETPTLV 222


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AVT  G +Y +G N+   G LG G+   +W PR +   L+GI +   + G   T
Sbjct: 365 GEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHT 424

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  +FG   +G + +  V+ P+ VESLK +  ++AA G + TA +   
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEI 482

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   + P   + TL      Q+A G+    
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPT-CVATLVEPNFCQVACGHSLTA 541

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   VY++G  + G+LG+  + D   P  +E   + N    + A GA+H AV+ 
Sbjct: 542 ALT---TTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNFVEEL-ACGAYHVAVLT 596

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
               V TWG G  G LGHG+ +  + P VV+AL D +   +  G   T  +
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 153/352 (43%), Gaps = 40/352 (11%)

Query: 76  GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
           G G   + + P+ + S   + +   A G     L++  G+V+++G++  G   +GV    
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD- 344

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 191
            V+ P+ V+ LKN  V   A G + +  ++  G +Y   WG +A     LG  +E     
Sbjct: 345 -VSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWV 401

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           P  L G LE I V  ++ G  +   +    S   +++ G G  G LGHG R     PR +
Sbjct: 402 PRKLDGPLEGIHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRISVSIPREV 458

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 299
           E  +   L+ +  A G WH A V +             G++ TWG G    LGHG++E  
Sbjct: 459 ESLK--GLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEAR 516

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
            VP  V  L +     VA G   T  ++  G VY+ G      LG N  ADG        
Sbjct: 517 LVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADG-------- 567

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           + P  V    ++ +  V+  L    Y   H   LT   ++Y +G G  G+LG
Sbjct: 568 MLPTRVEG--KLMKNFVE-ELACGAY---HVAVLTSRTEVYTWGKGANGRLG 613



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 149/313 (47%), Gaps = 40/313 (12%)

Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP 187
           GVQ    V  P+ +ES   + V   A G    A+++++G V  FSWG +   RLGH  + 
Sbjct: 288 GVQMDSFV--PKALESAVLLDVQAIACGRQHAALVTKQGEV--FSWGEELGGRLGHGVD- 342

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           +DV     +  L+N  V  +A G  +  A+      + ++       G LG GS   +  
Sbjct: 343 SDVSHPKFVDGLKNFNVELVACGEYHSCAVTLS-GDLYIWGGNAYNFGLLGCGSEATQWV 401

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           PR ++   L  +    V+ G WH AVV   G++ T+G G +G LGHG+    S+P+ V++
Sbjct: 402 PRKLDG-PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVES 460

Query: 308 LNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNR 355
           L  ++ +  A G + T  V E             G ++++G G+   LGH       G++
Sbjct: 461 LKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGH-------GDK 513

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            A  L P  V +L + N    Q++  +S+     T ALT +G++Y  G+   GQLG    
Sbjct: 514 EAR-LVPTCVATLVEPN--FCQVACGHSL-----TAALTTTGQVYTMGSPVYGQLG---- 561

Query: 416 NNQTERGNPERVD 428
           N Q +   P RV+
Sbjct: 562 NPQADGMLPTRVE 574



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 23/254 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    GP H+  VTS G +++FG  + G LGHG       PR + SL+G+R ++AA G  
Sbjct: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVW 474

Query: 106 RTMLISD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            T  + +            +G+++ +G        +G +  +LV  P  V +L      Q
Sbjct: 475 HTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLV--PTCVATLVEPNFCQ 532

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G+  TA L+  G+VYT       +LG + + + + P  + G L    V ++A G  +
Sbjct: 533 VACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADGMLPTRVEGKLMKNFVEELACGAYH 591

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
           +  L    S   VY+ G G  G+LGHG   D   P ++E  +   ++ +V      AA  
Sbjct: 592 VAVLT---SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAIC 648

Query: 269 WHAAVVGQDGRVCT 282
            H  V G D  +C+
Sbjct: 649 LHKWVSGIDQSMCS 662


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  111 bits (277), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 40/376 (10%)

Query: 59  TSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           T +G++ ++GS+S+ +LG    G  + +  P  + +     I   + G+  +  +++ G 
Sbjct: 586 TQRGIM-TWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGD 644

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           VY +G+ S         G   +     P  VESL  + +V  +IG + +A L   G + T
Sbjct: 645 VYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLV--SIGYYHSAALKSNGELLT 702

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +  G D +LGH    N   P  ++ T+ +  V Q+  G  + +   C      V++ G  
Sbjct: 703 WGCGEDGQLGHGDVLNQTIPK-VVQTMTSHWVTQVQCGEKHTI---CLTKNGKVFTWGTS 758

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G       P L+   +  N+  + +A G+ H AV+     V  +G G      
Sbjct: 759 EYGQLGLGDTQKNCTPMLVTSLEKYNI--IQIACGSTHCAVLTNAREVLVFGNGA----A 812

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G+    SVP +V AL  +    ++ G Y+T  ++E GDVY++G G+   LGH       
Sbjct: 813 MGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGT----- 865

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              + + L P+LV  L+  ++ + QIS         H   LT+SGK+Y  G    GQLG 
Sbjct: 866 ---NQSELHPKLVDGLR--SQSIRQISCGGR-----HMAFLTDSGKIYTCGKDPFGQLG- 914

Query: 413 ELVNNQTERGNPERVD 428
              + Q ++  P+++D
Sbjct: 915 ---HAQGDQNKPKKID 927



 Score =  102 bits (254), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 17/268 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS A+ S G + ++G    GQLGHG    +  P+ ++++    + Q   G   T+ ++  
Sbjct: 690 HSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKN 749

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+V+ +G   +G  + G+  T+   +P LV SL+   ++Q A G+   AVL+    V  F
Sbjct: 750 GKVFTWGTSEYG--QLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVF 807

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGCG 232
             GN A +G     N +    ++  L+++ + +++ G+    AL  C      VY+ G  
Sbjct: 808 --GNGAAMG---SANIISVPMMVPALKHLNIERLSCGHYSTAALTECGD----VYTWGS- 857

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
            G +LGHG+   E HP+L++  +  +++   ++ G  H A +   G++ T G   +G LG
Sbjct: 858 -GQELGHGTNQSELHPKLVDGLRSQSIRQ--ISCGGRHMAFLTDSGKIYTCGKDPFGQLG 914

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGD 320
           H   + ++ PK + +L     I V+ G+
Sbjct: 915 HAQGD-QNKPKKIDSLLKTTFISVSCGE 941



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 17/228 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H+I +T  G V+++G++  GQLG G T++   P  + SL+   IIQ A G+ 
Sbjct: 734 TQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGST 793

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              ++++A +V  FG  +       +    +++ P +V +LK++ + + + G++ TA L+
Sbjct: 794 HCAVLTNAREVLVFGNGA------AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALT 847

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             G VYT  WG+   LGH T  N  E HP L+  L +  + QI+ G  ++  L    SG 
Sbjct: 848 ECGDVYT--WGSGQELGHGT--NQSELHPKLVDGLRSQSIRQISCGGRHMAFLT--DSG- 900

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            +Y+ G    G+LGH ++ D+  P+ I+   LL    + V+ G  H A
Sbjct: 901 KIYTCGKDPFGQLGH-AQGDQNKPKKID--SLLKTTFISVSCGENHNA 945


>gi|444912858|ref|ZP_21233017.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716551|gb|ELW57397.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 394

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 171/365 (46%), Gaps = 57/365 (15%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A  S G V+++G N++GQLG GTT     P  I +L  +  +  AAG G ++ +  A
Sbjct: 67  HSLARRSDGSVWAWGENTTGQLGDGTTTLRSTPTKIATLSNMERV--AAGHGHSLALR-A 123

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+V+A+GK   G          + T+P  V  L ++  + A   +     LS+ G+V+  
Sbjct: 124 GKVWAWGKPDSG---------AIKTAPVEVPGLSDVVAIAAGFSHSL--ALSQSGQVW-- 170

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
           SWGND     +  P  VE  P         +  IAAG  Y LAL    S   V++ G   
Sbjct: 171 SWGNDNAGHANNTPVQVEGLP--------GIKAIAAGVSYSLALGTDGS---VWAWGDNT 219

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG  + +    P  + +  ++      +AAG+ HA  +   G V TWG   +G LG 
Sbjct: 220 LGQLGSDTPSSAT-PVKVAELPMITF----IAAGSTHALALDTAGGVWTWGANDHGQLGD 274

Query: 294 GNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G    + S P+ V  L +++A+  A G+  +  ++   DV ++G   +  LG +      
Sbjct: 275 GTTSTKRSQPQQVSGLANIQAL--AGGNGHSLALNSANDVMAWGRDSAGQLGDD------ 326

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA---HTFALTESGKLYAFGAGDKGQ 409
                         SLK  +  V   SLTN+   +A   H+ A+   G L+A+G+ + G+
Sbjct: 327 -------------LSLKDQSRPVKTSSLTNATAISAGHSHSLAVLSDGSLFAWGSNENGR 373

Query: 410 LGIEL 414
           LG+ L
Sbjct: 374 LGVIL 378



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 108
           AG  H++A+ + G V+++G+N  GQLG GTT  + R +P + + G+  IQA AG  G ++
Sbjct: 247 AGSTHALALDTAGGVWTWGANDHGQLGDGTTSTK-RSQP-QQVSGLANIQALAGGNGHSL 304

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ A  V A+G+DS G+    +   K  + P    SL N   + A   +   AVLS +G
Sbjct: 305 ALNSANDVMAWGRDSAGQLGDDLS-LKDQSRPVKTSSLTNATAISAGHSHSL-AVLS-DG 361

Query: 169 RVYTFSWGNDARLGHHTE-PNDVEPHPL 195
            ++ +    + RLG     P++  P PL
Sbjct: 362 SLFAWGSNENGRLGVILPLPSETIPTPL 389



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+ + G V+++G N+ GQLG  T        P++  +   I   AAG+   + 
Sbjct: 198 AGVSYSLALGTDGSVWAWGDNTLGQLGSDTPSSA---TPVKVAELPMITFIAAGSTHALA 254

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +  AG V+ +G +  G+   G   TK  + PQ V  L NI  +  A GN  +  L+    
Sbjct: 255 LDTAGGVWTWGANDHGQLGDGTTSTKR-SQPQQVSGLANIQAL--AGGNGHSLALNSAND 311

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V   +WG D+  +LG      D        +L N     I+AG+ + LA+    S   ++
Sbjct: 312 V--MAWGRDSAGQLGDDLSLKDQSRPVKTSSLTN--ATAISAGHSHSLAVLSDGS---LF 364

Query: 228 SVGCGLGGKLG 238
           + G    G+LG
Sbjct: 365 AWGSNENGRLG 375



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 24/244 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A++  G V+S+G++++G   +        P  +  L GI+ I  AAG   ++ 
Sbjct: 155 AGFSHSLALSQSGQVWSWGNDNAGHANN-------TPVQVEGLPGIKAI--AAGVSYSLA 205

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+       T    +P  V  L  I  + A  G+     L   G 
Sbjct: 206 LGTDGSVWAWGDNTLGQLG---SDTPSSATPVKVAELPMITFIAA--GSTHALALDTAGG 260

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+T+   +  +LG  T          +  L NI    +A G  + LAL    S   V + 
Sbjct: 261 VWTWGANDHGQLGDGTTSTKRSQPQQVSGLANIQA--LAGGNGHSLALN---SANDVMAW 315

Query: 230 GCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG   S  D+  P  ++   L N     ++AG  H+  V  DG +  WG    
Sbjct: 316 GRDSAGQLGDDLSLKDQSRP--VKTSSLTNA--TAISAGHSHSLAVLSDGSLFAWGSNEN 371

Query: 289 GCLG 292
           G LG
Sbjct: 372 GRLG 375



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 38/195 (19%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           +V++ G    G+LG G+ T    P  I    L N++   VAAG  H+  + + G+V  WG
Sbjct: 76  SVWAWGENTTGQLGDGTTTLRSTPTKIAT--LSNME--RVAAGHGHSLAL-RAGKVWAWG 130

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G +       ++ P  V  L+DV AI  A G   +  +S+ G V+S+G        
Sbjct: 131 KPDSGAI-------KTAPVEVPGLSDVVAI--AAGFSHSLALSQSGQVWSWGN------- 174

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                D  G  HAN  TP  V  L  +      +S         ++ AL   G ++A+G 
Sbjct: 175 -----DNAG--HANN-TPVQVEGLPGIKAIAAGVS---------YSLALGTDGSVWAWGD 217

Query: 405 GDKGQLGIELVNNQT 419
              GQLG +  ++ T
Sbjct: 218 NTLGQLGSDTPSSAT 232


>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 469

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 177/408 (43%), Gaps = 82/408 (20%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P P+ +L G++I+QAA G    
Sbjct: 83  VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHC 142

Query: 108 MLISDAGQVYAFGK------------DSFG----EAEYGVQGTKLVTS--PQLVESLKNI 149
           + + D G  YA+G+            + +G    E E    GT+ +    P        +
Sbjct: 143 LAVDDNGHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKL 202

Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVV 205
            V Q A G   + VL++EG V+T+        G    P D++    P  + G LE + V+
Sbjct: 203 KVRQVAAGGTHSVVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRVI 253

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            + A       LA    G+ +++ G    G+LG G      HP  +E    L+L  V +A
Sbjct: 254 AVGA----FHNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSL--VDIA 306

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDYTT 323
           AG WH+  +   G                  E  S+P  +      DV+ I      Y T
Sbjct: 307 AGGWHSTALTIQG------------------EINSLPCYLFRACFKDVQIIKYQKYTYYT 348

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
                   VY++G GE   LG        G+  ++ + P  V  L    E +VQ+S   +
Sbjct: 349 M------KVYAWGRGEHGRLGF-------GDDKSSRMVPLKVELL--AGEDIVQVSCGGT 393

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 431
                H+ ALT  G+++++G GD G+LG      +   G P  VDIDL
Sbjct: 394 -----HSVALTRDGRMFSYGRGDHGRLGY---GRKLTTGQPMGVDIDL 433



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 102/251 (40%), Gaps = 57/251 (22%)

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G G  G+LG G   ++     +E      +  VV  AG+ ++  + +DGR+ TWGW + G
Sbjct: 50  GSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVV--AGSRNSLAICEDGRLFTWGWNQRG 107

Query: 290 CLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG------------ 336
            LGH  + + ES P  V AL  +K +  A G +    V ++G  Y++G            
Sbjct: 108 TLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGRGTRFPAFSVTG 167

Query: 337 ------CGESASLGHNA-------IADGQ-------------GNRHANVLT--------- 361
                 CGE      +        I   Q             G  H+ VLT         
Sbjct: 168 GNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWG 227

Query: 362 -PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNN 417
            P     +KQ++   RV  +     I   A H  ALTE G L+A+G  + GQLG     +
Sbjct: 228 QPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TGD 284

Query: 418 QTERGNPERVD 428
              R +P RV+
Sbjct: 285 TQPRSHPIRVE 295


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 177/396 (44%), Gaps = 42/396 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   GP  +  + S   V+ +GS     LG     +   PR + S + + +   A G   
Sbjct: 215 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 273

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             +I+  G+VY +G  S G  +  V      + P++VESL ++ V   A G+  T  ++ 
Sbjct: 274 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 331

Query: 167 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G +  F WG  A  LG   +    N   PH  LG ++NI V +IA G  +   +    S
Sbjct: 332 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 386

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
              +++ G G  G LGHG       P+ +E  +   ++ V  A G WH A +        
Sbjct: 387 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 444

Query: 275 --GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
                G++ TWG    G LGH + + + +P  V +L     I V+ G   T V++  G V
Sbjct: 445 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           ++ G      LG N  ADG+     +V  P     LK   E V +IS  +S     H   
Sbjct: 505 FTIGSSRHGQLG-NPKADGESI--CSVEGP-----LK--TEFVREISSGSS-----HVAV 549

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           LT SGK++ +G G +GQLG+    + + R +P  V+
Sbjct: 550 LTMSGKVFTWGKGAEGQLGL---GDYSNRSSPTLVE 582



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q+IA G  H+  +T +G VY++GS SSG+L          P+ + SL  + +   A G+ 
Sbjct: 265 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 324

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            T  I+ +G+++ +G+   G    G+     G       + +  + NI V + A G + T
Sbjct: 325 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 381

Query: 162 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           A+++  G+++T+  G    LGH        P +VE      +L+   V  +A G  +  A
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 435

Query: 217 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
           +           PSG  +++ G    GKLGH  R  +  P  ++     +L  + V+ G 
Sbjct: 436 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 492

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
               V+   G V T G  R+G LG+   + ES+  V   L       +++G     V++ 
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 552

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            G V+++G G    LG   + D     ++N  +P LV +L+
Sbjct: 553 SGKVFTWGKGAEGQLG---LGD-----YSNRSSPTLVEALE 585



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  H+  +TS G ++++G  + G LGHG T+   RP+ + SL+G R+   A G  
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431

Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            T  I +          +G+++ +G    G+  +  +  KL+  P  V+SL    ++Q +
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 489

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   T VL+  G V+T       +LG + + +      + G L+   V +I++G  ++ 
Sbjct: 490 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 548

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
            L    SG  V++ G G  G+LG G  ++   P L+E  +  +++ VV      AA   H
Sbjct: 549 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 605

Query: 271 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
             +  +D  VC+     +G+ R  + C   G+  C S
Sbjct: 606 KTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 38/384 (9%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAAGAGRTMLI 110
           S+AV S G  Y++G N+ GQLG  TT     P  +R   G+      +Q +AG   ++ +
Sbjct: 572 SLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLAL 631

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVT-----SPQLVESLKNIFVVQAAIGNFFTAVLS 165
              G VYA+G +  G+     +    V           +  K +  +Q + G+  +  L 
Sbjct: 632 GSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALD 691

Query: 166 REGRVYTFSWGNDARLGHHTEPNDV------EPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             G VY + W ++ RLG+++  +        +P       + +  VQ++AG+ + LA+  
Sbjct: 692 SNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVG- 750

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-----LQPVVVAAGAWHAAVV 274
             S    Y+ G    G+LG+ S+     P  +  F   N     L+ V V+AG  H+  V
Sbjct: 751 --SDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAV 808

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-------ALNDVKAIHVATGDYTTFVVS 327
           G DG    WG   YG LG+ N    +VP  V+       A   +KA  +  G   +  V 
Sbjct: 809 GSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVG 868

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
            +G  Y++G      LG            +N   P  V       +    +  T     +
Sbjct: 869 NNGYAYAWGWNLYRQLGDGTT--------SNSSVPVPVRDPTSPADASKGLQATRFSVGD 920

Query: 388 AHTFALTESGKLYAFGAGDKGQLG 411
            H+ A+  +G  YA+G    GQLG
Sbjct: 921 HHSLAVGSNGYAYAWGENSYGQLG 944



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 148/346 (42%), Gaps = 57/346 (16%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-------RPIRSLQGIRIIQ 99
           Q  AG  HS+A+ S G VY++GSN  GQLG+ T      P        P    +G++ IQ
Sbjct: 620 QVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQ 679

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLKNIFVV 152
            +AG   ++ +   G VYA+G +  G    G   T   + P  V       +  K +  V
Sbjct: 680 VSAGDEHSLALDSNGYVYAWGWNDNG--RLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 153 QAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTE--------------PNDVEPHPLL 196
           Q + G   +  +  +G  YT++WG  N  +LG+ ++              PND       
Sbjct: 738 QVSAGWHHSLAVGSDG--YTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDAN----- 790

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQ 255
              + +  VQ++AGY + LA+    S    Y+ G    G+LG+ +  D   P R+ +   
Sbjct: 791 ---KGLKAVQVSAGYSHSLAVG---SDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTS 844

Query: 256 LLN----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ----- 306
             +    L+   + AG  H+  VG +G    WGW  Y  LG G     SVP  V+     
Sbjct: 845 PKDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP 904

Query: 307 --ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
             A   ++A   + GD+ +  V  +G  Y++G      LG     D
Sbjct: 905 ADASKGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDD 950



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 18/218 (8%)

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ--LLNLQPVVVAAGA 268
           Y Y+ +LA    G A Y+ G    G+LG  +      P ++ +      +   V V+AG 
Sbjct: 567 YTYVFSLAVGSDGKA-YAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGK 625

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALND------VKAIHVATGDY 321
           WH+  +G DG V  WG  ++G LG+  +   SVP +V    N       +KAI V+ GD 
Sbjct: 626 WHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDE 685

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            +  +  +G VY++G  ++  LG+N+  D   +    V  P   T   +   + VQ+S  
Sbjct: 686 HSLALDSNGYVYAWGWNDNGRLGNNSTTD--SSVPVRVRDPASPTDPSK-GLKAVQVSAG 742

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
               W+ H+ A+   G  YA+G  + GQLG    N+ +
Sbjct: 743 ----WH-HSLAVGSDGYTYAWGLNNYGQLGNSSKNSSS 775



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 36/287 (12%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-------RPIRSLQGIRIIQ 99
           Q  AG  HS+A+ S G VY++G N +G+LG+ +T +   P        P    +G++ +Q
Sbjct: 679 QVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQ 738

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGE--------AEYGVQGTKLVTSPQLVESLKNIFV 151
            +AG   ++ +   G  YA+G +++G+        + + V+  +   SP   ++ K +  
Sbjct: 739 VSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVR-VRDFASPN--DANKGLKA 795

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHH-----TEPNDV-EPHPLLGTLENIP 203
           VQ + G   +  +  +G  YT++WG  N  +LG+      T P  V +P       + + 
Sbjct: 796 VQVSAGYSHSLAVGSDG--YTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLK 853

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-----N 258
              I AG  + LA+    +G A Y+ G  L  +LG G+ ++   P  +            
Sbjct: 854 ATAINAGGEHSLAVGN--NGYA-YAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKG 910

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
           LQ    + G  H+  VG +G    WG   YG LG G  +  +VP  V
Sbjct: 911 LQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 29/240 (12%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-------QGIRIIQ 99
           Q  AG  HS+AV S G  Y++G N+ GQLG+ +      P  +R         +G++ +Q
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLV-----TSPQLVESLKNIFVV 152
            +AG   ++ +   G  YA+G +++G+      V  T  V     TSP+  ++ K +   
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPK--DASKGLKAT 855

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL------ENIPVVQ 206
               G   +  +   G  Y + W    +LG  T  N   P P+          + +   +
Sbjct: 856 AINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATR 915

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
            + G  + LA+    +G A Y+ G    G+LG G+  D   P  +    L NLQPV+ AA
Sbjct: 916 FSVGDHHSLAVGS--NGYA-YAWGENSYGQLGDGTTDDSNVPVSV----LFNLQPVITAA 968


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 9/232 (3%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           GH  AVT  G V+++G  + G+LGH    E   P  +  L G+R ++ A G   T+ ++D
Sbjct: 113 GHMAAVTEDGSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD 171

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            G+V+A+G +  G      +GT    +PQ +ESL+   ++  + G   +A LS E  VYT
Sbjct: 172 DGRVFAWGNNKTGCVGVSDRGT---CAPQEIESLRGKKIIDISAGMESSAALSAEHEVYT 228

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           +   N  +LG       +     + TL N+P+VQIA G  ++LAL+   +   VY+ G G
Sbjct: 229 WGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALS---AAGEVYAWGQG 285

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           L G+  +  + D   P +I+  +   ++  ++AAG  H+AVV   GR+ T G
Sbjct: 286 LQGQTANEKKVDTNIPHVIDALKESRVK--MIAAGGSHSAVVDDKGRLFTVG 335



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 17/281 (6%)

Query: 62  GVVYSFGSNSSGQLGHGTTEE---EWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAGQVY 117
           GV+++FG   S QLGHG T +   +  PR +  +  G+ ++  +   G    +++ G V+
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G+ +FG   + V  T +   P+ V  L  +  V+ A G+  T  L+ +GRV  F+WGN
Sbjct: 126 TWGRGTFGRLGHEVHETGI---PEKVPGLDGMRFVKVACGHVHTLALTDDGRV--FAWGN 180

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK- 236
           +                 + +L    ++ I+AG     AL+ +     VY+ G    G+ 
Sbjct: 181 NKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHE---VYTWGADNYGQL 237

Query: 237 -LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
            LG G+R   +  R+     L N+  V +A G +H   +   G V  WG G  G   +  
Sbjct: 238 GLGQGARYISQPTRI---RTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEK 294

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           +   ++P V+ AL + +   +A G   + VV + G +++ G
Sbjct: 295 KVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 30/368 (8%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           G +Y++GS   GQLG GT  +E  P+  + +        AAGA  T  I+  G ++ FG+
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 122 DSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
               +  +G  G  +  V   ++ ++   + VV  +I +   A ++ +G V+T+  G   
Sbjct: 74  GDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFG 133

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           RLGH      + P  + G L+ +  V++A G+ + LAL        V++ G    G +G 
Sbjct: 134 RLGHEVHETGI-PEKVPG-LDGMRFVKVACGHVHTLALTDDGR---VFAWGNNKTGCVGV 188

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EEC 298
             R     P+ IE   L   + + ++AG   +A +  +  V TWG   YG LG G     
Sbjct: 189 SDR-GTCAPQEIE--SLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARY 245

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
            S P  ++ L +V  + +A G Y    +S  G+VY++G G      +    D       N
Sbjct: 246 ISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKVD------TN 299

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           +  P ++ +LK+   RV  I+   S     H+  + + G+L+  G  +      E+V  +
Sbjct: 300 I--PHVIDALKE--SRVKMIAAGGS-----HSAVVDDKGRLFTVGEEED----WEVVRVR 346

Query: 419 TERGNPER 426
           TER   ER
Sbjct: 347 TERTAGER 354



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 30/307 (9%)

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           + G +Y +G   FG+   G Q  + +  PQ+ + + N      A G   TA +++ G ++
Sbjct: 12  EGGYLYTWGSGQFGQLGIGTQNDESL--PQIAKEIDNEICTFTAAGANTTAAITQGGVLW 69

Query: 172 TFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           TF  G+  +LGH       N V P  +    + + VV  +    ++ A+    S   V++
Sbjct: 70  TFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGS---VWT 126

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            G G  G+LGH     E H   I +    L  ++ V VA G  H   +  DGRV  WG  
Sbjct: 127 WGRGTFGRLGH-----EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           + GC+G  ++     P+ +++L   K I ++ G  ++  +S + +VY++G      LG  
Sbjct: 182 KTGCVGV-SDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGL- 239

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
               GQG R+  +  P  + +L+ V   +VQI+         H  AL+ +G++YA+G G 
Sbjct: 240 ----GQGARY--ISQPTRIRTLRNVP--IVQIACGQY-----HMLALSAAGEVYAWGQGL 286

Query: 407 KGQLGIE 413
           +GQ   E
Sbjct: 287 QGQTANE 293



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 15/150 (10%)

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G + TWG G++G LG G +  ES+P++ + +++      A G  TT  +++ G +++FG 
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G+S  LGH    D      +N + P      ++V +    +S+ N    + H  A+TE G
Sbjct: 74  GDSNQLGHGDTGD-----CSNQVLP------REVEDAFDGLSVVNCSICDGHMAAVTEDG 122

Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            ++ +G G  G+LG E+     E G PE+V
Sbjct: 123 SVWTWGRGTFGRLGHEV----HETGIPEKV 148



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%)

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A +  G  +Y+ G G  G+LG G++ DE  P++ ++    N      AAGA   A + Q 
Sbjct: 8   AQEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEID--NEICTFTAAGANTTAAITQG 65

Query: 278 GRVCTWGWGRYGCLGHGNE-ECES--VPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVY 333
           G + T+G G    LGHG+  +C +  +P+ V+ A + +  ++ +  D     V+EDG V+
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G G    LGH     G          P+ V  L  +  R V+++       + HT AL
Sbjct: 126 TWGRGTFGRLGHEVHETG---------IPEKVPGLDGM--RFVKVACG-----HVHTLAL 169

Query: 394 TESGKLYAFGAGDKGQLGI 412
           T+ G+++A+G    G +G+
Sbjct: 170 TDDGRVFAWGNNKTGCVGV 188


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 177/396 (44%), Gaps = 42/396 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   GP  +  + S   V+ +GS     LG     +   PR + S + + +   A G   
Sbjct: 215 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 273

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             +I+  G+VY +G  S G  +  V      + P++VESL ++ V   A G+  T  ++ 
Sbjct: 274 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 331

Query: 167 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G +  F WG  A  LG   +    N   PH  LG ++NI V +IA G  +   +    S
Sbjct: 332 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 386

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
              +++ G G  G LGHG       P+ +E  +   ++ V  A G WH A +        
Sbjct: 387 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 444

Query: 275 --GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
                G++ TWG    G LGH + + + +P  V +L     I V+ G   T V++  G V
Sbjct: 445 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           ++ G      LG N  ADG+     +V  P     LK   E V +IS  +S     H   
Sbjct: 505 FTIGSSRHGQLG-NPKADGES--ICSVEGP-----LK--TEFVREISSGSS-----HVAV 549

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           LT SGK++ +G G +GQLG+    + + R +P  V+
Sbjct: 550 LTMSGKVFTWGKGAEGQLGL---GDYSNRSSPTLVE 582



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q+IA G  H+  +T +G VY++GS SSG+L          P+ + SL  + +   A G+ 
Sbjct: 265 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 324

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            T  I+ +G+++ +G+   G    G+     G       + +  + NI V + A G + T
Sbjct: 325 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 381

Query: 162 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           A+++  G+++T+  G    LGH        P +VE      +L+   V  +A G  +  A
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 435

Query: 217 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
           +           PSG  +++ G    GKLGH  R  +  P  ++     +L  + V+ G 
Sbjct: 436 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 492

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
               V+   G V T G  R+G LG+   + ES+  V   L       +++G     V++ 
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 552

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            G V+++G G    LG   + D     ++N  +P LV +L+
Sbjct: 553 SGKVFTWGKGAEGQLG---LGD-----YSNRSSPTLVEALE 585



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  H+  +TS G ++++G  + G LGHG T+   RP+ + SL+G R+   A G  
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431

Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            T  I +          +G+++ +G    G+  +  +  KL+  P  V+SL    ++Q +
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 489

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   T VL+  G V+T       +LG + + +      + G L+   V +I++G  ++ 
Sbjct: 490 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 548

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
            L    SG  V++ G G  G+LG G  ++   P L+E  +  +++ VV      AA   H
Sbjct: 549 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 605

Query: 271 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
             +  +D  VC+     +G+ R  + C   G+  C S
Sbjct: 606 KTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 173/356 (48%), Gaps = 39/356 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+ +GSNSS Q   G TE    PR +RSL  ++  Q  AG   T +I   G V A GK+S
Sbjct: 344 VFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQ--QVEAGQYCTFIIDTKGCVSACGKNS 401

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLG 182
           +G    G    + V  P+ +     I  V ++ G +  +  LS  G VY++  G+  +LG
Sbjct: 402 YGRLGLGNSSNQPV--PKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLG 459

Query: 183 H-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
           H     H EP  ++  P +G +    +  ++AGY +  A+    S   +Y+ G G  G+L
Sbjct: 460 HGDVATHKEPKLIQ-GPFIGKV----IELVSAGYRHSAAVT---SDGQLYTWGEGDHGRL 511

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGN 295
           GHG       P L++    L+  PV  VA G+ H     +DG  V ++G G  G LGHGN
Sbjct: 512 GHGDCNPRFIPTLVKS---LSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGN 568

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
                 P+ ++ L   K   VA G + +  ++  G+V+++G G +          G G+ 
Sbjct: 569 TIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNL---------GCGSS 619

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              + +P +V  L Q  + ++ IS+ +S     H  ALT +  +YA+G+  KGQ G
Sbjct: 620 EITLFSPAVVEDLMQ--QMIIDISVGDS-----HCLALTRNCAVYAWGSNGKGQCG 668



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 33/350 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-G 105
           Q  AG   +  + +KG V + G NS G+LG G +  +  P+ I     I+ + ++ G  G
Sbjct: 377 QVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDG 436

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL---KNIFVVQAAIGNFFTA 162
            ++ +SD G+VY++G   +G+  +G   T     P+L++     K I +V A  G   +A
Sbjct: 437 HSLALSDTGEVYSWGDGDYGKLGHGDVATH--KEPKLIQGPFIGKVIELVSA--GYRHSA 492

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPVVQIAAGYCYLLALAC 219
            ++ +G++YT+  G+  RLGH     D  P     L+ +L ++PV  +A G  +   LAC
Sbjct: 493 AVTSDGQLYTWGEGDHGRLGH----GDCNPRFIPTLVKSLSDMPVGYVACGSTH--TLAC 546

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              G  V+S G G  GKLGHG+      P+ IE  +   ++   VAAG   +  +   G 
Sbjct: 547 SRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKK--VAAGIHFSVALTCTGE 604

Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           V TWG G    LG G+ E     P VV+ L     I ++ GD     ++ +  VY++G  
Sbjct: 605 VFTWGQG--SNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSN 662

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYW 386
                       GQG+  + V  P  V +L  KQ+N+  +    ++S+ W
Sbjct: 663 GKGQC-------GQGHSTSPVSRPSKVINLEGKQINQ--ISAGTSHSVAW 703



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 153/357 (42%), Gaps = 36/357 (10%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
            + + G   +  +TS+G V S G  + G+LGHG ++       I +LQG  I Q +     
Sbjct: 3430 RIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGS 3489

Query: 105  -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G ++ +++ G+V+++G   FG+  +G    +    P+L+ESL ++ V+Q A G+  +AV
Sbjct: 3490 DGHSLALTETGEVFSWGDGDFGKLGHG--NNERQRKPKLIESLYDVVVIQVACGHKHSAV 3547

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            LS++G VY F      +LG     N   P  +           +  G+  +  +AC  + 
Sbjct: 3548 LSQDGEVYVFGSAEHGKLGLGGHINKKRPTKI-----------VHKGFLNIKYIACGQNH 3596

Query: 224  M------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                    V++ G G GGKLG GS+ D   P+ I      N++      G      + +D
Sbjct: 3597 TICIGENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNG--FTMFLSED 3654

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG- 336
            G + + G              + +P+ +          VATG     V++  G V+++G 
Sbjct: 3655 GELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGN 3714

Query: 337  -CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
             C      GH+            V  P ++  L   N + +  S T+   W A  F+
Sbjct: 3715 NCEGILGFGHD----------LPVQKPMIIQILSDKNIKQIATSRTHCAAWTAEPFS 3761



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 15/277 (5%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            S +I   GHS+A+T  G V+S+G    G+LGHG  E + +P+ I SL  + +IQ A G  
Sbjct: 3484 STSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHK 3543

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             + ++S  G+VY FG    G+   G    K   +  + +   NI  +  A G   T  + 
Sbjct: 3544 HSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYI--ACGQNHTICIG 3601

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 223
             E  V+ F  G   +LG  ++ +   P  ++ TL  +NI       G+   L+       
Sbjct: 3602 -ENVVWAFGEGEGGKLGIGSKKDIYVPQEII-TLNGKNIKKAYCGNGFTMFLS-----ED 3654

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
              +YS G            T++  P  I +FQ    Q V  VA G  H  V+   G V  
Sbjct: 3655 GELYSCGSDNLQDATDVLYTEKLIPEKIFEFQ---GQIVTDVATGPDHVLVLTARGHVWA 3711

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            WG    G LG G++     P ++Q L+D     +AT 
Sbjct: 3712 WGNNCEGILGFGHDLPVQKPMIIQILSDKNIKQIATS 3748



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 225  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 283
             V S G G  G+LGHG      +  +I   Q   +  V  + G+  H+  + + G V +W
Sbjct: 3446 TVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW 3505

Query: 284  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
            G G +G LGHGN E +  PK++++L DV  I VA G   + V+S+DG+VY FG  E   L
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKL 3565

Query: 344  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
            G           H N   P  +     +N + +            HT  + E   ++AFG
Sbjct: 3566 GLGG--------HINKKRPTKIVHKGFLNIKYIACG-------QNHTICIGE-NVVWAFG 3609

Query: 404  AGDKGQLGI 412
             G+ G+LGI
Sbjct: 3610 EGEGGKLGI 3618



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 13/258 (5%)

Query: 40  CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRII 98
           C  ++ S +    GHS+A++  G VYS+G    G+LGHG       P+ I+    G  I 
Sbjct: 423 CKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIE 482

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             +AG   +  ++  GQ+Y +G+   G   +G    + +  P LV+SL ++ V   A G+
Sbjct: 483 LVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFI--PTLVKSLSDMPVGYVACGS 540

Query: 159 FFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
             T   SR+G  V++F  G++ +LGH       +P  + G L +  + ++AAG  + +AL
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEG-LRHYKIKKVAAGIHFSVAL 599

Query: 218 ACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            C            G G  LG G S      P ++E   L+    + ++ G  H   + +
Sbjct: 600 TCTGEVFT-----WGQGSNLGCGSSEITLFSPAVVE--DLMQQMIIDISVGDSHCLALTR 652

Query: 277 DGRVCTWGWGRYGCLGHG 294
           +  V  WG    G  G G
Sbjct: 653 NCAVYAWGSNGKGQCGQG 670



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 51  GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++A +  G  V+SFGS  +G+LGHG T   ++P+ I  L+  +I + AAG   ++ 
Sbjct: 539 GSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVA 598

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+V+ +G+ S      G   +++ + SP +VE L    ++  ++G+     L+R  
Sbjct: 599 LTCTGEVFTWGQGS----NLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNC 654

Query: 169 RVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            VY  +WG++ +     GH T P    P  ++  LE   + QI+AG  + +A    P
Sbjct: 655 AVY--AWGSNGKGQCGQGHSTSPVS-RPSKVIN-LEGKQINQISAGTSHSVAWTTLP 707



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 22/145 (15%)

Query: 283  WGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG GR G LG     +C ++   ++  N   A  +  G   TFV++  G V S G G   
Sbjct: 3397 WGNGRNGQLGDTAVGQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGNYG 3456

Query: 342  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             LGH     G  +   N+    ++++L    +  V   ++ SI  + H+ ALTE+G++++
Sbjct: 3457 RLGH-----GHSDSLPNL---TMISAL----QGFVITQVSTSIGSDGHSLALTETGEVFS 3504

Query: 402  FGAGDKGQLGIELVNNQTERGNPER 426
            +G GD G+LG          GN ER
Sbjct: 3505 WGDGDFGKLG---------HGNNER 3520


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 27/351 (7%)

Query: 16  RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI------AGPGHSIAVT 59
            ++L   CG S K V      L+ L  G+    + C  E  Q I         G+ +  T
Sbjct: 2   EEELPLFCGDSDKSVQATVPSLKMLDVGKWPIFSLCSEEELQVIRQACVFGSAGNEVLYT 61

Query: 60  S-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
           +    ++  G+N SG LG G  +    PR + SL   +I   + G+G   +L +  G+V+
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVF 121

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
           ++G +++G+   G     LV S  +  +L N  V + A G++ + VL+ +G V+ + + N
Sbjct: 122 SWGHNAYGQLGNGTINHGLVPS-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNN 180

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+L
Sbjct: 181 SGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQL 237

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G GS  ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+ 
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
            +S P  V    D +  I      +T+   ++ G VY +G C G+S +L H
Sbjct: 296 NQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVTLPH 346



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G    G+LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFSWGHNAYGQLGNGTINHGLVPSHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   +++P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNA 347
           GCLG G+ +    P+ + +L+D K   ++ G     V+ + +G+V+S+G      LG+  
Sbjct: 76  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGT 135

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           I  G        L P  + S    N++V +++       + H+  LT  G+++A+G  + 
Sbjct: 136 INHG--------LVPSHI-STNLSNKQVTEVACG-----SYHSLVLTSDGEVFAWGYNNS 181

Query: 408 GQLGIELVNNQTERGNPERV 427
           GQ+G     NQ     P RV
Sbjct: 182 GQVGSGSTANQ---AIPRRV 198


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 177/396 (44%), Gaps = 42/396 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +   GP  +  + S   V+ +GS     LG     +   PR + S + + +   A G   
Sbjct: 216 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 274

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             +I+  G+VY +G  S G  +  V      + P++VESL ++ V   A G+  T  ++ 
Sbjct: 275 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 332

Query: 167 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            G +  F WG  A  LG   +    N   PH  LG ++NI V +IA G  +   +    S
Sbjct: 333 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 387

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
              +++ G G  G LGHG       P+ +E  +   ++ V  A G WH A +        
Sbjct: 388 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 445

Query: 275 --GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
                G++ TWG    G LGH + + + +P  V +L     I V+ G   T V++  G V
Sbjct: 446 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 505

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           ++ G      LG N  ADG+     +V  P     LK   E V +IS  +S     H   
Sbjct: 506 FTIGSSRHGQLG-NPKADGESI--CSVEGP-----LK--TEFVREISSGSS-----HVAV 550

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           LT SGK++ +G G +GQLG+    + + R +P  V+
Sbjct: 551 LTMSGKVFTWGKGAEGQLGL---GDYSNRSSPTLVE 583



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q+IA G  H+  +T +G VY++GS SSG+L          P+ + SL  + +   A G+ 
Sbjct: 266 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 325

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            T  I+ +G+++ +G+   G    G+     G       + +  + NI V + A G + T
Sbjct: 326 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 382

Query: 162 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           A+++  G+++T+  G    LGH        P +VE      +L+   V  +A G  +  A
Sbjct: 383 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 436

Query: 217 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
           +           PSG  +++ G    GKLGH  R  +  P  ++     +L  + V+ G 
Sbjct: 437 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 493

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
               V+   G V T G  R+G LG+   + ES+  V   L       +++G     V++ 
Sbjct: 494 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 553

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            G V+++G G    LG   + D     ++N  +P LV +L+
Sbjct: 554 SGKVFTWGKGAEGQLG---LGD-----YSNRSSPTLVEALE 586



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  H+  +TS G ++++G  + G LGHG T+   RP+ + SL+G R+   A G  
Sbjct: 373 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 432

Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            T  I +          +G+++ +G    G+  +  +  KL+  P  V+SL    ++Q +
Sbjct: 433 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 490

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   T VL+  G V+T       +LG + + +      + G L+   V +I++G  ++ 
Sbjct: 491 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 549

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
            L    SG  V++ G G  G+LG G  ++   P L+E  +  +++ VV      AA   H
Sbjct: 550 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 606

Query: 271 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
             +  +D  VC+     +G+ R  + C   G+  C S
Sbjct: 607 KTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSS 643


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 166/364 (45%), Gaps = 39/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS+AV   G V+++G N SGQLG GTT +   P  +  L G  ++  AAG+  ++ 
Sbjct: 189 AGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSG--VVAVAAGSSHSLA 246

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G++S G+   G    +L  +P  V  L     V A  G F +  +  +G 
Sbjct: 247 VRSDGTVWAWGRNSDGQLGDGTTSARL--TPVQVTGLSGGVAVAA--GMFHSLAVRSDGT 302

Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG + R  LG  +    + P   +G  E   V   AAG  +  +L  +  G  V+
Sbjct: 303 VW--AWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETH--SLVARSDGT-VW 354

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G  + G+ G GS      P  +            VAAG  HA  V  DG V  WG   
Sbjct: 355 AWGNNIEGQRGDGSAKTSTAPVQVTALS----GGFTVAAGKAHALAVRSDGTVWAWGQNL 410

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G LG G     + P  V  L+    + VA GD  +  +  DG V+++G   S  LG   
Sbjct: 411 FGQLGDGTRMQRTAPVQVTGLS--GGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGT 468

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            A     R A    P  VT L      VV ++   S     H+ A++  G ++A+G+   
Sbjct: 469 TA----QRPA----PVQVTELSG----VVAVAAGTS-----HSLAVSSDGTVWAWGSNAS 511

Query: 408 GQLG 411
           GQLG
Sbjct: 512 GQLG 515



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 161/375 (42%), Gaps = 37/375 (9%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA      S+  AG  HS+A+   G V++ GSN+SGQLG GTT E   P  +  L    +
Sbjct: 27  EAGADEGKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVL 86

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +  AAG+  ++ I   G  +A+G +  GE   G   T   T P  V  L     V A  G
Sbjct: 87  V--AAGSSHSLAIRSDGTAWAWGHNGSGELGDGT--TFRRTRPVQVTGLSEAEAVAA--G 140

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +  + V+  +G V+ + W +D +LG  T      P  + G       V++AAG  + LA+
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGG---VKVAAGDGHSLAV 197

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
               +   V++ G    G+LG G+      P      Q+  L  VV VAAG+ H+  V  
Sbjct: 198 CLDGT---VWAWGRNDSGQLGDGTTVQRSAP-----VQVAGLSGVVAVAAGSSHSLAVRS 249

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           DG V  WG    G LG G       P  V  L+    + VA G + +  V  DG V+++G
Sbjct: 250 DGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLS--GGVAVAAGMFHSLAVRSDGTVWAWG 307

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                 LG  ++           LTP     L +  E V             H+      
Sbjct: 308 QNTRGQLGDGSM--------TASLTPVQAIGLSE-GEAVAAG--------ETHSLVARSD 350

Query: 397 GKLYAFGAGDKGQLG 411
           G ++A+G   +GQ G
Sbjct: 351 GTVWAWGNNIEGQRG 365



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 162/369 (43%), Gaps = 37/369 (10%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E     AG GHS+ V S G V+++G NS GQLG GTT E   P  +  L G   ++ AAG
Sbjct: 133 EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSG--GVKVAAG 190

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
            G ++ +   G V+A+G++  G+   G   T   ++P  V  L  +  V A  G+  +  
Sbjct: 191 DGHSLAVCLDGTVWAWGRNDSGQLGDGT--TVQRSAPVQVAGLSGVVAVAA--GSSHSLA 246

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +  +G V+ +   +D +LG  T    + P  + G    + V   AAG  + LA+    + 
Sbjct: 247 VRSDGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLSGGVAV---AAGMFHSLAVRSDGT- 302

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCT 282
             V++ G    G+LG GS T    P      Q + L +   VAAG  H+ V   DG V  
Sbjct: 303 --VWAWGQNTRGQLGDGSMTASLTP-----VQAIGLSEGEAVAAGETHSLVARSDGTVWA 355

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G  G G+ +  + P  V AL+      VA G      V  DG V+++G      
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALS--GGFTVAAGKAHALAVRSDGTVWAWGQNLFGQ 413

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           L       G G R      P  VT L       V ++  +      H+  L   G ++A+
Sbjct: 414 L-------GDGTRMQRT-APVQVTGLSG----GVAVAAGDD-----HSLGLCLDGTVWAW 456

Query: 403 GAGDKGQLG 411
           G    GQLG
Sbjct: 457 GQNTSGQLG 465



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 161/366 (43%), Gaps = 43/366 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AV S G V+++G N  GQLG GT  +   P  +  L G   +  AAG   ++ 
Sbjct: 389 AGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGG--VAVAAGDDHSLG 446

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G+++ G+   G    +    P  V+  +   VV  A G   +  +S +G 
Sbjct: 447 LCLDGTVWAWGQNTSGQLGDGTTAQR----PAPVQVTELSGVVAVAAGTSHSLAVSSDGT 502

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++A  +LG  T    + P  + G      VV +AAGY + LA+    +   V+
Sbjct: 503 VW--AWGSNASGQLGDGTTRARLTPVQVAGL---SGVVAVAAGYFHSLAVRSDGT---VW 554

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G     +LG G+ T    P  +          V  AAG +H+ V+  DG V  WGWG 
Sbjct: 555 AWGNNSFFQLGDGTNTQRPTPVRVPGLS----GGVAAAAGYFHSLVLRSDGTV--WGWGN 608

Query: 288 --YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             YG LG+G       P  V  L+    + VA GD+ +  V  DG V ++G      LG 
Sbjct: 609 NAYGQLGNGTANASFSPVQVTGLS--GGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGD 666

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
             +         N L+  +  +                   N  + A+   G L+A+G  
Sbjct: 667 GTVTTRLAPVGVNGLSGGMAVAAG-----------------NGFSLAVHSGGMLHAWGYN 709

Query: 406 DKGQLG 411
             GQLG
Sbjct: 710 TDGQLG 715



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 156/373 (41%), Gaps = 47/373 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA---AAGAGR 106
           AG  HS+AV S G V+++G N+ GQLG G+      P     +Q I + +    AAG   
Sbjct: 289 AGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTP-----VQAIGLSEGEAVAAGETH 343

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +++    G V+A+G +   E + G    K  T+P  V +L   F V A  G      +  
Sbjct: 344 SLVARSDGTVWAWGNNI--EGQRGDGSAKTSTAPVQVTALSGGFTVAA--GKAHALAVRS 399

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G V+  +WG +   +LG  T      P  + G    + V   AAG  + L L    +  
Sbjct: 400 DGTVW--AWGQNLFGQLGDGTRMQRTAPVQVTGLSGGVAV---AAGDDHSLGLCLDGT-- 452

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
            V++ G    G+LG G+      P      Q+  L  VV VAAG  H+  V  DG V  W
Sbjct: 453 -VWAWGQNTSGQLGDGTTAQRPAP-----VQVTELSGVVAVAAGTSHSLAVSSDGTVWAW 506

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G    G LG G       P  V  L+ V  + VA G + +  V  DG V+++G      L
Sbjct: 507 GSNASGQLGDGTTRARLTPVQVAGLSGV--VAVAAGYFHSLAVRSDGTVWAWGNNSFFQL 564

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G     DG   +     TP  V  L         ++     +   H+  L   G ++ +G
Sbjct: 565 G-----DGTNTQRP---TPVRVPGLSG------GVAAAAGYF---HSLVLRSDGTVWGWG 607

Query: 404 AGDKGQLGIELVN 416
               GQLG    N
Sbjct: 608 NNAYGQLGNGTAN 620



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV+S G V+++GSN+SGQLG GTT     P  +  L G  ++  AAG   ++ 
Sbjct: 489 AGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLA 546

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +SF +   G    +   +P  V  L     V AA G F + VL  +G 
Sbjct: 547 VRSDGTVWAWGNNSFFQLGDGTNTQR--PTPVRVPGLSG--GVAAAAGYFHSLVLRSDGT 602

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+   WGN+A  +LG+ T      P  + G    + V   AAG    LA+    +   V 
Sbjct: 603 VW--GWGNNAYGQLGNGTANASFSPVQVTGLSGGVAV---AAGDFQSLAVRSDGT---VR 654

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G  + G+LG G+ T    P  +          + VAAG   +  V   G +  WG+  
Sbjct: 655 AWGDNIYGQLGDGTVTTRLAPVGVNGLS----GGMAVAAGNGFSLAVHSGGMLHAWGYNT 710

Query: 288 YGCLGHGNEEC 298
            G LGHG    
Sbjct: 711 DGQLGHGGPSV 721



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           A AG  HS+ + S G V+ +G+N+ GQLG+GT    + P  +  L G   +  AAG  ++
Sbjct: 587 AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLSG--GVAVAAGDFQS 644

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + +   G V A+G + +G+   G   T+L  +P  V  L     V A  GN F+  +   
Sbjct: 645 LAVRSDGTVRAWGDNIYGQLGDGTVTTRL--APVGVNGLSGGMAVAA--GNGFSLAVHSG 700

Query: 168 GRVYTFSWGNDARLGH 183
           G ++ + +  D +LGH
Sbjct: 701 GMLHAWGYNTDGQLGH 716


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 163/352 (46%), Gaps = 34/352 (9%)

Query: 63  VVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           V+ +FG+   G+LGH      E  PR +R+L G+ +   A G   T  + D+G VY +G 
Sbjct: 4   VLATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGL 63

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           +  G+  +  + ++ V  P  V   + +  + A  G + T  +   G V++F      +L
Sbjct: 64  NDKGQLGHDSEDSE-VGLPGEVAMPERVVALSA--GYYHTLCVGESGSVWSFGCNGKGQL 120

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G   +   V    L+ +L++  VV +AAG  + LAL    +G  VYS G    G+LGHGS
Sbjct: 121 GLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT---AGGEVYSWGNAANGRLGHGS 177

Query: 242 RTD--------EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            T         E  PRL+  F+ L ++   V+AG  H+A V   G    WG+G++  LG 
Sbjct: 178 ATPRRLFGSSIEFLPRLVRAFEALRVEQ--VSAGQMHSAAVSTAGDAFLWGYGKFHQLGF 235

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G++E  + P V+  L    A  VA G   +  +   G V ++G  ++  LG         
Sbjct: 236 GSDEDLAGPTVLPPLKGSTAA-VACGSLHSLALQYGGHVLAWGTNQNGVLGQG------- 287

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
             H     P+  + +  V+   +         W  H+ A+T SGKLY +G G
Sbjct: 288 --HEKQQQPKRPSKVPGVSAEQIAAG------WK-HSAAVTGSGKLYTWGWG 330



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 21/304 (6%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +A+A G  H+ AV   G VY++G N  GQLGH + + E    P       R++  +AG  
Sbjct: 40  KAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSE-VGLPGEVAMPERVVALSAGYY 98

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ + ++G V++FG +  G+   G +   LV  P+LV+SL++  VV  A G   +  L+
Sbjct: 99  HTLCVGESGSVWSFGCNGKGQLGLG-KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT 157

Query: 166 REGRVYTFSWGNDA--RLGHHTEP------NDVEPHP-LLGTLENIPVVQIAAGYCYLLA 216
             G VY  SWGN A  RLGH +        + +E  P L+   E + V Q++AG  +  A
Sbjct: 158 AGGEVY--SWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAA 215

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           ++        +  G G   +LG GS  D   P ++     L      VA G+ H+  +  
Sbjct: 216 VSTAGD---AFLWGYGKFHQLGFGSDEDLAGPTVLPP---LKGSTAAVACGSLHSLALQY 269

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G V  WG  + G LG G+E+ +  PK    +  V A  +A G   +  V+  G +Y++G
Sbjct: 270 GGHVLAWGTNQNGVLGQGHEK-QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWG 328

Query: 337 CGES 340
            G S
Sbjct: 329 WGGS 332



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 36/323 (11%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQ 93
           L GE           AG  H++ V   G V+SFG N  GQLG G      R PR ++SLQ
Sbjct: 80  LPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQ 139

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------VQGTKLVTSPQLVESLK 147
             +++  AAG   ++ ++  G+VY++G  + G   +G      + G+ +   P+LV + +
Sbjct: 140 DNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFE 199

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
            + V Q + G   +A +S  G  + + +G   +LG  ++ +   P    PL G+      
Sbjct: 200 ALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGS-----T 254

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             +A G  + LAL     G  V + G    G LG G    EK  +     ++  +    +
Sbjct: 255 AAVACGSLHSLALQY---GGHVLAWGTNQNGVLGQG---HEKQQQPKRPSKVPGVSAEQI 308

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRY--------------GCLGHGNEECESVPKVVQALND 310
           AAG  H+A V   G++ TWGWG                G LGHGN+     P  V  L+ 
Sbjct: 309 AAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSL 368

Query: 311 VKAIHVATG-DYTTFVVSEDGDV 332
            +   VA G ++T  +V  D  V
Sbjct: 369 TETDLVACGMNHTAAIVELDSGV 391



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 135/302 (44%), Gaps = 36/302 (11%)

Query: 123 SFGEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +FG  + G  G  L  +    P++V +L  + +   A G   TA +   G VYT+   + 
Sbjct: 7   TFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDK 66

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LGH +E ++V     +   E   VV ++AGY + L   C     +V+S GC   G+LG
Sbjct: 67  GQLGHDSEDSEVGLPGEVAMPER--VVALSAGYYHTL---CVGESGSVWSFGCNGKGQLG 121

Query: 239 HGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-- 295
            G      + PRL++  Q  + + V VAAG  H+  +   G V +WG    G LGHG+  
Sbjct: 122 LGKDVVLVREPRLVKSLQ--DNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSAT 179

Query: 296 ------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
                    E +P++V+A   ++   V+ G   +  VS  GD + +G G+   LG  +  
Sbjct: 180 PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDE 239

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           D  G        P ++  LK     V   SL        H+ AL   G + A+G    G 
Sbjct: 240 DLAG--------PTVLPPLKGSTAAVACGSL--------HSLALQYGGHVLAWGTNQNGV 283

Query: 410 LG 411
           LG
Sbjct: 284 LG 285



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 17/134 (12%)

Query: 280 VCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           + T+G G  G LGH  E   E +P+VV+AL  V    VA G   T  V + G VY++G  
Sbjct: 5   LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLN 64

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
           +   LGH++  D +      V  P          ERVV +S   + Y+  HT  + ESG 
Sbjct: 65  DKGQLGHDS-EDSEVGLPGEVAMP----------ERVVALS---AGYY--HTLCVGESGS 108

Query: 399 LYAFGAGDKGQLGI 412
           +++FG   KGQLG+
Sbjct: 109 VWSFGCNGKGQLGL 122


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 168/373 (45%), Gaps = 40/373 (10%)

Query: 46  SQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           S    G  H++AV  +   V S+G N  GQLG G       P PI  L     +  AAG+
Sbjct: 141 SMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAGS 200

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             + ++S  G++++FG  +FG   +G +      +P+ + +L    +V  A G   +A +
Sbjct: 201 QHSFVLSKFGELFSFGCGTFGRLGHGNELPSF--NPRPISTLVGKHIVSVAAGLMHSAAV 258

Query: 165 SREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
             +G +YT+ W    +LG      HT PN  +       LE   +V++  G  + L L  
Sbjct: 259 DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNK------ELERFNIVKVVCGKNHTLVLDV 312

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
                 VYS G  + G+LG GS TD   P  I+     N + + +AAG +H  ++ + G 
Sbjct: 313 NGH---VYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGC 369

Query: 280 VCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           V ++G+   G LG G+    +S PK++               +     ++  D Y    G
Sbjct: 370 VYSFGYISDGALGLGDVVGHQSRPKLMPF------------SHFNHEFNDSIDSYKEIYG 417

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
           E  S   N I     N +   L P++V    ++ +  V+I+      W  H+  +T SG+
Sbjct: 418 EYNSDSENDI-----NNNNAKLPPKVVELHNEIGDVAVKIAAGG---W--HSAIITSSGR 467

Query: 399 LYAFGAGDKGQLG 411
           LY FG GD  +LG
Sbjct: 468 LYTFGLGDNFRLG 480



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 50/302 (16%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS  ++  G ++SFG  + G+LGHG     + PRPI +L G  I+  AAG   +  
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G +Y +G + +G+   G+   K  T P   + L+   +V+   G   T VL   G 
Sbjct: 258 VDSQGALYTWGWNRYGQ--LGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGH 315

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           VY+F +    +LG  +  + ++P+ + L   +N  ++ IAAGY ++L L  +     VYS
Sbjct: 316 VYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKG---CVYS 372

Query: 229 VG------CGLGGKLGHGSR----------------------------TDEKH------- 247
            G       GLG  +GH SR                            +D ++       
Sbjct: 373 FGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNA 432

Query: 248 ---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
              P+++E    +    V +AAG WH+A++   GR+ T+G G    LG+  +E + +P +
Sbjct: 433 KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMPCI 492

Query: 305 VQ 306
           V 
Sbjct: 493 VN 494



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 26/280 (9%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 192
           ++  P L++  + + V   A G+    AVL  +  V   SWG +   +LG   + N   P
Sbjct: 127 IIKLPTLIK--QGLIVSMIACGDSHALAVLPNDATV--LSWGCNRWGQLGLGDQVNRCHP 182

Query: 193 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            P+ G  ++IPV  +AAG  +   L+       ++S GCG  G+LGHG+     +PR I 
Sbjct: 183 TPISGLSQSIPVF-VAAGSQHSFVLS---KFGELFSFGCGTFGRLGHGNELPSFNPRPIS 238

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L+    V VAAG  H+A V   G + TWGW RYG LG G  +  ++P   + L    
Sbjct: 239 T--LVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFN 296

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + V  G   T V+  +G VYSFG      LG  +  D       ++   ++   LKQ N
Sbjct: 297 IVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTD-------SIKPNRIDLDLKQ-N 348

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           + ++ I+   + Y+  H   LT+ G +Y+FG    G LG+
Sbjct: 349 DEIIDIA---AGYY--HVLLLTKKGCVYSFGYISDGALGL 383


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 175/377 (46%), Gaps = 22/377 (5%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHS--IAVTSK 61
           K+ +F+P+ +A    LK    G W +   F L  EA  +      + G   +  +  T  
Sbjct: 2   KKILFQPV-QATLSSLKMLDVGKWPI---FSLCSEAELQLVRQACVFGSASNELLYTTVN 57

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
             ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G
Sbjct: 58  DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWG 117

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  +
Sbjct: 118 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 176

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           +G  +  N   P  + G L++  VV IA G   + ++A   +G  V+  G    G+LG G
Sbjct: 177 VGSGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLG 233

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           S  ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S
Sbjct: 234 SSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 291

Query: 301 VPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGN 354
            P  V    D    + A H A   +T+   ++ G VY +G C G+S +L H        +
Sbjct: 292 YPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDD 348

Query: 355 RHANVLTPQLVTSLKQV 371
             A   TP +   L  V
Sbjct: 349 VFACFATPAVTWRLLSV 365



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 113 VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 171

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L     +++A G   +  V   G+V+ +G   +  LG
Sbjct: 172 NNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 231

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 232 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 276

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 277 NSYGQLGTGNKSNQS 291


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 185/406 (45%), Gaps = 68/406 (16%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---------------------- 83
           +Q   G  HS+A+TS G V+++G N + QLG   +E                        
Sbjct: 176 TQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDE 235

Query: 84  ------------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
                        RPR +R+L G +I+Q   GA  ++++S+ G V+A+G ++ G  +  +
Sbjct: 236 LDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSG--QLCL 293

Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND 189
           +  K V  P LV+ L  I + Q A G   T  L+  G+VY  SWGN+   +LG      D
Sbjct: 294 RELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVY--SWGNNQFGQLG----VGD 347

Query: 190 VEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
             PH +   L TLE+     IA G  + + L        VYS G G  G+LGHG+  +E 
Sbjct: 348 TAPHTIPSRLKTLEHQFCAHIACGEDHSVVLT---ETGGVYSFGAGGQGQLGHGTLQNEI 404

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHG----NEECESV 301
           +PR+I  F+L+      V  G  H  V   +  ++  +G G  G LG G     ++    
Sbjct: 405 NPRMI--FELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLT 462

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P +V+ L+    + +ATG   +   +  G+    G  ESA L  +A    Q ++   VLT
Sbjct: 463 PMLVRVLDATPILRIATGASASHCFAVVGNRNHVGAAESAQLPWDA-RHRQASQSPLVLT 521

Query: 362 PQLVTSL-------KQVN--ERVVQISLTNSIYWNAHTFALTESGK 398
             LV  L       K V+   R +Q++L+++   N  +F   E G+
Sbjct: 522 LPLVRKLLADAAASKDVSALTRTLQVALSSASCLNG-SFLAHEPGQ 566



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 170/401 (42%), Gaps = 58/401 (14%)

Query: 46  SQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           + AIA G  H++ +   G VYS GSN  GQLGH   +   +P  + +L+   I Q A G 
Sbjct: 126 ASAIACGRAHTLFLV-DGQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGE 182

Query: 105 GRTMLISDAGQVYAFGK-------------------------------DSFGEAEYGVQG 133
             ++ ++  GQV+A+G                                D   E +     
Sbjct: 183 THSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLA 242

Query: 134 -TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
               +T P+LV +L    +VQ   G  F+ VLS  G V  F+WG++             P
Sbjct: 243 YMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDV--FAWGDNTSGQLCLRELKTVP 300

Query: 193 HP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
            P L+  L  IP+ Q+AAG  + LAL        VYS G    G+LG G       P   
Sbjct: 301 VPTLVKELYGIPIRQLAAGGRHTLALTFNGQ---VYSWGNNQFGQLGVGDTAPHTIP--- 354

Query: 252 EQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            + + L  Q    +A G  H+ V+ + G V ++G G  G LGHG  + E  P+++  L  
Sbjct: 355 SRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMG 414

Query: 311 VKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
             A  V  G   T V   +   +Y+FG G +  LG     + Q     +VLTP LV  L 
Sbjct: 415 KSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQ----QHVLTPMLVRVLD 470

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                +++I+   S    +H FA+   G     GA +  QL
Sbjct: 471 ATP--ILRIATGASA---SHCFAVV--GNRNHVGAAESAQL 504



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 155/374 (41%), Gaps = 55/374 (14%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRI--IQAAAGAGR--TMLISDA 113
           G V+++G+ + GQLG   T +       P  + +   + +  + +A   GR  T+ + D 
Sbjct: 83  GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD- 141

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           GQVY+ G +  G+  +    +K    P+ V++L+   + Q A G   +  L+  G+V  F
Sbjct: 142 GQVYSCGSNDQGQLGHKKHRSK----PERVDALEPYTITQIACGETHSLALTSNGQV--F 195

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
           +WG++        P++    P   T  + P    A             S   V  +    
Sbjct: 196 AWGDNKASQLGLTPSESSRQP--STRSSAPKTAAA-------------SIDDVDELDAAT 240

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
              +   +R     PRL+    L   + V +  GA  + V+ + G V  WG    G L  
Sbjct: 241 LAYMDFMTR-----PRLVRA--LTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCL 293

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
              +   VP +V+ L  +    +A G   T  ++ +G VYS+G  +   LG        G
Sbjct: 294 RELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLG-------VG 346

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
           +   + +  +L T   Q    +             H+  LTE+G +Y+FGAG +GQLG  
Sbjct: 347 DTAPHTIPSRLKTLEHQFCAHIA--------CGEDHSVVLTETGGVYSFGAGGQGQLGHG 398

Query: 414 LVNNQTERGNPERV 427
            + N+    NP  +
Sbjct: 399 TLQNEI---NPRMI 409



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 35/156 (22%)

Query: 268 AWHAAVVGQDGRVCTWGWGRY--GCLGH--GNEECESVPKV--VQALNDVKAIHVATG-- 319
           A HA + G       W WG    G LG    N+   +VP+   ++A + V    +A+   
Sbjct: 76  AAHAQLAGS-----VWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIA 130

Query: 320 ---DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
               +T F+V  DG VYS G  +   LGH         +H +   P+ V +L+     + 
Sbjct: 131 CGRAHTLFLV--DGQVYSCGSNDQGQLGHK--------KHRS--KPERVDALEPYT--IT 176

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           QI+   +     H+ ALT +G+++A+G     QLG+
Sbjct: 177 QIACGET-----HSLALTSNGQVFAWGDNKASQLGL 207


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 167/354 (47%), Gaps = 32/354 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           ++ +GS   G+LG G  E+E  + PR +   +   + Q A G   T+ I++ GQVY+ G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 180
           + +G+  +     +L    QL+  L      + A G+  T  ++  G++  FSWG + + 
Sbjct: 61  NDYGQLGHEKARKRL----QLIPGLDAFVFKKIACGSCHTLAVNEWGQL--FSWGCNMKG 114

Query: 181 -LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            LG ++         ++  L    +VQIA G  + +AL    +   +YS G    G+LG 
Sbjct: 115 QLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT---NDGELYSWGSNREGQLGI 171

Query: 240 GSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           GS T  E  P+ I    L  +    +A G +H  V+ + G V  WG   +G LG  + + 
Sbjct: 172 GSHTVTEIKPKRI--ITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQ 229

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             VP  ++ L + K  + A G+  +  ++ DG V++ G G    LGH     G G    N
Sbjct: 230 RIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGH-----GNG---MN 281

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
            + P+ V  L  +   V QIS         HT AL  S G++YA+G G  GQLG
Sbjct: 282 EILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSRGRVYAWGLGGAGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 6/206 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HSIA+T+ G +YS+GSN  GQLG G+ T  E +P+ I +L  + I   A G  
Sbjct: 141 QIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGY 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T++IS +G V+A+G+++FG+   G+  T+    P  + +L+N  V  AA G  F+  L+
Sbjct: 201 HTVVISKSGVVFAWGRNTFGQL--GLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G V+T   G   +LGH    N++ P  ++  L    V QI+ G  + LAL   PS   
Sbjct: 259 LDGGVFTCGAGMYGQLGHGNGMNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
           VY+ G G  G+LG+ +      P ++
Sbjct: 316 VYAWGLGGAGQLGNRASRSATTPLVV 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 19/310 (6%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  Q   G  +++ +T+ G VYS G+N  GQLGH    +  R + I  L      + A G
Sbjct: 35  EVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARK--RLQLIPGLDAFVFKKIACG 92

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 162
           +  T+ +++ GQ++++G +  G+   G+        +P++V++L    +VQ A G   + 
Sbjct: 93  SCHTLAVNEWGQLFSWGCNMKGQL--GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSI 150

Query: 163 VLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
            L+ +G +Y  SWG++      +G HT   +++P  ++ TL  +P+  IA G  + + ++
Sbjct: 151 ALTNDGELY--SWGSNREGQLGIGSHT-VTEIKPKRII-TLAAVPIAFIACGGYHTVVIS 206

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              SG+ V++ G    G+LG         P  +    L N +    A G   +  +  DG
Sbjct: 207 --KSGV-VFAWGRNTFGQLGLNDTQQRIVPCQLR--TLRNAKVCYAACGEEFSVFLTLDG 261

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
            V T G G YG LGHGN   E +P+ V  L       ++ G  +T  +V   G VY++G 
Sbjct: 262 GVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGL 321

Query: 338 GESASLGHNA 347
           G +  LG+ A
Sbjct: 322 GGAGQLGNRA 331



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 17/261 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++AV   G ++S+G N  GQLG  + +  E  PR +++L    I+Q A G   ++ 
Sbjct: 92  GSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           +++ G++Y++G +   E + G+ G+  VT   P+ + +L  + +   A G + T V+S+ 
Sbjct: 152 LTNDGELYSWGSNR--EGQLGI-GSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS 208

Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           G V  F+WG +   +LG +     + P  L  TL N  V   A G  + + L        
Sbjct: 209 GVV--FAWGRNTFGQLGLNDTQQRIVPCQL-RTLRNAKVCYAACGEEFSVFLTLDG---G 262

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G G+ G+LGHG+  +E  PR +   +L+      ++ G  H  A+V   GRV  WG
Sbjct: 263 VFTCGAGMYGQLGHGNGMNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRVYAWG 320

Query: 285 WGRYGCLGHGNEECESVPKVV 305
            G  G LG+      + P VV
Sbjct: 321 LGGAGQLGNRASRSATTPLVV 341



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 25/222 (11%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V QIA G  Y + +    +   VYS G    G+LGH      K  +LI        + + 
Sbjct: 36  VEQIACGENYTVTIT---NDGQVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKI- 89

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYT 322
            A G+ H   V + G++ +WG    G LG  + +C E  P++V+AL     + +A G   
Sbjct: 90  -ACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEH 148

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  ++ DG++YS+G      LG        G+     + P+ + +L  V    +      
Sbjct: 149 SIALTNDGELYSWGSNREGQLG-------IGSHTVTEIKPKRIITLAAVPIAFIACG--- 198

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 HT  +++SG ++A+G    GQLG+   N+  +R  P
Sbjct: 199 ----GYHTVVISKSGVVFAWGRNTFGQLGL---NDTQQRIVP 233



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           ++  G  + G+LG G   DE    PR ++  +   ++ +  A G  +   +  DG+V + 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQI--ACGENYTVTITNDGQVYSC 58

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LGH  E+     +++  L+      +A G   T  V+E G ++S+GC     L
Sbjct: 59  GNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G N++   +        TP++V +L      +VQI+         H+ ALT  G+LY++G
Sbjct: 117 GLNSVDCTER-------TPRMVKALG--TSVIVQIACGIE-----HSIALTNDGELYSWG 162

Query: 404 AGDKGQLGI 412
           +  +GQLGI
Sbjct: 163 SNREGQLGI 171



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 3/148 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ ++  GVV+++G N+ GQLG   T++   P  +R+L+  ++  AA G   ++ +
Sbjct: 198 GGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFL 257

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
           +  G V+  G   +G+  +G    +++  P+ V  L    V Q + G   T A++   GR
Sbjct: 258 TLDGGVFTCGAGMYGQLGHGNGMNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGR 315

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           VY +  G   +LG+    +   P  +LG
Sbjct: 316 VYAWGLGGAGQLGNRASRSATTPLVVLG 343



 Score = 44.7 bits (104), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)

Query: 283 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           WG   +G LG G  E E++  P+ V      +   +A G+  T  ++ DG VYS G  + 
Sbjct: 4   WGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH                 QL+  L     + +          + HT A+ E G+L+
Sbjct: 64  GQLGHEKARK----------RLQLIPGLDAFVFKKIACG-------SCHTLAVNEWGQLF 106

Query: 401 AFGAGDKGQLGIELVNNQTER 421
           ++G   KGQLG+  V+  TER
Sbjct: 107 SWGCNMKGQLGLNSVDC-TER 126


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 27/288 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---------GIRIIQA- 100
           G  H+  VT +  V+++G   SG+LGHG     ++PR + SL          G+++++  
Sbjct: 269 GVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLL 328

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   T L + +G++Y FG  +FG   +G + T  ++ P+ VESLK +  +  + G + 
Sbjct: 329 SCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 386

Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           TA +         +  G+++T+  G+  RLGH    + ++P   + +L +    +   G+
Sbjct: 387 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 445

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
              + L    SG  +++ G  + G+LG+ +  D ++PRL+E+ +L     V V  GA+H 
Sbjct: 446 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVVCGAYHV 500

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
           AV+ Q G V TWG G  G LGHG+      P  V+AL D     +A G
Sbjct: 501 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 548



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 37/254 (14%)

Query: 176 GNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           G+D+     T   D+  P PL    E+  ++ ++   C +   A       V++ G    
Sbjct: 235 GSDSNAYSATAATDILVPKPL----ESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECS 290

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQ--PV------VVAAGAWHAAVVGQDGRVCTWGWG 286
           G+LGHG+ T    PRL+E   + N++  PV      +++ G WH A+    G++ T+G G
Sbjct: 291 GRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDG 350

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGC 337
            +G LGHGN E  S PK V++L  ++ I V+ G + T  V E          G ++++G 
Sbjct: 351 TFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGD 410

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G+   LGH       G+R +  L P  V SL       +  +   ++  +  T  LT SG
Sbjct: 411 GDKYRLGH-------GDRSSK-LKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSG 455

Query: 398 KLYAFGAGDKGQLG 411
            ++  G+   GQLG
Sbjct: 456 HIFTAGSSVYGQLG 469



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 38/301 (12%)

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
           Y       +  P+ +ES   + V   A G    A+++R+  V+T  WG +   RLGH   
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFT--WGEECSGRLGHGAG 298

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGMAVYSVGCGLGGKLGH 239
            +  +P  L+ +L    V  +  G   +  L+C       + S   +Y+ G G  G LGH
Sbjct: 299 TSIFQPR-LVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGH 357

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGC 290
           G+R    +P+ +E   L  L+ + V+ G WH A V +          G++ TWG G    
Sbjct: 358 GNRETISYPKEVES--LKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYR 415

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGHG+   +  P  V +L D        G   T  ++  G +++ G      LG N   D
Sbjct: 416 LGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNND 474

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           G+         P+LV       E++    +   +    H   LT+SG++Y +G G  G+L
Sbjct: 475 GR--------YPRLV------EEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRL 520

Query: 411 G 411
           G
Sbjct: 521 G 521



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 33/302 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +   A G     L++   +V+ +G++  G   +G  GT +   P+LVES
Sbjct: 252 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 309

Query: 146 LK--NIFVVQAAI--------GNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDV 190
           L   N+  +   +        G + TA+ +  G++YTF  G    LGH        P +V
Sbjct: 310 LSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEV 369

Query: 191 EPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
           E    L T+  +  V   AA    ++A +   SG  +++ G G   +LGHG R+ +  P 
Sbjct: 370 ESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSG-KLFTWGDGDKYRLGHGDRSSKLKPT 428

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
            +      N    V      H   +G    G + T G   YG LG+ N +      V + 
Sbjct: 429 CVPSLIDYNFHKAVCG----HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEK 484

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
           L     + V  G Y   V+++ G+VY++G G +  LGH  IAD +        TP  V +
Sbjct: 485 LGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRK--------TPTFVEA 536

Query: 368 LK 369
           L+
Sbjct: 537 LR 538


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 26/295 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  HS AVT  G +Y++G  +++SG LGHG+    W P+ +   ++G+ +   A G   T
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHT 411

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ AGQ++ FG  +FG   +G   +  ++ P+ VE+L+    ++ A G + TA +   
Sbjct: 412 AVVTSAGQLFTFGDGTFGALGHGDHSS--MSIPREVEALRGQRTMRVACGVWHTAAVVEL 469

Query: 165 ------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
                       S  G+++T+  G+  RLGH  +   + P  +   L N    Q+A G+ 
Sbjct: 470 MIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTA-LINESFCQVACGHN 528

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
             L++A   SG  VY++G  + G+LG     D K P L+E  ++ N     VA G++H A
Sbjct: 529 --LSVALTTSGR-VYTMGSAVYGQLG-SPVADGKIPTLVEG-KIANSFVEEVACGSYHVA 583

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           V+     V TWG G  G LGHG+ +  + P +V  L D +  +V  G   T  +S
Sbjct: 584 VLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 173/385 (44%), Gaps = 52/385 (13%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V+  GS+SS ++      +   P+ + S   + +   A G    +L++  G+V+++G++ 
Sbjct: 267 VHRVGSSSSTKI------DALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDA 179
                +GV+    V+ P+L+++L  + +   A G + +  ++  G +YT  WG    N  
Sbjct: 321 GSRLGHGVEVD--VSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYT--WGDGTHNSG 376

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            LGH +E +   P  + G +E + V  +A G  +   +    S   +++ G G  G LGH
Sbjct: 377 LLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVT---SAGQLFTFGDGTFGALGH 433

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------------DGRVCTWG 284
           G  +    PR +E   L   + + VA G WH A V +                G++ TWG
Sbjct: 434 GDHSSMSIPREVE--ALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWG 491

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
            G  G LGHG++E   VP+ V AL +     VA G   +  ++  G VY+ G      LG
Sbjct: 492 DGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLG 551

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
            + +ADG+         P LV   K  N  V +++       + H   LT   ++Y +G 
Sbjct: 552 -SPVADGK--------IPTLVEG-KIANSFVEEVACG-----SYHVAVLTSKTEVYTWGK 596

Query: 405 GDKGQLGIELVNNQTERGNPERVDI 429
           G  GQLG     +   R  P  VD 
Sbjct: 597 GTNGQLGH---GDNDHRNTPTLVDF 618



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 165/359 (45%), Gaps = 46/359 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT KG V+S+G     +LGHG   +   P+ I +L G+ I   A G   +  +
Sbjct: 300 GGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAV 359

Query: 111 SDAGQVYAFGKDSF--GEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
           + +G +Y +G  +   G   +G + +  +  P+ V   ++ + V   A G + TAV++  
Sbjct: 360 TLSGDLYTWGDGTHNSGLLGHGSEASHWI--PKKVSGPMEGMHVSYVACGPWHTAVVTSA 417

Query: 168 GRVYTFSWGNDARLGH--HTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA---- 218
           G+++TF  G    LGH  H+    P +VE       L     +++A G  +  A+     
Sbjct: 418 GQLFTFGDGTFGALGHGDHSSMSIPREVE------ALRGQRTMRVACGVWHTAAVVELMI 471

Query: 219 --------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGA 268
                      S   +++ G G  G+LGHG    +K PRL+ Q    L+N     VA G 
Sbjct: 472 ASSSFESSGSSSSGKLFTWGDGDKGRLGHG----DKEPRLVPQSVTALINESFCQVACGH 527

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVS 327
             +  +   GRV T G   YG LG    + + +P +V+  + +     VA G Y   V++
Sbjct: 528 NLSVALTTSGRVYTMGSAVYGQLGSPVADGK-IPTLVEGKIANSFVEEVACGSYHVAVLT 586

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSI 384
              +VY++G G +  LGH        N H N  TP LV  L  KQV   V  ++ T +I
Sbjct: 587 SKTEVYTWGKGTNGQLGHG------DNDHRN--TPTLVDFLKDKQVKNVVCGLNFTAAI 637



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 26/259 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG       PR + +L+G R ++ A G   T  +
Sbjct: 407 GPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAV 466

Query: 111 SD---------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            +               +G+++ +G    G   +G +  +LV  PQ V +L N    Q A
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLV--PQSVTALINESFCQVA 524

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G+  +  L+  GRVYT       +LG       + P  + G + N  V ++A G  ++ 
Sbjct: 525 CGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKI-PTLVEGKIANSFVEEVACGSYHVA 583

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
            L    S   VY+ G G  G+LGHG       P L++  +   ++ VV      AA + H
Sbjct: 584 VLT---SKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLH 640

Query: 271 AAVVGQDGRVCTWGWGRYG 289
             V   D  +C+    ++G
Sbjct: 641 KWVSCADHSICSGCHNQFG 659


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 10/291 (3%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
           T    V+  G N SG LG G  +    PR + SL G +I   + G+G   +L ++ G+VY
Sbjct: 38  TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 97

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +++ +   G      V   Q+  +L N  V++ A G+  + VL+ +G VYT+ + N
Sbjct: 98  TWGHNAYSQLGNGTTNHGFVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNN 156

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  +   L+N  VV IA G   + ++A   +G  VY  G    G+L
Sbjct: 157 SGQVGSGSTANQPIPRRVTSCLQNKIVVNIACG--QMCSMAVVENG-EVYVWGYNGNGQL 213

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G GS  ++  P  I   Q + +Q   VA G  H  V+  +G++  WG   YG LG GN+ 
Sbjct: 214 GLGSSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKS 271

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
            +S P  V    D V  I      +T+   ++ G VY +G C G+S +  H
Sbjct: 272 NQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPH 322



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 16/243 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T +G VY++G N+  QLG+GTT   + P  + + L   ++I+ A G+  +M
Sbjct: 83  SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSM 141

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VY +G ++ G+   G    + +  P+ V S L+N  VV  A G   +  +   
Sbjct: 142 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIVVNIACGQMCSMAVVEN 199

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A GY + L L  +     +
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---I 254

Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           Y+ G    G+LG G+++++ +P   ++++ +++    +     A  +A   Q G+V  WG
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIE---IAACHSAHTSAAKTQSGQVYMWG 311

Query: 285 WGR 287
             R
Sbjct: 312 QCR 314



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           +   G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR + S LQ   ++  A G  
Sbjct: 132 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQM 191

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T VL+
Sbjct: 192 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLT 249

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            EG++Y +   +  +LG   + N  + +P    ++   V++IAA
Sbjct: 250 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVVVDKDRVIEIAA 291



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 96  VYTWGHNAYSQLGNGTTNHGFVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 154

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQIYAWGA 259

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V +D
Sbjct: 260 NSYGQLG---TGNKSNQSYPTTVVVD 282



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E+ +L+  Q  V  +         ++  V   G    GCLG G+ +    P+ + +L   
Sbjct: 16  EEIKLIR-QACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGK 74

Query: 312 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 369
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +   +  Q+ T+L 
Sbjct: 75  KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGFVPCQVSTNL- 125

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 126 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 168


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 166/369 (44%), Gaps = 42/369 (11%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           G    +   G +++FG +   + G     + W       ++G +    A G   T L+++
Sbjct: 4   GDDSEIPESGAIFTFGKS---RFGDNLPNKFW-------VRGDKAKSVACGDEHTALVTE 53

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
           +G+++ FG + +G+   G+   K+ T P  V+ LK   V   A G   T V +  G +YT
Sbjct: 54  SGRLFTFGVNDWGQ--LGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYT 111

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F    D +LG    P+     P+    E      +AAG  + +AL        +Y  G G
Sbjct: 112 FGANGDGQLGVEDIPSSN--CPVKVECEPRQYKALAAGADHSVALT---DDGELYVWGGG 166

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G   D+  P L+     +    + VA G +H A V   G V T+G G  G LG
Sbjct: 167 SEGQLGLGDIDDKSTPTLLSTDNKV----ISVACGYYHTAFVTDVGEVFTFGEGDGGKLG 222

Query: 293 HGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G +  ++V PK V      KA  VA G   T V++E G VY+FG G +  LGH      
Sbjct: 223 QGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHK----- 275

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             N++    TP  +        +V QI+   +     HT  +TE G+LY FG G   +LG
Sbjct: 276 --NKYFYCETPVWL----NFKHKVTQIAAGEN-----HTALVTEKGQLYTFGDGRHAKLG 324

Query: 412 I--ELVNNQ 418
           +  E  +NQ
Sbjct: 325 LDHECYSNQ 333



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 20/307 (6%)

Query: 42  RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           R + ++++A G  H+  VT  G +++FG N  GQLG    +   RP  ++ L+  ++   
Sbjct: 34  RGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVV 93

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   T++ +++G +Y FG +  G+ + GV+       P  VE     +   AA G   
Sbjct: 94  ACGRIHTIVATESGCLYTFGAN--GDGQLGVEDIPSSNCPVKVECEPRQYKALAA-GADH 150

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +  L+ +G +Y +  G++ +LG      D +  P L + +N  V+ +A GY Y  A    
Sbjct: 151 SVALTDDGELYVWGGGSEGQLGLGD--IDDKSTPTLLSTDNK-VISVACGY-YHTAFVTD 206

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
                V++ G G GGKLG G+   +   P+ +     +  +   VA G  H  V+ + G+
Sbjct: 207 VG--EVFTFGEGDGGKLGQGTDYGKAVAPKKVN----IPEKAKSVACGGSHTVVLTECGK 260

Query: 280 VCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           V T+G G  G LGH N+   CE+    V      K   +A G+  T +V+E G +Y+FG 
Sbjct: 261 VYTFGEGGNGQLGHKNKYFYCET---PVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGD 317

Query: 338 GESASLG 344
           G  A LG
Sbjct: 318 GRHAKLG 324



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 42/274 (15%)

Query: 40  CC----RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLG-------HGTTEEEWRPR 87
           CC    + E  + +A G  H+I  T  G +Y+FG+N  GQLG       +   + E  PR
Sbjct: 80  CCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPR 139

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
             ++L        AAGA  ++ ++D G++Y +G  S  E + G+      ++P L+ +  
Sbjct: 140 QYKAL--------AAGADHSVALTDDGELYVWGGGS--EGQLGLGDIDDKSTPTLLST-- 187

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-VEPHPLLGTLENIP--V 204
           +  V+  A G + TA ++  G V+TF  G+  +LG  T+    V P  +     NIP   
Sbjct: 188 DNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKV-----NIPEKA 242

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
             +A G  + + L        VY+ G G  G+LGH ++         E    LN +  V 
Sbjct: 243 KSVACGGSHTVVLT---ECGKVYTFGEGGNGQLGHKNKY-----FYCETPVWLNFKHKVT 294

Query: 264 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
            +AAG  H A+V + G++ T+G GR+  LG  +E
Sbjct: 295 QIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 22/249 (8%)

Query: 40  CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 99
           C  R+     AG  HS+A+T  G +Y +G  S GQLG G  +++  P  + +    ++I 
Sbjct: 136 CEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDN--KVIS 193

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ--LVESLKNIFVVQAAIG 157
            A G   T  ++D G+V+ FG+   G+   G    K V   +  + E  K++     A G
Sbjct: 194 VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSV-----ACG 248

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              T VL+  G+VYTF  G + +LGH  +    E  P+    ++  V QIAAG  +  AL
Sbjct: 249 GSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE-TPVWLNFKHK-VTQIAAGENH-TAL 305

Query: 218 ACQPSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
             +   +  Y+ G G   KLG  H   +++  P+  ++F    +    V+ G  H  V+ 
Sbjct: 306 VTEKGQL--YTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIV--TQVSCGGCHMIVLA 361

Query: 276 ----QDGRV 280
               Q+G V
Sbjct: 362 YPRLQNGEV 370



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQT-----ERGNPERVDI 429
           + HT  +TESG+L+ FG  D GQLGI+ V   T     ++  PE+V +
Sbjct: 45  DEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 142/291 (48%), Gaps = 10/291 (3%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
           T    V+  G N SG LG G  +    PR + SL G +I   + G+G   +L ++ G+VY
Sbjct: 43  TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 102

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +++ +   G      V   Q+  +L N  V++ A G+  + VL+ +G VYT+ + N
Sbjct: 103 TWGHNAYSQLGNGTTNHGFVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNN 161

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  +   L+N  VV IA G   + ++A   +G  VY  G    G+L
Sbjct: 162 SGQVGSGSTANQPIPRRVTSCLQNKIVVNIACG--QMCSMAVVENG-EVYVWGYNGNGQL 218

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G GS  ++  P  I   Q + +Q   VA G  H  V+  +G++  WG   YG LG GN+ 
Sbjct: 219 GLGSSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKS 276

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
            +S P  V    D V  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 277 NQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVILPH 327



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 16/243 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T +G VY++G N+  QLG+GTT   + P  + + L   ++I+ A G+  +M
Sbjct: 88  SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSM 146

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VY +G ++ G+   G    + +  P+ V S L+N  VV  A G   +  +   
Sbjct: 147 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIVVNIACGQMCSMAVVEN 204

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A GY + L L  +     +
Sbjct: 205 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---I 259

Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           Y+ G    G+LG G+++++ +P   ++++ +++    +     A  +A   Q G+V  WG
Sbjct: 260 YAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIE---IAACHSAHTSAAKTQSGQVYMWG 316

Query: 285 WGR 287
             R
Sbjct: 317 QCR 319



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           +   G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR + S LQ   ++  A G  
Sbjct: 137 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQM 196

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T VL+
Sbjct: 197 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLT 254

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            EG++Y +   +  +LG   + N  + +P    ++   V++IAA
Sbjct: 255 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVVVDKDRVIEIAA 296



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 101 VYTWGHNAYSQLGNGTTNHGFVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 159

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 160 NNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 219

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 220 LGS----SGNQP----TPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQIYAWGA 264

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V +D
Sbjct: 265 NSYGQLG---TGNKSNQSYPTTVVVD 287



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E+ +L+  Q  V  +         ++  V   G    GCLG G+ +    P+ + +L   
Sbjct: 21  EELKLIR-QACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGK 79

Query: 312 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 369
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +   +  Q+ T+L 
Sbjct: 80  KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGFVPCQVSTNL- 130

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 131 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 173


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 20/346 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
           Q + G   +  V   G + + G  S G+LG G +++ +   PI +LQG  +IQ A     
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGS 581

Query: 105 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
            G ++ ++D+G+V+++G   +G+  +G   +     P+ +E+L+   VV  A G   +AV
Sbjct: 582 DGHSLALTDSGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALRGEEVVNMACGFKHSAV 639

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           ++ +G+++TF  G+  RLGH    N   P  +   LE   + Q+A G  + L L+    G
Sbjct: 640 VTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSA--DG 696

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V++ G G  GKLG GS T +  P+ I+    +  +   +  G   + V+  DGRV ++
Sbjct: 697 NTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKK--ICCGTQFSVVLTNDGRVFSF 754

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G  R      G       P+ +QAL       V  G      ++  G+V+ +G      L
Sbjct: 755 GQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQL 814

Query: 344 GHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           G           H+N    P ++  LK  N R +     +S  W A
Sbjct: 815 GLG---------HSNAQREPCVIPDLKGKNIRQISAGRNHSAAWTA 851



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)

Query: 229 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
           + CG G  G+LG G+  D      I   Q   +  +  + G+  H+  +   G V +WG 
Sbjct: 540 LACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGD 599

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G YG LGHGN + +  P+ ++AL   + +++A G   + VV+ DG +++FG G+   LGH
Sbjct: 600 GDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGH 659

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 404
                  GN  AN  TP+ VT+L++     V   L        HT  L+  G  ++AFG 
Sbjct: 660 -------GN-SANKKTPERVTALEKHAIGQVACGLN-------HTLVLSADGNTVWAFGD 704

Query: 405 GDKGQLGIELVNNQTERGNPERVDI 429
           GD G+LG+    + T + +P+ +D+
Sbjct: 705 GDYGKLGL---GSCTAKTSPQAIDV 726



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 143/327 (43%), Gaps = 53/327 (16%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           V  P + +SL +    Q   G   T V+   G +     G+  RLG     +     P+ 
Sbjct: 508 VNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPI- 564

Query: 197 GTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
             L+   V+QIA      G+    +LA   SG  V+S G G  GKLGHG+   ++ PR I
Sbjct: 565 SALQGYVVIQIATSRGSDGH----SLALTDSG-EVFSWGDGDYGKLGHGNSDRQRRPRQI 619

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E   L   + V +A G  H+AVV  DG++ T+G G YG LGHGN   +  P+ V AL   
Sbjct: 620 EA--LRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKH 677

Query: 312 KAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLT--------- 361
               VA G   T V+S DG+ V++FG G+   LG  +       +  +VL          
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICC 737

Query: 362 ----PQLVTSLKQV----NERVV--------------QISLTNSIYWN------AHTFAL 393
                 ++T+  +V     ER+               QI    S + +       H  AL
Sbjct: 738 GTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLAL 797

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQTE 420
           T +G+++ +G    GQLG+   N Q E
Sbjct: 798 TSTGEVWGWGNNVDGQLGLGHSNAQRE 824


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 162/356 (45%), Gaps = 45/356 (12%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +      ++FG N   QLGHG T    +P  +  L    +IQAA G   T+ ++D 
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLTDT 176

Query: 114 GQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           G VYA G +  G+   GV G KL  +TSP  + S     +++   G  F+ +L  +G ++
Sbjct: 177 GTVYACGDNKSGQC--GV-GNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLH 232

Query: 172 TFSWGNDARLGHHTEPN------------DVEPHPLLG-----------TLENIPVVQIA 208
           TF      +LGH+T+              + +P  +L             +EN+ ++  A
Sbjct: 233 TFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIIDFA 292

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G  + +A+    S    YS G G  G+LGH  + DE  PRLI+ F   N + + V  G+
Sbjct: 293 CGNNHTVAID---SKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGS 349

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
            ++  +   G +  +G  +         E    PK VQ L       + TG YT+ V+S 
Sbjct: 350 SYSLAISDIGSLYLFGQNK------KTGEANMYPKPVQDLAGWNITSIGTG-YTSIVISA 402

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           D  + ++G   S + G   + D Q +      TP+ VT ++ +   +V +  ++S+
Sbjct: 403 DDSLIAWGA--SPTYGELGLGDLQKSSS----TPKEVTRMEGMKIPMVALGYSHSM 452



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 41/300 (13%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA  G  H++ +T  G VY+ G N SGQ G G            S  G  II+   GA  
Sbjct: 162 QAACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRISYNGPPIIKVGCGAEF 221

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL----------------------VE 144
           ++++   G ++ FG   +G+  +   G   V S ++                      V 
Sbjct: 222 SVILDIKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVL 281

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
            ++N+ ++  A GN  T  +  + R Y++ +G   RLGH  + +++ P  +     +N  
Sbjct: 282 PIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRK 341

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQP 261
           V+++  G  Y LA++             G     G   +T E   +P+ ++     N+  
Sbjct: 342 VMRVFCGSSYSLAIS-----------DIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITS 390

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVATG 319
           +      + + V+  D  +  WG    YG LG G+ ++  S PK V  +  +K   VA G
Sbjct: 391 I---GTGYTSIVISADDSLIAWGASPTYGELGLGDLQKSSSTPKEVTRMEGMKIPMVALG 447



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 47/273 (17%)

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           + ++    + +TF     ++LGH       +P  +   L +  V+Q A G  + L L   
Sbjct: 118 SVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQV-ADLADFNVIQAACGRNHTLFLT-- 174

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVV-VAAGAWHAAVVGQDG 278
                VY+ G    G+ G G+    K P +    ++  N  P++ V  GA  + ++   G
Sbjct: 175 -DTGTVYACGDNKSGQCGVGN----KLPTITSPTRISYNGPPIIKVGCGAEFSVILDIKG 229

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQA------------LNDVKAI 314
            + T+G   YG LGH  +              E+ P+ V              + +V  I
Sbjct: 230 NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNII 289

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
             A G+  T  +      YS+G G    LGH    D         + P+L+      N +
Sbjct: 290 DFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDE--------MVPRLIKFFDTQNRK 341

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           V+++   +S     ++ A+++ G LY FG   K
Sbjct: 342 VMRVFCGSS-----YSLAISDIGSLYLFGQNKK 369



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 10/135 (7%)

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           A H+ ++ ++ +  T+G  +   LGHG+      P  V  L D   I  A G   T  ++
Sbjct: 115 AAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLT 174

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSI 384
           + G VY+ G  +S          G GN+   + +P  ++       +V    + S+   I
Sbjct: 175 DTGTVYACGDNKSGQC-------GVGNKLPTITSPTRISYNGPPIIKVGCGAEFSVILDI 227

Query: 385 YWNAHTFALTESGKL 399
             N HTF L E G+L
Sbjct: 228 KGNLHTFGLPEYGQL 242



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 15/196 (7%)

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++ G     +LGHG     + P  +      N+  +  A G  H   +   G V   G  
Sbjct: 128 FTFGRNQLSQLGHGDTVTCEKPTQVADLADFNV--IQAACGRNHTLFLTDTGTVYACGDN 185

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           + G  G GN+          + N    I V  G   + ++   G++++FG  E   LGHN
Sbjct: 186 KSGQCGVGNKLPTITSPTRISYNGPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHN 245

Query: 347 AIADGQGNRHANVLT------PQLVTSLKQVNER--VVQISLTNSIYW---NAHTFALTE 395
              DG+   ++  ++      P+ V    + N+   V+ I   N I +   N HT A+  
Sbjct: 246 T--DGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIIDFACGNNHTVAIDS 303

Query: 396 SGKLYAFGAGDKGQLG 411
             + Y++G G  G+LG
Sbjct: 304 KNRAYSWGFGGIGRLG 319


>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 416

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 31/353 (8%)

Query: 46  SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           S  ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    ++ AA G
Sbjct: 56  SCVVSGPCAAHSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACG 115

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              T+ ++D G VY+FG++  G+   G Q T  V SP L+ S     +V+ A G  F+ V
Sbjct: 116 RNHTLALTDDGSVYSFGENKLGQLGQGSQ-TYAVLSPALI-SYDGQPLVKVACGAEFSMV 173

Query: 164 LSREGRVYTFSWGNDARLGHHTEPN------------DVEPHPLLGTLENIPVVQIAAGY 211
           +  +G +Y+F      +LGH+++              ++ P  +   +E     Q+    
Sbjct: 174 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVP 233

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
             +L L  Q     V+S G G  G+LGH  + DE  PRLI+ F         +  G   +
Sbjct: 234 NVVLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRGASQIYTGYQCS 290

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             V ++G +  WG      + + + E    PKVV  L   K   +A G  +  + +++  
Sbjct: 291 FAVSENGGLFFWG------VTNTSRESTMYPKVVPDLCGWKIRSLACGKSSIIIAADEST 344

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           +     G S + G     D   N+  +  T Q V +L  V    V +  ++S+
Sbjct: 345 IT---WGPSPTCGELGYGD---NKPKSSTTAQEVKTLDGVYVEKVMMGYSHSL 391



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
           VV    A H+ ++  +G++ +WG    G LGHG+ +    PK+++ L D   +  A G  
Sbjct: 58  VVSGPCAAHSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRN 117

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            T  +++DG VYSFG  +   LG       QG++   VL+P L++   Q    +V+++  
Sbjct: 118 HTLALTDDGSVYSFGENKLGQLG-------QGSQTYAVLSPALISYDGQ---PLVKVACG 167

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   +  +   G LY+FG  + GQLG
Sbjct: 168 AEF-----SMVVDCKGNLYSFGCPEYGQLG 192



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 34/131 (25%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
           WG  RYGCL                 NDV+   V +G     + +++ +G ++S+G  + 
Sbjct: 42  WGPHRYGCL-----------------NDVQVSCVVSGPCAAHSLLITAEGKLWSWGRNDK 84

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH     G   R   +  P+L+  L   +  VV  +   +     HT ALT+ G +Y
Sbjct: 85  GQLGH-----GDTKR---LEAPKLIEGL--ADHLVVAAACGRN-----HTLALTDDGSVY 129

Query: 401 AFGAGDKGQLG 411
           +FG    GQLG
Sbjct: 130 SFGENKLGQLG 140



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 29/191 (15%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           + ++ Q +  P   + + S+  V+S+G    G+LGH   ++E  P         R+I+  
Sbjct: 223 KSKDGQVMPVPNVVLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP---------RLIKLF 273

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAE------YGVQGTKLVTS--PQLVESLKNIFVVQ 153
              GR      A Q+Y   + SF  +E      +GV  T   ++  P++V  L    +  
Sbjct: 274 DFPGR-----GASQIYTGYQCSFAVSENGGLFFWGVTNTSRESTMYPKVVPDLCGWKIRS 328

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAA 209
            A G     + + E    T +WG     G       +P        + TL+ + V ++  
Sbjct: 329 LACGKSSIIIAADES---TITWGPSPTCGELGYGDNKPKSSTTAQEVKTLDGVYVEKVMM 385

Query: 210 GYCYLLALACQ 220
           GY + L +A Q
Sbjct: 386 GYSHSLVIARQ 396


>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
 gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
          Length = 391

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 63/395 (15%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + S+  V ++G+   GQLG G  +++     + +L+   ++   AG+  ++ I + G+++
Sbjct: 1   MASRTCVLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +  G   +  + TK  ++P  V++L N+ +VQAAIG +    +  EGR  T++WG 
Sbjct: 61  TWGWNQRGTLGHPPE-TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGR--TYAWGG 117

Query: 178 -------------------DARLGHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                              ++++ H   T P    P   +       VV    G+ +   
Sbjct: 118 NEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWG 177

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
               P  +   SV                  P  ++  + + +    +A GA+H   + Q
Sbjct: 178 QPWPPGDIKQISV------------------PVRVQGLENVTM----IAVGAFHNLALVQ 215

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G V  WG   YG LG G+ +  S P  V+ L  +  + +A G + +  ++ DG VY +G
Sbjct: 216 HGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWG 275

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
            GE   LG        G+  ++ + PQ V  L    E VVQ+S   +     H+ A T S
Sbjct: 276 RGEHGRLGF-------GDDKSSKMLPQKVHLL--AGEPVVQVSCGGT-----HSVAATIS 321

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 431
           G++++FG GD G+LG          G+P  V + L
Sbjct: 322 GRMFSFGRGDHGRLGY---GGAVTTGHPVEVPVSL 353



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 29/310 (9%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  ++I+QAA G    
Sbjct: 44  VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-------AAIGNFF 160
           + + + G+ YA+G + +G+     Q  +     +     ++I + Q        A G   
Sbjct: 104 LAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTH 163

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
           + VL+ EG V+T+        G    P D++    P  + G LEN  V  IA G  + LA
Sbjct: 164 SVVLTEEGHVWTW--------GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGAFHNLA 212

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L        V++ G    G+LG G       P  ++    L L  V +AAG WH+  +  
Sbjct: 213 LVQHGE---VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHSMALTP 267

Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DG V  WG G +G LG G+++   + P+ V  L     + V+ G   +   +  G ++SF
Sbjct: 268 DGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSF 327

Query: 336 GCGESASLGH 345
           G G+   LG+
Sbjct: 328 GRGDHGRLGY 337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN   IA G  H++A+   G V+++G+N  GQLG G T+    P P++ L G+ ++  AA
Sbjct: 198 ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAA 257

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   +M ++  G VY +G+   G   +G  + +K++  PQ V  L    VVQ + G   +
Sbjct: 258 GGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML--PQKVHLLAGEPVVQVSCGGTHS 315

Query: 162 AVLSREGRVYTFSWGNDARLGH 183
              +  GR+++F  G+  RLG+
Sbjct: 316 VAATISGRMFSFGRGDHGRLGY 337



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 30/261 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQ----- 99
           QA  G  H +AV  +G  Y++G N  GQ      T E++ +       + I I Q     
Sbjct: 95  QAAIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPR 154

Query: 100 --AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
              AAG   ++++++ G V+ +G+       +     K ++ P  V+ L+N+ ++  A+G
Sbjct: 155 LCVAAGGTHSVVLTEEGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVTMI--AVG 206

Query: 158 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            F    L + G V+  +WGN+   +LG         P P+ G L  + +V IAAG  + +
Sbjct: 207 AFHNLALVQHGEVW--AWGNNEYGQLGTGDTQPRSSPVPVKG-LTGLVLVDIAAGGWHSM 263

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAV 273
           AL   P G AVY  G G  G+LG G   D+K  +++ Q   LL  +PVV V+ G  H+  
Sbjct: 264 ALT--PDG-AVYGWGRGEHGRLGFG---DDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVA 317

Query: 274 VGQDGRVCTWGWGRYGCLGHG 294
               GR+ ++G G +G LG+G
Sbjct: 318 ATISGRMFSFGRGDHGRLGYG 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 27/241 (11%)

Query: 15  ERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQ 74
           E+Q  +Q+  G  K++ R +   + C  R      AG  HS+ +T +G V+++G      
Sbjct: 126 EQQTKEQQNKGESKVLHRDITIPQRCAPRLC--VAAGGTHSVVLTEEGHVWTWG------ 177

Query: 75  LGHGTTEEEWRPRPIRSL------QGIR-IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
                  + W P  I+ +      QG+  +   A GA   + +   G+V+A+G + +G+ 
Sbjct: 178 -------QPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQ- 229

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
             G   T+  +SP  V+ L  + +V  A G + +  L+ +G VY +  G   RLG   + 
Sbjct: 230 -LGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDK 288

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           +       +  L   PVVQ++ G  +  ++A   SG  ++S G G  G+LG+G      H
Sbjct: 289 SSKMLPQKVHLLAGEPVVQVSCGGTH--SVAATISGR-MFSFGRGDHGRLGYGGAVTTGH 345

Query: 248 P 248
           P
Sbjct: 346 P 346


>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 740

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 185/383 (48%), Gaps = 58/383 (15%)

Query: 64  VYSFGSNSSGQLGHG-TTEEEWRPR----PIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
           V++FGSN+ G LG   + + +  PR    P+++   + ++   AG G + L++D  ++Y+
Sbjct: 12  VFTFGSNAHGALGFDQSIKVQLVPRTLDVPVKAANAVHVV---AGNGASTLLTDGWEIYS 68

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGN 177
           +GK + G            T+ Q V  L+ +  V++ + G+  +A +   G VY   WG 
Sbjct: 69  WGK-TVG------------TNNQSVRKLQQLSNVLEVSHGSNHSATVLSSGEVY--GWGE 113

Query: 178 DARL-GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
            + L G   +    +P  L      +   Q+A G  ++  L  Q  GM + S+G    G+
Sbjct: 114 MSFLEGLRRKRTIKQPRKLTFDKVQLNAKQVACGDRHVCIL--QNDGM-LMSLGANDAGQ 170

Query: 237 LGHGSRTDE-----KHPRLIEQF--QLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRY 288
           LG G ++ E      H R++ +    L N+Q   VA G  H  A+  QDG + +WGWG  
Sbjct: 171 LGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCVAISAQDGALFSWGWGTN 230

Query: 289 GCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LGH +EE    P  V+AL+ V+    VA G   T   +++GDVY FG       GH+ 
Sbjct: 231 GRLGHMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEGDVYGFGWN-----GHSQ 285

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           +A G+     + L P L       N+ VV++S        AH+ A++ SG L+ +G  D 
Sbjct: 286 VAGGE----TDCLKPMLCLE----NQGVVRLSCG-----FAHSAAISSSGSLFTWGMNDD 332

Query: 408 GQLGIELVNNQTERGNPERVDID 430
           GQ G   V N+     P RV+ +
Sbjct: 333 GQCG---VGNEETVPRPTRVEFE 352



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 32/302 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQ-LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS  V S G VY +G  S  + L    T ++ R      +Q +   Q A G     +
Sbjct: 95  GSNHSATVLSSGEVYGWGEMSFLEGLRRKRTIKQPRKLTFDKVQ-LNAKQVACGDRHVCI 153

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG--TKL-VTSPQLV----ESLKNIFVVQAAIG-NFFT 161
           + + G + + G +  G+   G Q   TK+ +   ++V    +SL N+   + A G N   
Sbjct: 154 LQNDGMLMSLGANDAGQLGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCV 213

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           A+ +++G ++++ WG + RLGH +E    +P  +       P  ++A G  + LA   + 
Sbjct: 214 AISAQDGALFSWGWGTNGRLGHMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEG 273

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               VY  G     ++  G  TD   P L     L N   V ++ G  H+A +   G + 
Sbjct: 274 D---VYGFGWNGHSQVA-GGETDCLKPMLC----LENQGVVRLSCGFAHSAAISSSGSLF 325

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG    G  G GNE  E+VP+  +   + +      G Y       +G V S  CG S 
Sbjct: 326 TWGMNDDGQCGVGNE--ETVPRPTRVEFEDRG-----GRY-------EGHVISVACGHSH 371

Query: 342 SL 343
           ++
Sbjct: 372 TV 373


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 162/364 (44%), Gaps = 36/364 (9%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG  H+ ++ S G VYS+G    GQLG+GT      P   + L    +I    G   TM
Sbjct: 39  VAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLN--HVIDVHTGVRSTM 96

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G V+ +G +  G+   G+     +  P  V  L  I  V   +G + +  LS +G
Sbjct: 97  ALRSDGTVWTWGSNENGQ--LGIGTVTDMNVPGQVSGLSGIKAVSGGLG-YHSMALSEDG 153

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+T+   ++  LG+ T      P  + G  +   V  IAAG  + LAL    S   V++
Sbjct: 154 SVWTWGKNDNGELGNGTTLQQNTPVQVAGLND---VTAIAAGGYFSLALK---SDGTVWA 207

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG G+ TD   P      Q+  L  V+ +AAG  H+  V QDG V  WG   
Sbjct: 208 WGVNGDGELGDGTTTDRYVP-----VQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNT 262

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LG G     + P  ++ L  + A  VA G Y +  +   G+V+S+G      LG  +
Sbjct: 263 YGTLGDGTRTNRTRPVQIKNLQHIVA--VAGGGYHSLALDRTGNVWSWGDNSQRQLGVGS 320

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                   +A+ L P  V+ ++ V E               H+ A+ + G ++ +G    
Sbjct: 321 --------NASSLIPVPVSGIEHVREIAAG---------GFHSVAMKKDGTVWGWGFNGG 363

Query: 408 GQLG 411
           GQLG
Sbjct: 364 GQLG 367



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 57/321 (17%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           ++A+ S G V+++GSN +GQLG GT  +   P  +  L GI+ +    G   +M +S+ G
Sbjct: 95  TMALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGY-HSMALSEDG 153

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            V+ +GK+  GE   G   T    +P  V  L ++  + A  G +F+  L  +G V+ + 
Sbjct: 154 SVWTWGKNDNGELGNGT--TLQQNTPVQVAGLNDVTAIAA--GGYFSLALKSDGTVWAWG 209

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
              D  LG  T  +   P  + G  +   V+ IAAG  + LA+    +   V++ G    
Sbjct: 210 VNGDGELGDGTTTDRYVPVQVAGLTD---VMAIAAGGSHSLAVTQDGT---VWAWGKNTY 263

Query: 235 GKLGHGSRTDEKHPRLIEQFQLL------------------------------------- 257
           G LG G+RT+   P  I+  Q +                                     
Sbjct: 264 GTLGDGTRTNRTRPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNAS 323

Query: 258 NLQPVVV---------AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           +L PV V         AAG +H+  + +DG V  WG+   G LG G       P + +A+
Sbjct: 324 SLIPVPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTLTKAV 383

Query: 309 NDVKAIHVATGDYTTFVVSED 329
            D       +G      ++ D
Sbjct: 384 LDTTPPDPGSGTLNPDSITTD 404



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 115/265 (43%), Gaps = 32/265 (12%)

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G + TA L   G VY++ +G+  +LG+ T      P    G      V+ +  G    +A
Sbjct: 41  GYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNH---VIDVHTGVRSTMA 97

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVV 274
           L    S   V++ G    G+LG G+ TD   P      Q+  L  +   +G   +H+  +
Sbjct: 98  LR---SDGTVWTWGSNENGQLGIGTVTDMNVPG-----QVSGLSGIKAVSGGLGYHSMAL 149

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            +DG V TWG    G LG+G    ++ P  V  LNDV AI  A G Y +  +  DG V++
Sbjct: 150 SEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAI--AAGGYFSLALKSDGTVWA 207

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G      LG     D    R+  V    L          V+ I+   S     H+ A+T
Sbjct: 208 WGVNGDGELGDGTTTD----RYVPVQVAGLTD--------VMAIAAGGS-----HSLAVT 250

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQT 419
           + G ++A+G    G LG     N+T
Sbjct: 251 QDGTVWAWGKNTYGTLGDGTRTNRT 275



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           + AG +H A +   G V +WG+G  G LG+G     + P + + LN V  +H  TG  +T
Sbjct: 38  LVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVH--TGVRST 95

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +  DG V+++G  E+  LG   + D       NV  P  V+ L  +  + V   L   
Sbjct: 96  MALRSDGTVWTWGSNENGQLGIGTVTD------MNV--PGQVSGLSGI--KAVSGGL--- 142

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
                H+ AL+E G ++ +G  D G+LG
Sbjct: 143 ---GYHSMALSEDGSVWTWGKNDNGELG 167



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 8/155 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AVT  G V+++G N+ G LG GT     RP  I++LQ   I+  A G   ++ 
Sbjct: 241 AGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLA 298

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREG 168
           +   G V+++G +S  +   G   + L+  P   +E ++ I     A G F +  + ++G
Sbjct: 299 LDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGIEHVREI-----AAGGFHSVAMKKDG 353

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
            V+ + +    +LG  T      P      L+  P
Sbjct: 354 TVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTTP 388


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 42/358 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   + G     LI+  G+V+ +G+ S G+  + V     V+SP++VES
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMD--VSSPKMVES 353

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---ARLG-HHTEPNDVEPHPLLGTLEN 201
           L  + V   A G + T  L+  G +Y  +WG +   A LG      +   P  + G L  
Sbjct: 354 LDGVHVKSVACGEYQTCALTDSGELY--AWGENKYGANLGCEERSRSQWLPRRISGPLTG 411

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + ++ +A G  +   ++   S   +++ G G  G LGHG+      P+ +E  + L ++ 
Sbjct: 412 VCILNVACGDWHTAIVS---SSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKS 468

Query: 262 VVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           V  A G+WH A +           G  G++ TWG G  G LGH + E + +P  V  L +
Sbjct: 469 V--ACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE 526

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           +    V+ G   T  ++  G VY+ G      LG         N HA      +V    +
Sbjct: 527 LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLG---------NPHAK--DKSIVIVEGK 575

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           + E  V+  +++  Y   H  ALT SG LY +G G  GQLG+    N  +R  P  V+
Sbjct: 576 LKEEFVK-EISSGSY---HVAALTSSGSLYTWGKGTNGQLGL---GNVEDRNFPTLVE 626



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 150/314 (47%), Gaps = 22/314 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  +T +G V+ +G  S G+LGH    +   P+ + SL G+ +   A G  +T  +
Sbjct: 313 GRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCAL 372

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGR 169
           +D+G++YA+G++ +G      + ++    P+ +   L  + ++  A G++ TA++S  G+
Sbjct: 373 TDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQ 432

Query: 170 VYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
           ++T+  G+   LGH      ++P +VE      +L+ + V  +A G  +  A+       
Sbjct: 433 LFTYGDGSFGVLGHGNLLSVSQPKEVE------SLKGLLVKSVACGSWHTAAIVDIIVDR 486

Query: 219 --CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
                 G  +++ G G  G+LGH     +  P  + Q   L+     V+ G      +  
Sbjct: 487 FKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQ--VSCGRMLTVALTN 544

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            G+V T G   +G LG+ + + +S+  V   L +     +++G Y    ++  G +Y++G
Sbjct: 545 TGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWG 604

Query: 337 CGESASLGHNAIAD 350
            G +  LG   + D
Sbjct: 605 KGTNGQLGLGNVED 618



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 17/191 (8%)

Query: 223 GMAVYSVGCGLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           G+ V ++GC +  + G+ +  + D   P+L+E   +L++    ++ G  HAA++ + G V
Sbjct: 270 GVEVGNIGC-VDNQFGYHNTKQVDALLPKLLESTVMLDV--TNISLGRKHAALITKRGEV 326

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             WG G  G LGH  +   S PK+V++L+ V    VA G+Y T  +++ G++Y++G    
Sbjct: 327 FCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWG---E 383

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
              G N    G   R  +   P      ++++  +  + + N    + HT  ++ SG+L+
Sbjct: 384 NKYGANL---GCEERSRSQWLP------RRISGPLTGVCILNVACGDWHTAIVSSSGQLF 434

Query: 401 AFGAGDKGQLG 411
            +G G  G LG
Sbjct: 435 TYGDGSFGVLG 445



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++A+T+ G VY+ GS+  GQLG+   +++        L+   + + ++G+  
Sbjct: 531 QVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYH 590

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              ++ +G +Y +GK + G  + G+   +    P LVE+L+++ V   A G+  TA +
Sbjct: 591 VAALTSSGSLYTWGKGTNG--QLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAI 646


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 188/446 (42%), Gaps = 83/446 (18%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS  +  +GV+Y++GS   G+LGHG   E   PR +    G+ ++Q A G   T+ 
Sbjct: 311 AGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLA 370

Query: 110 ISDAGQVYAFGKD---SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  G V+A+G      FGE E G  G  +V  P+ +  ++   V+  A G + +A ++ 
Sbjct: 371 LTHKGTVFAWGAGLALGFGEGEDGSGG--MVAVPKHLSDIEAA-VLNIAAGPYHSAAVTV 427

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP---------------HPLLGT------LENIPVV 205
            G +  +  G  +RLGH  + N   P                 +LG         ++ V+
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVL 487

Query: 206 QIAA------GYCYLLALACQPSGM-------AVYSVGCGLGGKLGHGS--RTDEKHPRL 250
            +            L +L C  S         AV+  G    G+LG G     D+  P  
Sbjct: 488 DVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVK 547

Query: 251 IEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           +E F      P+  +A G+ H   V Q G V  WG    G LG G       P  V AL 
Sbjct: 548 LECFS----TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 310 DVKAIHVATGD-YTTFVVS-------------EDGDVYSFGCGESASLGHNAIADGQGNR 355
             +A+ V  GD Y+  + S             E GD++++G  ES  LG      G+   
Sbjct: 604 --QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL-----GEDVA 656

Query: 356 HANVLTPQLVT-----------SLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
             ++LTPQ V            SL+ Q  +RV  +S +      +H+ A+T  G+ YA+G
Sbjct: 657 SGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWG 716

Query: 404 AGDKGQLGIELVNNQTERGNPERVDI 429
           AG  G+LGI    N      P R D 
Sbjct: 717 AGYYGRLGIGTTANAY---TPTRCDF 739



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 179/419 (42%), Gaps = 61/419 (14%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-----------RSLQGIRIIQ 99
           G  H++A++ +G +Y++G  S G LG G T + + P  +           +   G+  ++
Sbjct: 189 GADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVR 248

Query: 100 A--------AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           A        +AGA  +M  +  G ++ +G    G    G+   +   SP +V+ + +  +
Sbjct: 249 ADPVIVTCCSAGAKHSMACTSDGTLWTWGHG--GNGRLGLGHNRGSLSPAVVDYILDRDI 306

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           V    G+  +A + R+G +YT+  G   RLGH  +     P  + G    +PV+Q+A G 
Sbjct: 307 VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGT 365

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAW 269
            + LAL  + +   V++ G GL   LG G   D     +     L +++  V  +AAG +
Sbjct: 366 FHTLALTHKGT---VFAWGAGLA--LGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPY 420

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVV 326
           H+A V   G +  WG G    LGHG+++ +  PK V  L +   V  +    G       
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480

Query: 327 SEDGDVY----------------SFGCGESASL---GHNAI------ADGQGNRHANVLT 361
             D DV                 S  CGES ++   G  A+       DGQ     +V  
Sbjct: 481 YSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEE 540

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            Q     + V        +      + H  A+ + G ++A+GA D GQLG+ +V    E
Sbjct: 541 DQ----YEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFE 595



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 76/379 (20%)

Query: 62  GVVYSFGSNSSGQLGH----------------GTTEEE---W---RPRPIRSLQGIRIIQ 99
           G VY+FG  + G+LG+                G  +E+   W   +P  +R     +I +
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIAR 185

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            + GA  T+ +SD G +YA+G  S+G                         + Q    + 
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGN------------------------LGQGDTSDS 221

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           +T V     RVY    G++A  G   E   V      G +   PV+          ++AC
Sbjct: 222 YTPV-----RVYL---GSEAGSGKKKENVGV------GKVRADPVIVTCCSAGAKHSMAC 267

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              G  +++ G G  G+LG G       P +++   +L+   V V AG  H+A + + G 
Sbjct: 268 TSDG-TLWTWGHGGNGRLGLGHNRGSLSPAVVDY--ILDRDIVFVNAGDSHSACIDRQGV 324

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           + TWG G +G LGHG++    VP+ V+    V  + VA G + T  ++  G V+++G G 
Sbjct: 325 LYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG- 383

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             +LG     DG G          +V   K +++  ++ ++ N      H+ A+T  G L
Sbjct: 384 -LALGFGEGEDGSGG---------MVAVPKHLSD--IEAAVLNIAAGPYHSAAVTVGGDL 431

Query: 400 YAFGAGDKGQLGIELVNNQ 418
             +G G   +LG     NQ
Sbjct: 432 LVWGVGGSSRLGHGDQQNQ 450



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 167/413 (40%), Gaps = 70/413 (16%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A TS G ++++G   +G+LG G       P  +  +    I+   AG   +  
Sbjct: 259 AGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSAC 318

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G +Y +G   FG   +G QG   +  P+ VE    + V+Q A G F T  L+ +G 
Sbjct: 319 IDRQGVLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGT 376

Query: 170 VYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           V  F+WG    LG   E  D       V  H  L  +E   V+ IAAG  +  A+     
Sbjct: 377 V--FAWGAGLALG-FGEGEDGSGGMVAVPKH--LSDIE-AAVLNIAAGPYHSAAVTV--- 427

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP----------------------RLIEQFQLLNLQ 260
           G  +   G G   +LGHG + ++  P                      RL  ++  L++ 
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVL 487

Query: 261 PVVVAAG----AW----------HAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKV 304
            V   +G    +W          H   +   G V  WG    G LG G   EE +  P  
Sbjct: 488 DVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVK 547

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           ++  +      +A G      V++ GDV+++G  ++  LG   +             P  
Sbjct: 548 LECFS-TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS--------FEPAA 598

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFAL-----TESGKLYAFGAGDKGQLGI 412
           VT+L+Q  +       +  I       ++     TE G L+A+GA + G+LG+
Sbjct: 599 VTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 150/381 (39%), Gaps = 49/381 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTML 109
           G  H+IA+T  G V+ +GSN  GQLG G   EE +  P++       I + A G+   + 
Sbjct: 508 GESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLA 567

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G V+A+G +  G+   GV   +    P  V +L+    V    G+ ++A ++  G 
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGV--VRPSFEPAAVTALRQ--AVDVFCGDDYSACITSLGG 623

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
             + S       G        E   L G  E++    I         L  Q    +V   
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKL-GLGEDVASGSI---------LTPQKVVFSVPVC 673

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            C L          D    +  ++   ++  P+   +G  H+  +   G    WG G YG
Sbjct: 674 ACSL----------DSLEMQAYKRVFCVSFSPLC--SGTSHSLAITAQGECYAWGAGYYG 721

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G       P        V+   VA G   +  +S DGD++ +G  E          
Sbjct: 722 RLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC------- 774

Query: 350 DGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                   N ++P++   L+      +V  IS +       H+ A+TE+G+++A+G    
Sbjct: 775 -----STTNYMSPRIFMQLEGQGGVPKVKSISASER-----HSLAVTEAGEVFAWGDNKL 824

Query: 408 GQLGIELVNNQTER-GNPERV 427
            Q G      Q ER   PERV
Sbjct: 825 YQTGCG--KRQAERLDRPERV 843



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 49/332 (14%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H +AV   G V+++G+N +GQLG G     + P  + +L+  + +    G   +  I
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACI 618

Query: 111 SDAGQVYAFGKDS---------FGEAEYGVQG------TKLVTSPQLV------------ 143
           +  G   +   ++         +G AE G  G      +  + +PQ V            
Sbjct: 619 TSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLD 678

Query: 144 ----ESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
               ++ K +F V  +    G   +  ++ +G  Y +  G   RLG  T  N   P    
Sbjct: 679 SLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTP-TRC 737

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
              + + +  +AAG C+ LAL+    G   +      G +    S T+   PR+  Q + 
Sbjct: 738 DFPKGVRLRSVAAGACHSLALSMD--GDLWF-----WGRREDTCSTTNYMSPRIFMQLEG 790

Query: 257 LNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 312
               P V  ++A   H+  V + G V  WG  +    G G  + E +  P+ V  L    
Sbjct: 791 QGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSA- 849

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              VATG   +F +   G+V++ G  +S  LG
Sbjct: 850 CQWVATGPQGSFFILASGEVFAAGVIKSGRLG 881



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 45/76 (59%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   +G  HS+A+T++G  Y++G+   G+LG GTT   + P      +G+R+   AAGA 
Sbjct: 694 SPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGAC 753

Query: 106 RTMLISDAGQVYAFGK 121
            ++ +S  G ++ +G+
Sbjct: 754 HSLALSMDGDLWFWGR 769


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  H++ + +  +V+S G NS GQLG         P P+++L+ ++    + G   
Sbjct: 27  QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + GV   K +  +P+ + +L  I ++Q + G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++ +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQPSPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                S   G     G   +     P  I   +  NL  + ++ G  H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           +G    G LG+     +  P++V+ ++ + +     GD+T   V   G V SFG G SA+
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSAT 319



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + PR I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +F WG++     A  G + +    +P  + G L+N+ V+ I+ G  +   L+      
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V++ G    G+LG+    +++ P+L+E+   L  Q  +   G    A V   G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313

Query: 285 WGRYGCLGHGNEECE----SVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
            G        + E       +  ++ A  L DV+  H+  G Y  FV +
Sbjct: 314 RGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 30/318 (9%)

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G  ++QAA+G    +L+     V++ G++S G+   G +G      P+ V++LK +    
Sbjct: 22  GAELLQAASGERHALLLLTNSLVHSCGENSRGQ--LGRRGAPRWDLPEPVQALKTLKFDL 79

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
            + G   +  +  +GRV+ +  G++ +LG   E  ++   P  + TL  I ++Q++ G+ 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKITTLNGIKIIQVSCGHY 138

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
           + LAL+       V+S G    G+LG G     +  P+ +   + + L    VAAG  H+
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPL--AQVAAGGAHS 193

Query: 272 AVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
             +   G    WG    G L   G   +   + P  + AL ++  I+++ GD  T V+S+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           DG V++FG   S  LG++   + +G        PQLV   ++++  V QI          
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERIDGLVSQIDCGGD----- 297

Query: 389 HTFALTE-SGKLYAFGAG 405
           HT A    +G++ +FG G
Sbjct: 298 HTIAYVHTTGQVVSFGRG 315



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G     +L     V++    +  +LG    P    P P+   L+ +    ++ G
Sbjct: 25  LLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPV-QALKTLKFDLVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G G  G+LG G   +    PR I    L  ++ + V+ G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAGSEGQLGVGELKEINFTPRKITT--LNGIKIIQVSCGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +D +V +WG   +G LG G E   +  P+ V++L  +    VA G   +F +S 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +      
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVQVQSN--KPLSIGALKNLG--VIYISCGDE----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           HT  L++ GK++ FG    GQLG      +      ER+D
Sbjct: 247 HTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T ++S  G+V+ FG +S G+  Y     K    PQLVE +  +       G+   A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGLVSQIDCGGDHTIA 301

Query: 163 VLSREGRVYTFSWGNDA 179
            +   G+V +F  G  A
Sbjct: 302 YVHTTGQVVSFGRGPSA 318


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 32/397 (8%)

Query: 44   ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP--RPIRSLQGIRIIQAA 101
            + ++  AG  HS+ + +K  ++S+G N  G LG GT  +  RP    +  L G  ++  +
Sbjct: 1429 DKNRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSIS 1488

Query: 102  AGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIG 157
             G+G  R+  I D G+++A+G +  G    G    +    P LV+  SL +  V   A G
Sbjct: 1489 TGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDR--NRPVLVDLASLGSSKVTAVAAG 1546

Query: 158  NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYL 214
             +   VL  + R++ +    D +LG  T  N   P P+   LE +    V  + AG  + 
Sbjct: 1547 RYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHS 1606

Query: 215  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            + L        ++  G    G+LG G+ T +  P L++   L   + + V+AG  H   +
Sbjct: 1607 IILD---DLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVAL 1663

Query: 275  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDV 332
             + G +  WG    G LG G+      P  V   +L+  K + ++ G + T  + E G +
Sbjct: 1664 DEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRL 1723

Query: 333  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            +++G  ES  LG         N+H  V        L  +N R V      S Y+    F 
Sbjct: 1724 WAWGPNESGLLGDGTTI----NQHRPV-----QVDLTPLNGRKVVAVSAGSFYF----FV 1770

Query: 393  LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            + + G+L+A+G+   GQLG      +T R  P RVD+
Sbjct: 1771 VDDRGELWAWGSNSYGQLGD---GTKTRRLKPVRVDM 1804


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G VY +G + F +   G      V +P+L+ES   + V     G    A++SREG+
Sbjct: 56  IESKGDVYIWG-EVFAD---GFPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGK 111

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+T  WG ++  RLGH  + +  +PH  L    ++  + I A   +  +   +      +
Sbjct: 112 VFT--WGEESGGRLGHGIDKDFGKPH--LVEFPDVVTLDIVACGEFHTSAVSKCDNFFTW 167

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G LGHG+      P+ +  F L  L+ V VA G+WH+A+   +G++ T+G G 
Sbjct: 168 GDGTHNVGLLGHGNEISHWIPKSVNGF-LDGLRVVSVACGSWHSALATSNGKLFTFGDGT 226

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG----------DVYSFGC 337
           +G LGHG++E    PK VQ L+ +K + VA G + T  + E             ++++G 
Sbjct: 227 FGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGD 286

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G+   LGH       GN+    L P  V+ L + N    QI+  +++     T ALT SG
Sbjct: 287 GDKFRLGH-------GNKDM-YLKPTRVSPLIEYN--FQQIACGHTM-----TVALTTSG 331

Query: 398 KLYAFGAGDKGQLG 411
            ++  G+ + GQLG
Sbjct: 332 HVFTMGSTENGQLG 345



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 167/369 (45%), Gaps = 42/369 (11%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + SKG VY +G   +   G  +  +   PR + S   + +    +G     ++S  G+V+
Sbjct: 56  IESKGDVYIWGEVFAD--GFPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVF 113

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG- 176
            +G++S G   +G+   K    P LVE    + +   A G F T+ +S+    +T  WG 
Sbjct: 114 TWGEESGGRLGHGID--KDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFT--WGD 169

Query: 177 ---NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              N   LGH  E +   P  + G L+ + VV +A G  +  ALA   S   +++ G G 
Sbjct: 170 GTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACG-SWHSALAT--SNGKLFTFGDGT 226

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG------RVCT 282
            G LGHG +    +P+   + QLL+ L+ V VA G WH A    V  Q G      ++ T
Sbjct: 227 FGVLGHGDQESVMYPK---EVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSWKLFT 283

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG G    LGHGN++    P  V  L +     +A G   T  ++  G V++ G  E+  
Sbjct: 284 WGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQ 343

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           L         GN +A    P LV   K + E + +IS         H  A+T   +LY +
Sbjct: 344 L---------GNPNAAGKVPTLVQD-KLLGEFIEEISC-----GAHHVAAVTSRSELYTW 388

Query: 403 GAGDKGQLG 411
           G G  G+LG
Sbjct: 389 GKGSNGRLG 397



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 151/308 (49%), Gaps = 25/308 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
           G  H+ AV+     +++G  +++ G LGHG     W P+ +   L G+R++  A G+  +
Sbjct: 151 GEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHS 210

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            L +  G+++ FG  +FG   +G Q +  V  P+ V+ L  +  V+ A G + TA +   
Sbjct: 211 ALATSNGKLFTFGDGTFGVLGHGDQES--VMYPKEVQLLSGLKTVKVACGVWHTAAIIEV 268

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
                  +   +++T+  G+  RLGH  +   ++P  +   +E     QIA G+   +AL
Sbjct: 269 AFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIE-YNFQQIACGHTMTVAL 327

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  V+++G    G+LG+ +    K P L+ Q +LL      ++ GA H A V   
Sbjct: 328 TT--SGH-VFTMGSTENGQLGNPNAAG-KVPTLV-QDKLLGEFIEEISCGAHHVAAVTSR 382

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFG 336
             + TWG G  G LGHG+ +    P +V AL D    +++ G ++T+ V ++    Y  G
Sbjct: 383 SELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSNFTSCVCNQK---YVSG 439

Query: 337 CGESASLG 344
             +S   G
Sbjct: 440 TDQSVCFG 447



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           N Q IA G   ++A+T+ G V++ GS  +GQLG+     +        L G  I + + G
Sbjct: 313 NFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCG 372

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           A     ++   ++Y +GK S G   +G   T    SP LV +LK+  +   + G+ FT+ 
Sbjct: 373 AHHVAAVTSRSELYTWGKGSNGRLGHG--DTDDRKSPTLVLALKDRHLKNISCGSNFTSC 430

Query: 164 LSREGRV 170
           +  +  V
Sbjct: 431 VCNQKYV 437


>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
 gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
          Length = 394

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 177/385 (45%), Gaps = 40/385 (10%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           + S+  V ++G+   GQLG G  +++     + +L+   ++   AG+  ++ I + G+++
Sbjct: 1   MASRTCVLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF---S 174
            +G +  G   +  + TK  ++P  V++L N+ +VQAAIG +    +  EGR Y +    
Sbjct: 61  TWGWNQRGTLGHPPE-TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNE 119

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAV 226
           +G  A      E  +     +L     IP        V Q+ AG  + + L  +     V
Sbjct: 120 YGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSVVLTEEGH---V 176

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++     G     G       P  ++  + + +    +A GA+H   + Q G V  WG  
Sbjct: 177 WT----WGQPWPPGDIKQISVPVRVQGLENVTM----IAVGAFHNLALVQHGEVWAWGNN 228

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            YG LG G+ +  S P  V+ L  +  + +A G + +  ++ DG VY +G GE   LG  
Sbjct: 229 EYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGF- 287

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                 G+  ++ + PQ V  L    E VVQ+S   +     H+ A T SG++++FG GD
Sbjct: 288 ------GDDKSSKMLPQKVHLL--AGEPVVQVSCGGT-----HSVAATISGRMFSFGRGD 334

Query: 407 KGQLGIELVNNQTERGNPERVDIDL 431
            G+LG    +     G+P  V + L
Sbjct: 335 HGRLGY---SGAVTTGHPVEVPVSL 356



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 36/316 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   T+ E  P  +++L  ++I+QAA G    
Sbjct: 44  VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHC 103

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGT------------KLVTSPQLVESLKNIFVVQAA 155
           + + + G+ YA+G + +G+     Q              + +T PQ       + V Q  
Sbjct: 104 LAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQ--RCAPRLCVRQLT 161

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
            G   + VL+ EG V+T+        G    P D++    P  + G LEN  V  IA G 
Sbjct: 162 AGGTHSVVLTEEGHVWTW--------GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGA 210

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            + LAL        V++ G    G+LG G       P  ++    L L  V +AAG WH+
Sbjct: 211 FHNLALVQHGE---VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHS 265

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             +  DG V  WG G +G LG G+++   + P+ V  L     + V+ G   +   +  G
Sbjct: 266 MALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISG 325

Query: 331 DVYSFGCGESASLGHN 346
            ++SFG G+   LG++
Sbjct: 326 RMFSFGRGDHGRLGYS 341



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN   IA G  H++A+   G V+++G+N  GQLG G T+    P P++ L G+ ++  AA
Sbjct: 201 ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAA 260

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   +M ++  G VY +G+   G   +G  + +K++  PQ V  L    VVQ + G   +
Sbjct: 261 GGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML--PQKVHLLAGEPVVQVSCGGTHS 318

Query: 162 AVLSREGRVYTFSWGNDARLGH 183
              +  GR+++F  G+  RLG+
Sbjct: 319 VAATISGRMFSFGRGDHGRLGY 340


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 154/340 (45%), Gaps = 38/340 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G     L +  G+V+A+G++  G   +G      ++ P+LVE+
Sbjct: 246 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEA 303

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
           L    V   A G F T  ++  G +YT  WG    N   LG+    +   P  + G LE 
Sbjct: 304 LAVSNVEYIACGEFHTCAVTASGDLYT--WGDGYYNVGLLGNGAGASHWLPKRVSGPLEG 361

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + V+ ++ G  +    A   S   V++ G G  G LGHG R    +P+ +E   L   + 
Sbjct: 362 VQVLSVSCGSWHS---ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEA--LSGFRT 416

Query: 262 VVVAAGAWHAAVVGQDG----------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           + VA G WH+A + +            ++ TWG G    LGHG+++   VP  VQ+L D 
Sbjct: 417 MKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDY 476

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
               VA G   T  +S  G V++ G   +  LG N  +DG+         P  V   +  
Sbjct: 477 SFHQVACGHSMTIALSTSGHVFTMGSSSNGQLG-NPKSDGK--------QPIPVQD-RLS 526

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            E V +IS       + H   LT   ++Y +G G  G+LG
Sbjct: 527 GELVEEISCG-----SCHVAVLTSRSEVYTWGMGANGRLG 561



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 155/298 (52%), Gaps = 27/298 (9%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N + IA G  H+ AVT+ G +Y++G    + G LG+G     W P+ +   L+G++++  
Sbjct: 308 NVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSV 367

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G+  + L + +G+V+ FG  +FG   +G + T  V  P+ VE+L     ++ A G + 
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKRET--VGYPKEVEALSGFRTMKVACGLWH 425

Query: 161 TA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           +A            V+SR  ++YT+  G+  +LGH  + + + P   + +L +    Q+A
Sbjct: 426 SAAIVESSNHVSINVISR--KLYTWGAGDKNQLGHGDKDSRLVP-TCVQSLIDYSFHQVA 482

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G+   +AL+   +   V+++G    G+LG+  ++D K P  + Q +L       ++ G+
Sbjct: 483 CGHSMTIALS---TSGHVFTMGSSSNGQLGN-PKSDGKQPIPV-QDRLSGELVEEISCGS 537

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            H AV+     V TWG G  G LGHG  E +  P +V+AL D     +A G ++TT +
Sbjct: 538 CHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 595



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 30/281 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G V++FG  + G LGHG  E    P+ + +L G R ++ A G   +  I
Sbjct: 370 GSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAI 429

Query: 111 SDAG----------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            ++           ++Y +G     +  +G + ++LV  P  V+SL +    Q A G+  
Sbjct: 430 VESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLV--PTCVQSLIDYSFHQVACGHSM 487

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  LS  G V+T    ++ +LG + + +  +P P+   L    V +I+ G C++  L   
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLG-NPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLT-- 544

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
            S   VY+ G G  G+LGHG   D+K P L+E  +  +++ +   +        H  V G
Sbjct: 545 -SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSG 603

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
            D  VC+       +   R+ C   G   C   S  KV++A
Sbjct: 604 ADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKA 644



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 153/322 (47%), Gaps = 43/322 (13%)

Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
           I   G VY +G+       + G   Y      ++  P+ +ES   + V Q A G    A+
Sbjct: 211 IESLGDVYVWGEVWTDVIPAEGSTNYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 269

Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            +R+G V  F+WG +   RLGH T+ +   P  L+  L    V  IA G  +  A+    
Sbjct: 270 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYIACGEFHTCAVTA-- 324

Query: 222 SGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           SG  +Y+ G G    G LG+G+      P+ +    L  +Q + V+ G+WH+A+    G+
Sbjct: 325 SG-DLYTWGDGYYNVGLLGNGAGASHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSSGK 382

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------- 331
           V T+G G +G LGHG  E    PK V+AL+  + + VA G + +  + E  +        
Sbjct: 383 VFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVIS 442

Query: 332 --VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
             +Y++G G+   LGH       G++ +  L P  V SL  ++    Q++  +S+     
Sbjct: 443 RKLYTWGAGDKNQLGH-------GDKDSR-LVPTCVQSL--IDYSFHQVACGHSM----- 487

Query: 390 TFALTESGKLYAFGAGDKGQLG 411
           T AL+ SG ++  G+   GQLG
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLG 509



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 35/339 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H    T +G V+++G    G+LGHGT  +  RP+ + +L    +   A G   
Sbjct: 259 QIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFH 318

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQAAIGNFFTA 162
           T  ++ +G +Y +G    G    G+ G     S   P+ V   L+ + V+  + G++ +A
Sbjct: 319 TCAVTASGDLYTWGD---GYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSA 375

Query: 163 VLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           + +  G+V+TF  G    LGH        P +VE       L     +++A G  +  A+
Sbjct: 376 LTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVE------ALSGFRTMKVACGLWHSAAI 429

Query: 218 ACQPSGMAV-------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
               + +++       Y+ G G   +LGHG +     P  ++   L++     VA G   
Sbjct: 430 VESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQ--SLIDYSFHQVACGHSM 487

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
              +   G V T G    G LG+   + +    V   L+      ++ G     V++   
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRS 547

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           +VY++G G +  LGH  + D +         P LV +LK
Sbjct: 548 EVYTWGMGANGRLGHGGVEDKK--------KPTLVEALK 578


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 188/446 (42%), Gaps = 83/446 (18%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS  +  +GV+Y++GS   G+LGHG   E   PR +    G+ ++Q A G   T+ 
Sbjct: 311 AGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLA 370

Query: 110 ISDAGQVYAFGKD---SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++  G V+A+G      FGE E G  G  +V  P+ +  ++   V+  A G + +A ++ 
Sbjct: 371 LTHKGTVFAWGAGLALGFGEGEDGSGG--MVAVPKHLSDIEAA-VLNIAAGPYHSAAVTV 427

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP---------------HPLLGT------LENIPVV 205
            G +  +  G  +RLGH  + N   P                 +LG         ++ V+
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVL 487

Query: 206 QIAA------GYCYLLALACQPSGM-------AVYSVGCGLGGKLGHGS--RTDEKHPRL 250
            +            L +L C  S         AV+  G    G+LG G     D+  P  
Sbjct: 488 DVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVK 547

Query: 251 IEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           +E F      P+  +A G+ H   V Q G V  WG    G LG G       P  V AL 
Sbjct: 548 LECFS----TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 310 DVKAIHVATGD-YTTFVVS-------------EDGDVYSFGCGESASLGHNAIADGQGNR 355
             +A+ V  GD Y+  + S             E GD++++G  ES  LG      G+   
Sbjct: 604 --QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL-----GEDVA 656

Query: 356 HANVLTPQLVT-----------SLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
             ++LTPQ V            SL+ Q  +RV  +S +      +H+ A+T  G+ YA+G
Sbjct: 657 SGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWG 716

Query: 404 AGDKGQLGIELVNNQTERGNPERVDI 429
           AG  G+LGI    N      P R D 
Sbjct: 717 AGYYGRLGIGTTANAY---TPTRCDF 739



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 179/419 (42%), Gaps = 61/419 (14%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-----------RSLQGIRIIQ 99
           G  H++A++ +G +Y++G  S G LG G T + + P  +           +   G+  ++
Sbjct: 189 GADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVR 248

Query: 100 A--------AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           A        +AGA  +M  +  G ++ +G    G    G+   +   SP +V+ + +  +
Sbjct: 249 ADPVVVTCCSAGAKHSMACTSDGTLWTWGHG--GNGRLGLGHNRGSLSPAVVDYILDRDI 306

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           V    G+  +A + R+G +YT+  G   RLGH  +     P  + G    +PV+Q+A G 
Sbjct: 307 VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGT 365

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAW 269
            + LAL  + +   V++ G GL   LG G   D     +     L +++  V  +AAG +
Sbjct: 366 FHTLALTHKGT---VFAWGAGLA--LGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPY 420

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVV 326
           H+A V   G +  WG G    LGHG+++ +  PK V  L +   V  +    G       
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480

Query: 327 SEDGDVY----------------SFGCGESASL---GHNAI------ADGQGNRHANVLT 361
             D DV                 S  CGES ++   G  A+       DGQ     +V  
Sbjct: 481 YSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEE 540

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            Q     + V        +      + H  A+ + G ++A+GA D GQLG+ +V    E
Sbjct: 541 DQ----YEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFE 595



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 76/379 (20%)

Query: 62  GVVYSFGSNSSGQLGH----------------GTTEEE---W---RPRPIRSLQGIRIIQ 99
           G VY+FG  + G+LG+                G  +E+   W   +P  +R     +I +
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIAR 185

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            + GA  T+ +SD G +YA+G  S+G                         + Q    + 
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGN------------------------LGQGDTSDS 221

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           +T V     RVY    G++A  G   E   V      G +   PVV          ++AC
Sbjct: 222 YTPV-----RVYL---GSEAGSGKKKENVGV------GKVRADPVVVTCCSAGAKHSMAC 267

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              G  +++ G G  G+LG G       P +++   +L+   V V AG  H+A + + G 
Sbjct: 268 TSDG-TLWTWGHGGNGRLGLGHNRGSLSPAVVDY--ILDRDIVFVNAGDSHSACIDRQGV 324

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           + TWG G +G LGHG++    VP+ V+    V  + VA G + T  ++  G V+++G G 
Sbjct: 325 LYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG- 383

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
             +LG     DG G          +V   K +++  ++ ++ N      H+ A+T  G L
Sbjct: 384 -LALGFGEGEDGSGG---------MVAVPKHLSD--IEAAVLNIAAGPYHSAAVTVGGDL 431

Query: 400 YAFGAGDKGQLGIELVNNQ 418
             +G G   +LG     NQ
Sbjct: 432 LVWGVGGSSRLGHGDQQNQ 450



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 167/413 (40%), Gaps = 70/413 (16%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A TS G ++++G   +G+LG G       P  +  +    I+   AG   +  
Sbjct: 259 AGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSAC 318

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G +Y +G   FG   +G QG   +  P+ VE    + V+Q A G F T  L+ +G 
Sbjct: 319 IDRQGVLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGT 376

Query: 170 VYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           V  F+WG    LG   E  D       V  H  L  +E   V+ IAAG  +  A+     
Sbjct: 377 V--FAWGAGLALG-FGEGEDGSGGMVAVPKH--LSDIE-AAVLNIAAGPYHSAAVTV--- 427

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP----------------------RLIEQFQLLNLQ 260
           G  +   G G   +LGHG + ++  P                      RL  ++  L++ 
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVL 487

Query: 261 PVVVAAG----AW----------HAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKV 304
            V   +G    +W          H   +   G V  WG    G LG G   EE +  P  
Sbjct: 488 DVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVK 547

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           ++  +      +A G      V++ GDV+++G  ++  LG   +             P  
Sbjct: 548 LECFS-TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS--------FEPAA 598

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFAL-----TESGKLYAFGAGDKGQLGI 412
           VT+L+Q  +       +  I       ++     TE G L+A+GA + G+LG+
Sbjct: 599 VTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 150/381 (39%), Gaps = 49/381 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTML 109
           G  H+IA+T  G V+ +GSN  GQLG G   EE +  P++       I + A G+   + 
Sbjct: 508 GESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLA 567

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G V+A+G +  G+   GV   +    P  V +L+    V    G+ ++A ++  G 
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGV--VRPSFEPAAVTALRQ--AVDVFCGDDYSACITSLGG 623

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
             + S       G        E   L G  E++    I         L  Q    +V   
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKL-GLGEDVASGSI---------LTPQKVVFSVPVC 673

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            C L          D    +  ++   ++  P+   +G  H+  +   G    WG G YG
Sbjct: 674 ACSL----------DSLEMQAYKRVFCVSFSPL--CSGTSHSLAITAQGECYAWGAGYYG 721

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G       P        V+   VA G   +  +S DGD++ +G  E          
Sbjct: 722 RLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC------- 774

Query: 350 DGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                   N ++P++   L+      +V  IS +       H+ A+TE+G+++A+G    
Sbjct: 775 -----STTNYMSPRIFMQLEGQGGVPKVKSISASER-----HSLAVTEAGEVFAWGDNKL 824

Query: 408 GQLGIELVNNQTER-GNPERV 427
            Q G      Q ER   PERV
Sbjct: 825 YQTGCG--KRQAERLDRPERV 843



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 49/332 (14%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H +AV   G V+++G+N +GQLG G     + P  + +L+  + +    G   +  I
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACI 618

Query: 111 SDAGQVYAFGKDS---------FGEAEYGVQG------TKLVTSPQLV------------ 143
           +  G   +   ++         +G AE G  G      +  + +PQ V            
Sbjct: 619 TSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLD 678

Query: 144 ----ESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
               ++ K +F V  +    G   +  ++ +G  Y +  G   RLG  T  N   P    
Sbjct: 679 SLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTP-TRC 737

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
              + + +  +AAG C+ LAL+    G   +      G +    S T+   PR+  Q + 
Sbjct: 738 DFPKGVRLRSVAAGACHSLALSMD--GDLWF-----WGRREDTCSTTNYMSPRIFMQLEG 790

Query: 257 LNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 312
               P V  ++A   H+  V + G V  WG  +    G G  + E +  P+ V  L    
Sbjct: 791 QGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSA- 849

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              VATG   +F +   G+V++ G  +S  LG
Sbjct: 850 CQWVATGPQGSFFILASGEVFAAGVIKSGRLG 881



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 45/76 (59%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   +G  HS+A+T++G  Y++G+   G+LG GTT   + P      +G+R+   AAGA 
Sbjct: 694 SPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGAC 753

Query: 106 RTMLISDAGQVYAFGK 121
            ++ +S  G ++ +G+
Sbjct: 754 HSLALSMDGDLWFWGR 769


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  H++ + +  +V+S G NS GQLG         P P+++L+ ++    + G   
Sbjct: 27  QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + GV   K +  +P+ + +L  I ++Q + G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++ +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   +
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQPSPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
                S   G     G   +     P  I   +  NL  + ++ G  H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           +G    G LG+     +  P++V+ ++ + +     GD+T   V   G V SFG G SA+
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSAT 319



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + PR I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +F WG++     A  G + +    +P  + G L+N+ V+ I+ G  +   L+      
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V++ G    G+LG+    +++ P+L+E+   L  Q  +   G    A V   G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313

Query: 285 WGRYGCLGHGNEECE----SVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
            G        + E       +  ++ A  L DV+  H+  G Y  FV +
Sbjct: 314 RGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 30/318 (9%)

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G  ++QAA+G    +L+     V++ G++S G+   G +G      P+ V++LK +    
Sbjct: 22  GAELLQAASGERHALLLLTNSLVHSCGENSRGQ--LGRRGAPRWDLPEPVQALKTLKFDL 79

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
            + G   +  +  +GRV+ +  G++ +LG   E  ++   P  + TL  I ++Q++ G+ 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKITTLNGIKIIQVSCGHY 138

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
           + LAL+       V+S G    G+LG G     +  P+ +   + + L    VAAG  H+
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPL--AQVAAGGAHS 193

Query: 272 AVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
             +   G    WG    G L   G   +   + P  + AL ++  I+++ GD  T V+S+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           DG V++FG   S  LG++   + +G        PQLV   ++++  V QI          
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERIDGLVSQIDCGGD----- 297

Query: 389 HTFALTE-SGKLYAFGAG 405
           HT A    +G++ +FG G
Sbjct: 298 HTIAYVHTTGQVVSFGRG 315



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G     +L     V++    +  +LG    P    P P+   L+ +    ++ G
Sbjct: 25  LLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPV-QALKTLKFDLVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G G  G+LG G   +    PR I    L  ++ + V+ G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAGSEGQLGVGELKEINFTPRKITT--LNGIKIIQVSCGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +D +V +WG   +G LG G E   +  P+ V++L  +    VA G   +F +S 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +      
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVQVQSN--KPLSIGALKNLG--VIYISCGDE----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           HT  L++ GK++ FG    GQLG      +      ER+D
Sbjct: 247 HTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T ++S  G+V+ FG +S G+  Y     K    PQLVE +  +       G+   A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGLVSQIDCGGDHTIA 301

Query: 163 VLSREGRVYTFSWGNDA 179
            +   G+V +F  G  A
Sbjct: 302 YVHTTGQVVSFGRGPSA 318


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 156/343 (45%), Gaps = 41/343 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329

Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 200
           L     V   A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G LE
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGCLE 387

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            + V  +  G  +   +    S   +++ G G  G LGHG R   ++PR +E   L  L+
Sbjct: 388 GLHVASVTCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDRETVQYPREVES--LSGLR 442

Query: 261 PVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
            + V+ G WH A V +             G++ TWG G    LGHG+++    P  V AL
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPAL 502

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     +A G   T  ++  G V++ G      LG N   DG+         P LV   
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED- 552

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           K  +E V +IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 553 KLASEFVEEISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 24/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +++ G LGHG+    W P+ I   L+G+ +     G   T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            LI+  G+++ FG  +FG   +G + T  V  P+ VESL  +  +  + G + TA +   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                       G+++T+  G+  RLGH  +   ++P   +  L +    +IA G+   +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
            L    SG  V+++G  + G+LG+  +TD K P L+E  +L +     ++ GA+H A + 
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
               V TWG G  G LGHG+ E   VP +V+AL D    ++A G +YT  +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAI 624



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 142/312 (45%), Gaps = 41/312 (13%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 326

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 252
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
              L  L    V  G WH A++   GR+ T+G G +G LGHG+ E    P+ V++L+ ++
Sbjct: 384 GC-LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLR 442

Query: 313 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 494

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG    N QT+
Sbjct: 495 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG----NLQTD 543

Query: 421 RGNPERVDIDLS 432
              P  V+  L+
Sbjct: 544 GKLPCLVEDKLA 555



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 143/342 (41%), Gaps = 38/342 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGAG 105
           Q   G  H+  VT +G ++++G  S G+LGHG  ++ + PR + SL     +   A G  
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEF 344

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAV 163
            T  ++ AG++Y +G  +      G  G+ +      ++   L+ + V     G + TA+
Sbjct: 345 HTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGCLEGLHVASVTCGPWHTAL 403

Query: 164 LSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           ++  GR++TF  G    LGH        P +VE      +L  +  + ++ G  +  A+ 
Sbjct: 404 ITSYGRLFTFGDGTFGVLGHGDRETVQYPREVE------SLSGLRTIAVSCGVWHTAAVV 457

Query: 219 ---------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
                       S   +++ G G   +LGHG +     P  +      N   +       
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACG---- 513

Query: 270 HAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           H+  VG    G+V T G   YG LG+   + +    V   L       ++ G Y    ++
Sbjct: 514 HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
              +VY++G G +  LGH  + D +         P LV +LK
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRK--------VPTLVEALK 607


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 156/304 (51%), Gaps = 13/304 (4%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  QA  G  HS+ + S G V+S G N+ GQLG      E RP  I++L+ + +   + G
Sbjct: 22  EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTA 162
              ++ +   G+V+A+G  S  E + G++  K  + +P+ +++L  I ++Q + G++ + 
Sbjct: 82  KEHSLAVCHKGRVFAWGAGS--EGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSL 139

Query: 163 VLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            LS +G+VY  SWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ 
Sbjct: 140 ALSEDGQVY--SWGKNSQGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSL 196

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             +     S   G     G+ +      P  I   + L++  + ++ G  H AV+ Q+G+
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDV--IYISCGYEHTAVLTQNGK 254

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 338
           V T+G    G LG+     +  P+ V+ ++ + +  +  G Y T   V   G+V SFG G
Sbjct: 255 VFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVS-QIDCGSYHTLAYVYTTGEVVSFGRG 313

Query: 339 ESAS 342
            + +
Sbjct: 314 RNCA 317



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 109/241 (45%), Gaps = 31/241 (12%)

Query: 197 GTLENIP-------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
           G L  +P       V Q A G  + L L    S   V+S G    G+LG   +  E+ P 
Sbjct: 9   GQLRRVPTGAGGAEVRQAACGERHSLLLL---SDGTVHSCGDNTQGQLGRRGKPREERPG 65

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQ 306
           LI+  + L +   +V+ G  H+  V   GRV  WG G  G LG   EEC+     PK ++
Sbjct: 66  LIKALETLLVG--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI--EECKEKIFTPKKIK 121

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
            L  +K I V+ G Y +  +SEDG VYS+G      L       G G    +  +PQ V 
Sbjct: 122 TLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQL-------GLGKEFPSQASPQRVR 174

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 426
           SL+        I L       AH+FAL+ SG  + +G+ + GQL +   N   +R  P  
Sbjct: 175 SLE-------GIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHS 227

Query: 427 V 427
           +
Sbjct: 228 I 228



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 11/264 (4%)

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G  + QAA G   ++L+   G V++ G ++ G+   G +G      P L+++L+ + V  
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQL--GRRGKPREERPGLIKALETLLVGL 77

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            + G   +  +  +GRV+ +  G++ +LG       +     + TL  I ++Q++ G+ +
Sbjct: 78  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYH 137

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            LAL+       VYS G    G+LG G     +  P+ +   + + L    VAAG  H+ 
Sbjct: 138 SLALS---EDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSF 192

Query: 273 VVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
            +   G    WG    G L   G+        P  + AL  +  I+++ G   T V++++
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQN 252

Query: 330 GDVYSFGCGESASLGHNAIADGQG 353
           G V++FG      LG+N  A  +G
Sbjct: 253 GKVFTFGDNSCGQLGYNPTAKKRG 276



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 23/280 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           V QAA G   + +L  +G V++       +LG   +P +  P  L+  LE + V  ++ G
Sbjct: 23  VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPG-LIKALETLLVGLVSCG 81

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G G  G+LG    +     P+ I+   L  ++ + V+ G +
Sbjct: 82  KEHSLAV-CHKG--RVFAWGAGSEGQLGIEECKEKIFTPKKIKT--LTGIKIIQVSCGHY 136

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +DG+V +WG    G LG G E   ++ P+ V++L  +    VA G   +F +S 
Sbjct: 137 HSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 196

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G  + +G   +  L     A    N       P  + +LK ++  V+ IS         
Sbjct: 197 SGTSFGWGSNNTGQL-----ALSGNNTPVQRYKPHSIGALKSLD--VIYISCGYE----- 244

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           HT  LT++GK++ FG    GQLG    N   ++  P++V+
Sbjct: 245 HTAVLTQNGKVFTFGDNSCGQLG---YNPTAKKRGPQQVE 281


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 27/342 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS   G+LG G  EEE    PR +   Q   + QAA G   T+L++  G++Y  G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           +  G+  +          PQ + +L+N  V Q + G   +  L+  G++  FSWG++A  
Sbjct: 63  NDHGQLGHDTNNLP-NKRPQFISALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATG 119

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH  +        ++ ++    VVQI+ G+ + LAL    +   +++ G    G+LG 
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT---NSGELFAWGANEYGQLGL 176

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G+ T +K P       L  +    +A G  H+  V + G +  WG   +G LG  + +  
Sbjct: 177 GT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             P  ++ L  +   +++ GD  +  ++++G V++ G G    LGH          H N 
Sbjct: 236 CYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT--------HGNE 287

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 400
           + P++V  L  +  ++ QI+         HT A   S GK+Y
Sbjct: 288 ILPRMVFEL--MGSKITQIACGRK-----HTLAFVPSRGKVY 322



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
           QA  G  H++ +T  G +Y+ G+N  GQLGH T      RP+ I +L+   + Q + G  
Sbjct: 40  QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLS 99

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ +++ GQ++++G ++ G+  + +       +P++++S+    VVQ + G+     L+
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALT 158

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
             G +  F+WG +   +LG  T    V    L+ +L  IP+  IA G  +  + A   SG
Sbjct: 159 NSGEL--FAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNH--SFAVSKSG 214

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            A++  G    G+LG        +P  ++  + L ++   ++ G   +  + Q+G V T 
Sbjct: 215 -AIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR--YISCGDDFSVFLTQEGGVFTC 271

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
           G G +G LGHG    E +P++V  L   K   +A G  +T   V   G VY
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A+T+ G ++S+GSN++GQLGH      +  PR I+S+    ++Q + G 
Sbjct: 92  TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              + ++++G+++A+G + +G+   G  G K+ T+  LV+SL  I +   A G   +  +
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTA-TLVKSLAGIPIAFIACGGNHSFAV 210

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           S+ G +  F WG +   +LG +   +   P   L TL ++ V  I+ G  + + L  Q  
Sbjct: 211 SKSGAI--FGWGKNTFGQLGLNDLDSRCYPTQ-LKTLRSLGVRYISCGDDFSVFLT-QEG 266

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
           G  V++ G G  G+LGHG+  +E  PR++  F+L+  +   +A G  H  A V   G+V
Sbjct: 267 G--VFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 24/299 (8%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +Y +G    GE   G    + V +P+ ++  +   V QAA G   T +L+++G++YT   
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            +  +LGH T     +    +  LEN  V Q++ G  + LAL    +   ++S G    G
Sbjct: 63  NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119

Query: 236 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           +LGH         PR+I+      +  V ++ G  H   +   G +  WG   YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177

Query: 295 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
               + VP   +V++L  +    +A G   +F VS+ G ++ +G      LG N +    
Sbjct: 178 T-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---- 232

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +   P  + +L+ +  R +      S++       LT+ G ++  G G  GQLG
Sbjct: 233 ----DSRCYPTQLKTLRSLGVRYISCGDDFSVF-------LTQEGGVFTCGLGTFGQLG 280



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 283 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           WG   +G LG G  E E V  P+ +           A G   T ++++DG +Y+ G  + 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH+   +   N+      PQ +++L+  N  V Q+S   S     H+ ALT  G+L+
Sbjct: 66  GQLGHDT--NNLPNKR-----PQFISALE--NYIVTQVSCGLS-----HSLALTNWGQLF 111

Query: 401 AFGAGDKGQLGIEL 414
           ++G+   GQLG +L
Sbjct: 112 SWGSNATGQLGHDL 125


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 172/377 (45%), Gaps = 27/377 (7%)

Query: 16  RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI-------AGPGHSIAV 58
            ++L   CG S K V      L+ +  G+    + C  E  Q I       +     +  
Sbjct: 2   EEELPLSCGESGKPVQATLSSLKMVDVGKWPIFSLCSEEELQLIRQACVFGSASNEVLYT 61

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
           T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+
Sbjct: 62  TVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF 121

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC-YISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+L
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQ--MCSMAVVDAG-EVYVWGYNGNGQL 237

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G GS  ++  P  +   Q +++Q V  A G  H  V+  +G+V  WG   YG LG GN+ 
Sbjct: 238 GLGSSGNQPTPCRVAALQGIHVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGN 354
            +S P  +    D +  I      +T+   ++ G+VY +G C G+S +L H        +
Sbjct: 296 NQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSVTLPHLTRFSCTDD 355

Query: 355 RHANVLTPQLVTSLKQV 371
             A   TP +   L  V
Sbjct: 356 VFACFATPAVTWRLLSV 372



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ ++ + V           AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGIHVQRVACGY-------AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  + ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPISVE 306


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 160/342 (46%), Gaps = 41/342 (11%)

Query: 86  PRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           P  I SL  + +  + A G     L++  G+V+ +G++S G   +G+      + P LVE
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVE 311

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 200
            L    V   A G + T  +S  G ++T  WG    N   LGH TE +   P  + G LE
Sbjct: 312 FLAVNNVDFVACGEYHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLE 369

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 259
            + V+ +A G  +  ALA   S   +++ G G  G LGHG R    +PR   + Q+L+ L
Sbjct: 370 GLQVLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGL 423

Query: 260 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           + + VA G WH A    V+ Q G      ++ TWG G    LGHG++E   +P  V AL 
Sbjct: 424 KTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALI 483

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           D     +A G   T  ++  G V++ G      LG N ++DG+         P LV   K
Sbjct: 484 DYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGR--------LPCLVQD-K 533

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V E V +IS         H   LT   +++ +G G  G+LG
Sbjct: 534 LVGEFVEEISCG-----AYHVAVLTSRSEVFTWGRGANGRLG 570



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 33/290 (11%)

Query: 140 PQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 196
           P  +ESL +++V  + A G    A+++R+G V+T  WG ++  RLGH  + +   PH L+
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFT--WGEESGGRLGHGIDNDFSRPH-LV 310

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
             L    V  +A G  +  A++     +  +  G    G LGHG+      P+ +    L
Sbjct: 311 EFLAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG-PL 368

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
             LQ + VA G WH+A+   +G++ T+G G +G LGHG+ E    P+ VQ L+ +K I V
Sbjct: 369 EGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKV 428

Query: 317 ATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
           A G + T     V+S+ G       ++++G G+   LGH +            L P  V+
Sbjct: 429 ACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGS--------KETYLLPTCVS 480

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           +L   N    Q++  +++     T ALT SG ++  G    GQLG  L +
Sbjct: 481 ALIDYN--FHQLACGHTM-----TVALTTSGHVFTMGGTAYGQLGNPLSD 523



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 142/336 (42%), Gaps = 69/336 (20%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H   VT +G V+++G  S G+LGHG   +  RP  +  L    +   A G   T  +
Sbjct: 272 GVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAV 331

Query: 111 SDAGQVYAFGKD------------------------------------------------ 122
           S +G ++ +G                                                  
Sbjct: 332 STSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGK 391

Query: 123 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG----- 168
             +FG+  +GV G    + V  P+ V+ L  +  ++ A G + TA    V+S+ G     
Sbjct: 392 LFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISS 451

Query: 169 -RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            +++T+  G+  RLGH ++   + P   +  L +    Q+A G+   +AL    SG  V+
Sbjct: 452 RKLFTWGDGDKHRLGHGSKETYLLP-TCVSALIDYNFHQLACGHTMTVALTT--SGH-VF 507

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           ++G    G+LG+   +D + P L+ Q +L+      ++ GA+H AV+     V TWG G 
Sbjct: 508 TMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGA 565

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            G LGHG+ E    P  V+AL D     ++ G   T
Sbjct: 566 NGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFT 601



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 33/312 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   TS G +++FG  + G LGHG  E    PR ++ L G++ I+ A G   T  I
Sbjct: 379 GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 438

Query: 111 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
               S +G      +++ +G        +G + T L+  P  V +L +    Q A G+  
Sbjct: 439 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL--PTCVSALIDYNFHQLACGHTM 496

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T       +LG+      + P  +   L    V +I+ G  ++  L   
Sbjct: 497 TVALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQDKLVGEFVEEISCGAYHVAVLT-- 553

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
            S   V++ G G  G+LGHG   D + P  +E  +  N++ +       A+   H  V G
Sbjct: 554 -SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSG 612

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTT 323
            D  VC+       +   R+ C   G   C +       K   A    K   V    Y  
Sbjct: 613 ADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAK 672

Query: 324 FVVSEDGDVYSF 335
              +E GD   F
Sbjct: 673 LKAAEAGDASIF 684


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 155/345 (44%), Gaps = 61/345 (17%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +TS G V S GSN   QLG   +    +P P+ +LQ +RI+Q   G   
Sbjct: 55  QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT--KPEPVTALQCLRIVQVCCGQQH 112

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +++AGQVY +G +S G+   G +G +   SP+ V++L    VVQ A G+     L  
Sbjct: 113 SMALTEAGQVYMWGSNSKGQLGNG-EGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171

Query: 167 EGRVYTFSWGNDAR----LGHHTEPN--DVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            G +Y  +WG++      +G   EP    VE   LLG    +P+ QIA G  + + L+  
Sbjct: 172 NGALY--AWGDNGNGQLGIGTVGEPQRVPVEVTNLLG----LPLSQIACGANHSMVLS-- 223

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            SG+ ++  G    G+LG     D   P L++  +  +++   +AAG  H+A +   G V
Sbjct: 224 KSGV-IFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVK--FIAAGGAHSAALTAHGGV 280

Query: 281 CTWGW----------------------------------------GRYGCLGHGNEECES 300
            T+GW                                        G YG LGHG++  + 
Sbjct: 281 FTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQL 340

Query: 301 VPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 344
            P  +Q L       +A G  +T       G V++FG G +  LG
Sbjct: 341 TPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 52/381 (13%)

Query: 67  FGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           FG+ +SG+LG G  E+     PR I  L+GIR+ Q A GA  T++++  G+V + G +  
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH- 183
            +    V  TK    P+ V +L+ + +VQ   G   +  L+  G+VY +   +  +LG+ 
Sbjct: 81  DQLGQEVSTTK----PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNG 136

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
             + + + P   + TL    VVQIA G  + LAL    +  A+Y+ G    G+LG G+  
Sbjct: 137 EGQESRLSPR-FVKTLAPFTVVQIACGSNHCLALL---NNGALYAWGDNGNGQLGIGT-V 191

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            E     +E   LL L    +A GA H+ V+ + G +  WG  R+G LG  + +  + P 
Sbjct: 192 GEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPT 251

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-----------------CGESASLGHN 346
           +++ L       +A G   +  ++  G V++FG                     ++L   
Sbjct: 252 LLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARK 311

Query: 347 --AIADGQGNRHA-------------NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
             ++ + +  RH+             + LTP  +  L  +   + QI+L        HT 
Sbjct: 312 LFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQEL--MGTTITQIALG-----RCHTV 364

Query: 392 ALTES-GKLYAFGAGDKGQLG 411
               + GK++ FG G  GQLG
Sbjct: 365 CYAPTVGKVFTFGLGGNGQLG 385



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 28/201 (13%)

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           GLGG   H  R     PR I Q + + ++ +  A GA H  V+   GRV + G   +  L
Sbjct: 30  GLGGIEDHIVRV----PRSIPQLEGIRVRQI--ATGAHHTLVLTSHGRVLSCGSNDHDQL 83

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G   E   + P+ V AL  ++ + V  G   +  ++E G VY +G      LG+    +G
Sbjct: 84  GQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN---GEG 138

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q +R    L+P+ V +L      VVQI+  ++     H  AL  +G LYA+G    GQLG
Sbjct: 139 QESR----LSPRFVKTLAPFT--VVQIACGSN-----HCLALLNNGALYAWGDNGNGQLG 187

Query: 412 IELVNNQTERGNPERVDIDLS 432
           I  V      G P+RV ++++
Sbjct: 188 IGTV------GEPQRVPVEVT 202



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 23/196 (11%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  HS+ ++  GV++ +GSN  GQLG    ++   P  +++L+   +   AAG  
Sbjct: 210 SQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGA 269

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++  G V+ FG   +   E  +      ++P            Q+A+     +++ 
Sbjct: 270 HSAALTAHGGVFTFGWSFYESHEVRISLRGTESNP------------QSALARKLFSLIE 317

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           RE      S+G+  +LGH ++ + + P     L+GT     + QIA G C+ +  A  P+
Sbjct: 318 RE--FCRHSYGSYGQLGHGSKNDQLTPMKIQELMGT----TITQIALGRCHTVCYA--PT 369

Query: 223 GMAVYSVGCGLGGKLG 238
              V++ G G  G+LG
Sbjct: 370 VGKVFTFGLGGNGQLG 385



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 25/227 (11%)

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           LE I V QIA G  + L L    S   V S G     +LG    T +  P  +   Q L 
Sbjct: 48  LEGIRVRQIATGAHHTLVLT---SHGRVLSCGSNDHDQLGQEVSTTKPEP--VTALQCLR 102

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVA 317
           +  V V  G  H+  + + G+V  WG    G LG+G  +E    P+ V+ L     + +A
Sbjct: 103 I--VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIA 160

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G      +  +G +Y++G   +  LG   + + Q         P  VT+L       + 
Sbjct: 161 CGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQR-------VPVEVTNL-------LG 206

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
           + L+       H+  L++SG ++ +G+   GQLG+   ++  +R  P
Sbjct: 207 LPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGL---SDNKDRAFP 250


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 28/352 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           ++ +GS   G+LG G  E+E  + PR +  ++   + Q A G   T+ I+  G+VY+ G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           + +G+  +     +L    QL+  L      + A GN  T  ++  G+++++    + +L
Sbjct: 61  NDYGQLGHEKARKRL----QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G ++         ++  L    +VQIA G  + +AL    +   +Y+ G    G+LG GS
Sbjct: 117 GLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT---NDGELYAWGSNREGQLGLGS 173

Query: 242 -RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
             T E  P+ I     + +    +A G +H  V+ + G V +WG   +G LG  + +  +
Sbjct: 174 YTTTEIKPKRISTLAAVPI--AFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +P  ++ L + K  +   G+  +  ++ DG V++ G G    LGH       GN    +L
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGH-------GNTTNEIL 284

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
             Q+   ++ +   V QIS         HT AL  S G++YA+G G  GQLG
Sbjct: 285 PRQV---MELMGSTVTQISCGKR-----HTLALVPSRGRVYAWGLGGAGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 6/206 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HSIA+T+ G +Y++GSN  GQLG G+ T  E +P+ I +L  + I   A G  
Sbjct: 141 QIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGY 200

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T++IS +G V+++G+++FG+   G+   +    P  + +L+N  V  A  G  F+  L+
Sbjct: 201 HTIVISKSGAVFSWGRNTFGQL--GLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLT 258

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G V+T   G   +LGH    N++ P  ++  L    V QI+ G  + LAL   PS   
Sbjct: 259 MDGGVFTCGAGMYGQLGHGNTTNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 315

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
           VY+ G G  G+LG+ +      P+++
Sbjct: 316 VYAWGLGGAGQLGNRASQSATTPQVV 341



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  +++A+T +G VYS G+N  GQLGH    +  R + I  L      + A G   
Sbjct: 38  QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARK--RLQLIPGLDAFVFRKIACGNCH 95

Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           T+ +++ GQ++++G +  G+     V  T+ V  P++++ L    +VQ A G   +  L+
Sbjct: 96  TLAVNEWGQLFSWGCNMNGQLGLNSVDCTERV--PRMIKVLGTNVIVQIACGTEHSIALT 153

Query: 166 REGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            +G +Y  +WG++      LG +T   +++P   + TL  +P+  IA G  + + ++   
Sbjct: 154 NDGELY--AWGSNREGQLGLGSYT-TTEIKPKR-ISTLAAVPIAFIACGGYHTIVIS--K 207

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           SG AV+S G    G+LG         P  +    L N +      G   +  +  DG V 
Sbjct: 208 SG-AVFSWGRNTFGQLGLNDVQQRNLPCQLR--TLRNAKVCYATCGEEFSVFLTMDGGVF 264

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
           T G G YG LGHGN   E +P+ V  L       ++ G  +T  +V   G VY++G G +
Sbjct: 265 TCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324

Query: 341 ASLGHNA 347
             LG+ A
Sbjct: 325 GQLGNRA 331



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           ++  G  + G+LG G   DE    PR ++  +  N++ +  A G  +   + ++G+V + 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQI--ACGENYTVAITKEGKVYSC 58

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G   YG LGH  E+     +++  L+      +A G+  T  V+E G ++S+GC  +  L
Sbjct: 59  GNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G N++   +         P+++  L      +VQI+         H+ ALT  G+LYA+G
Sbjct: 117 GLNSVDCTER-------VPRMIKVLG--TNVIVQIACGTE-----HSIALTNDGELYAWG 162

Query: 404 AGDKGQLGIELVNNQTERGNPERV 427
           +  +GQLG  L +  T    P+R+
Sbjct: 163 SNREGQLG--LGSYTTTEIKPKRI 184



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 173 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           F WG+       LG   + N   P  +   +E   V QIA G  Y +A+  +     VYS
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPREV-DFIEASNVEQIACGENYTVAITKEGK---VYS 57

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LGH      K  +LI        + +  A G  H   V + G++ +WG    
Sbjct: 58  CGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKI--ACGNCHTLAVNEWGQLFSWGCNMN 113

Query: 289 GCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LG  + +C E VP++++ L     + +A G   +  ++ DG++Y++G      LG   
Sbjct: 114 GQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLG--- 170

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                G+     + P+ +++L  V    +            HT  +++SG ++++G    
Sbjct: 171 ----LGSYTTTEIKPKRISTLAAVPIAFIACG-------GYHTIVISKSGAVFSWGRNTF 219

Query: 408 GQLGIELVNNQTERGNP 424
           GQLG+   N+  +R  P
Sbjct: 220 GQLGL---NDVQQRNLP 233



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+I ++  G V+S+G N+ GQLG    ++   P  +R+L+  ++  A  G   ++ ++  
Sbjct: 201 HTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMD 260

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G    +++  P+ V  L    V Q + G   T A++   GRVY 
Sbjct: 261 GGVFTCGAGMYGQLGHGNTTNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 318

Query: 173 FSWGNDARLGHHTEPNDVEPHPLL 196
           +  G   +LG+    +   P  +L
Sbjct: 319 WGLGGAGQLGNRASQSATTPQVVL 342


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 12/298 (4%)

Query: 40  CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRII 98
           C      QA  G  H++ +T  G ++S G+N  GQLGH T      RP+ I SL+   + 
Sbjct: 33  CHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVT 92

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
             + G   ++ +++ GQV+++G +S G+  +     +  T+P++++++    VVQ A G 
Sbjct: 93  HVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTD-LQTYTTPRMIKTIATKTVVQIASGQ 151

Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           F +  L+  G +  FSWG +   +LG  T    V    L+ +L  IP+  IA G  +  +
Sbjct: 152 FHSLALTNSGEL--FSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNH--S 207

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            A   SG A++  G    G+LG         P+ ++   L NL    ++ G   +A + Q
Sbjct: 208 FAVSKSG-AIFGWGKNTFGQLGLNDLVSRCFPQQLK--TLRNLGVRYISCGDDFSAFLTQ 264

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
           +G V T G G +G LGHG    E +P++V  L   K   +A G  +T   V   G +Y
Sbjct: 265 EGGVFTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 164/344 (47%), Gaps = 31/344 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           VY +G+   G+LG G  E+E    PR +       + QAA G   T+L++  G++++ G 
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           +  G+  +          PQ + SL+N  V   + G   +  L+  G+V  FSWG+++  
Sbjct: 63  NDHGQLGHDTDCLP-NKRPQFISSLENYIVTHVSCGTTHSLALTNWGQV--FSWGSNSIG 119

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH T+        ++ T+    VVQIA+G  + LAL    +   ++S G    G+LG 
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALT---NSGELFSWGANGYGQLGL 176

Query: 240 GSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G+ T EK   P L++   L  +    +A G  H+  V + G +  WG   +G LG  +  
Sbjct: 177 GT-TGEKVVTPTLVKS--LAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLV 233

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
               P+ ++ L ++   +++ GD  +  ++++G V++ G G    LGH           +
Sbjct: 234 SRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTC--------S 285

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 400
           N + P++V  L  +  ++ QI+         HT A   S GK+Y
Sbjct: 286 NEILPRMVFEL--MGSKITQIACGRR-----HTLAFVPSRGKIY 322



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 26/300 (8%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VY +G    GE   G    + V  P+ ++   +  V QAA G   T +L+++G++++   
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 176 GNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            +  +LGH T+  PN   P   + +LEN  V  ++ G  + LAL    +   V+S G   
Sbjct: 63  NDHGQLGHDTDCLPNK-RPQ-FISSLENYIVTHVSCGTTHSLALT---NWGQVFSWGSNS 117

Query: 234 GGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
            G+LGH +       PR+I+      +  V +A+G +H+  +   G + +WG   YG LG
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTV--VQIASGQFHSLALTNSGELFSWGANGYGQLG 175

Query: 293 HGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G   E    P +V++L  +    +A G   +F VS+ G ++ +G      LG N +   
Sbjct: 176 LGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLV-- 233

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +   PQ + +L+ +  R +      S +       LT+ G ++  GAG  GQLG
Sbjct: 234 ------SRCFPQQLKTLRNLGVRYISCGDDFSAF-------LTQEGGVFTCGAGTFGQLG 280



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 21/193 (10%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           MAVY  G  + G+LG G   DE+   PR ++     ++Q    A G  H  ++ +DG++ 
Sbjct: 1   MAVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQ--AACGTSHTLLLTKDGKLF 58

Query: 282 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           + G   +G LGH + +C     P+ + +L +    HV+ G   +  ++  G V+S+G   
Sbjct: 59  SCGNNDHGQLGH-DTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH+   D Q        TP+++ ++    + VVQI+         H+ ALT SG+L
Sbjct: 118 IGQLGHD--TDLQ-----TYTTPRMIKTI--ATKTVVQIASG-----QFHSLALTNSGEL 163

Query: 400 YAFGAGDKGQLGI 412
           +++GA   GQLG+
Sbjct: 164 FSWGANGYGQLGL 176


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--------WRPRPIRSLQGIRII 98
           Q   G  HS+ +   G V+S G+N   QLGH   + +        W     +S  GI +I
Sbjct: 56  QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVI 115

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQA 154
             A G    + +++ G ++++G + +G+   GV+   +V     P++ E +L NI  VQ 
Sbjct: 116 SVACGDAHCVALTNDGHLFSWGSNVYGQL--GVERMNVVAKARYPRIQEINLANI--VQI 171

Query: 155 AIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
           A G N   A+ S +G ++ +   +  +LG  T  + + P   +  L  IP+ Q+AAG  +
Sbjct: 172 ACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGP-TTVNKLMGIPICQLAAGASH 230

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
            L L   PSG  V+  G  + G++G   + D  +P L+   +LL  Q V+ +A G   + 
Sbjct: 231 SLVLT--PSG-TVFGWGKNMFGQIGQNEQRDILYPSLV---KLLRTQKVIRLACGEDFSV 284

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            V   G + T+G G YG LGHGN+  E  PK V  L     + VA G   T  ++E+  +
Sbjct: 285 AVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITEN-KL 343

Query: 333 YSFGCGESASLG 344
           Y+FG   S  LG
Sbjct: 344 YAFGLNTSGQLG 355



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 173/377 (45%), Gaps = 50/377 (13%)

Query: 68  GSNSSGQLGHGTTEEEWRPRPIRSL-------QGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           G+ S GQLG G   EE     +RSL         ++I Q A G   ++++ D G V++ G
Sbjct: 22  GNTSDGQLGLGGIAEE----NVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCG 77

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLK----------NIFVVQAAIGNFFTAVLSREGRV 170
            + F   + G  G K    P L E+L            I V+  A G+     L+ +G +
Sbjct: 78  NNDF--YQLGHDGIK--RKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHL 133

Query: 171 YTFSWGNDARLGHHTEPNDV---EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
             FSWG++       E  +V     +P +  +    +VQIA G  + LAL  + +   ++
Sbjct: 134 --FSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL--ESTDGVLH 189

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G+R     P  + +  L+ +    +AAGA H+ V+   G V  WG   
Sbjct: 190 AWGLNDHGQLGIGTRESFIGPTTVNK--LMGIPICQLAAGASHSLVLTPSGTVFGWGKNM 247

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G +G   +     P +V+ L   K I +A G+  +  V+  G +++FG G    LGH  
Sbjct: 248 FGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGH-- 305

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                GN+++ +   Q++  +  V   V+ ++         HT A+TE+ KLYAFG    
Sbjct: 306 -----GNQNSELFPKQVMELMGSV---VLDVACG-----RCHTLAITEN-KLYAFGLNTS 351

Query: 408 GQLGIELVNNQTERGNP 424
           GQLG+  V + T    P
Sbjct: 352 GQLGLLNVKHTTSIPLP 368



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G+ G  G   E   S+  V    N +K   +A G + + ++ +DG V+S G  +   LGH
Sbjct: 27  GQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH 86

Query: 346 NAIADGQGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           + I             P L  +L     V +  V I + +    +AH  ALT  G L+++
Sbjct: 87  DGIKR----------KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSW 136

Query: 403 GAGDKGQLGIELVNNQTERGNPERVDIDLS 432
           G+   GQLG+E +N   +   P   +I+L+
Sbjct: 137 GSNVYGQLGVERMNVVAKARYPRIQEINLA 166


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 159/326 (48%), Gaps = 18/326 (5%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 113
           +I VT    V++ G+N SG LG G T+    PR I  L G +II  + G G  ++I+ A 
Sbjct: 34  AIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATAD 93

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 172
           G+VYA+G + + +   G     L  +P LV + L    V + + G+  T  L+ +G VY 
Sbjct: 94  GEVYAWGHNGYSQLGNGTTNHGL--TPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYA 151

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           + + N  ++G  +  N   P  +   L+N  VV IA G   L ++A   +G   Y  G  
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDNG-ETYGWGYN 208

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G+  +++ P  I   Q +N+  + VA G  H   +  +G V +WG   YG LG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQGINI--IQVACGYAHTLALTDEGFVYSWGANSYGQLG 266

Query: 293 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHN 346
            GN+  ++VP ++    + + +V A H +   +T+   ++ G V  +G C G++ +  H 
Sbjct: 267 TGNKSNQAVPTLINMDKERMVEVAACHTS---HTSAAKTQSGQVLMWGQCRGQAVAYPHL 323

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVN 372
                  +  A   TP +   L  V+
Sbjct: 324 THFTSTDDVFACFATPAVTWHLLSVD 349



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 23/288 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
           GP H +  T+ G VY++G N   QLG+GTT     P  + + L G R+ + + G+  T+ 
Sbjct: 84  GP-HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VYA+G ++ G+   G    +   +P+ V S L+N  VV  A G   +  +   G
Sbjct: 143 LTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNG 200

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
             Y + +  + +LG     N   P   +  L+ I ++Q+A GY + LAL     G  VYS
Sbjct: 201 ETYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGINIIQVACGYAHTLALT--DEGF-VYS 256

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 287
            G    G+LG G+++++  P LI   +   ++  V A    H +A   Q G+V  WG  R
Sbjct: 257 WGANSYGQLGTGNKSNQAVPTLINMDKERMVE--VAACHTSHTSAAKTQSGQVLMWGQCR 314

Query: 288 YGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVY 333
              + +        P +    + +DV A   AT   T  ++S DGD Y
Sbjct: 315 GQAVAY--------PHLTHFTSTDDVFAC-FATPAVTWHLLSVDGDDY 353



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 9/167 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 104
           ++   G  H+IA+T+ G VY++G N+SGQ+G G+T  +  PR + S LQ   ++  A G 
Sbjct: 131 TEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 190

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +M + D G+ Y +G +  G+   G  G +   +P  + +L+ I ++Q A G   T  L
Sbjct: 191 LCSMAVLDNGETYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGINIIQVACGYAHTLAL 248

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           + EG VY  SWG ++  +LG   + N  +  P L  ++   +V++AA
Sbjct: 249 TDEGFVY--SWGANSYGQLGTGNKSN--QAVPTLINMDKERMVEVAA 291



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 152/321 (47%), Gaps = 27/321 (8%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P  +R ++   +  +AA     + ++D  +V+A G +  G    G+  T+    P+ ++ 
Sbjct: 15  PEELRLIRQACVFGSAANEAIYVTVND--EVFALGTNCSGC--LGLGDTQSTIEPRRIDI 70

Query: 146 LKNIFVVQAAIGNFFTAVLSR-EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
           L    ++  + G     V++  +G VY  +WG++  ++LG+ T  + + P  +   L   
Sbjct: 71  LCGKKIISLSYGTGPHVVIATADGEVY--AWGHNGYSQLGNGTTNHGLTPALVSTNLIGK 128

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V +++ G  + +AL    +   VY+ G    G++G GS  ++  PR +    L N   V
Sbjct: 129 RVTEVSCGSHHTIALT---TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKVVV 184

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +A G   +  V  +G    WG+   G LG GN   +  P  + AL  +  I VA G   
Sbjct: 185 NIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAH 244

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           T  ++++G VYS+G      L       G GN+ +N   P L+   K   ER+V+++  +
Sbjct: 245 TLALTDEGFVYSWGANSYGQL-------GTGNK-SNQAVPTLINMDK---ERMVEVAACH 293

Query: 383 SIYWNAHTFALTESGKLYAFG 403
           + + +A   A T+SG++  +G
Sbjct: 294 TSHTSA---AKTQSGQVLMWG 311



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 24/208 (11%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P L+    L+  +   V+ G+ H   +  DG V  WG+
Sbjct: 96  VYAWGHNGYSQLGNGTTNHGLTPALVST-NLIGKRVTEVSCGSHHTIALTTDGEVYAWGY 154

Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 342
              G +G G+   +  P+ V + L +   +++A G   +  V ++G+ Y +G  C     
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLG 214

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+N      GN+     TP  + +L+ +N  ++Q++        AHT ALT+ G +Y++
Sbjct: 215 LGNN------GNQQ----TPCRIAALQGIN--IIQVACGY-----AHTLALTDEGFVYSW 257

Query: 403 GAGDKGQLGIELVNNQTERGNPERVDID 430
           GA   GQLG     N++ +  P  +++D
Sbjct: 258 GANSYGQLG---TGNKSNQAVPTLINMD 282


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 17/268 (6%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           + Q A G+     ++ +  ++++  G    LG  T  +  EP  L+  +E         G
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLI--IEKKDYTYFIEG 348

Query: 211 Y-CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
             C      C      + + G G GG+LGHG   D   P+ I  + L   +P+ ++AG  
Sbjct: 349 IACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEI--YDLSKKKPIFISAGES 406

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H+A + +   + TWG G YG LGHG +  E  PK+++ L+  + IHV+ G + T  ++  
Sbjct: 407 HSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ 466

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYW 386
           G VY+FG G+   LG N     +  R      P+ ++  K   +  E +VQ     +I  
Sbjct: 467 GTVYAFGQGKYGKLGIN-----RKQREGVFSRPEKISFYKVGVEPQEMLVQ-DKNEAILA 520

Query: 387 NA---HTFALTESGKLYAFGAGDKGQLG 411
            A   H+  L +SGK+Y++G   KG LG
Sbjct: 521 AAGYNHSLCLAKSGKIYSWGYNGKGLLG 548



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR-LIEQFQLLNLQP 261
           P+ Q+A G  ++LA+        ++S G G  G LG G+R D   PR LI + +      
Sbjct: 290 PITQVACGSAHILAIT---EDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFI 346

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
             +A G +H+  + +  ++ TWG G+ G LGHG+E+   VPK +  L+  K I ++ G+ 
Sbjct: 347 EGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGES 406

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            +  +SE  ++Y++G G    LGH      +         P+L+  L Q    ++ +S  
Sbjct: 407 HSAAISEKLNLYTWGTGTYGRLGHGMDTSEK--------KPKLIEDLDQY--EIIHVSCG 456

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                  HT A+T  G +YAFG G  G+LGI     +     PE++
Sbjct: 457 A-----FHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKI 497



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 181/427 (42%), Gaps = 62/427 (14%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQA-AA 102
           +Q   G  H +A+T    ++S+GS   G LG GT ++ + PR   I        I+  A 
Sbjct: 292 TQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIAC 351

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   +M ++   ++  +G+   G   +G +   LV  P+ +  L     +  + G   +A
Sbjct: 352 GKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLV--PKEIYDLSKKKPIFISAGESHSA 409

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +S +  +YT+  G   RLGH  + ++ +P  L+  L+   ++ ++ G  + LA+  Q +
Sbjct: 410 AISEKLNLYTWGTGTYGRLGHGMDTSEKKP-KLIEDLDQYEIIHVSCGAFHTLAITGQGT 468

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE---KHPRLIEQFQLLNLQP-----------VVVAAGA 268
              VY+ G G  GKLG   +  E     P  I  F  + ++P           ++ AAG 
Sbjct: 469 ---VYAFGQGKYGKLGINRKQREGVFSRPEKIS-FYKVGVEPQEMLVQDKNEAILAAAGY 524

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGH--GNEE-------------CESVPKVVQALN--DV 311
            H+  + + G++ +WG+   G LG   G EE                +P + + +   D+
Sbjct: 525 NHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDL 584

Query: 312 K--------AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           K         I VA G   T  ++  G+VY FG      L  +   D    R        
Sbjct: 585 KQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKD--KDQTTFRKYKKQDQN 642

Query: 364 LVTSLKQVNERVVQISL-------TNSIYWNA----HTFALTESGKLYAFGAGDKGQLGI 412
                 Q  +   Q+SL       T  I + A    H FA++   +L+ +G  D+GQLG+
Sbjct: 643 NNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGL 702

Query: 413 ELVNNQT 419
             V++ T
Sbjct: 703 GFVSDFT 709



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 93/432 (21%), Positives = 178/432 (41%), Gaps = 61/432 (14%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP- 86
           +L+ R  L  E     E  Q   G  +++++T+ G VY FGSN+ GQL     +  +R  
Sbjct: 577 ELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKY 636

Query: 87  ------------RPIRSLQ-----------GIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
                       + + S +            +RI   A G      IS   +++ +G++ 
Sbjct: 637 KKQDQNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRND 696

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG- 182
            G+   G   +     P L+  + +  +   A G+ ++A +S  G ++      + +LG 
Sbjct: 697 EGQLGLGF-VSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGL 755

Query: 183 -HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ------PSGMAVYSVGCGLGG 235
               +   +    L+  L   P+  +A G  ++LA+A          GM  YS G    G
Sbjct: 756 GQALKKGFLLSFTLIQNLA--PIKSVACGPNHMLAIADYNPDHPIKDGMC-YSWGRNWKG 812

Query: 236 KLGHGSRTDEKHPRLI----EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           +LG GS+ D   P+ I    E+F+        VA G   +  +    +V  WG  +Y C 
Sbjct: 813 QLGIGSKEDSNVPKKIHNAKERFK-------KVACGQDFSIGLTYGNQVYLWGNNKYFCD 865

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
               ++ + +P+++QAL   +   +A       V+++ G++  +G   +  +  N   D 
Sbjct: 866 SKITKDVD-IPQLLQALEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDK 924

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +   H  +        +++ +  +  IS   +     H+ A++    LY +G  + G+LG
Sbjct: 925 KSQNHLAITK----FPMRKFDFLMETISAGQN-----HSAAVSVKRSLYTWGHAEGGRLG 975

Query: 412 IELVNNQTERGN 423
           +    N+ E  N
Sbjct: 976 L----NEKEYKN 983



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 25/285 (8%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +N Q IA G  +S AV++ G ++  G+  +G+LG G   ++        +Q +  I++ A
Sbjct: 721 KNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVA 780

Query: 103 -GAGRTMLISD--------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            G    + I+D         G  Y++G++  G+   G+   +    P+ + + K  F  +
Sbjct: 781 CGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQL--GIGSKEDSNVPKKIHNAKERFK-K 837

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A G  F+  L+   +VY   WGN+          DV+   LL  LE   +  IA  Y +
Sbjct: 838 VACGQDFSIGLTYGNQVYL--WGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKF 895

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVV--VAAGAW 269
              L  +     +   G  L  ++    + D+K      I +F +     ++  ++AG  
Sbjct: 896 CSVLNDKGE---ILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQN 952

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESV---PKVVQALNDV 311
           H+A V     + TWG    G LG   +E ++    P +VQ+++D+
Sbjct: 953 HSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHDI 997



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 147/379 (38%), Gaps = 71/379 (18%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG------------- 94
           A AG  HS+ +   G +YS+G N  G LG     EE  P  I  + G             
Sbjct: 520 AAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELI 579

Query: 95  ------------IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL------ 136
                         +IQ A G   T+ +++ G+VY FG +++G+       T        
Sbjct: 580 QRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQ 639

Query: 137 -----VTSPQLVESLKNIFVVQ-----------AAIGNFFTAVLSREGRVYTFSWGNDAR 180
                  + Q ++S + + +++            A G      +SR   ++ +   ++ +
Sbjct: 640 DQNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQ 699

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LG     +      L+  + +  +  IA G  Y  A++   +   ++  G    GKLG G
Sbjct: 700 LGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVS---AFGELFVTGNLENGKLGLG 756

Query: 241 SRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVG--------QDGRVCTWGWGRYGCL 291
                K   L+    + NL P+  VA G  H   +         +DG   +WG    G L
Sbjct: 757 QAL--KKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQL 814

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G G++E  +VPK +    + +   VA G   +  ++    VY +G        +    D 
Sbjct: 815 GIGSKEDSNVPKKIHNAKE-RFKKVACGQDFSIGLTYGNQVYLWG-------NNKYFCDS 866

Query: 352 QGNRHANVLTPQLVTSLKQ 370
           +  +  ++  PQL+ +L+Q
Sbjct: 867 KITKDVDI--PQLLQALEQ 883


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 152/342 (44%), Gaps = 40/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     +++  G+VY +G+   G    G +    ++SP++V++
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDISSPKIVDT 352

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLEN 201
           L +I V   A G + T  L+  G VY  +WGND       +   +      H L   +E 
Sbjct: 353 LSDIRVKNVACGEYHTCALTDSGEVY--AWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEG 410

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I +  IA G  +   ++   S   +++ G G  G LGHGS      P+ +E  + L ++ 
Sbjct: 411 ISISSIACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRS 467

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           V  A G WH A + +            G++ TWG    G LGH +   + VP  V  L D
Sbjct: 468 V--ACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVD 525

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
              + V+ G   T  ++  G V++ G  +   LG+  + D      A V+       LKQ
Sbjct: 526 YDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD-----RAVVVEGM----LKQ 576

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
             E V  IS       + H   LT SG +Y +G G+ G+LG+
Sbjct: 577 --EYVKMISCG-----SYHVAVLTSSGSVYTWGKGENGELGL 611



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 138/301 (45%), Gaps = 41/301 (13%)

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
           E  VQ +     P+L+ES   + V   A+G    A+++++G VY +  G   RLG   + 
Sbjct: 283 ERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDM 342

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
            D+    ++ TL +I V  +A G  +  AL    SG  VY+     G  +      DE  
Sbjct: 343 -DISSPKIVDTLSDIRVKNVACGEYHTCALT--DSG-EVYA----WGNDVSCSDLVDEGR 394

Query: 248 PRLIEQFQLLNLQPV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
            R       L+L PV       +A G WH A+V   GR+ T+G G +G LGHG+    S 
Sbjct: 395 IRSQWLTHKLSL-PVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSS 453

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIAD 350
           PK V++L  +    VA G + T  + E            G ++++G  +   LGH   AD
Sbjct: 454 PKEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGH---AD 510

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                + N L P  V+ L  V+   VQ+S    +     T ALT  GK++A G+   GQL
Sbjct: 511 -----NVNKLVPTCVSQL--VDYDFVQVSCGRMM-----TLALTNMGKVFAMGSAKYGQL 558

Query: 411 G 411
           G
Sbjct: 559 G 559



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 25/292 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGR 106
            G  H+ A+T  G VY++G++   S  +  G    +W    +   ++GI I   A G   
Sbjct: 363 CGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWH 422

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-- 164
           T ++S  G+++ +G  +FG   +G   +   +SP+ VESLK + V   A G + TA +  
Sbjct: 423 TAIVSSCGRLFTYGDGTFGVLGHGSYHS--FSSPKEVESLKGLCVRSVACGTWHTAAIIE 480

Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
                    +  G+++T+   ++ RLGH    N + P   +  L +   VQ++ G    L
Sbjct: 481 ISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLVDYDFVQVSCGRMMTL 539

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVV 274
           AL    +   V+++G    G+LG+    D    R +    +L  + V +++ G++H AV+
Sbjct: 540 ALT---NMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVL 592

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
              G V TWG G  G LG G+ E    P  V+AL D +   +  G   T  +
Sbjct: 593 TSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAI 644



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 102/253 (40%), Gaps = 25/253 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+  V+S G ++++G  + G LGHG+      P+ + SL+G+ +   A G  
Sbjct: 414 SSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTW 473

Query: 106 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            T  I           +  G+++ +G    G   +     KLV  P  V  L +   VQ 
Sbjct: 474 HTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLV--PTCVSQLVDYDFVQV 531

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
           + G   T  L+  G+V+        +LG+ H +   V    + G L+   V  I+ G  +
Sbjct: 532 SCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV---VVEGMLKQEYVKMISCGSYH 588

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 268
           +  L    S  +VY+ G G  G+LG G   +   P  +E     Q   +   P    A  
Sbjct: 589 VAVLT---SSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAIC 645

Query: 269 WHAAVVGQDGRVC 281
            H  +   D   C
Sbjct: 646 LHKPISISDQSSC 658


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 165/334 (49%), Gaps = 30/334 (8%)

Query: 34  LLAGEACCRRENSQA--IAGPGH-SIAVTSKGVVYSF--GSNSSGQLGHGTTEEEWRPRP 88
           L+A  A  R E+ +A  ++GP   S+       +Y F  G + + QLG G  + +  P+ 
Sbjct: 145 LVADVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKL 204

Query: 89  IRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           + +L   G  II  + GA     I   G+++ +G    G    G++  K V  P  V+ L
Sbjct: 205 VSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGR--LGLKSGKDVPYPTRVDFL 262

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
           K+  +V    G + +A +S + +V+T+  G+  +LGH  + ++  P  +   L +IP+VQ
Sbjct: 263 KDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSV-AALHHIPIVQ 321

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ------ 260
           +A GY ++ AL+       VY+ G G  G+LGHG       P+ +    LL L+      
Sbjct: 322 VALGYEHMAALSLDGD---VYTWGEGEHGQLGHGDLNSCSTPKKL----LLELENTTGEV 374

Query: 261 -----PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKA 313
                PV++A GA    ++   GR+ ++G   +G LG G +   + P ++ +  ++  + 
Sbjct: 375 ADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRF 434

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +H++ GD     V+  G+VY++G G   ++G  A
Sbjct: 435 VHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 130/297 (43%), Gaps = 13/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H  A+ S G ++++G    G+LG  + ++   P  +  L+   I+    G   +  I
Sbjct: 221 GADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACI 280

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S   +V+ +G  S G+  +  +  + +  P+ V +L +I +VQ A+G    A LS +G V
Sbjct: 281 SHDMKVFTWGSGSKGQLGHVEKSDEWL--PRSVAALHHIPIVQVALGYEHMAALSLDGDV 338

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA----- 225
           YT+  G   +LGH    +   P  LL  LEN        G   LLA     + +      
Sbjct: 339 YTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGR 398

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           + S G    G LG G +     P LI    +   + V ++AG  H A V   G V TWG 
Sbjct: 399 LISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQ 458

Query: 286 GRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G +G +G      + N      P  ++   D +A   + G   T ++S+DG V   G
Sbjct: 459 GCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 14/250 (5%)

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           R+  +Y F+WG        T     +P P L+ TL  +    I   Y      A   +G 
Sbjct: 174 RDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTG- 232

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
            +++ G    G+LG  S  D  +P  ++    L  + +V V  G + +A +  D +V TW
Sbjct: 233 KLFTWGLCDHGRLGLKSGKDVPYPTRVD---FLKDEVIVDVTCGMYSSACISHDMKVFTW 289

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G  G LGH  +  E +P+ V AL+ +  + VA G      +S DGDVY++G GE   L
Sbjct: 290 GSGSKGQLGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQL 349

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAF 402
           GH       G+ ++     +L+  L+     V  +     +   A  T  LT+ G+L +F
Sbjct: 350 GH-------GDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISF 402

Query: 403 GAGDKGQLGI 412
           G  + G LG+
Sbjct: 403 GMSEFGALGL 412



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%)

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           T  Q    L+ I + + A+ +   ++LS +G     S      L   T      P P L 
Sbjct: 80  TPNQAPRFLEQISISEGAVDSEAHSLLSPQGTSEENSKVEQGALDSSTAFFPTAPQPCLL 139

Query: 198 TLENIPVVQIAA---------GYCYLLALACQP---SGMAVYSVGCGLGGKLGHGSRTDE 245
             E   V  +AA               AL+ QP     + +++ GC    +LG G    +
Sbjct: 140 DAEKQLVADVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQ 199

Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
             P+L+     L    + V+ GA H A +   G++ TWG   +G LG  + +    P  V
Sbjct: 200 PFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRV 259

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
             L D   + V  G Y++  +S D  V+++G G    LGH   +D           P+ V
Sbjct: 260 DFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE--------WLPRSV 311

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +L  +   +VQ++L        H  AL+  G +Y +G G+ GQLG
Sbjct: 312 AALHHIP--IVQVALGYE-----HMAALSLDGDVYTWGEGEHGQLG 350



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGI--------RI 97
           Q   G  H  A++  G VY++G    GQLGHG       P+  +  L+            
Sbjct: 321 QVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSP 380

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAA 155
           +  A GA  T++++D G++ +FG   FG    G+   +L   P L+ S  +     V  +
Sbjct: 381 VLLACGASVTLILTDYGRLISFGMSEFG--ALGLGEKRLAARPHLITSRIMDKRRFVHLS 438

Query: 156 IGNFFTAVLSREGRVYTF------SWGNDARLGHHTEPNDVEPHPL 195
            G+   A ++ +G VYT+      + G  AR  +   P+  +P+ L
Sbjct: 439 AGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKL 484


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 174/387 (44%), Gaps = 40/387 (10%)

Query: 53   GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAAGAGRTM 108
            G ++AV S G  Y++G N+ GQLG GT  +  +P    +P  +      +Q +AG  +++
Sbjct: 677  GFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSL 736

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIFVVQAAIGNFFTAVLS 165
             +   G VYA+G +  G+   G  G       +++   +    +  VQ + G + +  L 
Sbjct: 737  AVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALD 796

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-------VVQIAAGYCYLLALA 218
              G ++ + +     LG+    N   P     TL   P        +Q++ G+ +  A+ 
Sbjct: 797  ARGNIWAWGFNQFGELGNGNNINSAIP-----TLAQYPRDAGTVTAIQVSGGFHHTAAID 851

Query: 219  CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQD 277
             + +    +S G    G+LG+G+  D   P  ++  +    ++ + V+AGA H+ ++   
Sbjct: 852  TKGN---TWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTK 908

Query: 278  GRVCTWGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            G    WGW + G LG+G+   ++ P     K  +    V AI V+ G Y +  + ++G+ 
Sbjct: 909  GNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNA 968

Query: 333  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            +++G  +S  LG    +  +         P LV   K     V  + ++   Y   H+  
Sbjct: 969  WAWGGNDSGELGIGTTSKSE--------IPALVQYPKNAGA-VTTVQVSAGGY---HSLG 1016

Query: 393  LTESGKLYAFGAGDKGQLGIELVNNQT 419
            + + GK +A+G    GQLG   ++N +
Sbjct: 1017 IDKEGKTWAWGYNQFGQLGNGTISNSS 1043



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 23/321 (7%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ------GIRIIQA 100
            Q  AG   S+AV S G VY++G+N SGQLG+G++   +   P+R +       G+  +Q 
Sbjct: 727  QVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSS-GGYSTVPLRVIDPNDPRSGLTAVQV 785

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +AG   ++ +   G ++A+G + FGE   G    + + T  Q       +  +Q + G  
Sbjct: 786  SAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFH 845

Query: 160  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE--NIPVVQIAAGYCYLLAL 217
             TA +  +G  +++ W    +LG+    +   P P+    +   +  +Q++AG  + L +
Sbjct: 846  HTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLII 905

Query: 218  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPVVVAAGAWHAA 272
              + +    ++ G    G+LG+GS + + +P     +  E    +    + V+AG +H+ 
Sbjct: 906  DTKGN---TWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTA--IQVSAGGYHSL 960

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVVSED 329
             + ++G    WG    G LG G      +P +VQ   +   V  + V+ G Y +  + ++
Sbjct: 961  AIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKE 1020

Query: 330  GDVYSFGCGESASLGHNAIAD 350
            G  +++G  +   LG+  I++
Sbjct: 1021 GKTWAWGYNQFGQLGNGTISN 1041



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 13/307 (4%)

Query: 23   CGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE 82
             GG   + LR +   +        Q  AG  HS+A+ ++G ++++G N  G+LG+G    
Sbjct: 760  SGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNIN 819

Query: 83   EWRP---RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
               P   +  R    +  IQ + G   T  I   G  +++G + FG+   G      +  
Sbjct: 820  SAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPV 879

Query: 140  P-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLG 197
            P Q       +  +Q + G   + ++  +G  + + W     LG+ +   D  P P ++ 
Sbjct: 880  PVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVK 939

Query: 198  TLEN---IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
              EN   +  +Q++AG  +  +LA   +G A ++ G    G+LG G+ +  + P L++  
Sbjct: 940  YPENAGTVTAIQVSAGGYH--SLAIDKNGNA-WAWGGNDSGELGIGTTSKSEIPALVQYP 996

Query: 255  QLLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            +    +  V V+AG +H+  + ++G+   WG+ ++G LG+G     S+P  V A N  + 
Sbjct: 997  KNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQLGNGTISNSSIPTPV-AFNLSQV 1055

Query: 314  IHVATGD 320
            I   T D
Sbjct: 1056 ISSVTFD 1062


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  108 bits (271), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 40/337 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
           G  H+  +T+  +VYS GSN++GQLG G    + +  P  + +L   + I  A GA  T+
Sbjct: 124 GDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTL 183

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAV 163
           + ++ G VY++G+  FG    G    + +  P+L+    +       ++Q + G  F+A+
Sbjct: 184 VCTERGDVYSWGQGIFGALGAGNLDDQFL--PKLIHISHDQLSTKSQMIQVSAGMRFSAI 241

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQP 221
           L + GRVYT    +  +LG      D E  P+  +++  P  V  IA G  +LL L  Q 
Sbjct: 242 LDQSGRVYTCGQNDAGQLG--IGGRDQENIPI--SIKKFPERVSMIACGQMHLLMLTKQG 297

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +   VYS G    G+LG  ++ +   P LI+    + ++   VAAG++ A++    G + 
Sbjct: 298 T---VYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMR--YVAAGSFSASISYDSGDLY 352

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG G +G            P  V+ +  +  + V+ G++    V++DG VYS+G   S 
Sbjct: 353 LWGSGVFGEF--------LTPHRVKTIKGM-TVSVSIGNHFGIAVNQDGIVYSWGHNNSG 403

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
            LG     +          TPQ++    Q+N+++V +
Sbjct: 404 ELGQGDFDERP--------TPQIIN---QLNDKIVTL 429



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 94/355 (26%), Positives = 158/355 (44%), Gaps = 39/355 (10%)

Query: 64  VYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           ++S+GS+ +GQLG G ++  +  P P      I I   + G      I+    VY+ G +
Sbjct: 84  IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSN 143

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           + G+   G    K+  SP LVE+L +   +  A G   T V +  G VY++  G    LG
Sbjct: 144 TNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALG 203

Query: 183 HHTEPNDVEP------HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
                +   P      H  L T   +  +Q++AG  +   L    SG  VY+ G    G+
Sbjct: 204 AGNLDDQFLPKLIHISHDQLSTKSQM--IQVSAGMRFSAIL--DQSGR-VYTCGQNDAGQ 258

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           LG G R  E  P  I++F     +  ++A G  H  ++ + G V + G   +G LG  N+
Sbjct: 259 LGIGGRDQENIPISIKKFPE---RVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNK 315

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              S P ++Q ++ +   +VA G ++  +  + GD+Y +G G                  
Sbjct: 316 RNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEF------------- 362

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              LTP  V ++K +    V +S+ N         A+ + G +Y++G  + G+LG
Sbjct: 363 ---LTPHRVKTIKGM---TVSVSIGNHF-----GIAVNQDGIVYSWGHNNSGELG 406



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 226 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           ++S G    G+LG G S+  + +P  + ++   N+    V+ G  HAA +     V + G
Sbjct: 84  IFSWGSDQAGQLGLGQSQIGKSYP--VPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMG 141

Query: 285 WGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
               G LG G+   + ++ P +V+AL D K I +A G   T V +E GDVYS+G G   +
Sbjct: 142 SNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGA 201

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG        GN     L   +  S  Q++ +   I ++  + ++A    L +SG++Y  
Sbjct: 202 LG-------AGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSA---ILDQSGRVYTC 251

Query: 403 GAGDKGQLGI 412
           G  D GQLGI
Sbjct: 252 GQNDAGQLGI 261



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 14/174 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H + +T +G VYS G+NS GQLG         P  I+ +  I +   AAG+ 
Sbjct: 281 SMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSF 340

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              +  D+G +Y +G   FGE            +P  V+++K +  V  +IGN F   ++
Sbjct: 341 SASISYDSGDLYLWGSGVFGE----------FLTPHRVKTIKGM-TVSVSIGNHFGIAVN 389

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 218
           ++G VY++   N   LG      D  P P ++  L +  V  ++ G  + +AL 
Sbjct: 390 QDGIVYSWGHNNSGELGQGD--FDERPTPQIINQLNDKIVTLVSCGRNFSIALG 441



 Score = 39.3 bits (90), Expect = 4.2,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 280 VCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           + +WG  + G LG G  +  +S P       ++   +V+ GD     ++    VYS G  
Sbjct: 84  IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSN 143

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
            +  LG   ++    N      +P LV +L  ++++ + I+   +     HT   TE G 
Sbjct: 144 TNGQLGVGDMSLKMKN------SPMLVEAL--MDQKPISIACGAN-----HTLVCTERGD 190

Query: 399 LYAFGAGDKGQLGIELVNNQ 418
           +Y++G G  G LG   +++Q
Sbjct: 191 VYSWGQGIFGALGAGNLDDQ 210


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 162/361 (44%), Gaps = 29/361 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H  +  S   VY +GSNSS QL  G+ ++   P+   S    + I+A  G   T +I   
Sbjct: 356 HGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQQIEA--GQYCTFVIFPD 413

Query: 114 GQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           G V+A GK S+G    G     T+L       E L              T  L+ +G+VY
Sbjct: 414 GFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGH-TLALTLDGKVY 472

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           ++  G+  +LGH        P  + G L N  V  IAAGY +  A+        +Y+ G 
Sbjct: 473 SWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT---EDGELYTWGE 529

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
           G  G+LGHG       P  ++    +      VA G+ H   V QDG+ V ++G G  G 
Sbjct: 530 GDYGRLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGK 585

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LGH +      PKV++AL  +    V  G   +  ++  G VY +GCG S          
Sbjct: 586 LGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSL--------- 636

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           G G+  A   TP+L+ +L+  +  VV IS+ +S     H  ALT+   +YA+G    GQ 
Sbjct: 637 GTGSVDATSATPKLLLALQ--SHSVVDISVGDS-----HCVALTQDNNVYAWGNNSMGQC 689

Query: 411 G 411
           G
Sbjct: 690 G 690



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%), Gaps = 16/274 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTMLISD 112
           H++A+T  G VYS+G    G+LGHG ++ +  P+ +    G +++   AAG   +  +++
Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTE 520

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
            G++Y +G+  +G   +G   ++ V  P  V+ + N  V Q A G+  T  +S++G+ V+
Sbjct: 521 DGELYTWGEGDYGRLGHGDNNSRNV--PVQVKDVAN--VGQVACGSAHTVCVSQDGQTVW 576

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           +F  G++ +LG H++ N V    ++  L+ + + ++  G    LAL    S   VY  GC
Sbjct: 577 SFGSGDNGKLG-HSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALT---STGQVYVWGC 632

Query: 232 GLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
             G  LG GS       P+L+   Q  ++  V ++ G  H   + QD  V  WG    G 
Sbjct: 633 --GPSLGTGSVDATSATPKLLLALQSHSV--VDISVGDSHCVALTQDNNVYAWGNNSMGQ 688

Query: 291 LGHGNEECE-SVPKVVQALNDVKAIHVATGDYTT 323
            G G+     + PK V  L+ V    ++ G   T
Sbjct: 689 CGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHT 722



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 14/188 (7%)

Query: 47  QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H++ V+  G  V+SFGS  +G+LGH  T   ++P+ I +LQG+ I +   G+ 
Sbjct: 557 QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQ 616

Query: 106 RTMLISDAGQVYAFG-KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            ++ ++  GQVY +G   S G     V  T    +P+L+ +L++  VV  ++G+     L
Sbjct: 617 CSLALTSTGQVYVWGCGPSLGTG--SVDATS--ATPKLLLALQSHSVVDISVGDSHCVAL 672

Query: 165 SREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +++  VY  +WGN++      GH T P   +P  +LG L+ + V QI+AG  + +A    
Sbjct: 673 TQDNNVY--AWGNNSMGQCGQGHCTTP-ITKPKKVLG-LDGVAVHQISAGTSHTVAWTAL 728

Query: 221 PSGMAVYS 228
           P    V S
Sbjct: 729 PMDRQVVS 736



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 20/175 (11%)

Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           +L +Q+    ++  +    ++H      +  V  WG      L  G+ +   VPK+  + 
Sbjct: 335 KLADQYAKCTVKSGITGEVSFHGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPKLATSF 394

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
              + I    G Y TFV+  DG V++ G G    LG   + D               T L
Sbjct: 395 GSAQQIE--AGQYCTFVIFPDGFVHACGKGSYGRLG---LGDSTNQ-----------TQL 438

Query: 369 KQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 421
           K++N     +  S+++S   + HT ALT  GK+Y++G GD G+LG    N+QT++
Sbjct: 439 KRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKLGHG--NSQTQK 491


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 154/307 (50%), Gaps = 16/307 (5%)

Query: 42  RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           R + +  I+ G  HS  +T  G +Y+FGSN  GQLG G  +   +P  ++SL+   +   
Sbjct: 34  RNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV 93

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   T++ + AG++Y+FG  S G  + G    +  TSPQL+   +  + + +A G   
Sbjct: 94  ACGRSHTIVCTKAGRLYSFGAGSDG--QLGTGDAQCATSPQLINLPEQKYKLLSA-GTDH 150

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           +A L+ +G +Y +  G++ +LG     +   P  L     +  V  ++ GY Y  A+   
Sbjct: 151 SAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL---KFHSSVSWVSCGY-YHTAIVTD 206

Query: 221 PSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                +Y+ G    GKLG       D   P+ +E    +  +  +VA G  H AV+   G
Sbjct: 207 DG--KLYTFGEKEFGKLGLTEDQLEDTTTPKHVES---ITEKIKLVACGGAHTAVISDVG 261

Query: 279 RVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            + T+G G +G LG+G    + S+P+ V  L++ K  +V+ GD  T V++E G +Y+FG 
Sbjct: 262 NLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGD 321

Query: 338 GESASLG 344
           G    LG
Sbjct: 322 GRHGKLG 328



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 169/357 (47%), Gaps = 38/357 (10%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           +   G +++FG +   +       + W    IR+ + + I   + G   + +I+++G++Y
Sbjct: 9   IPETGAIFTFGKS---RFADNLPSKFW----IRNDKAMHI---SCGDEHSAIITESGRLY 58

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            FG + +G+   G+   K  T P  V+SLK   V   A G   T V ++ GR+Y+F  G+
Sbjct: 59  TFGSNDWGQ--LGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
           D +LG  T        P L  L       ++AG  +  AL    +   +Y  G G  G+L
Sbjct: 117 DGQLG--TGDAQCATSPQLINLPEQKYKLLSAGTDHSAALTTDGT---LYMWGSGSEGQL 171

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G G+    + P+ ++    ++     V+ G +H A+V  DG++ T+G   +G LG   ++
Sbjct: 172 GLGNTDSVETPKELKFHSSVSW----VSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQ 227

Query: 298 CE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
            E  + PK V+++ + K   VA G   T V+S+ G++Y+FG G    LG+       G  
Sbjct: 228 LEDTTTPKHVESITE-KIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGN-------GPS 279

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              +  PQ V  L +   + V          + HT  +TE G +Y FG G  G+LGI
Sbjct: 280 LLQLSLPQKVARLSEHKCKYVSCG-------DNHTAVITEKGAMYTFGDGRHGKLGI 329



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 24/264 (9%)

Query: 42  RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           ++E    +A G  H+I  T  G +YSFG+ S GQLG G  +    P+ I +L   +    
Sbjct: 86  KQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQKYKLL 144

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           +AG   +  ++  G +Y +G  S  E + G+  T  V +P+ ++   ++  V  + G + 
Sbjct: 145 SAGTDHSAALTTDGTLYMWGSGS--EGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYH 200

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           TA+++ +G++YTF      +LG   +   +   P  +    E I +V     +  +++  
Sbjct: 201 TAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDV 260

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
                  +Y+ G G+ G+LG+G         +K  RL E       +   V+ G  H AV
Sbjct: 261 GN-----LYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEH------KCKYVSCGDNHTAV 309

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEE 297
           + + G + T+G GR+G LG   E+
Sbjct: 310 ITEKGAMYTFGDGRHGKLGISEED 333


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV   Q+  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 8/170 (4%)

Query: 44  ENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQ 99
            N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++ 
Sbjct: 150 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT 209

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            A G    M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G  
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYA 267

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            T VL+ EG+VY +   +  +LG   + N   P P+  T+E   +++IAA
Sbjct: 268 HTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TMEKDRIIEIAA 315



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  V +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTME 306



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 30  VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
           V+  +  G+ CC              +AV   G VY +G N +GQLG G++  +  P  +
Sbjct: 206 VVVTIACGQMCC--------------MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251

Query: 90  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
            +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P  +E    I
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEK-DRI 310

Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWG 176
             + A      +A  ++ G VY   WG
Sbjct: 311 IEIAACHSTHTSAAKTQGGHVYM--WG 335


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 156/301 (51%), Gaps = 14/301 (4%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  QA +G  HS+ + S G ++S+G NS GQLG    + + +P+ I +L+ +R+   + G
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCG 83

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ +   G+V+A+G  S G+   G +  ++   P+ +++L +I ++Q + G+  +  
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142

Query: 164 LSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           LS +GR++T+   +  +LG   E P+   P   +  L+ IP+ Q+AAG  +  AL+   S
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECPSQASPQ-RVQFLDGIPLTQVAAGGAHSFALSL--S 199

Query: 223 GMAVYSVGCGLGGKLGHGSR----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           G A +  G    G+L    +         P  ++  +  NL  V ++ G  H AV+ Q G
Sbjct: 200 G-ASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALE--NLGVVYISCGYEHTAVLTQTG 256

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGC 337
           +V T+G   YG LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG 
Sbjct: 257 KVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFGR 315

Query: 338 G 338
           G
Sbjct: 316 G 316



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 158/332 (47%), Gaps = 35/332 (10%)

Query: 85  RPRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 140
           RP P+R       G  + QAA+G   ++L+   G+++++G +S G+   G +  +    P
Sbjct: 9   RPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQP 66

Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTL 199
           + + +L+ + V   + G   +  +  +GRV+ +  G++ +LG   E N++   P  + TL
Sbjct: 67  KRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGI-GEFNEINLIPRKIKTL 125

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
            +I ++Q++ G+ + LAL+       +++ G    G+LG G     +     ++ Q L+ 
Sbjct: 126 TDIKIIQVSCGHHHSLALS---EDGRLFTWGSNSHGQLGLGKECPSQASP--QRVQFLDG 180

Query: 260 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAI 314
            P+  VAAG  H+  +   G    WG    G L    +    V    P  V AL ++  +
Sbjct: 181 IPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVV 240

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
           +++ G   T V+++ G V++FG      LG++  A  +G        PQLV     ++  
Sbjct: 241 YISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEG--------PQLVEG---IDGL 289

Query: 375 VVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 405
           V QI        + HT A +  +GK+ +FG G
Sbjct: 290 VSQIDCG-----SYHTLAYVYTTGKVVSFGRG 316



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 17/192 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           ++S G    G+LG      ++ P+ I   + L +   +V+ G  H+  V   GRV  WG 
Sbjct: 44  LHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVD--LVSCGKEHSLAVCYKGRVFAWGA 101

Query: 286 GRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G  G LG G   E   +P+ ++ L D+K I V+ G + +  +SEDG ++++G      LG
Sbjct: 102 GSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLG 161

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                  Q        +PQ V  L         I LT      AH+FAL+ SG  + +G+
Sbjct: 162 LGKECPSQA-------SPQRVQFLD-------GIPLTQVAAGGAHSFALSLSGASFGWGS 207

Query: 405 GDKGQLGIELVN 416
             +GQL +   N
Sbjct: 208 NSEGQLALRKKN 219



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 29/266 (10%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           QAA G   + +L   G ++++   +  +LG        +P   +  LE + V  ++ G  
Sbjct: 27  QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPK-RIPALETLRVDLVSCGKE 85

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHA 271
           + LA+  +     V++ G G  G+LG G   +    PR I+   L +++ + V+ G  H+
Sbjct: 86  HSLAVCYKGR---VFAWGAGSEGQLGIGEFNEINLIPRKIKT--LTDIKIIQVSCGHHHS 140

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             + +DGR+ TWG   +G LG G E   ++ P+ VQ L+ +    VA G   +F +S  G
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSG 200

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLT-----PQLVTSLKQVNERVVQISLTNSIY 385
              SFG G S S G  A+      R  NV       P  V +L+ +   VV IS      
Sbjct: 201 A--SFGWG-SNSEGQLAL------RKKNVPVVQSSKPCSVDALENLG--VVYISCGYE-- 247

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLG 411
              HT  LT++GK++ FG    GQLG
Sbjct: 248 ---HTAVLTQTGKVFTFGGNSYGQLG 270


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 21/279 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP--RPIRSLQGIRIIQAAAGAGRTMLIS 111
           H+  VT +G V+++G  S G+LGHG  ++  +P  R    L+G+++     G   T L++
Sbjct: 289 HAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVT 348

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
             GQ++ FG  +FG   +G +    V  P+ VESL  +  +  A G + TA +       
Sbjct: 349 SMGQLFTFGDGTFGVLGHGNREN--VAYPREVESLAGLRTIAVACGVWHTAAVVEVIVTQ 406

Query: 165 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
               +  G+++T+  G+  RLGH  +   +EP   +  L +    +IA G+   + L   
Sbjct: 407 SSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPT-CVPALIDYNFHKIACGHSLTVGLT-- 463

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            +   V+++G  + G+LG+    D K P L+E  +L       +A GA+H A +     V
Sbjct: 464 -TAGHVFTMGSTVYGQLGNPC-ADGKVPCLVED-KLYGESVEEIACGAYHVAALTSRNEV 520

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 521 YTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVKYIACG 559



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 132/284 (46%), Gaps = 32/284 (11%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGT 198
           P+ +ES   + V   A G    A+++R+G V+T+   +  RLGH    + ++P   + G 
Sbjct: 269 PRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGP 328

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           LE +   Q+A+  C     A   S   +++ G G  G LGHG+R +  +PR +E   L  
Sbjct: 329 LEGL---QVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVE--SLAG 383

Query: 259 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           L+ + VA G WH A V +            G++ TWG G    LGHG++E    P  V A
Sbjct: 384 LRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPA 443

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
           L D     +A G   T  ++  G V++ G      LG N  ADG+         P LV  
Sbjct: 444 LIDYNFHKIACGHSLTVGLTTAGHVFTMGSTVYGQLG-NPCADGK--------VPCLVED 494

Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            K   E V +I+     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 495 -KLYGESVEEIAC--GAY---HVAALTSRNEVYTWGKGANGRLG 532



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 19/235 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS G +++FG  + G LGHG  E    PR + SL G+R I  A G   T  +
Sbjct: 340 GPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAV 399

Query: 111 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +            G+++ +G        +G +  +L   P  V +L +    + A G+ 
Sbjct: 400 VEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRL--EPTCVPALIDYNFHKIACGHS 457

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  L+  G V+T       +LG+      V P  +   L    V +IA G  ++ AL  
Sbjct: 458 LTVGLTTAGHVFTMGSTVYGQLGNPCADGKV-PCLVEDKLYGESVEEIACGAYHVAALT- 515

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             S   VY+ G G  G+LGHG   D K P ++E  +  +++   +A GA ++A +
Sbjct: 516 --SRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVK--YIACGANYSAAI 566


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 149/325 (45%), Gaps = 21/325 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            A  G  H++ V   G + SFG N  GQLG G T  E  P+P+R L GIR+ QA+     
Sbjct: 322 HAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYH 381

Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           +++  D G+VY FG++ FG+   G V   KL   P LVESL+   +   A G + T V +
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGSGDVIDRKL---PCLVESLRGQRITTLACGQYHTVVST 438

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            E  V +    +  +LG  +  +  +   + G L+   V  +  GY + + L  +     
Sbjct: 439 LEIGVQSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEH--- 495

Query: 226 VYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           V+  G    G+LG G  T     P +IE  Q  ++    ++AG +H  ++  DG +  +G
Sbjct: 496 VFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHV--YRISAGCYHTVLIDADGMLFVFG 553

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS--EDGDVYSFGCGESAS 342
              +G LG G+      P  V      +   VA G Y T V++  +   +     GE+ S
Sbjct: 554 RNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVLTGGDKEGLSDLHSGEATS 613

Query: 343 -------LGHNAIADGQ--GNRHAN 358
                  L H A+A  Q  GN + N
Sbjct: 614 RFSPYKILNHPALAVPQDSGNDNEN 638



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 157/364 (43%), Gaps = 28/364 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           V++ G NS G+LGH  T        ++  +G  ++  AAG   T+L+   G+VY  G + 
Sbjct: 233 VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYND 292

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
            G+   G      V +   ++  +    V A  G   T V+  +G++ +F +    +LG 
Sbjct: 293 NGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQ 352

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
               ++  P P+ G L  I V Q +  Y Y   +AC      VY+ G    G+LG G   
Sbjct: 353 GNTSSEPVPKPVRG-LNGIRVTQASCSY-YHSVIACD--NGEVYTFGRNDFGQLGSGDVI 408

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           D K P L+E  +   +    +A G +H  V   +  V + G   YG LG   E  ES  K
Sbjct: 409 DRKLPCLVESLRGQRI--TTLACGQYHTVVSTLEIGVQSCGKNDYGQLGL--ESTESQRK 464

Query: 304 VVQA---LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            V     L+  +  HV  G Y T V++ +  V+ FG  +   L       G G+    V 
Sbjct: 465 FVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQL-------GLGHTTQRVF 517

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P ++   ++  + V +IS     Y   HT  +   G L+ FG    GQLG     +  E
Sbjct: 518 GPTIIEGAQE--KHVYRISA--GCY---HTVLIDADGMLFVFGRNHHGQLG---TGDTNE 567

Query: 421 RGNP 424
           R +P
Sbjct: 568 RHSP 571



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 10/305 (3%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--EWRPRPIRSLQGIRIIQA 100
           RE     AG  H++ + S G VY+ G N +GQ G GTT+        PI   +    + A
Sbjct: 264 REVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHA 323

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
             G   T+++ D GQ+ +FG +  G+   G   ++ V  P+ V  L  I V QA+   + 
Sbjct: 324 YNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPV--PKPVRGLNGIRVTQASCSYYH 381

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           + +    G VYTF   +  +LG      DV    L   +E++   +I    C        
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGS----GDVIDRKLPCLVESLRGQRITTLACGQYHTVVS 437

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
              + V S G    G+LG  S T+ +   +  + +L   Q   V  G +H  V+  +  V
Sbjct: 438 TLEIGVQSCGKNDYGQLGLES-TESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHV 496

Query: 281 CTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
             +G   YG LG G+       P +++   +     ++ G Y T ++  DG ++ FG   
Sbjct: 497 FGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNH 556

Query: 340 SASLG 344
              LG
Sbjct: 557 HGQLG 561



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 37/261 (14%)

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           E  V+T    +   LGH ++    + H L+   E   VV +AAG  + + L    S   V
Sbjct: 230 EREVWTCGQNSYGELGH-SDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLC---STGEV 285

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---------VVVAAGAWHAAVVGQD 277
           Y+ G    G+ G G+          ++  +L   P         V    G  H  VV  D
Sbjct: 286 YTAGYNDNGQCGQGT---------TQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDD 336

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G++ ++G+   G LG GN   E VPK V+ LN ++    +   Y + +  ++G+VY+FG 
Sbjct: 337 GQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGR 396

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
            +   LG   + D +         P LV SL+   +R+  ++         HT   T   
Sbjct: 397 NDFGQLGSGDVIDRK--------LPCLVESLR--GQRITTLAC-----GQYHTVVSTLEI 441

Query: 398 KLYAFGAGDKGQLGIELVNNQ 418
            + + G  D GQLG+E   +Q
Sbjct: 442 GVQSCGKNDYGQLGLESTESQ 462



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 100/234 (42%), Gaps = 16/234 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +QA     HS+     G VY+FG N  GQLG G   +   P  + SL+G RI   A G  
Sbjct: 373 TQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQY 432

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFT 161
            T++          G  S G+ +YG  G +   S +   ++K       V     G + T
Sbjct: 433 HTVV-----STLEIGVQSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHT 487

Query: 162 AVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            VL+ E  V+ F   +  +LG  HT      P  + G  E   V +I+AG CY   L   
Sbjct: 488 IVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEK-HVYRISAG-CYHTVL-ID 544

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             GM ++  G    G+LG G   +   P  +  F  L  +   VAAG +H  V+
Sbjct: 545 ADGM-LFVFGRNHHGQLGTGDTNERHSPFPVSTF--LGKRIAKVAAGFYHTIVL 595


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 40/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L++  G+V+ +G+  +G    G +    ++SP++V+S
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGR--LGQKIDMDISSPKIVDS 352

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L  + V   A G + T  L+  G VYT  WGND      L      +   P  L G L+ 
Sbjct: 353 LNGLHVKTVACGEYHTCALTDSGEVYT--WGNDVCCADLLNEGRTRSQWIPQRLGGPLDG 410

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I +  +A G  +   ++   S   +++ G G  G LGHG       P+ +E    L ++ 
Sbjct: 411 ISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRS 467

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
              A G+WH A + +            G++ TWG G  G LGH +   + VP  V  L D
Sbjct: 468 A--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVD 525

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
              + V+ G   T  ++  G V++ G  +   L         GN HA     ++V    Q
Sbjct: 526 YDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL---------GNPHAR---DKVVIVEGQ 573

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           + +  V++  T S     H   LT +G +Y +G G+ GQLG+
Sbjct: 574 LKQEFVKVISTGSY----HVAVLTSAGSVYTWGRGEIGQLGL 611



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 23/290 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+T  G VY++G++   +  L  G T  +W P+ +   L GI I   A G   T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            ++S  G+++ +G  +FG   +G    +  +SP+ VESL  + V  AA G++ TA +   
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEV 481

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                   S  G+++T+  G++ RLGH    N + P   +  L +   VQ++ G    +A
Sbjct: 482 MFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVP-TRVTQLVDYDFVQVSCGRMLTVA 540

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G    G+LG+    D+    +I + QL      V++ G++H AV+  
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVKVISTGSYHVAVLTS 594

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            G V TWG G  G LG G+ E    P  V+AL D +   +  G   T  +
Sbjct: 595 AGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAI 644



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 23/253 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+  V+S G ++++G  + G LGHG       P+ + SL G+R+  AA G+ 
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSW 473

Query: 106 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            T  I           S +G+++ +G    G   +   G K+V  P  V  L +   VQ 
Sbjct: 474 HTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIV--PTRVTQLVDYDFVQV 531

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           + G   T  L+  G+V+        +LG+    + V    + G L+   V  I+ G  ++
Sbjct: 532 SCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV--IVEGQLKQEFVKVISTGSYHV 589

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGAW 269
             L    S  +VY+ G G  G+LG G   D   P  +E     Q   +   P   AA   
Sbjct: 590 AVLT---SAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAICL 646

Query: 270 HAAVVGQDGRVCT 282
           H  +   D   C+
Sbjct: 647 HKPISISDQSTCS 659



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 30/170 (17%)

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-GHGNEEC- 298
           +R D++H + +    L++     V       + V +D  V  WG G  GCL G  NE   
Sbjct: 235 TRIDKEHKKNLSDSYLMHFTTPHVGK-----SNVLKD--VMIWGGG-IGCLVGIVNERFV 286

Query: 299 -----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
                  VPK++++   +   ++A G     +V++ G+V+ +G G+   LG     D   
Sbjct: 287 HPGIYSLVPKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMD--- 343

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
                + +P++V SL  ++ + V            HT ALT+SG++Y +G
Sbjct: 344 -----ISSPKIVDSLNGLHVKTVACG-------EYHTCALTDSGEVYTWG 381


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV   Q+  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G    M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P+  T+E   +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 315



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           +AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D GQ
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VYA+G +S+G+   G +  +   +P  VE    I  + A      +A  ++ G VY   W
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--W 334

Query: 176 G 176
           G
Sbjct: 335 G 335



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 174/385 (45%), Gaps = 42/385 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HSIA+ S G V ++G N  GQLG GT  +   P  ++ L  +  I  A GA  
Sbjct: 62  QVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTAI--AGGAWH 119

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ ++  G V+ +G +  G+   G   TK    P  V +LKNI  + +         L  
Sbjct: 120 SVALTSDGTVWTWGSNWAGQLGDGT--TKSRNKPVQVNNLKNITAIASK--GLHNLALKS 175

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G V+T  WG +   +LG  T  +   P   + T     ++ IA G  + LA   Q +  
Sbjct: 176 DGTVWT--WGRNIYGQLGDGTTTDRNTP---VQTRSLNTIISIAGGGYHSLA---QKADG 227

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            +++ G    G+LG G+ T+   P L+   + +++    +  G  H+ V+  +G +  WG
Sbjct: 228 TIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSM----IRCGGDHSIVLKNNGTIWIWG 283

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           + ++G LG  + +  S P  +  L ++  I    GD+ + ++  DG V+++G  E+  LG
Sbjct: 284 FNQHGQLGDRSTDNRSTPVPMGDLKNIMTID-GGGDH-SLILKSDGTVWTWGNNENGQLG 341

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                DG     A   TP   ++L  V                 H+ AL   G ++A+G+
Sbjct: 342 -----DGTTMSRA---TPIQASTLSNVTAIASG---------EQHSIALKSDGTIWAWGS 384

Query: 405 GDKGQLGIELVNNQTERGNPERVDI 429
              GQLG   ++N   R  P  V I
Sbjct: 385 NRNGQLGDGSISN---RSTPVLVKI 406



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 152/318 (47%), Gaps = 23/318 (7%)

Query: 44  ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
            N  AIAG   HS+A+TS G V+++GSN +GQLG GTT+   +P  + +L+ I  I A+ 
Sbjct: 108 NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAI-ASK 166

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G     L SD G V+ +G++ +G+   G    +   +P    SL  I  +  A G + + 
Sbjct: 167 GLHNLALKSD-GTVWTWGRNIYGQLGDGTTTDR--NTPVQTRSLNTIISI--AGGGYHSL 221

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
               +G ++T+      +LG  T  N   P  L+  ++++ +++    +  +L      +
Sbjct: 222 AQKADGTIWTWGLNQYGQLGDGTITNRTIP-VLVNGIKDVSMIRCGGDHSIVLK-----N 275

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              ++  G    G+LG  S  +   P  +    L N+  + +  G  H+ ++  DG V T
Sbjct: 276 NGTIWIWGFNQHGQLGDRSTDNRSTP--VPMGDLKNI--MTIDGGGDHSLILKSDGTVWT 331

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LG G     + P     L++V AI  A+G+  +  +  DG ++++G   +  
Sbjct: 332 WGNNENGQLGDGTTMSRATPIQASTLSNVTAI--ASGEQHSIALKSDGTIWAWGSNRNGQ 389

Query: 343 LGHNAIADGQGNRHANVL 360
           LG  +I+    NR   VL
Sbjct: 390 LGDGSIS----NRSTPVL 403



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 17/264 (6%)

Query: 44  ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +N  AIA  G H++A+ S G V+++G N  GQLG GTT +   P   RSL    II  A 
Sbjct: 158 KNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN--TIISIAG 215

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   ++     G ++ +G + +G+   G    + +  P LV  +K++ +++   G   + 
Sbjct: 216 GGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTI--PVLVNGIKDVSMIRC--GGDHSI 271

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           VL   G ++ + +    +LG  +  N   P P+ G L+NI  +     +  +L      S
Sbjct: 272 VLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPM-GDLKNIMTIDGGGDHSLILK-----S 325

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              V++ G    G+LG G+      P  I+   L N+    +A+G  H+  +  DG +  
Sbjct: 326 DGTVWTWGNNENGQLGDGTTMSRATP--IQASTLSNV--TAIASGEQHSIALKSDGTIWA 381

Query: 283 WGWGRYGCLGHGNEECESVPKVVQ 306
           WG  R G LG G+    S P +V+
Sbjct: 382 WGSNRNGQLGDGSISNRSTPVLVK 405



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 31/270 (11%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++Q + G+F +  L  +G V T+      +LG  T  +   P   +  L N  V  IA G
Sbjct: 60  ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQ-VKDLNN--VTAIAGG 116

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAW 269
             + +AL    +   V++ G    G+LG G+      P      Q+ NL+ +  +A+   
Sbjct: 117 AWHSVALTSDGT---VWTWGSNWAGQLGDGTTKSRNKP-----VQVNNLKNITAIASKGL 168

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H   +  DG V TWG   YG LG G     + P   ++LN +  I +A G Y +     D
Sbjct: 169 HNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTI--ISIAGGGYHSLAQKAD 226

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G ++++G  +   LG   I         N   P LV  +K V+  +++           H
Sbjct: 227 GTIWTWGLNQYGQLGDGTI--------TNRTIPVLVNGIKDVS--MIRCG-------GDH 269

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQT 419
           +  L  +G ++ +G    GQLG    +N++
Sbjct: 270 SIVLKNNGTIWIWGFNQHGQLGDRSTDNRS 299


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 155/339 (45%), Gaps = 35/339 (10%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+P+ S   + +   A G     L++  G+++ +G++S G   +GV   + V  P+LVES
Sbjct: 271 PKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVES 328

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
           L    V   A G F T  ++  G ++T+  G  N   LGH T+ +   P  + G LE + 
Sbjct: 329 LAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL- 387

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
             Q+A+  C     A   +   +++ G G  G LGHG + +  +PR +E   L  L+ + 
Sbjct: 388 --QVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVE--SLSGLRTIA 443

Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           VA G WH A V +            G++ TWG G    LGHG++E    P  V AL +  
Sbjct: 444 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYN 503

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   T  ++  G V + G      LG N  +DG+         P  V   K + 
Sbjct: 504 FQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGK--------LPCFVED-KLLG 553

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           E V +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 554 ECVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 587



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 23/290 (7%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G ++++G  ++++G LGHGT    W P+ I   L+G+++     G   T
Sbjct: 340 GEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 399

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
            L++   Q++ FG  +FG   +G +    V  P+ VESL  +  +  A G + TA +   
Sbjct: 400 ALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGVWHTAAVVEV 457

Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                      G+++T+  G+  RLGH  +   ++P  +   +E     ++A G+   + 
Sbjct: 458 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE-YNFQKVACGHSLTVG 516

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    SG  V ++G  + G+LG+  ++D K P  +E  +LL      +A GA+H AV+  
Sbjct: 517 LTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
              V TWG G  G LGHG+ E    P +V+ L D    ++A G +YT  +
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 621



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 144/329 (43%), Gaps = 26/329 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+  VT +G ++++G  S G+LGHG   +  +PR + SL    +   A G   T  ++ A
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMA 350

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           G+++ +G  +      G  GT +      ++   L+ + V     G + TA+++   +++
Sbjct: 351 GELFTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTTTRQLF 409

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--------ACQPSG 223
           TF  G    LGH  + N   P   + +L  +  + +A G  +  A+        +   S 
Sbjct: 410 TFGDGTFGVLGHGDKDNVAYPRE-VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 468

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVC 281
             +++ G G   +LGHG +     P  +      N Q V       H+  VG    G+VC
Sbjct: 469 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACG----HSLTVGLTTSGQVC 524

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           T G   YG LG+   + +    V   L       +A G Y   V++   +VY++G G + 
Sbjct: 525 TMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANG 584

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
            LGH  I D +        TP LV +LK 
Sbjct: 585 RLGHGDIEDRK--------TPTLVETLKD 605


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 155/301 (51%), Gaps = 17/301 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG         P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + G+   K ++ +P+ + +L  I ++Q + G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQP 221
           ++ +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 222 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           S    +  G    G+L   G     +  + +    L NL  V ++ GA H AV+ QDG+V
Sbjct: 202 S----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 339
            T+G  R G LG+     +  P++V+ ++ + +  V  G Y T   V   G V SFG G 
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVHTTGQVVSFGHGP 316

Query: 340 S 340
           S
Sbjct: 317 S 317



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R     +    E  P         ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGADSR---ELQRRRTEGSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + LN+   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRGAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LN +K I V+ G Y +  +S+D  V+S+G      L       G
Sbjct: 109 IGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G    +  +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNPERV 427
           +   N   +   P  V
Sbjct: 215 LSGRNVPVQSNKPLSV 230



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G    
Sbjct: 6   GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ G   T V+++DG V++FG   S  LG++   + +G        PQLV   + ++
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---EIID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V Q+        + HT A    +G++ +FG G
Sbjct: 287 GLVSQVDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 27/283 (9%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG    P    P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAPRGELPEPI-QALETLNVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGELKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  V +LK +   VV IS       
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGAE--- 246

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
             HT  LT+ GK++ FG    GQLG    +   E+  P+ V+I
Sbjct: 247 --HTAVLTQDGKVFTFGDNRSGQLG---YSPTPEKRGPQLVEI 284



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           GA  T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVEIIDGL-VSQVDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYVHTTGQVVSFGHG 315


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 155/301 (51%), Gaps = 17/301 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG         P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++ +   G+V+A+G  S  E + G+   K ++ +P+ + +L  I ++Q + G++ +  LS
Sbjct: 87  SLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALS 144

Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQP 221
           ++ +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 222 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
           S    +  G    G+L   G     +  + +    L NL  V ++ GA H AV+ QDG+V
Sbjct: 202 S----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 339
            T+G  R G LG+     +  P++V+ ++ + +  V  G Y T   V   G V SFG G 
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVHTTGQVVSFGHGP 316

Query: 340 S 340
           S
Sbjct: 317 S 317



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R     +    E  P         ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGADSR---ELQRRRTEGSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + LN+   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRGAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LN +K I V+ G Y +  +S+D  V+S+G      L       G
Sbjct: 109 IGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G    +  +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNPERV 427
           +   N   +   P  V
Sbjct: 215 LSGRNVPVQSNKPLSV 230



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G    
Sbjct: 6   GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ G   T V+++DG V++FG   S  LG++   + +G        PQLV   + ++
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---EIID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V Q+        + HT A    +G++ +FG G
Sbjct: 287 GLVSQVDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 27/283 (9%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG    P    P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAPRGELPEPI-QALETLNVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGELKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  V +LK +   VV IS       
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGAE--- 246

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
             HT  LT+ GK++ FG    GQLG    +   E+  P+ V+I
Sbjct: 247 --HTAVLTQDGKVFTFGDNRSGQLG---YSPTPEKRGPQLVEI 284



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           GA  T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVEIIDGL-VSQVDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYVHTTGQVVSFGHG 315


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 20/316 (6%)

Query: 42  RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           RR  ++A+     G  H++ + + G VYS G+N  GQLG   +  +       S   IR 
Sbjct: 80  RRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRA 139

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +  A G   ++ +SDAGQV+++G +  G+   G +    +  P++++ L  + +VQ A G
Sbjct: 140 V--ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLHIVQIACG 196

Query: 158 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
                 L+  G +  FSWG +A     LG  +  N+  P   +  L  +P+  +A G  +
Sbjct: 197 AVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPR-RVSHLVGVPLALVACGAMH 253

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            + L   PSG  V+  G    G+LG   + D  HP +++  +   ++   V  G  H A 
Sbjct: 254 SVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCCGENHTAA 308

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 332
           +  DG V T+G G YG LGHG +  E+VP+ V  L       ++ G  +T     + G +
Sbjct: 309 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRL 368

Query: 333 YSFGCGESASLGHNAI 348
           Y FG G S  LG+  +
Sbjct: 369 YIFGLGMSGQLGNGTL 384



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 159/359 (44%), Gaps = 34/359 (9%)

Query: 63  VVYSFGSNSSGQLGH-------GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           ++YS+G   +G+LG         T     +P  +R      + + A G   T+++   G 
Sbjct: 46  LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 105

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VY+ G + FG+        KL    + V +L    +   A G   +  LS  G+V+++  
Sbjct: 106 VYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 161

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             + +LG  TE        ++  L  + +VQIA G  + LALA   +   ++S G    G
Sbjct: 162 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA---NNGELFSWGGNASG 218

Query: 236 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG G  S  +E+ PR +    L+ +   +VA GA H+  +   G V  WG    G LG 
Sbjct: 219 QLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL 276

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            ++     P V++ L   +  HV  G+  T  ++ DG V++FG G    LGH        
Sbjct: 277 SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGV------ 330

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
               N   P+ V  L  +   + Q+S         HT A   +SG+LY FG G  GQLG
Sbjct: 331 --KVNEAVPRRVVEL--MGTAISQLSCG-----RCHTVAYAPQSGRLYIFGLGMSGQLG 380



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++  G V+S+G N +GQLG GT EE   RP+ I+ L  + I+Q A GA   + 
Sbjct: 143 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 202

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +++ G+++++G ++ G+   G   T     P+ V  L  + +   A G   +  L+  G 
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 262

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG ++  +LG   + + + P  +L  L +  +  +  G  +  AL    +   V+
Sbjct: 263 V--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALT---ADGGVF 316

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGHG + +E  PR +   +L+      ++ G  H  A   Q GR+  +G G
Sbjct: 317 TFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLG 374

Query: 287 RYGCLGHGNEECESVPKVVQAL 308
             G LG+G  E  ++P  V  L
Sbjct: 375 MSGQLGNGTLESSALPVTVPGL 396



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 104
           Q   G  H +A+ + G ++S+G N+SGQLG G  +T  E  PR +  L G+ +   A GA
Sbjct: 192 QIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGA 251

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             ++ ++ +G V+ +G++S G+     Q  +L   P +++ L++  +     G   TA L
Sbjct: 252 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL--HPTVLKPLRSQRIKHVCCGENHTAAL 309

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G V+TF  G   +LGH  + N+  P  ++  L    + Q++ G C+ +A A  P   
Sbjct: 310 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYA--PQSG 366

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
            +Y  G G+ G+LG+G+      P              V   G WH
Sbjct: 367 RLYIFGLGMSGQLGNGTLESSALP--------------VTVPGLWH 398



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 224 MAVYSVGCGLGGKLGH-------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           M +YS G G  G+LG         + T    P  + +F    ++ V  A G  H  V+  
Sbjct: 45  MLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREV--ACGHKHTLVLLA 102

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           +G V + G   +G LG       S+ K+  V AL+  +   VA G+  +  +S+ G V+S
Sbjct: 103 NGSVYSCGANDFGQLGQD----RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFS 158

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +GC  +  LG        G    + L P+++  L  ++  +VQI+         H  AL 
Sbjct: 159 WGCNRNGQLG-------CGTEEESRLRPKVIKKLATLH--IVQIACGA-----VHCLALA 204

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +G+L+++G    GQLG+   +   ER  P RV
Sbjct: 205 NNGELFSWGGNASGQLGLGRDSTGNERL-PRRV 236


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 20/316 (6%)

Query: 42  RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           RR  ++A+     G  H++ + + G VYS G+N  GQLG   +  +       S   IR 
Sbjct: 86  RRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRA 145

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +  A G   ++ +SDAGQV+++G +  G+   G +    +  P++++ L  + +VQ A G
Sbjct: 146 V--ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLHIVQIACG 202

Query: 158 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
                 L+  G +  FSWG +A     LG  +  N+  P   +  L  +P+  +A G  +
Sbjct: 203 AVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPR-RVSHLVGVPLALVACGAMH 259

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            + L   PSG  V+  G    G+LG   + D  HP +++  +   ++   V  G  H A 
Sbjct: 260 SVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCCGENHTAA 314

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 332
           +  DG V T+G G YG LGHG +  E+VP+ V  L       ++ G  +T     + G +
Sbjct: 315 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRL 374

Query: 333 YSFGCGESASLGHNAI 348
           Y FG G S  LG+  +
Sbjct: 375 YIFGLGMSGQLGNGTL 390



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 159/359 (44%), Gaps = 34/359 (9%)

Query: 63  VVYSFGSNSSGQLGH-------GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           ++YS+G   +G+LG         T     +P  +R      + + A G   T+++   G 
Sbjct: 52  LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 111

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VY+ G + FG+        KL    + V +L    +   A G   +  LS  G+V+++  
Sbjct: 112 VYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 167

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             + +LG  TE        ++  L  + +VQIA G  + LALA   +   ++S G    G
Sbjct: 168 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA---NNGELFSWGGNASG 224

Query: 236 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           +LG G  S  +E+ PR +    L+ +   +VA GA H+  +   G V  WG    G LG 
Sbjct: 225 QLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL 282

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            ++     P V++ L   +  HV  G+  T  ++ DG V++FG G    LGH        
Sbjct: 283 SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGV------ 336

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
               N   P+ V  L  +   + Q+S         HT A   +SG+LY FG G  GQLG
Sbjct: 337 --KVNEAVPRRVVEL--MGTAISQLSCG-----RCHTVAYAPQSGRLYIFGLGMSGQLG 386



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+A++  G V+S+G N +GQLG GT EE   RP+ I+ L  + I+Q A GA   + 
Sbjct: 149 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 208

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +++ G+++++G ++ G+   G   T     P+ V  L  + +   A G   +  L+  G 
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 268

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V  F WG ++  +LG   + + + P  +L  L +  +  +  G  +  AL    +   V+
Sbjct: 269 V--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALT---ADGGVF 322

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGHG + +E  PR +   +L+      ++ G  H  A   Q GR+  +G G
Sbjct: 323 TFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLG 380

Query: 287 RYGCLGHGNEECESVPKVVQAL 308
             G LG+G  E  ++P  V  L
Sbjct: 381 MSGQLGNGTLESSALPVTVPGL 402



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 104
           Q   G  H +A+ + G ++S+G N+SGQLG G  +T  E  PR +  L G+ +   A GA
Sbjct: 198 QIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGA 257

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             ++ ++ +G V+ +G++S G+     Q  +L   P +++ L++  +     G   TA L
Sbjct: 258 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL--HPTVLKPLRSQRIKHVCCGENHTAAL 315

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +G V+TF  G   +LGH  + N+  P  ++  L    + Q++ G C+ +A A  P   
Sbjct: 316 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYA--PQSG 372

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
            +Y  G G+ G+LG+G+      P              V   G WH
Sbjct: 373 RLYIFGLGMSGQLGNGTLESSALP--------------VTVPGLWH 404



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 224 MAVYSVGCGLGGKLGH-------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           M +YS G G  G+LG         + T    P  + +F    ++ V  A G  H  V+  
Sbjct: 51  MLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREV--ACGHKHTLVLLA 108

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           +G V + G   +G LG       S+ K+  V AL+  +   VA G+  +  +S+ G V+S
Sbjct: 109 NGSVYSCGANDFGQLGQD----RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFS 164

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +GC  +  LG        G    + L P+++  L  ++  +VQI+         H  AL 
Sbjct: 165 WGCNRNGQLG-------CGTEEESRLRPKVIKKLATLH--IVQIACGA-----VHCLALA 210

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +G+L+++G    GQLG+   +   ER  P RV
Sbjct: 211 NNGELFSWGGNASGQLGLGRDSTGNERL-PRRV 242


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 150/306 (49%), Gaps = 19/306 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H++ +T+ G VY+ GSN   QLGH  + +  RP  I  L    I Q A G+ 
Sbjct: 39  NQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK--RPLQIPELVDCVITQIACGSR 96

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +++ GQV ++G +  G+  +      +V  P+ V +L +  VVQ A GN  +  L+
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHA-SDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT 155

Query: 166 REGRVYTFSWGND--ARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALAC 219
             G +Y  +WG++   +LG  T  E        LL TL  IPV  IA G  + +L++   
Sbjct: 156 CCGELY--AWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLIS--- 210

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
                AV+  G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G 
Sbjct: 211 --KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 266

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
           V T G G YG LGHG    E +P++V  L       VA G+ +T  +V   G +Y FG G
Sbjct: 267 VFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLG 326

Query: 339 ESASLG 344
            S  LG
Sbjct: 327 SSGQLG 332



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 172/358 (48%), Gaps = 38/358 (10%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +G+ S GQLG G  E+E    P  +       + Q A G   T+ ++ +G+VYA G 
Sbjct: 3   LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGS 62

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
           + + +  + +   + +  P+LV+ +    + Q A G+  +  L+  G+V   SWG++   
Sbjct: 63  NDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQV--LSWGDNECG 116

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH ++ + V+    +  L +  VVQIA G  + LAL C      +Y+ G  + G+LG 
Sbjct: 117 QLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTC---CGELYAWGSNIYGQLGV 173

Query: 240 GSRTDE---KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHG 294
            + ++      P L+    LL +    +A G  H+ ++ +   V  +GWGR  C  LG  
Sbjct: 174 KTPSELGQCNAPMLLTT--LLGIPVRAIACGGNHSFLISKSSAV--FGWGRNNCGQLGLN 229

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           +E   + P  ++ L  +    VA GD  +  ++ +G V++ G G    LGH         
Sbjct: 230 DETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFC------ 283

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 411
              N + P++V  L  +   + Q++  N      HT A+  + G++Y FG G  GQLG
Sbjct: 284 --GNEMLPRMVMEL--MGSTISQVACGNR-----HTLAMVPARGRIYGFGLGSSGQLG 332



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 13/265 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
           +Q   G  HS+A+T  G V S+G N  GQLGH + ++  + P+ +R+L    ++Q A G 
Sbjct: 89  TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGN 148

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFT 161
             ++ ++  G++YA+G + +G+   GV+    +    +P L+ +L  I V   A G   +
Sbjct: 149 NHSLALTCCGELYAWGSNIYGQL--GVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHS 206

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
            ++S+   V+ +   N  +LG + E N   P   L TL  + V  +A G  + + L  + 
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG 265

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
               V++ G G  G+LGHG   +E  PR++   +L+      VA G  H  A+V   GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFCGNEMLPRMV--MELMGSTISQVACGNRHTLAMVPARGRI 320

Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
             +G G  G LG  N +  ++P++V
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQMV 345



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGR 279
           M +Y  G    G+LG G   DE+    I     +  QP      +A G  H   +   G+
Sbjct: 1   MELYCWGNASHGQLGLGGIEDEQ----ILTPSKMPWQPDSAVNQIACGHRHTLFLTASGK 56

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V   G   Y  LGH  E     P  +  L D     +A G   +  ++E G V S+G  E
Sbjct: 57  VYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNE 114

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LGH +  D        V  P+ V +L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 115 CGQLGHASDQDV-------VQLPKTVRAL--VSKTVVQIACGNN-----HSLALTCCGEL 160

Query: 400 YAFGAGDKGQLGIE 413
           YA+G+   GQLG++
Sbjct: 161 YAWGSNIYGQLGVK 174



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 4/153 (2%)

Query: 47  QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +AIA G  HS  ++    V+ +G N+ GQLG         P  +++L+ + +   A G  
Sbjct: 197 RAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDE 256

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            ++ +++ G V+  G  ++G+  +G  G +++  P++V  L    + Q A GN  T A++
Sbjct: 257 FSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML--PRMVMELMGSTISQVACGNRHTLAMV 314

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              GR+Y F  G+  +LG     +   P  ++G
Sbjct: 315 PARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIG 347


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 161/353 (45%), Gaps = 26/353 (7%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
           +  + KP+ +A    LK    G W +         + C  E  Q I       +     +
Sbjct: 14  REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
             T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGE 124

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+ +G +++ +   G     LV   Q+  +L N  V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            N  ++G  +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNG 240

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG GS  ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN
Sbjct: 241 QLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
           +  +S P  V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 244 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 288

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 7/296 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  H++ + +   V+S G NS GQLG         P P+++L+ ++    + G   
Sbjct: 27  QAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           + +V  FSWG ++  +LG   E +       + +LE IPV Q+AAG  +  AL+   +  
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSF 203

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
              S   G     G   +     P  I   +  NL  + ++ G  H AV+ QDG+V T+G
Sbjct: 204 GWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFTFG 261

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
               G LG+     +  P++V+ ++ + +     GD+T   V   G V SFG G S
Sbjct: 262 DNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGHGPS 317



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G + +    SPQ V SL+ I V Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKELSS-QASPQRVRSLEGIPVAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +F WG++     A  G + +    +P  + G L+N+ V+ I+ G  +   L+      
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V++ G    G+LG+     ++ P+++E+   L  Q  +   G    A V   G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313

Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
            G        + E       +  ++ A  L DV+  H+  G Y  FV +
Sbjct: 314 HGPSDTSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 32/319 (10%)

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G  ++QAA+G    +L+     V++ G++S G+   G +G      P+ V++LK +    
Sbjct: 22  GAELLQAASGERHALLLLTNSSVHSCGENSRGQ--LGRRGAPRGDLPEPVQALKTLKFNL 79

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
            + G   +  +  +GRV+ +  G++ +LG   E  ++   P  + TL  I ++Q++ G+ 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEINFTPKKITTLTGIKIIQVSCGHY 138

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVV-VAAGAWH 270
           + LAL+       V+S G    G+LG G   + +  P+ +   + +   PV  VAAG  H
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI---PVAQVAAGGAH 192

Query: 271 AAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           +  +   G    WG    G L   G   +   + P  + AL ++  I+++ GD  T V+S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           +DG V++FG   S  LG+N     +G        PQ+V   ++++  V QI         
Sbjct: 253 QDGKVFTFGDNSSGQLGYNPTPKKRG--------PQIV---ERIDGLVSQIDCGGD---- 297

Query: 388 AHTFALTE-SGKLYAFGAG 405
            HT A    +G++ +FG G
Sbjct: 298 -HTIAYVHTTGQVVSFGHG 315



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 26/283 (9%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G     +L     V++    +  +LG    P    P P+   L+ +    ++ G
Sbjct: 25  LLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPV-QALKTLKFNLVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEINFTPKKITT--LTGIKIIQVSCGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +S 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +      
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVQVQSN--KPLSIGALKNLG--VIYISCGDE----- 246

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP---ERVD 428
           HT  L++ GK++ FG    GQLG    N   ++  P   ER+D
Sbjct: 247 HTAVLSQDGKVFTFGDNSSGQLG---YNPTPKKRGPQIVERID 286



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T ++S  G+V+ FG +S G+  Y     K    PQ+VE +  +       G+   A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKK--RGPQIVERIDGLVSQIDCGGDHTIA 301

Query: 163 VLSREGRVYTFSWG-NDARLGHHTE 186
            +   G+V +F  G +D     H E
Sbjct: 302 YVHTTGQVVSFGHGPSDTSKPTHPE 326


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L +I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P  +  +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG    +     P  ++
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL +I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R        +++     G+     ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + L +   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LND+K I V+ G Y +  +S+D  V+S+G      L       G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G    +  +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNPERV 427
           +   N   +   P  V
Sbjct: 215 LSGRNVPVQSNKPLSV 230



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 20/280 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G   + +L    RV +    +  +LG         P P+   LE + V  ++ G
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQ-ALETLIVDLVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G G  G+LG G   +    P+ I    L +++ + V+ G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +S 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G  + +G   S S G  A++       +N   P  V +LK  N  VV IS  +     A
Sbjct: 199 CGTSFGWG---SNSAGQLALSGRNVPVQSN--KPLSVGALK--NLGVVYISCGD-----A 246

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           HT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYVHTTGQVVSFGHG 315


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 155/334 (46%), Gaps = 44/334 (13%)

Query: 45  NSQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           NS+ ++  G  +AV +  G +Y +G+NS GQLG G   +   PR +++L G  +   A  
Sbjct: 14  NSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACS 73

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------------------------VT 138
              T+   D G  YA+G    G    G+ G  +                         V 
Sbjct: 74  QEHTVCCLDDGSAYAWGCALNG--RLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVC 131

Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVL----SREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
           +P+++ESL   F+   A G + +A L         ++T   G + RLGH  E +   P  
Sbjct: 132 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPT- 190

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQ 253
            +  LEN+ +  IA G  +    AC  S   +Y+ G    GKLG GS R  +  P+ +  
Sbjct: 191 AVHALENVNITAIACGAHH---TACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSG 247

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALNDV 311
             L N   V VA G+ H+A V  DG + TWG GR   LGH    E  E +P+ V+AL  +
Sbjct: 248 -PLRNKAVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEILPRRVEALLGL 304

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             IHV  GD  T  + E+G+V+++G   S  LGH
Sbjct: 305 FVIHVVCGDAHTACIVENGNVWAWGT--SRILGH 336



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 48/346 (13%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR + +L+ I   + +AG  +  +++ +G++Y +G +S  E + G    +  + P+LV++
Sbjct: 4   PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANS--EGQLGTGDRRDASVPRLVKA 61

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-------------TEPNDVEP 192
           L    V   A     T     +G  Y +    + RLG H             +      P
Sbjct: 62  LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARP 121

Query: 193 HPLLGTLE--NIPVVQIAAGYCYLLALACQP-----------SGMAVYSVGCGLGGKLGH 239
            PL          V++   GY ++  +AC P              ++++ G GL G+LGH
Sbjct: 122 EPLASACAVCTPRVLESLCGY-FIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGH 180

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-C 298
           G   D   P  +   + +N+    +A GA H A V   G + TWG   +G LG G+    
Sbjct: 181 GDEEDRHLPTAVHALENVNI--TAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGS 238

Query: 299 ESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 357
           + +PK V   L +   + VA G   +  V+ DG++Y++G G    LGH      QG   +
Sbjct: 239 QLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEV----QG--ES 290

Query: 358 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           + + P+ V       E ++ + + + +  +AHT  + E+G ++A+G
Sbjct: 291 DEILPRRV-------EALLGLFVIHVVCGDAHTACIVENGNVWAWG 329



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 51/324 (15%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
           + SP+LV++LKNI   + + G    AV++  G +Y +   ++ +LG     +   P  L+
Sbjct: 1   MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPR-LV 59

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------ 238
             L    V  +A   C      C     + Y+ GC L G+LG                  
Sbjct: 60  KALHGKVVKAVA---CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 116

Query: 239 HGSRTDEKH-------PRLIEQFQLLNLQPVVVAAGAWHAAVVG---QD-GRVCTWGWGR 287
            G+R +          PR++E   L       VA G +H+A +G   QD   + T G G 
Sbjct: 117 TGARPEPLASACAVCTPRVLES--LCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL 174

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LGHG+EE   +P  V AL +V    +A G + T  V+  G +Y++G      L    
Sbjct: 175 NGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKL---- 230

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
              G G+   + L P+ V+   + N+ VV ++L +      H+  +T  G+LY +G G +
Sbjct: 231 ---GLGSTRGSQLLPKHVSGPLR-NKAVVSVALGSQ-----HSACVTTDGELYTWGQGRR 281

Query: 408 GQLGIELVNNQTERGNPERVDIDL 431
             LG E V  +++   P RV+  L
Sbjct: 282 --LGHE-VQGESDEILPRRVEALL 302



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 18/195 (9%)

Query: 7   IFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHS----IAVTSKG 62
           +F P T A  + L   C      VL      E+ C    +    GP HS    I    + 
Sbjct: 112 VFSPATGARPEPLASACAVCTPRVL------ESLCGYFIADVACGPYHSAFLGIYEQDRT 165

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
            +++ G   +G+LGHG  E+   P  + +L+ + I   A GA  T  ++ AG +Y +G  
Sbjct: 166 SLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGA 225

Query: 123 SFGEAEYG-VQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           +FG+   G  +G++L+  P+ V   L+N  VV  A+G+  +A ++ +G +YT  WG   R
Sbjct: 226 AFGKLGLGSTRGSQLL--PKHVSGPLRNKAVVSVALGSQHSACVTTDGELYT--WGQGRR 281

Query: 181 LGHHT--EPNDVEPH 193
           LGH    E +++ P 
Sbjct: 282 LGHEVQGESDEILPR 296


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L +I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P  +  +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 21/297 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L  I+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ VV I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313

Query: 285 WGRYGCLGHGNEECES----VPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSF 335
            G        + E  +    +  ++ A +  DV+  H+  G Y  FV +    +  F
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQVSIILF 370



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG    +     P  ++
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL +I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R        +++     G+     ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + L +   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LND+K I V+ G Y +  +S+D  V+S+G      L       G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G    +  +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNPERV 427
           +   N   +   P  V
Sbjct: 215 LSGRNVPVQSNKPLSV 230



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 20/280 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           ++QAA G   + +L    RV +    +  +LG         P P+   LE + V  ++ G
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQ-ALETLIVDLVSCG 83

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 269
             + LA+ C      V++ G G  G+LG G   +    P+ I    L +++ + V+ G +
Sbjct: 84  KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHY 138

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +S 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G   SFG G S S G  A++       +N   P  V +LK  N  VV IS  +     A
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALK--NLGVVYISCGD-----A 246

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           HT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYVHTTGQVVSFGHG 315


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 16/315 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 84  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHN 143

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 144 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 202

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 203 SGSTANQPIPRRVTGCLQNKTVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSG 259

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 260 GNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 317

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S +L H        +  
Sbjct: 318 TPVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVF 374

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 375 ACFATPAVTWRLLSV 389



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 168 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNI 227

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   
Sbjct: 228 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ--PTPCRIAALQGIRVQRVACGYAH 285

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 286 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVI--VEKDRIIEIAA 332



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 137 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 195

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 255

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                 G G    N  TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 256 L-----GSG---GNQPTPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 300

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 301 NSYGQLGTGNKSNQS 315



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G VY +G N +GQLG G+   +  P  I +LQGIR+ + A G   T++++D G
Sbjct: 234 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 293

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVYA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY   
Sbjct: 294 QVYAWGANSYGQLGTGNKSNQSYPTPVIVEK-DRIIEIAACHSAHTSAAKTQGGHVYM-- 350

Query: 175 WG 176
           WG
Sbjct: 351 WG 352


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  108 bits (269), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 31/289 (10%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHP 194
           P +V+   +I +++ + GN FT  LS+EG VY++  GN   LG   +     PN ++   
Sbjct: 243 PSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQK 302

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--- 251
                +NI    IA G  ++L+L  Q  G+ VYS G G GG+LGHG  T E  P+ I   
Sbjct: 303 NGHLFQNIK--DIACGSNHVLSLDHQ--GI-VYSWGNGQGGRLGHGDETGENIPKEIIGL 357

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
            Q+++L     ++ AG   +A +     +  WG G +G LG G       P +++ L D 
Sbjct: 358 RQYKIL-----MIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQ 412

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
           K   +A G   +  +  +G    +G  +   LG     D       N   P+ + +L + 
Sbjct: 413 KVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALD------RNFTQPKELVTLDK- 465

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            E++ QI+         H+ ALTE+G++Y+FG    G+LG + +    +
Sbjct: 466 -EKLYQIAAG-----PFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQ 508



 Score =  104 bits (260), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 95/398 (23%), Positives = 177/398 (44%), Gaps = 64/398 (16%)

Query: 62  GVVYSFGSNSSGQLGHGTTEEE-------------WRPRPIRSLQGIRIIQAAAGAGRTM 108
           G+V+++G  + G+LG    E+E             ++P  ++    I II+ + G   T+
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ----AAIGNFFTAVL 164
            +S  G VY++G  + G    G Q   +  +P +++  KN  + Q     A G+     L
Sbjct: 266 ALSQEGHVYSWGLGNSGGLGQGEQNVSM--TPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +G VY++  G   RLGH  E  +  P  ++G L    ++ I AG     A++ +    
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKNE-- 380

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            ++  G GL G+LG G   +   P ++E  +   ++   +A G+ H+  + ++G+   WG
Sbjct: 381 -LFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVED--IALGSNHSLCILRNGKAMCWG 437

Query: 285 WGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
             + G LG     +   + PK +  L+  K   +A G + +  ++E+G++YSFG  +   
Sbjct: 438 SSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGK 497

Query: 343 LGHNAIADGQGNRHANVLTPQLVTS-------------------LKQVNERVVQIS---- 379
           LG++ I         NV  P+ +T+                     Q ++++  IS    
Sbjct: 498 LGYDEI-------KGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQ 550

Query: 380 ------LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 +     +N+  F L + G++Y  G+   GQLG
Sbjct: 551 LGGCEVIQAQCGFNSTVFLLND-GQMYVCGSNKYGQLG 587



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 42/285 (14%)

Query: 166 REGRVYTFSWG--NDARLG--------HHTEPNDVEPHPLLGTL----ENIPVVQIAAGY 211
           R G    F+WG  N+ RLG         + E  + E  P   ++     +I +++++ G 
Sbjct: 202 RCGNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGN 261

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ------FQLLNLQPVVVA 265
            + LAL+ +     VYS G G  G LG G +     P +I+       FQ  N++ +  A
Sbjct: 262 SFTLALSQEGH---VYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQ--NIKDI--A 314

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
            G+ H   +   G V +WG G+ G LGHG+E  E++PK +  L   K + +  G+ ++  
Sbjct: 315 CGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAA 374

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           +S   +++ +G G    LG          + ANVL P ++  LK  +++V  I+L ++  
Sbjct: 375 ISIKNELFIWGVGLHGRLG--------TGKTANVLKPVMLEDLK--DQKVEDIALGSN-- 422

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
              H+  +  +GK   +G+   G+LG+E   ++      E V +D
Sbjct: 423 ---HSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLD 464



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 105/427 (24%), Positives = 173/427 (40%), Gaps = 83/427 (19%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +N + IA G  H +++  +G+VYS+G+   G+LGHG    E  P+ I  L+  +I+   A
Sbjct: 308 QNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEA 367

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G G +  IS   +++ +G    G    G   T  V  P ++E LK+  V   A+G+  + 
Sbjct: 368 GEGSSAAISIKNELFIWGVGLHG--RLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSL 425

Query: 163 VLSREGRVYTFSWGNDARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            + R G+   +    D +LG  T  + N  +P  L+ TL+   + QIAAG  + +AL   
Sbjct: 426 CILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELV-TLDKEKLYQIAAGPFHSIALT-- 482

Query: 221 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
                +YS G    GKLG+   + + + PR I    +              A   G + R
Sbjct: 483 -ENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIF-------------ARKTGLNDR 528

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
                  +Y      +++  +V    Q L   + I    G  +T  +  DG +Y  G  +
Sbjct: 529 R-----DKYQLFNQFDDQM-TVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNK 582

Query: 340 SASLGHNAIADGQ---GNR-------------------------------------HANV 359
              LG +  A G+   GN+                                       +V
Sbjct: 583 YGQLGFSKRAGGKDKDGNKMLINSNNDGNQGGMSGANDNDNDDDDNGIGGGFLQQNSDDV 642

Query: 360 LTPQLVTSLKQVNE-RVVQISLTNSIYWNA-------------HTFALTESGKLYAFGAG 405
           L PQL   L ++ + + V+     +IY +A             H  A+T  G  + +G  
Sbjct: 643 LPPQLKKKLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRN 702

Query: 406 DKGQLGI 412
           D GQLG+
Sbjct: 703 DNGQLGM 709



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 154/361 (42%), Gaps = 51/361 (14%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
            H +AVT +G  + +G N +GQLG G  +    +P  I+SLQ   II  A+G   ++ +SD
Sbjct: 686  HVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSD 745

Query: 113  AGQVYAFGKDSFGEAEYGVQG-------------------------TKLVTSPQLVESLK 147
             G+V   G + FGE   G+                           TK+  +P++++ L+
Sbjct: 746  LGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGLE 805

Query: 148  NIFVVQAAIGNFFTAVLS---REGRVYTFSWGN--DARLGHHTEPNDVEPHPL-LGTLEN 201
            +I  + AA  N   A+ +   +E  +  F+WG     + GH +  ND  P  + +  L++
Sbjct: 806  SIGFI-AAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKD 864

Query: 202  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNL 259
               +Q + G  + +AL    +G   +    G    +G     DEK   P  +E    +  
Sbjct: 865  TKFIQASCGSKHTIAL--DTTGHIWF---FGYKPSVGIEDFNDEKQFMPARLETPSKIQE 919

Query: 260  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV----QALNDVKAIH 315
                +++G  H   V Q G V  +G+G+     + N +  S  K      Q  N+ KA+ 
Sbjct: 920  PFKFISSGEEHNLAVTQSGLV--YGFGK-----NTNTKINSSHKEYLYFDQVENEEKAVL 972

Query: 316  VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
             A G   + ++   G  Y++G   +   G     D       ++  P ++  +K + ++ 
Sbjct: 973  TACGANHSVLIDTKGVPYTWGFVGNGRCGLKLEKDDAQQEQESLSAPTVIYFMKTLFQKE 1032

Query: 376  V 376
            +
Sbjct: 1033 I 1033



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 115/494 (23%), Positives = 180/494 (36%), Gaps = 156/494 (31%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPI---------------- 89
           Q  AGP HSIA+T  G +YSFG++  G+LG+   +   + PR I                
Sbjct: 470 QIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRR 529

Query: 90  -------------------RSLQGIRIIQAAAGAGRTMLISDAGQVY------------- 117
                              + L G  +IQA  G   T+ + + GQ+Y             
Sbjct: 530 DKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLGFS 589

Query: 118 --AFGKDSFGEA----------EYGVQGTKL---------------------VTSPQLVE 144
             A GKD  G            + G+ G                        V  PQL +
Sbjct: 590 KRAGGKDKDGNKMLINSNNDGNQGGMSGANDNDNDDDDNGIGGGFLQQNSDDVLPPQLKK 649

Query: 145 SLKNIFVVQ---------------------AAIGNFFTAVLSREGRVYTFSWG--NDARL 181
            L  +  +Q                      + G F    ++ EG   TF WG  ++ +L
Sbjct: 650 KLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGA--TFGWGRNDNGQL 707

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------CQPSGMAVY-SVGCGLG 234
           G   +   V     + +L++  ++  A+G  + L L+      C  SG   +  +G GL 
Sbjct: 708 GMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLC--SGFNEFGELGIGLN 765

Query: 235 GKLGHGSRT-------DEKHPR-LIEQFQLLNLQPVVV---------AAGAWHAAVVGQD 277
              G   +        DE + R LIE    + L P ++         AAG  H+  +   
Sbjct: 766 STSGGADKKENPDEIYDENYQRQLIET--KIELTPKIIKGLESIGFIAAGKNHSIAIRTY 823

Query: 278 GR------VCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSED 329
            R      + TWG G +G  GHG+ + + +P++V+   L D K I  + G   T  +   
Sbjct: 824 KRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTT 883

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G ++ FG     S+G     D +    A + TP       ++ E    IS         H
Sbjct: 884 GHIWFFG--YKPSVGIEDFNDEKQFMPARLETPS------KIQEPFKFISSGEE-----H 930

Query: 390 TFALTESGKLYAFG 403
             A+T+SG +Y FG
Sbjct: 931 NLAVTQSGLVYGFG 944


>gi|357436203|ref|XP_003588377.1| Regulator of chromosome condensation family protein [Medicago
           truncatula]
 gi|355477425|gb|AES58628.1| Regulator of chromosome condensation family protein [Medicago
           truncatula]
          Length = 433

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 182/390 (46%), Gaps = 45/390 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRT 107
           AG  H++ +   G VYS+G  + G+LG G+ +++  P  ++  S + IRI+  AAGA  +
Sbjct: 19  AGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIVGIAAGAYHS 78

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL------------VESLKNIFVVQAA 155
           + ++D G V+ +G + +G   Y V    L    +L            VE    + ++   
Sbjct: 79  LALADDGSVWCWGYNLYG--YYSVVPCLLNKFLELHPPDSSTLLLEEVEGKAQLKIISIK 136

Query: 156 IGNFFTAVLSREGRVYTFSWGN---DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
            G   +  +   G ++   WGN    ++ G  +  ++  P P+        VV++A G  
Sbjct: 137 AGGMMSLSIDNLGALWM--WGNCPHQSKEGIFSIVSNFTPTPVW-DFHGHTVVKVACGNE 193

Query: 213 YLLALAC-------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-QLLNLQPVVV 264
           +++AL         +   +  YS G    G+LG G   D  +P +++ F Q  +     +
Sbjct: 194 HIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDSHWSIYEI 253

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 323
           A GA+H A V       T+G G  G LGHG  +  S+P++VQ L   V  + V  G + T
Sbjct: 254 ACGAFHTAFV-----CWTFGLGENGQLGHGTTQSTSIPELVQELPQFVNLVSVDCGLFHT 308

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTN 382
            VVS DGDV+S+G      LG    A   G   ++ L+P +V++  +      VQ++   
Sbjct: 309 CVVSSDGDVWSWGM--EKGLGLYPDARVVGEYSSDALSPLVVSNPYEAKFLEPVQVACG- 365

Query: 383 SIYWNAHTFALTESG-KLYAFGAGDKGQLG 411
                AHT  + + G K+++ G G  G LG
Sbjct: 366 ----AAHTIIVAQEGYKVWSLGRGRSGVLG 391



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVV-YSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--- 93
           +  C  E+  A+   G S    +  ++ YS+G+N+ GQLG G TE+   P  +++     
Sbjct: 187 KVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDS 246

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VV 152
              I + A GA  T  +      + FG    G+  +G   T+  + P+LV+ L     +V
Sbjct: 247 HWSIYEIACGAFHTAFV-----CWTFGLGENGQLGHGT--TQSTSIPELVQELPQFVNLV 299

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH------PLLGT----LENI 202
               G F T V+S +G V+  SWG +  LG + +   V  +      PL+ +     + +
Sbjct: 300 SVDCGLFHTCVVSSDGDVW--SWGMEKGLGLYPDARVVGEYSSDALSPLVVSNPYEAKFL 357

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------EKHPRLIEQFQL 256
             VQ+A G  + + +A +  G  V+S+G G  G LG+G+  D         P L+E F  
Sbjct: 358 EPVQVACGAAHTIIVAQE--GYKVWSLGRGRSGVLGNGNVVDCYIPTLVLWPPLVEDFHF 415

Query: 257 LNLQP 261
              +P
Sbjct: 416 KQEEP 420



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 46/252 (18%)

Query: 201 NIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
           N+P  V  +AAG  + L LA       VYS G G  G+LG GS  D+  P  ++     +
Sbjct: 9   NLPFKVTAVAAGEAHTLLLA---GDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQES 65

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG------CL------GHGNEECESVPKVVQ 306
           ++ V +AAGA+H+  +  DG V  WG+  YG      CL       H  +    + + V+
Sbjct: 66  IRIVGIAAGAYHSLALADDGSVWCWGYNLYGYYSVVPCLLNKFLELHPPDSSTLLLEEVE 125

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFG-CGESASLGHNAIADGQGNRHANVLTPQLV 365
               +K I +  G   +  +   G ++ +G C   +  G  +I            TP  V
Sbjct: 126 GKAQLKIISIKAGGMMSLSIDNLGALWMWGNCPHQSKEGIFSIVSN--------FTPTPV 177

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGK----------LYAFGAGDKGQLGIELV 415
                    VV+++  N      H  AL   G+           Y++G  + GQLG+   
Sbjct: 178 WDFH--GHTVVKVACGNE-----HIIALVSVGESYNGENDDLICYSWGNNNHGQLGL--- 227

Query: 416 NNQTERGNPERV 427
            +  +R NPE V
Sbjct: 228 GDTEDRPNPEMV 239



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 140/335 (41%), Gaps = 51/335 (15%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            ++   AAG   T+L++  G+VY++G+ + G    G +  +L  +     S ++I +V  
Sbjct: 12  FKVTAVAAGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIVGI 71

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP----NDVEPHP------LLGTLE---N 201
           A G + +  L+ +G V+   WG +    +   P      +E HP      LL  +E    
Sbjct: 72  AAGAYHSLALADDGSVWC--WGYNLYGYYSVVPCLLNKFLELHPPDSSTLLLEEVEGKAQ 129

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           + ++ I AG   +++L+    G       C    K G  S      P  +  F    +  
Sbjct: 130 LKIISIKAG--GMMSLSIDNLGALWMWGNCPHQSKEGIFSIVSNFTPTPVWDFHGHTV-- 185

Query: 262 VVVAAGAWHAAV---VGQ------DGRVC-TWGWGRYGCLGHGNEECESVPKVVQALND- 310
           V VA G  H      VG+      D  +C +WG   +G LG G+ E    P++V+  +  
Sbjct: 186 VKVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQD 245

Query: 311 --VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
                  +A G + T  V      ++FG GE+  LGH            +   P+LV  L
Sbjct: 246 SHWSIYEIACGAFHTAFV-----CWTFGLGENGQLGHGTT--------QSTSIPELVQEL 292

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
            Q    V  +S+   ++   HT  ++  G ++++G
Sbjct: 293 PQF---VNLVSVDCGLF---HTCVVSSDGDVWSWG 321


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 17/337 (5%)

Query: 49  IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAGA 104
           IAG    +AV  K G V++ G N SGQ G+GT EE      P+R+L GI I  + AA G 
Sbjct: 507 IAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGC 566

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAV 163
              + ++  G VY++G +  G+   G   +K  T P++++SL+  + +  AA+    +AV
Sbjct: 567 EHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSYHHSAV 625

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +S  G +  F   +  +LG     +   P  L+ +L +  + ++A G  + +A+    SG
Sbjct: 626 VSSNGELLMFGMNDCGQLGLDHTQHQHTPQ-LVDSLSSQVITEVACGLYHTIAIT---SG 681

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
             VYS G    G+LG G   + K P L++      + + V V+ G +H   + + G++ T
Sbjct: 682 GEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLIT 741

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG   YG LG G+++ ++  + V      K    + G Y T ++  +G V  FG      
Sbjct: 742 WGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQ 801

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           LG    A  +    A++  P  V S    N+ VV+I+
Sbjct: 802 LG----AGSRTLPSADLPLP--VPSNSLANDEVVRIA 832



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 158/322 (49%), Gaps = 36/322 (11%)

Query: 104 AGRT-MLIS----DAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQL-VESLKNIFVVQAA 155
           AGRT  L+S    D  ++++ G++++GE   G     +KL   P    +++++I     A
Sbjct: 454 AGRTERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDI-----A 508

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--GYCY 213
            GN   AV+ ++G V+T       + G+ T    V     +  L  I +  +AA  G  +
Sbjct: 509 GGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEH 568

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAA 272
           +LA+A   S  AVYS G    G+LG GS   + H PR+I+  +         A    H+A
Sbjct: 569 MLAVA---SDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KYHITTAAVSYHHSA 624

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
           VV  +G +  +G    G LG  + + +  P++V +L+      VA G Y T  ++  G+V
Sbjct: 625 VVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEV 684

Query: 333 YSFGCGESASLGHNAIADGQGNRHA-NVLTPQLV-TSLKQVNERVVQISLTNSIYWNAHT 390
           YSFG  +   LG           HA N+  P LV TSL + +E++V +S     Y+  HT
Sbjct: 685 YSFGKNDYGQLGLG---------HARNMKVPTLVKTSLGESDEKIVAVSCG---YY--HT 730

Query: 391 FALTESGKLYAFGAGDKGQLGI 412
             ++E GKL  +G  D GQLGI
Sbjct: 731 VTISEKGKLITWGRNDYGQLGI 752



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 19/290 (6%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSL-QGIRIIQAAAGAG 105
           A  G  H +AV S G VYS+G N  GQLG G+T  +   PR I SL +   I  AA    
Sbjct: 562 AANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 621

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + ++S  G++  FG +  G  + G+  T+   +PQLV+SL +  + + A G + T  ++
Sbjct: 622 HSAVVSSNGELLMFGMNDCG--QLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT 679

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 223
             G VY+F   +  +LG     N   P  +  +L   +  +V ++ GY + + ++     
Sbjct: 680 SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTIS---EK 736

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVC 281
             + + G    G+LG GS+ D K+     Q+  L L   +  A  G +H  ++  +GRV 
Sbjct: 737 GKLITWGRNDYGQLGIGSK-DHKNS---AQYVPLPLSSKIKTASCGCYHTLILMSNGRVM 792

Query: 282 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVS 327
            +G    G LG G+    S    +P    +L + + + +A G Y++++++
Sbjct: 793 VFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 14/198 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQAAAGAGRTMLI 110
           H+IA+TS G VYSFG N  GQLG G       P  +++  G    +I+  + G   T+ I
Sbjct: 674 HTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTI 733

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S+ G++  +G++ +G+   G +  K   S Q V    +  +  A+ G + T +L   GRV
Sbjct: 734 SEKGKLITWGRNDYGQLGIGSKDHK--NSAQYVPLPLSSKIKTASCGCYHTLILMSNGRV 791

Query: 171 YTFSWGNDARL--GHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPSGMAVY 227
             F   N  +L  G  T P+   P P+   +L N  VV+IAAG+ Y   +    SG    
Sbjct: 792 MVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGF-YSSYILTGRSGE--- 847

Query: 228 SVGCGLGGKLGHGSRTDE 245
             GCGL G     S+  +
Sbjct: 848 --GCGLDGAPDDASQAKD 863



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 20/238 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS  V+S G +  FG N  GQLG   T+ +  P+ + SL    I + A G   T+ I+  
Sbjct: 622 HSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSG 681

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL---KNIFVVQAAIGNFFTAVLSREGRV 170
           G+VY+FGK+ +G  + G+   + +  P LV++     +  +V  + G + T  +S +G++
Sbjct: 682 GEVYSFGKNDYG--QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKL 739

Query: 171 YTFSWGNDARLG----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            T+   +  +LG     H       P PL         ++ A+  CY   +      + V
Sbjct: 740 ITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMV 793

Query: 227 YSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVC 281
           +  G    G+LG GSRT      P  +    L N + V +AAG + + ++ G+ G  C
Sbjct: 794 F--GRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGC 849


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 168/363 (46%), Gaps = 37/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++G N +GQLG+G   +     P+  L  I ++  +AG   ++ 
Sbjct: 303 AGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGL--IDVVALSAGYSHSLA 360

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G   T    SP  V  L ++  + A  G+  +  L  +G 
Sbjct: 361 LRTDGTVWAWGYNSLGQLGDGT--TIPRPSPVQVPDLTDVVALSA--GDSHSLALRTDGT 416

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  +      +LG  T  + + P   +   +   VV ++AG  + LAL    +   V++ 
Sbjct: 417 VRAWGVNYSGQLGDGTTTHRLSP---VQVPDLTDVVALSAGGNHTLALRTNGT---VWAW 470

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T    PRL    Q+L L  VV ++AG +H+  V  DG V  WG    
Sbjct: 471 GSNSDGQLGDGTTT----PRL-SPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSD 525

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G       P  V  L DV A+  + GD  +  +  DG V+++G   S+ LG    
Sbjct: 526 GQLGDGTTTHRLTPVQVPGLTDVVAL--SAGDSHSLALRTDGTVWAWGSNSSSQLGDGTT 583

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                 R + V  P L          VV +S        AH+ AL   G ++A+G+   G
Sbjct: 584 TP----RGSPVQVPGLT--------DVVALSAG-----GAHSLALRTDGTVWAWGSNYYG 626

Query: 409 QLG 411
           QLG
Sbjct: 627 QLG 629



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 37/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++GSNSSGQLG GTT    R  P++      ++  +AG    + 
Sbjct: 3   AGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTP--RGSPVQVPGLTDVVALSAGNHHCLA 60

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G    +L  S   V  L ++  + A  G+ +T  L  +G 
Sbjct: 61  LRTDGTVWAWGSNSSGQLGDGTTTPRL--SSVQVPGLTDVVALSA--GSSYTLALRTDGT 116

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + +    +LG  T    + P  + G  +   VV +++G  + LAL    +   V++ 
Sbjct: 117 VWAWGYNFYGQLGDGTTTPRLAPVQVPGLTD---VVALSSGIYHSLALRTDGT---VWAW 170

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T     R +   Q+  L  VV ++AG +H+  V  DG V  WG    
Sbjct: 171 GDNASGQLGDGTAT-----RRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSNFS 225

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G       P  V  L +V A+  +  D  T  +  DG V+++G      LG    
Sbjct: 226 GQLGDGTATPRLSPVQVSGLTNVVAL--SADDSYTLALRTDGTVWAWGYNSYGQLG---- 279

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            DG         TP+L  S  QV      ++L+      +H+ AL   G ++A+G    G
Sbjct: 280 -DG-------TTTPRL--SPVQVPGLTNVVALSAGY---SHSLALRTDGTVWAWGYNYNG 326

Query: 409 QLG 411
           QLG
Sbjct: 327 QLG 329



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 167/364 (45%), Gaps = 39/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++G NS GQLG GTT    RP P++      ++  +AG   ++ 
Sbjct: 353 AGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIP--RPSPVQVPDLTDVVALSAGDSHSLA 410

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V A+G +  G+   G    +L  SP  V  L ++  + A  G   T  L   G 
Sbjct: 411 LRTDGTVRAWGVNYSGQLGDGTTTHRL--SPVQVPDLTDVVALSA--GGNHTLALRTNGT 466

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +D +LG  T    + P  +LG L N  VV ++AGY + LA+    +   V++ 
Sbjct: 467 VWAWGSNSDGQLGDGTTTPRLSPVQMLG-LTN--VVALSAGYYHSLAVHTDGT---VWAW 520

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T    P      Q+  L  VV ++AG  H+  +  DG V  WG    
Sbjct: 521 GSNSDGQLGDGTTTHRLTP-----VQVPGLTDVVALSAGDSHSLALRTDGTVWAWGSNSS 575

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
             LG G       P  V  L DV A+  + G   +  +  DG V+++G      LG    
Sbjct: 576 SQLGDGTTTPRGSPVQVPGLTDVVAL--SAGGAHSLALRTDGTVWAWGSNYYGQLG---- 629

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDK 407
            DG         TP+L   L      V  ++ T+++Y  A H+ AL   G   A+G    
Sbjct: 630 -DG-------TTTPRLFPVL------VSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYG 675

Query: 408 GQLG 411
           GQLG
Sbjct: 676 GQLG 679



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 20/301 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V ++G N SGQLG GTT     P  +  L    ++  +AG   T+ 
Sbjct: 403 AGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDL--TDVVALSAGGNHTLA 460

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G    +L  SP  +  L N+  + A  G + +  +  +G 
Sbjct: 461 LRTNGTVWAWGSNSDGQLGDGTTTPRL--SPVQMLGLTNVVALSA--GYYHSLAVHTDGT 516

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +D +LG  T  + + P  + G  +   VV ++AG  + LAL    +   V++ 
Sbjct: 517 VWAWGSNSDGQLGDGTTTHRLTPVQVPGLTD---VVALSAGDSHSLALRTDGT---VWAW 570

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G     +LG G+ T    P      Q+  L  VV ++AG  H+  +  DG V  WG   Y
Sbjct: 571 GSNSSSQLGDGTTTPRGSP-----VQVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYY 625

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G       P +V  L     ++   G   +  +  DG   ++G      LG    
Sbjct: 626 GQLGDGTTTPRLFPVLVSNLTGTSNLYAGAGH--SLALRTDGTGRAWGNNYGGQLGDGTS 683

Query: 349 A 349
           A
Sbjct: 684 A 684



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 48/383 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +++A+ + G V+++G N  GQLG GTT     P  +  L    ++  ++G   ++ 
Sbjct: 103 AGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGL--TDVVALSSGIYHSLA 160

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+   G    +L  SP  V  L ++  + A  G + +  +  +G 
Sbjct: 161 LRTDGTVWAWGDNASGQLGDGTATRRL--SPVQVPGLTDVVALSA--GGYHSLAVRTDGT 216

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T    + P  + G L N  VV ++A   Y LAL    +   V+
Sbjct: 217 VW--AWGSNFSGQLGDGTATPRLSPVQVSG-LTN--VVALSADDSYTLALRTDGT---VW 268

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG G+ T    PRL    Q+  L  VV ++AG  H+  +  DG V  WG+ 
Sbjct: 269 AWGYNSYGQLGDGTTT----PRL-SPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYN 323

Query: 287 RYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             G LG+G   +   S+P  V  L DV A+  + G   +  +  DG V+++G      LG
Sbjct: 324 YNGQLGNGIPTQRSPSIP--VFGLIDVVAL--SAGYSHSLALRTDGTVWAWGYNSLGQLG 379

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                     R + V  P L          VV +S  +S     H+ AL   G + A+G 
Sbjct: 380 DGTTIP----RPSPVQVPDLT--------DVVALSAGDS-----HSLALRTDGTVRAWGV 422

Query: 405 GDKGQLGIELVNNQTERGNPERV 427
              GQLG       T R +P +V
Sbjct: 423 NYSGQLGD---GTTTHRLSPVQV 442



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 149/332 (44%), Gaps = 46/332 (13%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           AAG   ++ +   G V+A+G +S G+   G   T    SP  V  L ++  + A  GN  
Sbjct: 2   AAGYSHSLALHTDGTVWAWGSNSSGQLGDGT--TTPRGSPVQVPGLTDVVALSA--GNHH 57

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLA 216
              L  +G V+ +   +  +LG  T        P L +++ +P    VV ++AG  Y LA
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGDGTT------TPRLSSVQ-VPGLTDVVALSAGSSYTLA 110

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           L    +   V++ G    G+LG G+ T    PRL    Q+  L  VV +++G +H+  + 
Sbjct: 111 LRTDGT---VWAWGYNFYGQLGDGTTT----PRL-APVQVPGLTDVVALSSGIYHSLALR 162

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            DG V  WG    G LG G       P  V  L DV A+  + G Y +  V  DG V+++
Sbjct: 163 TDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTDVVAL--SAGGYHSLAVRTDGTVWAW 220

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G   S  LG     DG        L+P  V+ L      VV +S  +S     +T AL  
Sbjct: 221 GSNFSGQLG-----DGTATPR---LSPVQVSGLTN----VVALSADDS-----YTLALRT 263

Query: 396 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            G ++A+G    GQLG       T R +P +V
Sbjct: 264 DGTVWAWGYNSYGQLGD---GTTTPRLSPVQV 292



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 16/201 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV + G V+++GSNS GQLG GTT     P  +  L    ++  +AG   ++ 
Sbjct: 503 AGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL--TDVVALSAGDSHSLA 560

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S   ++ G   T    SP  V  L ++  + A  G   +  L  +G 
Sbjct: 561 LRTDGTVWAWGSNS--SSQLGDGTTTPRGSPVQVPGLTDVVALSA--GGAHSLALRTDGT 616

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T    + P  L+  L     +   AG+   LAL    +G A  
Sbjct: 617 VW--AWGSNYYGQLGDGTTTPRLFPV-LVSNLTGTSNLYAGAGHS--LALRTDGTGRA-- 669

Query: 228 SVGCGLGGKLGHGSRTDEKHP 248
             G   GG+LG G+     HP
Sbjct: 670 -WGNNYGGQLGDGTSAFFLHP 689



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 19/148 (12%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           +AAG  H+  +  DG V  WG    G LG G       P  V  L DV A+  + G++  
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTDVVAL--SAGNHHC 58

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +  DG V+++G   S  LG          R ++V  P L          VV +S  +S
Sbjct: 59  LALRTDGTVWAWGSNSSGQLGDGTTTP----RLSSVQVPGLT--------DVVALSAGSS 106

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
                +T AL   G ++A+G    GQLG
Sbjct: 107 -----YTLALRTDGTVWAWGYNFYGQLG 129


>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
           congolense IL3000]
          Length = 1149

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 183/412 (44%), Gaps = 74/412 (17%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AGP H +A+TS G VYS+G   +G+LGHG  + E R R I +L    I+ A+ G   T +
Sbjct: 558 AGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTAV 617

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  GQVY FG++SFG  + G++G +    P++V   K   VV  + G   T +L  +G 
Sbjct: 618 LTKHGQVYVFGENSFG--QLGLKGQQPRLLPEVVPLPKRAIVV--SCGREHTCILLEDGD 673

Query: 170 VYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC--QPS 222
           +        + +G       + P  +  + L+ ++ +  +  IA+G    + L     P 
Sbjct: 674 LMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTMTLTAVQTPQ 733

Query: 223 GMAV-----------------------------------YSVGCGLGGKLGHGSRTDEKH 247
           G  V                                   +++GCG  G+LG G  T  + 
Sbjct: 734 GSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLGSGDDTPAQR 793

Query: 248 PRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESV--P 302
             L  +  + + + V  V  G   A  +G  G + +WGW  +G LGHG   E  ESV  P
Sbjct: 794 -NLFRRVVVPDFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGESVFTP 852

Query: 303 K---VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           K   VV+ L+ V  I VA G      +++ G+VY++  GE+A  GH     G G      
Sbjct: 853 KEISVVKTLSQV--IQVACGGTFVVALTQCGEVYTW--GEAAFCGH-----GNGVEKF-F 902

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           L P+ + SL+ ++              + H  AL+    +YA+G G  G  G
Sbjct: 903 LCPKRLASLQDISAVAAG---------DRHAAALSYDHTIYAWGNGPVGNGG 945



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 185/413 (44%), Gaps = 73/413 (17%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPR----PIRSLQGIRIIQAAAG 103
           +T+   V+S G++   QLG G ++E          E + R    P+RS  G  I +  AG
Sbjct: 386 LTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRS--GDHICKLTAG 443

Query: 104 AGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFT 161
           +     I   + ++Y +G++SFG+    ++G+  V++P  V+       VV  A G+F+ 
Sbjct: 444 SAFAAAIGLQSRRMYLWGQNSFGQCL--MEGSLTVSTPVAVDIPGQYSEVVDVACGSFYA 501

Query: 162 AVLSREGRVYTFSWGNDARLGHHT---------EPNDVEPHPLLGTLE--NIPVVQIAAG 210
           A+    G V T  WG    L              PN+ +    +   +  N  VV + AG
Sbjct: 502 AIAFSCGSVGT--WGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVALRAG 559

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAW 269
             + LA+    S  AVYS G    G+LGHG   +E+  R+I+    L+   +V A+ G +
Sbjct: 560 PFHCLAIT---SSGAVYSWGMERNGRLGHGDNKNEERMRVIDA---LSSHVIVDASCGCF 613

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H AV+ + G+V  +G   +G LG   ++   +P+VV      +AI V+ G   T ++ ED
Sbjct: 614 HTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREHTCILLED 671

Query: 330 GDVYSFGCGESASLG----------------HNAIADGQGNRHA------------NVLT 361
           GD+ + G   S+ +G                   ++   G+ HA             V T
Sbjct: 672 GDLMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTMTLTAVQT 731

Query: 362 PQ---LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           PQ   +  ++ ++NE V +  L +          L E+G+ +A G G  GQLG
Sbjct: 732 PQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLG 784



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 159/388 (40%), Gaps = 60/388 (15%)

Query: 60  SKGVVYSFGSNSSGQLGH----GTTEEEWRPR-------PIRSLQGIRIIQAAAGAGRTM 108
           SKGVV+++G+ +S + G      +    W P        P R    + ++  + GA    
Sbjct: 325 SKGVVFTWGNVASVKTGKKLQLSSPSNSWDPPQGSYTLIPTRMAIPVPVLSFSCGAYSCY 384

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIF---------VVQAAI 156
            ++   +V++ G D +  ++ G   +K + S  +V   E    +F         + +   
Sbjct: 385 FLTADNKVFSCGNDDW--SQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRSGDHICKLTA 442

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGY 211
           G+ F A +  + R   + WG ++      E +     P+     +IP     VV +A G 
Sbjct: 443 GSAFAAAIGLQSR-RMYLWGQNSFGQCLMEGSLTVSTPVA---VDIPGQYSEVVDVACGS 498

Query: 212 CYL-LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP------RLIEQFQLLNLQPVVV 264
            Y  +A +C   G   + V   L  K+      D   P      + I  F+  N + V +
Sbjct: 499 FYAAIAFSCGSVG--TWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVAL 556

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            AG +H   +   G V +WG  R G LGHG+ + E   +V+ AL+    +  + G + T 
Sbjct: 557 RAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTA 616

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           V+++ G VY FG      LG      GQ         P+L+  +  + +R + +S     
Sbjct: 617 VLTKHGQVYVFGENSFGQLG----LKGQ--------QPRLLPEVVPLPKRAIVVSCGRE- 663

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGI 412
               HT  L E G L A G+     +G+
Sbjct: 664 ----HTCILLEDGDLMACGSVRSSGVGV 687



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 157/417 (37%), Gaps = 83/417 (19%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           A  G  H+  +T  G VY FG NS GQLG    +    P  +   +  R I  + G   T
Sbjct: 608 ASCGCFHTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREHT 665

Query: 108 MLISDAGQVYAFGKDS-------FGEAEYGVQGTKL------------------------ 136
            ++ + G + A G          FG A + V    L                        
Sbjct: 666 CILLEDGDLMACGSVRSSGVGVGFG-ARFSVPRRILQNFLIMSVASGDLHAIASGTLRTM 724

Query: 137 ----VTSPQ----------LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
               V +PQ          L E +K   +    +G  F  +L+  G  +    G++ +LG
Sbjct: 725 TLTAVQTPQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLG 784

Query: 183 HHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
                +D      L     +P    V  +  G+ + +A+    S  A+YS G    G+LG
Sbjct: 785 ---SGDDTPAQRNLFRRVVVPDFEDVCAVDCGFSFAIAIG---SSGALYSWGWNTHGQLG 838

Query: 239 HGSRTDEKH----PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           HG   +       P+ I   + L+ Q + VA G      + Q G V TWG   +   G+G
Sbjct: 839 HGLAVELGESVFTPKEISVVKTLS-QVIQVACGGTFVVALTQCGEVYTWGEAAFCGHGNG 897

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
            E+    PK + +L D+ A  VA GD     +S D  +Y++G G   + G   +      
Sbjct: 898 VEKFFLCPKRLASLQDISA--VAAGDRHAAALSYDHTIYAWGNGPVGNGGAAGVM----- 950

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               V TP  +  +  V +               +TF +T+ G LY +G    GQ G
Sbjct: 951 ----VPTPVALNFVHPVRQLFCG---------QVNTFVITDVGDLYVWGLNTSGQCG 994



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 30/179 (16%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRY-----------GCLGHGNEECESVPKVVQALND 310
           V VA G+++AA+    G V TWG                     N++C     + +  N 
Sbjct: 492 VDVACGSFYAAIAFSCGSVGTWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNK 551

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
            K + +  G +    ++  G VYS+G   +  LGH    + +  R  + L+  ++     
Sbjct: 552 -KVVALRAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIV---- 606

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
                      ++     HT  LT+ G++Y FG    GQLG++    Q  R  PE V +
Sbjct: 607 -----------DASCGCFHTAVLTKHGQVYVFGENSFGQLGLK---GQQPRLLPEVVPL 651


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 11/291 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           +A  G  H++ +T  G VYS GSN  GQLGH    +  RP+ +  L    II  A G   
Sbjct: 38  KAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRK--RPQLVSGLDAYSIINVACGEMH 95

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +S  G+V+++G D++G+  + + GT L   P+L++SL    VVQ A G   +  L+ 
Sbjct: 96  SLALSRWGEVFSWGSDNYGQLGHQLGGT-LQIVPKLIKSLAKYQVVQIAAGQRHSVALTN 154

Query: 167 EGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            G ++ +   +  +LG  T  P +  P  +  +L  IP   IA G  +  A++   SG A
Sbjct: 155 AGEIFVWGANDFGQLGLGTITPYESTPTTVC-SLSGIPFALIACGANHTFAVS--KSG-A 210

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+  G  + G+LG      +K P  +    L N +   ++ G   +  +  DG V + G 
Sbjct: 211 VFGWGKNINGQLGLNDTVSKKFPTQLR--TLRNSRVRFISCGDEFSTFLTLDGGVFSCGA 268

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSF 335
           G YG LGHG    E +P+ V  L       ++ G  ++   V   G VYS+
Sbjct: 269 GMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 32/345 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           ++ +GS   G+LG G  EEE  + P+ +   +   +++AA GA  T+ ++  G+VY+ G 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
           + +G+  +     +    PQLV  L    ++  A G   +  LSR G V  FSWG+D   
Sbjct: 61  NDYGQLGHDQPRKR----PQLVSGLDAYSIINVACGEMHSLALSRWGEV--FSWGSDNYG 114

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LGH           L+ +L    VVQIAAG  + +AL    +   ++  G    G+LG 
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT---NAGEIFVWGANDFGQLGL 171

Query: 240 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           G+ T  E  P  +    L  +   ++A GA H   V + G V  WG    G LG  +   
Sbjct: 172 GTITPYESTPTTV--CSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVS 229

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           +  P  ++ L + +   ++ GD  +  ++ DG V+S G G    LGH           +N
Sbjct: 230 KKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGT--------SN 281

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 402
            + P+ V  L  +   + QIS         H+ A   S G++Y++
Sbjct: 282 EILPRQVLEL--MGSTITQISCGRQ-----HSLAFVPSRGRVYSY 319



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 19  LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 78
           L  + GG+ ++V + +   ++  + +  Q  AG  HS+A+T+ G ++ +G+N  GQLG G
Sbjct: 116 LGHQLGGTLQIVPKLI---KSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172

Query: 79  T-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           T T  E  P  + SL GI     A GA  T  +S +G V+ +GK+  G+   G+  T   
Sbjct: 173 TITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQL--GLNDTVSK 230

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             P  + +L+N  V   + G+ F+  L+ +G V++   G   +LGH    N++ P  +L 
Sbjct: 231 KFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLE 290

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            + +  + QI+ G  + LA    PS   VYS
Sbjct: 291 LMGST-ITQISCGRQHSLAFV--PSRGRVYS 318



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+ AV+  G V+ +G N +GQLG   T  +  P  +R+L+  R+   + G   +  +
Sbjct: 198 GANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFL 257

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
           +  G V++ G   +G+  +G  GT     P+ V  L    + Q + G   + A +   GR
Sbjct: 258 TLDGGVFSCGAGMYGQLGHG--GTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGR 315

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG---TLENIPVV 205
           VY++  G   +LG     N   P  +LG   +   +PVV
Sbjct: 316 VYSYGLGGAGQLGLRKPSNASTPQVVLGPWVSPSGVPVV 354


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 25/272 (9%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +I     G    +L+S+ G VY             V  T+ +  P+++E+   I V Q A
Sbjct: 76  KIEAVGCGDDEVILLSEKGSVYR------------VDVTQALYLPRMLEAFCRIPVSQVA 123

Query: 156 IGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            G+  T  L++EG+VYT  WG ++R  LG   +   +     + +L  +P+VQ++AG  +
Sbjct: 124 CGSRHTVALTKEGQVYT--WGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDH 181

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
             AL+   S   V+  G    G+LG G   D   P  ++    LNL+    ++ G  H A
Sbjct: 182 SFALSVSGS---VFGWGRNDCGQLGLGDSQDRCTPTSVDS---LNLKKTTSISCGKDHTA 235

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
           ++ + G V T+G G++G LGH +   E  P++V  L   K   +A G Y T V+ E+  +
Sbjct: 236 ILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKI 295

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           YSFGC +   LG +   D   +    VL PQ+
Sbjct: 296 YSFGCNDQNQLGRS--NDSHPSVPLPVLLPQV 325



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 10/212 (4%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIR 96
           EA CR   SQ   G  H++A+T +G VY++G NS GQLG G        P+ +RSL G+ 
Sbjct: 112 EAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMP 171

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           ++Q +AG   +  +S +G V+ +G++  G+   G+  ++   +P  V+SL        + 
Sbjct: 172 LVQVSAGGDHSFALSVSGSVFGWGRNDCGQL--GLGDSQDRCTPTSVDSLNLKKTTSISC 229

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   TA+L++ G V+TF  G   +LGH++  N++ P  L+  L    V +IA G  + L 
Sbjct: 230 GKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPR-LVAELWGAKVTRIACGRYHTLV 288

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
           L        +YS GC    +LG   R+++ HP
Sbjct: 289 LQ---ENNKIYSFGCNDQNQLG---RSNDSHP 314



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 25/220 (11%)

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 253
           +L     IPV Q+A G  + +AL  +     VY+ G    G+LG G +      P+ +  
Sbjct: 110 MLEAFCRIPVSQVACGSRHTVALTKEGQ---VYTWGQNSRGQLGLGKKGCSISSPQCVRS 166

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDV 311
              + L  V V+AG  H+  +   G V  +GWGR  C  LG G+ +    P  V +LN  
Sbjct: 167 LSGMPL--VQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
           K   ++ G   T ++++ G V++FG G+   LGHN+          N L P+LV  L   
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNS--------SRNELRPRLVAEL--W 272

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +V +I+         HT  L E+ K+Y+FG  D+ QLG
Sbjct: 273 GAKVTRIACGR-----YHTLVLQENNKIYSFGCNDQNQLG 307



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 2/150 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS A++  G V+ +G N  GQLG G +++   P  + SL   +    + G   
Sbjct: 174 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDH 233

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T +++  G V+ FG   FG+  +     +L   P+LV  L    V + A G + T VL  
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHNSSRNEL--RPRLVAELWGAKVTRIACGRYHTLVLQE 291

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
             ++Y+F   +  +LG   + +   P P+L
Sbjct: 292 NNKIYSFGCNDQNQLGRSNDSHPSVPLPVL 321



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 29/197 (14%)

Query: 226 VYSVGCG-----LGGKLGHGSRTDEKH----PRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
           + +VGCG     L  + G   R D       PR++E F  +   PV  VA G+ H   + 
Sbjct: 77  IEAVGCGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRI---PVSQVACGSRHTVALT 133

Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           ++G+V TWG    G LG G + C  S P+ V++L+ +  + V+ G   +F +S  G V+ 
Sbjct: 134 KEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFG 193

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +   LG   + D Q        TP  V SL    ++   IS         HT  LT
Sbjct: 194 WGRNDCGQLG---LGDSQDR-----CTPTSVDSLNL--KKTTSISCGKD-----HTAILT 238

Query: 395 ESGKLYAFGAGDKGQLG 411
           + G ++ FG+G  GQLG
Sbjct: 239 KHGTVFTFGSGQFGQLG 255



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +P++++A   +    VA G   T  ++++G VY++G      LG        G +  ++ 
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLG-------LGKKGCSIS 159

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +PQ V SL  +   +VQ+S         H+FAL+ SG ++ +G  D GQLG+    +  +
Sbjct: 160 SPQCVRSLSGMP--LVQVSAGGD-----HSFALSVSGSVFGWGRNDCGQLGL---GDSQD 209

Query: 421 RGNPERVD 428
           R  P  VD
Sbjct: 210 RCTPTSVD 217


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV   Q+  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G    M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P+  T+E   +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 315



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           +AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D GQ
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VYA+G +S+G+   G +  +   +P  VE    I  + A      +A  ++ G VY   W
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--W 334

Query: 176 G 176
           G
Sbjct: 335 G 335



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 148/327 (45%), Gaps = 25/327 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFG-----SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           Q  AG  H   VT +  +Y++      ++ +GQLGHG T     P+ + +L  I + Q +
Sbjct: 25  QVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVS 84

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNF 159
            G   T+ ++D G VY+FG D +G    G QG       SP LV    N  V+Q + G+ 
Sbjct: 85  CGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRPVLQVSCGDA 144

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALA 218
               L++EG VYT+  G   RLG  TE +   P  +       I  V       ++L   
Sbjct: 145 HVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVHAGPDGSFILR-- 202

Query: 219 CQPSGMAVYSVGCGLGGKLG-----HGSRTDEKHPRLIEQFQLLNLQP------VVVAAG 267
              +   + S G     KLG      G R+ +    +   +    ++P      V V+ G
Sbjct: 203 ---TNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKYNIVAVSPG 259

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             H+AV+   G + T+G  +YG LG G+ +E ++V  V  +L       VA GD +T + 
Sbjct: 260 QTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACGDRSTVIA 319

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQG 353
           + D  +YS G  E+  LG  A   G+G
Sbjct: 320 TSDNLIYSCGFSENGRLGFAAGETGKG 346



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 42/296 (14%)

Query: 139 SPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-------ARLGH-----HT 185
           +PQ +E   K    +Q + G+   AV++ E  +YT  W N         +LGH     + 
Sbjct: 10  TPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYT--WANAQGLTSMAGQLGHGDTASYK 67

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
            P  VE       L+ I V Q++ G  + +   C     AVYS G    G LG+G + D 
Sbjct: 68  APKRVE------ALDKIAVNQVSCGEDFTV---CVTDDGAVYSFGSDYYGCLGNGDQGDG 118

Query: 246 KH----PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
           +     P L+  F  +N   + V+ G  H   + ++G V TWG G +G LG G E+  S 
Sbjct: 119 EDCACSPSLVSFF--VNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSS 176

Query: 302 PKVV--QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           P+ V  +  + ++++H   G   +F++  +G + S G  E   LG N+ A G  ++  + 
Sbjct: 177 PQKVATRGRHGIRSVHA--GPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSY 234

Query: 360 LTP--QLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
             P     T++K +++  +V +S   +     H+  +   G L  FG+   GQLG+
Sbjct: 235 DIPCNYNFTTVKPLSKYNIVAVSPGQT-----HSAVIDGFGHLITFGSNKYGQLGV 285


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV   Q+  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G    M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P+  T+E   +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TMEKDRIIEIAA 315



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTME 306



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 3/121 (2%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           +AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D GQ
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           VYA+G +S+G+   G +  +   +P  +E    I  + A      +A  ++ G VY   W
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTMEK-DRIIEIAACHSTHTSAAKTQGGHVYM--W 334

Query: 176 G 176
           G
Sbjct: 335 G 335


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 173/383 (45%), Gaps = 41/383 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           + A +G  H++ + + G ++++G N  GQLG+GT ++   P P+       +I  A+G  
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTD---VISVASGYR 458

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T  +   G V+ +G + FG+   G     +   P  V+ +    V   A G+  +  L 
Sbjct: 459 HTAALRSDGTVWTWGMNRFGQLGEGT----VTDRPTPVQVVGLGGVTAIATGDNHSLALR 514

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G V+ + +    +LG  T  +  +P    G L NI  V IAAG  + LAL    +   
Sbjct: 515 SNGTVWAWGFNRYGQLGDGTAVDRRQPVQASG-LSNI--VAIAAGGSHSLALRSDGT--- 568

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           V++ G    G+LG+G+RT    P      Q + L  VV +AAG+ ++  +  DG V  WG
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTLVP-----VQAVGLSSVVSLAAGSLYSLALRADGTVWAWG 623

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           +   G LG G  +  + P  V  L+ + +I  A G Y +  +  DG V+++G      LG
Sbjct: 624 YNASGQLGVGTTQGSAQPLQVPGLSGITSI--AAGSYHSLALRSDGWVWAWGFNFEGQLG 681

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           +               TP+L   L       V I     I  + H+ A+   G ++A+G 
Sbjct: 682 N------------GTSTPRLSPGLVAGMSNAVAI-----IAGDQHSLAMKADGTVWAWGL 724

Query: 405 GDKGQLGIELVNNQTERGNPERV 427
             KGQLG     + TE   P +V
Sbjct: 725 NIKGQLG---TGDTTEAWFPVQV 744



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 168/370 (45%), Gaps = 48/370 (12%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGR 106
           +AG  HS+AV + G V+++G N   QLG G       P P+++    G+ ++   AG   
Sbjct: 305 VAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSS--PLPLQAGMTGGVTLV---AGYRH 359

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G  +++G + FG+   G    +   +P  V  L  +    A  G   T +L  
Sbjct: 360 SVALGADGTAWSWGDNVFGQ--LGDTTFEPRMAPVQVSGLA-LGRADATSGQLHTVMLGA 416

Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            GR++  +WG++   +LG+ T+ +   P P+        V+ +A+GY +  AL    +  
Sbjct: 417 NGRLW--AWGDNQQGQLGNGTQQDSSLPLPV----NLTDVISVASGYRHTAALRSDGT-- 468

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
            V++ G    G+LG G+ TD   P      Q++ L  V  +A G  H+  +  +G V  W
Sbjct: 469 -VWTWGMNRFGQLGEGTVTDRPTP-----VQVVGLGGVTAIATGDNHSLALRSNGTVWAW 522

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G+ RYG LG G       P     L+++ AI  A G   +  +  DG V++FG      L
Sbjct: 523 GFNRYGQLGDGTAVDRRQPVQASGLSNIVAI--AAGGSHSLALRSDGTVWAFGYNFDGQL 580

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT-NSIYWNAHTFALTESGKLYAF 402
           G+       G R    L P     L  V      +SL   S+Y    + AL   G ++A+
Sbjct: 581 GN-------GTRTW-TLVPVQAVGLSSV------VSLAAGSLY----SLALRADGTVWAW 622

Query: 403 GAGDKGQLGI 412
           G    GQLG+
Sbjct: 623 GYNASGQLGV 632



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 171/392 (43%), Gaps = 54/392 (13%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV S G V+++G N  GQLG GT+ ++  P  +  L   ++   AAG   ++ +   
Sbjct: 61  HSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL--TQVTSVAAGDQYSLALDAD 118

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G ++ G+   G   ++L+  PQ V +L N  VV  A G      L  +G V+ +
Sbjct: 119 GAVWAWGDNASGQLGDGTLTSRLL--PQRVSALSN--VVSLASGFAHVLALRADGTVWAW 174

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
               + +LG  T      P  + G      VV + AG    LAL    +   +++ G   
Sbjct: 175 GDNRNNQLGDGTLTRSSVPLQVPGLSG---VVAVVAGGSSSLALRADGT---LWAWGDNR 228

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
            G+LG G+       R I   Q+ +L   V V+ GA+HA  +  DG V  WG   YG LG
Sbjct: 229 YGQLGDGTTV-----RRITPVQVASLDSVVSVSVGAYHALALRADGTVWAWGHNAYGQLG 283

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI---- 348
            G     + P  V +L DV+ +    G+Y +  V  DG V+++G      LG   +    
Sbjct: 284 DGTNTQRTQPVSV-SLTDVRTL--VAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSP 340

Query: 349 ------------------------ADGQGNRHANVLTPQLVTSLKQVNERVVQIS----- 379
                                   ADG      + +  QL  +  +     VQ+S     
Sbjct: 341 LPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALG 400

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             ++     HT  L  +G+L+A+G   +GQLG
Sbjct: 401 RADATSGQLHTVMLGANGRLWAWGDNQQGQLG 432



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 39/364 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG   S+A+ + G ++++G N  GQLG GTT     P  + SL    ++  + GA   +
Sbjct: 206 VAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLD--SVVSVSVGAYHAL 263

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G V+A+G +++G+   G    +  T P  V SL ++  + A  GN+ +  +  +G
Sbjct: 264 ALRADGTVWAWGHNAYGQLGDGTNTQR--TQPVSV-SLTDVRTLVA--GNYHSLAVRTDG 318

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+  +WG++      T      P PL   +     V + AGY + +AL    +    +S
Sbjct: 319 AVW--AWGDNRYRQLGTGNLTSSPLPLQAGMTG--GVTLVAGYRHSVALGADGT---AWS 371

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G  + G+LG         PR+   Q   L L      +G  H  ++G +GR+  WG  +
Sbjct: 372 WGDNVFGQLGD----TTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQ 427

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG+G ++  S+P  V  L DV  I VA+G   T  +  DG V+++G      LG   
Sbjct: 428 QGQLGNGTQQDSSLPLPVN-LTDV--ISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGT 484

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           + D          TP  V  L  V               + H+ AL  +G ++A+G    
Sbjct: 485 VTDRP--------TPVQVVGLGGVTAIATG---------DNHSLALRSNGTVWAWGFNRY 527

Query: 408 GQLG 411
           GQLG
Sbjct: 528 GQLG 531



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 43/361 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+ + G V+++G N+ GQLG GT  +  +P  + SL  +R +   AG   ++ +   
Sbjct: 261 HALALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSV-SLTDVRTL--VAGNYHSLAVRTD 317

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G + + +   G     L +SP  +++     V   A G   +  L  +G  +  
Sbjct: 318 GAVWAWGDNRYRQLGTG----NLTSSPLPLQAGMTGGVTLVA-GYRHSVALGADGTAW-- 370

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG++   +LG  T    + P  + G    +      +G  + + L        +++ G 
Sbjct: 371 SWGDNVFGQLGDTTFEPRMAPVQVSGLA--LGRADATSGQLHTVMLGANGR---LWAWGD 425

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
              G+LG+G++ D   P  +      NL  V+ VA+G  H A +  DG V TWG  R+G 
Sbjct: 426 NQQGQLGNGTQQDSSLPLPV------NLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQ 479

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG G       P  V  L  V AI  ATGD  +  +  +G V+++G      LG     D
Sbjct: 480 LGEGTVTDRPTPVQVVGLGGVTAI--ATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVD 537

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
            +    A+ L+             +V I+   S     H+ AL   G ++AFG    GQL
Sbjct: 538 RRQPVQASGLS------------NIVAIAAGGS-----HSLALRSDGTVWAFGYNFDGQL 580

Query: 411 G 411
           G
Sbjct: 581 G 581



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           AIA G  HS+A+ S G V+++G N  GQLG GT  +  R +P+++     I+  AAG   
Sbjct: 502 AIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVD--RRQPVQASGLSNIVAIAAGGSH 559

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G V+AFG +  G+   G +   LV     V+++    VV  A G+ ++  L  
Sbjct: 560 SLALRSDGTVWAFGYNFDGQLGNGTRTWTLVP----VQAVGLSSVVSLAAGSLYSLALRA 615

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G V+ + +    +LG  T     +P  + G L  I    IAAG  + LAL    S   V
Sbjct: 616 DGTVWAWGYNASGQLGVGTTQGSAQPLQVPG-LSGI--TSIAAGSYHSLALR---SDGWV 669

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++ G    G+LG+G+ T    P L+          V + AG  H+  +  DG V  WG  
Sbjct: 670 WAWGFNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAGDQHSLAMKADGTVWAWGLN 725

Query: 287 RYGCLGHGNEECESVPKVVQALN 309
             G LG G+      P  VQ ++
Sbjct: 726 IKGQLGTGDTTEAWFPVQVQGIH 748



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 21/225 (9%)

Query: 37  GEACCRRENSQA---------IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           G A  RR+  QA          AG  HS+A+ S G V++FG N  GQLG+GT    W   
Sbjct: 533 GTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGT--RTWTLV 590

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
           P++++    ++  AAG+  ++ +   G V+A+G ++ G  + GV  T+    P  V  L 
Sbjct: 591 PVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASG--QLGVGTTQGSAQPLQVPGLS 648

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
            I  + A  G++ +  L  +G V+ + +  + +LG+ T    + P  L+  + N   V I
Sbjct: 649 GITSIAA--GSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG-LVAGMSN--AVAI 703

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            AG  + LA+    +   V++ G  + G+LG G  T+   P  ++
Sbjct: 704 IAGDQHSLAMKADGT---VWAWGLNIKGQLGTGDTTEAWFPVQVQ 745



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 32/278 (11%)

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           V+ A+G + +  +  +G V+ + +    +LG  T  +   P  + G  +   V  +AAG 
Sbjct: 53  VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQ---VTSVAAGD 109

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            Y LAL       AV++ G    G+LG G+ T    P+ +          V +A+G  H 
Sbjct: 110 QYSLALDADG---AVWAWGDNASGQLGDGTLTSRLLPQRVSALS----NVVSLASGFAHV 162

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
             +  DG V  WG  R   LG G     SVP  V  L+ V  + V  G  ++  +  DG 
Sbjct: 163 LALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGV--VAVVAGGSSSLALRADGT 220

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           ++++G      LG     DG   R    +TP  V SL  V         +   Y   H  
Sbjct: 221 LWAWGDNRYGQLG-----DGTTVRR---ITPVQVASLDSVVSV------SVGAY---HAL 263

Query: 392 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           AL   G ++A+G    GQLG       T+R  P  V +
Sbjct: 264 ALRADGTVWAWGHNAYGQLGD---GTNTQRTQPVSVSL 298



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 19/153 (12%)

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
           L PV +A G +H+  V  DG V  WG+ R G LG G    ++ P  V  L  V +  VA 
Sbjct: 50  LPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQVTS--VAA 107

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           GD  +  +  DG V+++G   S  LG   +         + L PQ V++L  V      +
Sbjct: 108 GDQYSLALDADGAVWAWGDNASGQLGDGTL--------TSRLLPQRVSALSNV------V 153

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           SL +     AH  AL   G ++A+G     QLG
Sbjct: 154 SLASGF---AHVLALRADGTVWAWGDNRNNQLG 183


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 163/351 (46%), Gaps = 32/351 (9%)

Query: 9   KPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSIAVTSK 61
           KP+ +A    LK    G W +         + C  E  Q+I       +     +  T  
Sbjct: 14  KPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQSIRQACVFGSAGNEVLYTTVD 64

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
             ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G
Sbjct: 65  DEIFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  +
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           +G  +  N   P  + G L+N  V+ IA G   + ++A   +G  VY  G    G+LG G
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLG 240

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           S  ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S
Sbjct: 241 SSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298

Query: 301 VPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
            P  V    D    + A H A   +T+   ++ G VY +G C G+S  L H
Sbjct: 299 YPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 346



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 9/283 (3%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
           I  T    VYS G+N+SG LG G       PR + S  G +II  +AG+G   ++++  G
Sbjct: 59  IFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDG 118

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            VY++G +S+   + G  GT   TSP L+    +  VVQ A G+  +  L+ EG VYT+ 
Sbjct: 119 GVYSWGHNSY--MQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWG 176

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           + N  ++G  +  N   P  +   + N  ++ I  G    L   C      VYS G    
Sbjct: 177 YNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSL---CVTDSGEVYSWGYNGN 233

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LG G+  ++ +P  +   Q + +  VV   G  HA  +  +G V  WG   YG LG G
Sbjct: 234 GQLGVGNNVNQTNPCRVAALQGVVIAQVV--CGYAHALALTDNGVVFGWGANSYGQLGSG 291

Query: 295 NEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           N+     P +V   +  V  +      +++   ++ G +Y +G
Sbjct: 292 NKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 18/202 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VYS+G    G LG G  +    PRL+E F    +  +   +G  H  V+ QDG V +WG 
Sbjct: 67  VYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGP-HVLVLTQDGGVYSWGH 125

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             Y  LG+G     + P ++      K + +A G + +  ++ +G+VY++G      +G 
Sbjct: 126 NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGS 185

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            + A+ QG       +P+ VT+    N+R++ I+   +      +  +T+SG++Y++G  
Sbjct: 186 GSTAN-QG-------SPRKVTACIG-NKRIIDITCGQTT-----SLCVTDSGEVYSWGYN 231

Query: 406 DKGQLGIELVNNQTERGNPERV 427
             GQLG   V N   + NP RV
Sbjct: 232 GNGQLG---VGNNVNQTNPCRV 250



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 17/243 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +GP H + +T  G VYS+G NS  QLG+G T     P  +      +++Q A G+  +M 
Sbjct: 107 SGP-HVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VY +G ++ G+   G    +   SP+ V + + N  ++    G   +  ++  G
Sbjct: 166 LTTEGEVYTWGYNNCGQIGSGSTANQ--GSPRKVTACIGNKRIIDITCGQTTSLCVTDSG 223

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            VY++ +  + +LG     N   P   +  L+ + + Q+  GY + LAL        V+ 
Sbjct: 224 EVYSWGYNGNGQLGVGNNVNQTNP-CRVAALQGVVIAQVVCGYAHALALT---DNGVVFG 279

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTWG 284
            G    G+LG G++ +   P      Q+      VV   A H    +A   Q G +  WG
Sbjct: 280 WGANSYGQLGSGNKANTCTP-----LQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334

Query: 285 WGR 287
             R
Sbjct: 335 QLR 337



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 26/292 (8%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN-FFTAVLSREGRVYTF 173
           +VY+ G ++ G    G   + L   P+L+ES     ++  + G+     VL+++G VY  
Sbjct: 66  KVYSLGTNTSGCLGVGDNSSSL--EPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVY-- 121

Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG+++  +LG+        P  L   + N  VVQIA G  + +AL  +     VY+ G 
Sbjct: 122 SWGHNSYMQLGNGGTSPGTSPSLLSRNISN-KVVQIACGSHHSMALTTEGE---VYTWGY 177

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G++G GS  ++  PR +    + N + + +  G   +  V   G V +WG+   G L
Sbjct: 178 NNCGQIGSGSTANQGSPRKVTAC-IGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQL 236

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G GN   ++ P  V AL  V    V  G      ++++G V+ +G      L       G
Sbjct: 237 GVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQL-------G 289

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
            GN+ AN  TP       QV  R+ ++    + +++  + A  +SG +Y +G
Sbjct: 290 SGNK-ANTCTPL------QVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 7/149 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAG 105
           Q   G  HS+A+T++G VY++G N+ GQ+G G+T  +  PR + +  G  RII    G  
Sbjct: 155 QIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQT 214

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++ ++D+G+VY++G +  G  + GV      T+P  V +L+ + + Q   G      L+
Sbjct: 215 TSLCVTDSGEVYSWGYN--GNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEP 192
             G V  F WG ++  +LG   + N   P
Sbjct: 273 DNGVV--FGWGANSYGQLGSGNKANTCTP 299



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)

Query: 144 ESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
           E +  +F   Q+A    FT +   + +VY+        LG     + +EP  LL +    
Sbjct: 43  EKINLVFTFGQSATEVIFTTL---DEKVYSLGTNTSGCLGVGDNSSSLEPR-LLESFSGQ 98

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            ++ ++AG    + +  Q  G  VYS G     +LG+G  +    P L+ +   ++ + V
Sbjct: 99  KIISLSAGSGPHVLVLTQDGG--VYSWGHNSYMQLGNGGTSPGTSPSLLSRN--ISNKVV 154

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDY 321
            +A G+ H+  +  +G V TWG+   G +G G+   +  P KV   + + + I +  G  
Sbjct: 155 QIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQT 214

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
           T+  V++ G+VYS+G   +  LG        GN + N   P  V +L+ V   + Q+   
Sbjct: 215 TSLCVTDSGEVYSWGYNGNGQLG-------VGN-NVNQTNPCRVAALQGV--VIAQV--- 261

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +   AH  ALT++G ++ +GA   GQLG
Sbjct: 262 --VCGYAHALALTDNGVVFGWGANSYGQLG 289



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q + G  H++A+T  GVV+ +G+NS GQLG G       P  + +  G  +  AA    
Sbjct: 259 AQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTPLQVATRIGRVVCLAATHYS 318

Query: 106 RTMLISD-AGQVYAFGK 121
            +    + +G +Y +G+
Sbjct: 319 HSSAARNQSGHIYMWGQ 335


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 22/241 (9%)

Query: 174 SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           SWG   +  LGH +  N+  P P+  +L+   V+Q+A G  +  AL    S   +YS G 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIK-SLKEKGVIQVAVGPQHCSALC---SSGQIYSWGI 56

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           GL G+LGHG+  D   P+++   +  N   V +A GA H+A + QDG++ +WG G  G L
Sbjct: 57  GLNGRLGHGNIQDSSAPKMLASTKK-NCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGEL 115

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G+G    +  P +V  L D+   +VA G  TTF  +  G ++S+G G+   L       G
Sbjct: 116 GNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCL-------G 168

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G+R  + L P LV   ++  +R+++++         H  ALTE GKL+ +G G  G  G
Sbjct: 169 LGDRE-DRLEPSLVRLREE--DRIIRVACGEH-----HCLALTEDGKLWGWGRGTGGCHG 220

Query: 412 I 412
           +
Sbjct: 221 L 221



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 24/268 (8%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           P+ ++SLK   V+Q A+G    + L   G++Y++  G + RLGH    +   P  L  T 
Sbjct: 21  PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTK 80

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           +N   VQIA G  +   L        +YS G GL G+LG+G R D+  P L+   +L +L
Sbjct: 81  KNCTAVQIACGAAHSAYLT---QDGKLYSWGRGLNGELGNGERHDQWTPNLV--LRLRDL 135

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
               VA G          G + +WG G++GCLG G+ E    P +V+   + + I VA G
Sbjct: 136 VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACG 195

Query: 320 DYTTFVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
           ++    ++EDG ++ +G G      LGH           + VL+P     L    +R + 
Sbjct: 196 EHHCLALTEDGKLWGWGRGTGGCHGLGHT----------SEVLSPH---KLPMPEDRTI- 241

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAG 405
           +S++   +   H+  LT  G ++ FG+G
Sbjct: 242 VSMSCGRW---HSAYLTIRGDIFCFGSG 266



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 11/276 (3%)

Query: 66  SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           S+G+  +  LGHG+   E  P+PI+SL+   +IQ A G      +  +GQ+Y++G    G
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60

Query: 126 EAEYG-VQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
              +G +Q +   ++P+++ S  KN   VQ A G   +A L+++G++Y++  G +  LG+
Sbjct: 61  RLGHGNIQDS---SAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGN 117

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
               +   P+ +L  L ++ V  +A G       AC   G+ ++S G G  G LG G R 
Sbjct: 118 GERHDQWTPNLVL-RLRDLVVSYVACG--TNTTFACTGGGL-LFSWGSGKHGCLGLGDRE 173

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           D   P L+   +   +  + VA G  H   + +DG++  WG G  GC G G+      P 
Sbjct: 174 DRLEPSLVRLREEDRI--IRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPH 231

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            +    D   + ++ G + +  ++  GD++ FG G 
Sbjct: 232 KLPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSGR 267



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 13/244 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
           Q   GP H  A+ S G +YS+G   +G+LGHG  ++   P+ + S  +    +Q A GA 
Sbjct: 34  QVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAA 93

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  ++  G++Y++G+   GE   G +  +   +P LV  L+++ V   A G   T   +
Sbjct: 94  HSAYLTQDGKLYSWGRGLNGELGNGERHDQW--TPNLVLRLRDLVVSYVACGTNTTFACT 151

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G ++++  G    LG     + +EP  L+   E   ++++A G  + LAL        
Sbjct: 152 GGGLLFSWGSGKHGCLGLGDREDRLEP-SLVRLREEDRIIRVACGEHHCLALT---EDGK 207

Query: 226 VYSVGCGLGG--KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           ++  G G GG   LGH S     H   + + + +    V ++ G WH+A +   G +  +
Sbjct: 208 LWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTI----VSMSCGRWHSAYLTIRGDIFCF 263

Query: 284 GWGR 287
           G GR
Sbjct: 264 GSGR 267



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 2/135 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G   + A T  G+++S+GS   G LG G  E+   P  +R  +  RII+ A G  
Sbjct: 138 SYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEH 197

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             + +++ G+++ +G+ + G   +G+  T  V SP  +   ++  +V  + G + +A L+
Sbjct: 198 HCLALTEDGKLWGWGRGTGG--CHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLT 255

Query: 166 REGRVYTFSWGNDAR 180
             G ++ F  G   R
Sbjct: 256 IRGDIFCFGSGRGFR 270


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 163/363 (44%), Gaps = 46/363 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G    +L++  G+++++G++S G   +G++    V +P+L+++
Sbjct: 289 PKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--VPNPKLIDT 346

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
           L  + +   A G   T  ++  G +YT  WG+ A     LGH +E +   P  + G +E 
Sbjct: 347 LAGMNIELVACGENHTCAVTFSGDLYT--WGDGAYNCGLLGHGSEASHWIPKRIGGDMEG 404

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I V  ++ G  +  A+    S   +++ G G  G LGHG  +    PR +E   L  L+ 
Sbjct: 405 IHVSYVSCGPWHTAAVT---SVGQLFTFGDGTFGALGHGDHSSATVPREVE--TLRGLRT 459

Query: 262 VVVAAGAWHAAVVGQD---------------GRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           + V+ G WH A   +                G++ TWG G    LGHG++E    P+ V 
Sbjct: 460 IRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVV 519

Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
           AL D     VA G   T  ++  G VY+ G   S S G        GN  A    P +V 
Sbjct: 520 ALGDENICQVACGHNLTLALTAAGRVYTMG---STSYGQ------LGNPRATGKVPAIVE 570

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 426
              ++  ++++     S     H   LT   ++Y +G G  GQLG     +  +R  P  
Sbjct: 571 G--KIAGKIIEEIACGSY----HVAVLTSKAEVYTWGKGTNGQLG---HGDNKDRNQPTV 621

Query: 427 VDI 429
           VD 
Sbjct: 622 VDF 624



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 26/294 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ AVT  G +Y++G  +   G LGHG+    W P+ I   ++GI +   + G   T
Sbjct: 358 GENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHT 417

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---L 164
             ++  GQ++ FG  +FG   +G   +   T P+ VE+L+ +  ++ + G + TA    +
Sbjct: 418 AAVTSVGQLFTFGDGTFGALGHGDHSS--ATVPREVETLRGLRTIRVSCGVWHTAAAVEI 475

Query: 165 SRE------------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           + E            G+++T+  G++ RLGH  +   + P  ++  L +  + Q+A G+ 
Sbjct: 476 TTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVA-LGDENICQVACGHN 534

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
             LAL    +   VY++G    G+LG+  R   K P ++E  ++       +A G++H A
Sbjct: 535 LTLALT---AAGRVYTMGSTSYGQLGN-PRATGKVPAIVEG-KIAGKIIEEIACGSYHVA 589

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           V+     V TWG G  G LGHG+ +  + P VV  L D +   VA G   T ++
Sbjct: 590 VLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAII 643



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           +PK +++   +   ++A G     +V++ G+++S+G      LGH   AD        V 
Sbjct: 288 LPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--------VP 339

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            P+L+ +L  +N  +V            HT A+T SG LY +G G
Sbjct: 340 NPKLIDTLAGMNIELVACG-------ENHTCAVTFSGDLYTWGDG 377


>gi|294935314|ref|XP_002781381.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
           50983]
 gi|239891962|gb|EER13176.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
           50983]
          Length = 359

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 164/375 (43%), Gaps = 47/375 (12%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGS +SGQLGHG   +E +P  + SL  IR++  A G   T+ +   G V+  G
Sbjct: 3   DGRVYTFGSGTSGQLGHGVLRDEPQPLLVSSLSRIRLVAVACGDRHTLFLGVTGLVFGTG 62

Query: 121 KDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +++FG  +      +  +SP+   V+S  +I  +    G   + VL   GRV  F W   
Sbjct: 63  RNTFG--QLACDDLRDFSSPRRIDVDSFGSI-PIDVRCGGDHSMVLLANGRVVAFGWNAF 119

Query: 179 ARLG---HH--TEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLALACQPSGMAVYS 228
            +LG    H  T P      P   TL N P      V ++ G+ + L LA   SG  VYS
Sbjct: 120 GQLGIGISHLGTSPVSAISSP---TLVNPPGPSVRFVSVSCGFAHSLLLA--DSGR-VYS 173

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGR 287
            G G  G+LG+  R+    P LI       +    V+ G  H+ V+ G  G V  +G G 
Sbjct: 174 CGMGTHGQLGNDERSHCWVPTLIPTISRCTM----VSCGGHHSLVLCGPMGEVYAFGSGS 229

Query: 288 YGCLGHGNEECE-SVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G LG G++  + S+P KV   L  V A+    G ++  +  +   +Y FG G    LG 
Sbjct: 230 TGKLGRGDDMGDTSIPVKVSGQLPPVAAV-CCGGAHSLVITRDKSALYGFGMGRRGQLG- 287

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               DG    H     P             V + +        HT A  ES     FG  
Sbjct: 288 ----DGLRRSHPLPTGP-------------VAVGVKCIAGGGYHTLAALESRGFIVFGRS 330

Query: 406 DKGQLGIELVNNQTE 420
            +GQLG+  V + ++
Sbjct: 331 TRGQLGVGFVEDVSD 345



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 131/311 (42%), Gaps = 30/311 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 112
           H++ +   G+V+  G N+ GQL      +   PR I     G   I    G   +M++  
Sbjct: 48  HTLFLGVTGLVFGTGRNTFGQLACDDLRDFSSPRRIDVDSFGSIPIDVRCGGDHSMVLLA 107

Query: 113 AGQVYAFGKDSFGE-----AEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSR 166
            G+V AFG ++FG+     +  G      ++SP LV     ++  V  + G   + +L+ 
Sbjct: 108 NGRVVAFGWNAFGQLGIGISHLGTSPVSAISSPTLVNPPGPSVRFVSVSCGFAHSLLLAD 167

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV----QIAAGYCYLLALACQPS 222
            GRVY+   G   +LG     ND   H  + TL  IP +     ++ G  + L L C P 
Sbjct: 168 SGRVYSCGMGTHGQLG-----NDERSHCWVPTL--IPTISRCTMVSCGGHHSLVL-CGPM 219

Query: 223 GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQD-GR 279
           G  VY+ G G  GKLG G    D   P  +       L PV  V  G  H+ V+ +D   
Sbjct: 220 G-EVYAFGSGSTGKLGRGDDMGDTSIPVKVSG----QLPPVAAVCCGGAHSLVITRDKSA 274

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           +  +G GR G LG G      +P    A+  VK I  A G Y T    E      FG   
Sbjct: 275 LYGFGMGRRGQLGDGLRRSHPLPTGPVAVG-VKCI--AGGGYHTLAALESRGFIVFGRST 331

Query: 340 SASLGHNAIAD 350
              LG   + D
Sbjct: 332 RGQLGVGFVED 342



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 106/263 (40%), Gaps = 31/263 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--------QGIRIIQAAAGAG 105
           HS+ + + G V +FG N+ GQLG G +     P    S           +R +  + G  
Sbjct: 101 HSMVLLANGRVVAFGWNAFGQLGIGISHLGTSPVSAISSPTLVNPPGPSVRFVSVSCGFA 160

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++L++D+G+VY+ G  + G  + G         P L+ ++    +V    G+    +  
Sbjct: 161 HSLLLADSGRVYSCGMGTHG--QLGNDERSHCWVPTLIPTISRCTMVSCG-GHHSLVLCG 217

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             G VY F  G+  +LG   +  D   P  + G L   PV  +  G  + L +    S  
Sbjct: 218 PMGEVYAFGSGSTGKLGRGDDMGDTSIPVKVSGQLP--PVAAVCCGGAHSLVITRDKS-- 273

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGR 279
           A+Y  G G  G+LG G R    HP        L   PV V     A G +H     +   
Sbjct: 274 ALYGFGMGRRGQLGDGLR--RSHP--------LPTGPVAVGVKCIAGGGYHTLAALESRG 323

Query: 280 VCTWGWGRYGCLGHGNEECESVP 302
              +G    G LG G  E  S P
Sbjct: 324 FIVFGRSTRGQLGVGFVEDVSDP 346


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 167/378 (44%), Gaps = 39/378 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A TS G V+ +G N  GQLG GTT +   P  +  L  G+  I  AAG   T 
Sbjct: 373 AGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAI--AAGNYHTC 430

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +  V+ +G + +G+   G   T   ++P  V  L +  V   A GN+ T  L+  G
Sbjct: 431 ALTGSDGVWCWGDNFYGQLGDGT--TTNRSTPGAVSGLPS-GVTAIAAGNYHTCALTSSG 487

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAV 226
            V+ +   +  +LG  T  N   P    G +  +P  V  IAAG  +  AL    S   V
Sbjct: 488 GVWCWGRNDSGQLGDGTTTNRSTP----GAVGGLPSGVTAIAAGDYHTCALM---SSGGV 540

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGW 285
           +  G    G+LG GS TD   P  +     L    + +AAG +H  A+ G DG  C WG 
Sbjct: 541 WCWGLNNRGQLGDGSYTDSSTPVAVGG---LPSGVMAIAAGNYHTCALTGSDGVWC-WGT 596

Query: 286 GRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G LG G     S P  V  L + V AI  A G+Y T  ++  G V+ +G   S  LG
Sbjct: 597 NSDGQLGDGTTTNRSTPVAVSGLPSGVTAI--AAGNYHTCALTSSGGVWCWGYNLSGQLG 654

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                        N  TP  V+ L      V  I+  +      HT ALT SG ++ +G 
Sbjct: 655 DGTTT--------NRSTPGAVSGLP---SGVTAIAAGDE-----HTCALTGSGGVWCWGD 698

Query: 405 GDKGQLGIELVNNQTERG 422
              GQLG     N++  G
Sbjct: 699 NYYGQLGDGTTTNRSTPG 716



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 164/378 (43%), Gaps = 39/378 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+TS G V+ +G N SGQLG G+  +   P  +  L  G+  I  AAG   T 
Sbjct: 322 AGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAI--AAGGAHTC 379

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
             + +G V+ +G + +G+   G   T   ++P  V  L +  V   A GN+ T  L+   
Sbjct: 380 ARTSSGGVWCWGGNFYGQLGDGT--TTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSD 436

Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 224
            V+   WG++   +LG  T  N   P    G +  +P  V  IAAG  +  AL    S  
Sbjct: 437 GVW--CWGDNFYGQLGDGTTTNRSTP----GAVSGLPSGVTAIAAGNYHTCALT---SSG 487

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+  G    G+LG G+ T+   P  +     L      +AAG +H   +   G V  WG
Sbjct: 488 GVWCWGRNDSGQLGDGTTTNRSTPGAVGG---LPSGVTAIAAGDYHTCALMSSGGVWCWG 544

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G LG G+    S P  V  L     + +A G+Y T  ++    V+ +G      LG
Sbjct: 545 LNNRGQLGDGSYTDSSTPVAVGGLPS-GVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLG 603

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                DG      N  TP  V+ L      V  I+       N HT ALT SG ++ +G 
Sbjct: 604 -----DGT---TTNRSTPVAVSGLP---SGVTAIAAG-----NYHTCALTSSGGVWCWGY 647

Query: 405 GDKGQLGIELVNNQTERG 422
              GQLG     N++  G
Sbjct: 648 NLSGQLGDGTTTNRSTPG 665



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 157/377 (41%), Gaps = 41/377 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  ++ A+TS G V+ +G N SGQLG G+      P  +  L  G+  I  AAG   T 
Sbjct: 271 AGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSGVTAI--AAGGAHTC 328

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+ +G +  G+   G    +  ++P  V  L +  V   A G   T   +  G
Sbjct: 329 ALTSSGGVWCWGGNDSGQLGDGSYTDR--STPGAVSGLPS-GVTAIAAGGAHTCARTSSG 385

Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 224
            V+   WG +   +LG  T  +   P    G +  +P  V  IAAG  +  AL       
Sbjct: 386 GVW--CWGGNFYGQLGDGTTTDRSTP----GAVSGLPSGVTAIAAGNYHTCALTGSD--- 436

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+  G    G+LG G+ T+   P  +     L      +AAG +H   +   G V  WG
Sbjct: 437 GVWCWGDNFYGQLGDGTTTNRSTPGAVSG---LPSGVTAIAAGNYHTCALTSSGGVWCWG 493

Query: 285 WGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
               G LG G     S P  V  L + V AI  A GDY T  +   G V+ +G      L
Sbjct: 494 RNDSGQLGDGTTTNRSTPGAVGGLPSGVTAI--AAGDYHTCALMSSGGVWCWGLNNRGQL 551

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G  +  D          TP  V  L      V+ I+       N HT ALT S  ++ +G
Sbjct: 552 GDGSYTDSS--------TPVAVGGLP---SGVMAIAAG-----NYHTCALTGSDGVWCWG 595

Query: 404 AGDKGQLGIELVNNQTE 420
               GQLG     N++ 
Sbjct: 596 TNSDGQLGDGTTTNRST 612



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 158/380 (41%), Gaps = 36/380 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+T  G V+ +G N SGQLG G+  +   P  +  L  G+  I  AAG   T 
Sbjct: 67  AGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAI--AAGGAHTC 124

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V  +G + FG+   G    +  ++P  V  L +  V   A G   T  L   G
Sbjct: 125 ALTSSGGVMCWGGNYFGQLGDGSYTDR--STPVAVSGLPS-GVTAIAAGGAHTCALMSSG 181

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+ + +    +LG  +    + P  + G      V  IAAGY +  AL        V+ 
Sbjct: 182 GVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSE--VTAIAAGYAHTCALTGS---GGVWC 236

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG GS TD   P  +     L      +AAG  +   +   G V  WG    
Sbjct: 237 WGDNGFGQLGDGSFTDSSTPAAVGG---LPSGVTAIAAGGRYTCALTSSGGVWCWGRNDS 293

Query: 289 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LG G+    S P  V  L + V AI  A G   T  ++  G V+ +G  +S  LG  +
Sbjct: 294 GQLGDGSFTNRSTPGAVGGLPSGVTAI--AAGGAHTCALTSSGGVWCWGGNDSGQLGDGS 351

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             D          TP  V+ L      V  I+        AHT A T SG ++ +G    
Sbjct: 352 YTDRS--------TPGAVSGLP---SGVTAIAAG-----GAHTCARTSSGGVWCWGGNFY 395

Query: 408 GQLGIELVNNQTERGNPERV 427
           GQLG       T+R  P  V
Sbjct: 396 GQLGD---GTTTDRSTPGAV 412



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 156/364 (42%), Gaps = 33/364 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+T    V+ +G N  GQLG GTT     P  +  L  G+  I  AAG   T 
Sbjct: 424 AGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGNYHTC 481

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+ +G++  G+   G   T   ++P  V  L +  V   A G++ T  L   G
Sbjct: 482 ALTSSGGVWCWGRNDSGQLGDGT--TTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSG 538

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+ +   N  +LG  +  +   P  + G      V+ IAAG  +  AL        V+ 
Sbjct: 539 GVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG--VMAIAAGNYHTCALTGSD---GVWC 593

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G+ T+   P  +     L      +AAG +H   +   G V  WG+   
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSG---LPSGVTAIAAGNYHTCALTSSGGVWCWGYNLS 650

Query: 289 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LG G     S P  V  L + V AI  A GD  T  ++  G V+ +G      LG   
Sbjct: 651 GQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGDEHTCALTGSGGVWCWGDNYYGQLG--- 705

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG      N  TP  V+ L      V  I+    +Y   HT ALT SG +  +G    
Sbjct: 706 --DGT---TTNRSTPGAVSGLP---SGVTAIAA--GVY---HTCALTGSGGVMCWGNNGD 752

Query: 408 GQLG 411
           GQLG
Sbjct: 753 GQLG 756



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 139/338 (41%), Gaps = 37/338 (10%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           LQG+  I  AAG+  T  ++ +G+V+ +G +  G+   G    +  ++P  V  L +  V
Sbjct: 59  LQGVTAI--AAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDR--STPVAVSGLPS-GV 113

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
              A G   T  L+  G V    WG +   +LG  +  +   P  + G      V  IAA
Sbjct: 114 TAIAAGGAHTCALTSSGGV--MCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG--VTAIAA 169

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  +  AL    S   V+  G  L G+LG GS      P  +     L  +   +AAG  
Sbjct: 170 GGAHTCALM---SSGGVWCWGYNLSGQLGDGSTIYHITPVAVSG---LPSEVTAIAAGYA 223

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
           H   +   G V  WG   +G LG G+    S P  V  L        A G YT  + S  
Sbjct: 224 HTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCALTSS- 282

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
           G V+ +G  +S  LG  +          N  TP  V  L      V  I+        AH
Sbjct: 283 GGVWCWGRNDSGQLGDGSF--------TNRSTPGAVGGLP---SGVTAIAAG-----GAH 326

Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           T ALT SG ++ +G  D GQLG     + T+R  P  V
Sbjct: 327 TCALTSSGGVWCWGGNDSGQLGD---GSYTDRSTPGAV 361



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 16/255 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+ A+ S G V+ +G N+ GQLG G+  +   P  +  L    ++  AAG   T  
Sbjct: 526 AGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLP-SGVMAIAAGNYHTCA 584

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++ +  V+ +G +S G+   G   T   ++P  V  L +  V   A GN+ T  L+  G 
Sbjct: 585 LTGSDGVWCWGTNSDGQLGDGT--TTNRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSGG 641

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVY 227
           V+ + +    +LG  T  N   P    G +  +P  V  IAAG  +  AL        V+
Sbjct: 642 VWCWGYNLSGQLGDGTTTNRSTP----GAVSGLPSGVTAIAAGDEHTCALTGS---GGVW 694

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG G+ T+   P  +     L      +AAG +H   +   G V  WG   
Sbjct: 695 CWGDNYYGQLGDGTTTNRSTPGAVSG---LPSGVTAIAAGVYHTCALTGSGGVMCWGNNG 751

Query: 288 YGCLGHGNEECESVP 302
            G LG G     + P
Sbjct: 752 DGQLGDGRPLYRTTP 766



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 15/149 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+TS G V+ +G N SGQLG GTT     P  +  L  G+  I  AAG   T 
Sbjct: 628 AGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGDEHTC 685

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+ +G + +G+   G   T   ++P  V  L +  V   A G + T  L+  G
Sbjct: 686 ALTGSGGVWCWGDNYYGQLGDGT--TTNRSTPGAVSGLPS-GVTAIAAGVYHTCALTGSG 742

Query: 169 RVYTFSWGN--DARLG-----HHTEPNDV 190
            V    WGN  D +LG     + T P DV
Sbjct: 743 GV--MCWGNNGDGQLGDGRPLYRTTPVDV 769


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV   Q+  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
                N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGPTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSG 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 301 TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G VY +G N +GQLG G+   +  P  + +LQGIR+ + A G   T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVYA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY   
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSTHTSAAKTQGGHVYM-- 333

Query: 175 WG 176
           WG
Sbjct: 334 WG 335



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G    + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                 G G    N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 L-----GSG---GNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTM 108
           G  H++ +T +G VY++G+NS GQLG G    +  P P+  ++  RII+ AA      + 
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHTSA 323

Query: 109 LISDAGQVYAFGK 121
             +  G VY +G+
Sbjct: 324 AKTQGGHVYMWGQ 336


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 45/378 (11%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLISDAGQV 116
           TS+G++ ++GS S  +LG  + E++ +P P R  +     I   + G+  +  +++ G V
Sbjct: 540 TSRGLM-TWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDV 598

Query: 117 YAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           Y +G+ S         G         PQ VESL+ I V+  +IG + +A +   G + T+
Sbjct: 599 YMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVI--SIGFYHSAAVKSNGELLTW 656

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVG 230
             G D +LGH     DV   P+   +++I    V Q+  G  + +   C      V++ G
Sbjct: 657 GCGEDGQLGH----GDVFNQPIPKVVQSITSHWVTQVQCGEKHTI---CLTKNGKVFTWG 709

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG G       P L+      ++  + +A GA H AV+  +  V  +G G    
Sbjct: 710 TSEYGQLGLGDTQKNCTPMLVTSLDKYHI--IQIACGATHNAVLTNNREVLVFGNG--AA 765

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           +G  N    S+P +V +L  +    ++ G Y+T  ++E GDVY++G G+   LGH     
Sbjct: 766 MGSAN--IISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQE--LGH----- 816

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           G G   A+   P+LV +L+  N+ + QIS         H   LT+SGK+Y  G    GQL
Sbjct: 817 GHGTSEAH---PKLVETLR--NQSIRQISCGGR-----HMAFLTDSGKIYTSGKDPFGQL 866

Query: 411 GIELVNNQTERGNPERVD 428
           G    +   ++  P+++D
Sbjct: 867 G----HAAGDQNRPKKID 880



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 17/268 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS AV S G + ++G    GQLGHG    +  P+ ++S+    + Q   G   T+ ++  
Sbjct: 643 HSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKN 702

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G+V+ +G   +G  + G+  T+   +P LV SL    ++Q A G    AVL+    V  F
Sbjct: 703 GKVFTWGTSEYG--QLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVF 760

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGCG 232
             GN A +G     N +    ++ +L+ + + +++ G+    AL  C      VY+ G  
Sbjct: 761 --GNGAAMG---SANIISIPIMVPSLKIMNIERLSCGHYSTAALTECG----DVYTWGS- 810

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
            G +LGHG  T E HP+L+E  +  +++   ++ G  H A +   G++ T G   +G LG
Sbjct: 811 -GQELGHGHGTSEAHPKLVETLRNQSIRQ--ISCGGRHMAFLTDSGKIYTSGKDPFGQLG 867

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGD 320
           H   + ++ PK + +L     + ++ G+
Sbjct: 868 HAAGD-QNRPKKIDSLLKTTFMSISCGE 894



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 15/234 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H+I +T  G V+++G++  GQLG G T++   P  + SL    IIQ A GA 
Sbjct: 687 TQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGAT 746

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
              ++++  +V  FG  +       +    +++ P +V SLK + + + + G++ TA L+
Sbjct: 747 HNAVLTNNREVLVFGNGA------AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALT 800

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G VYT  WG+   LGH    ++  P  L+ TL N  + QI+ G  ++  L    SG  
Sbjct: 801 ECGDVYT--WGSGQELGHGHGTSEAHPK-LVETLRNQSIRQISCGGRHMAFLT--DSG-K 854

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           +Y+ G    G+LGH +  D+  P+ I+   LL    + ++ G  H A +    R
Sbjct: 855 IYTSGKDPFGQLGHAA-GDQNRPKKID--SLLKTTFMSISCGENHNAALFDTTR 905



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSS-----GQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           G  +S A+T  G VY +G  S        LG+GT +++  P+ + SLQ I +I  + G  
Sbjct: 585 GSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVI--SIGFY 642

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +   G++  +G    G+  +G    + +  P++V+S+ + +V Q   G   T  L+
Sbjct: 643 HSAAVKSNGELLTWGCGEDGQLGHGDVFNQPI--PKVVQSITSHWVTQVQCGEKHTICLT 700

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G+V+T+      +LG      +  P  L+ +L+   ++QIA G  +  A+      + 
Sbjct: 701 KNGKVFTWGTSEYGQLGLGDTQKNCTPM-LVTSLDKYHIIQIACGATHN-AVLTNNREVL 758

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+  G  +G      S      P ++   +++N++   ++ G +  A + + G V TWG 
Sbjct: 759 VFGNGAAMG------SANIISIPIMVPSLKIMNIE--RLSCGHYSTAALTECGDVYTWGS 810

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G+   LGHG+   E+ PK+V+ L +     ++ G      +++ G +Y+ G      LGH
Sbjct: 811 GQE--LGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGH 868

Query: 346 NAIADGQGNRHANV 359
              A G  NR   +
Sbjct: 869 ---AAGDQNRPKKI 879


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 11/291 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H++ +T  G V+S G+N SGQLGH    +  R + I  L      QAA GA  
Sbjct: 65  QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTK--RLQMIPGLDAFIFKQAACGASH 122

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +++ GQ++ +G ++ G+   G   T +  +P++V++L    VVQ A G   T  L+ 
Sbjct: 123 SVAVNNWGQLFCWGSNADGQLGLGTPLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTN 181

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALACQPSGMA 225
            G +Y +   +D +LG   +   +E  P L T L  IP+  IA G  +  ++    SG A
Sbjct: 182 NGELYAWGSNSDGQLGLGQDVK-IETRPKLITGLATIPIAFIACGGYH--SIVVSKSG-A 237

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+  G    G+LG    +D+  P L++   L N +   VA G   +  +  DG V T G 
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLK--TLRNAKVKYVACGEEFSVFLTMDGGVFTCGA 295

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
           G YG LGHG    E +P+ +  L       ++ G  +T  +V   G VY++
Sbjct: 296 GMYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 161/345 (46%), Gaps = 32/345 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y +GS   G+LG G  E+E    PR +   +   + Q A G   T+LI+  G+V++ G 
Sbjct: 28  MYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGN 87

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DA 179
           +  G+  +     +L    Q++  L      QAA G   +  ++  G++  F WG+  D 
Sbjct: 88  NDSGQLGHEKPTKRL----QMIPGLDAFIFKQAACGASHSVAVNNWGQL--FCWGSNADG 141

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           +LG  T         ++  L    VVQIA G  + LAL    +   +Y+ G    G+LG 
Sbjct: 142 QLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALT---NNGELYAWGSNSDGQLGL 198

Query: 240 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
           G     E  P+LI    L  +    +A G +H+ VV + G V  WG   +G LG  +   
Sbjct: 199 GQDVKIETRPKLITG--LATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISD 256

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
           + VP +++ L + K  +VA G+  +  ++ DG V++ G G    LGH A        ++N
Sbjct: 257 KYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGA--------NSN 308

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 402
            + P+ +  L  +   V QIS         HT AL  S GK+YA+
Sbjct: 309 EILPRQIIEL--MGSVVTQISCGKR-----HTLALVPSRGKVYAW 346



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 20/202 (9%)

Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWH 270
           + L L   P+   +Y  G  + G+LG G   DE    PR ++  +   ++ +  A G  H
Sbjct: 15  FHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQI--ACGETH 72

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             ++ +DG V + G    G LGH  E+     +++  L+       A G   +  V+  G
Sbjct: 73  TVLITKDGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWG 130

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            ++ +G      LG        G       TP++V +L      VVQI+         HT
Sbjct: 131 QLFCWGSNADGQLG-------LGTPLTIAHTPRMVKALG--TSIVVQIACGKK-----HT 176

Query: 391 FALTESGKLYAFGAGDKGQLGI 412
            ALT +G+LYA+G+   GQLG+
Sbjct: 177 LALTNNGELYAWGSNSDGQLGL 198



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HSI V+  G V+ +G N+ GQLG     +++ P  +++L+  ++   A G   ++ ++  
Sbjct: 228 HSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD 287

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
           G V+  G   +G+  +G    +++  P+ +  L    V Q + G   T A++   G+VY 
Sbjct: 288 GGVFTCGAGMYGQLGHGANSNEIL--PRQIIELMGSVVTQISCGKRHTLALVPSRGKVYA 345

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
           +  G   +LG  T  +   P  +LG
Sbjct: 346 WGLGGSGQLGSQTARSVATPQMVLG 370



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G    G+LGH   T  K  ++I        +    A GA H+  V   G++  WG 
Sbjct: 82  VFSCGNNDSGQLGHEKPT--KRLQMIPGLDAFIFKQA--ACGASHSVAVNNWGQLFCWGS 137

Query: 286 GRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G LG G        P++V+AL     + +A G   T  ++ +G++Y++G      LG
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLG 197

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                 GQ  +      P+L+T L  +    +            H+  +++SG ++ +G 
Sbjct: 198 L-----GQDVKIET--RPKLITGLATIPIAFIACG-------GYHSIVVSKSGAVFGWGR 243

Query: 405 GDKGQLGIELVNNQ 418
              GQLG+  ++++
Sbjct: 244 NTFGQLGMNDISDK 257


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL   +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
            + +   G     LV   Q+  +L N  V++ A G++ + VL+ +G VY + + N  ++G
Sbjct: 103 GYTQLGNGTTNHGLVPC-QVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 162 SGSTANQAIPRRVTGCLQNKVVVNIACG--QMCSVAVVDTG-EVYVWGYNGNGQLGLGSS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 277 TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 127/244 (52%), Gaps = 18/244 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H I  T++G V+++G N   QLG+GTT     P  + + L   ++I+ A G+  ++
Sbjct: 83  SGP-HIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSL 141

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VYA+G ++ G+   G    + +  P+ V   L+N  VV  A G   +  +   
Sbjct: 142 VLTSDGEVYAWGYNNSGQVGSGSTANQAI--PRRVTGCLQNKVVVNIACGQMCSVAVVDT 199

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A G+ + L L  +     V
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQ---V 254

Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTW 283
           Y+ G    G+LG G+++++ +P   ++E+ +++     + A  + H +A   Q G V  W
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE----IAACHSTHTSAAKTQGGHVYMW 310

Query: 284 GWGR 287
           G  R
Sbjct: 311 GQCR 314



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 127 NKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNI 186

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   ++ + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 187 ACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGFAH 244

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 291



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 17/185 (9%)

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG+G+      P  +    L N Q + VA G++H+ V+  DG V  WG+   G +G G+
Sbjct: 106 QLGNGTTNHGLVPCQVST-NLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS 164

Query: 296 EECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
              +++P+ V   L +   +++A G   +  V + G+VY +G   +  LG  +     GN
Sbjct: 165 TANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS----SGN 220

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
           +     TP  V +L+ +  + V           AHT  LT+ G++YA+GA   GQLG   
Sbjct: 221 QP----TPCRVAALQGIRVQRVACGF-------AHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 415 VNNQT 419
            +NQ+
Sbjct: 270 KSNQS 274


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 174/390 (44%), Gaps = 43/390 (11%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAA 101
           E S   AG  HS+A+ + G V+++G NS   LG G  E    P P++   L G+R +  A
Sbjct: 478 EASLVAAGKTHSLALLADGTVWAWGDNSFSALGLG-DEPGASPTPVQVPKLAGVRSL--A 534

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG   ++ +   G V A+G   FG  + G +   +   P+ +  L  I  V  A+G++++
Sbjct: 535 AGENSSLAVLANGTVMAWGYGLFG--QLGSESASIFQIPEPIFGLSGITAV--AMGHWYS 590

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
             L  +G V+++ +    +LG  T      P  + G  +   V  IAAG  + LAL    
Sbjct: 591 LALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQ---VTAIAAGASHALALRADG 647

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           +   V++ G    G LG G++T    P  ++    +    + VAAG +H+  + +DG V 
Sbjct: 648 T---VWAWGSNALGTLGDGTQTSRSTPVQVQGLTGV----IAVAAGEYHSLALREDGTVW 700

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           +WG    G LG         P  V  L  V+   +A G+       E G + +FG   S 
Sbjct: 701 SWGNNNEGQLGDVTASSRQSPGQVPGLAGVQ--RIAAGEKHALAAVEGGPLVAFGKNTSG 758

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            L       G G R  N    + + SL+  N R +   +       AHT A+   G ++A
Sbjct: 759 QL-------GLGERKENQSRGE-IASLR--NPRGIAAGI-------AHTLAVAADGTVWA 801

Query: 402 FGAGDKGQLGIELVNNQTERGNPERVDIDL 431
           +GA   GQLG     N     +P+ + + L
Sbjct: 802 WGANATGQLG-----NGEAANSPQPITVKL 826



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 167/418 (39%), Gaps = 82/418 (19%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA------------- 100
           +++A+   G V S+G+N SGQLG GT      P P+  L G+  + A             
Sbjct: 388 YAVALMGDGTVRSWGNNDSGQLGDGTYIRH-TPTPVPGLTGVTAVSAGEDHVVAVLSDGS 446

Query: 101 ------------------------------------AAGAGRTMLISDAGQVYAFGKDSF 124
                                               AAG   ++ +   G V+A+G +SF
Sbjct: 447 PRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGDNSF 506

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
             +  G+ G +   SP  V+  K   V   A G   +  +   G V  + +G   +LG  
Sbjct: 507 --SALGL-GDEPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQLGSE 563

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
           +      P P+ G L  I    +A G+ Y LAL    +   V+S G    G+LG G+ TD
Sbjct: 564 SASIFQIPEPIFG-LSGI--TAVAMGHWYSLALREDGT---VWSWGYNASGQLGDGT-TD 616

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           E+ PR  +   L   Q   +AAGA HA  +  DG V  WG    G LG G +   S P  
Sbjct: 617 ER-PRPGQVAGLT--QVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQ 673

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           VQ L  V  I VA G+Y +  + EDG V+S+G      LG    +  Q        +P  
Sbjct: 674 VQGLTGV--IAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQ--------SPGQ 723

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
           V  L  V +R+             H  A  E G L AFG    GQLG+        RG
Sbjct: 724 VPGLAGV-QRIAAG--------EKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRG 772



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 175/475 (36%), Gaps = 129/475 (27%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--------------------------- 82
           AG  H++A+ + G V+++GSN +GQLG GT                              
Sbjct: 182 AGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAGYSSLALR 241

Query: 83  ---------------------EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
                                E R  P++ L  +R+   AAG G ++ +   G V A+G 
Sbjct: 242 KDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGA 301

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           + +G  + G  G  L  +P+ V   K   VV  A     +  +  +G V ++    D  L
Sbjct: 302 NIYG--QLGDGGFSLEGNPRPVAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGSNVDGAL 359

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G     N   P  + G  +   V  ++ G  Y +AL    +   V S G    G+LG G+
Sbjct: 360 GVEQRSNSRVPSKVFGLTD---VATVSVGGYYAVALMGDGT---VRSWGNNDSGQLGDGT 413

Query: 242 ------------------RTDEKH---------PRLIEQFQLLNL----------QPV-- 262
                                E H         PR+    Q + L           PV  
Sbjct: 414 YIRHTPTPVPGLTGVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQV 473

Query: 263 -------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
                  +VAAG  H+  +  DG V  WG   +  LG G+E   S P  VQ         
Sbjct: 474 PGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPGAS-PTPVQVPKLAGVRS 532

Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
           +A G+ ++  V  +G V ++G G    LG  +                   S+ Q+ E +
Sbjct: 533 LAAGENSSLAVLANGTVMAWGYGLFGQLGSES------------------ASIFQIPEPI 574

Query: 376 VQISLTNSI---YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             +S   ++   +W  ++ AL E G ++++G    GQLG    +   ER  P +V
Sbjct: 575 FGLSGITAVAMGHW--YSLALREDGTVWSWGYNASGQLGDGTTD---ERPRPGQV 624



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT 185
           E+G+   +     + V  L ++  V A  GN     L  +G V+  +WG++   +LG  T
Sbjct: 156 EWGLSYLRFDGGVRPVPGLTDVRAVSA--GNEHALALRTDGTVW--AWGSNFAGQLGDGT 211

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
           + +   P  ++G  E I V   AAGY    +LA +  G  V++ G    G+LG G+    
Sbjct: 212 KTSRSTPVQVVGLTEVIAVS--AAGYS---SLALRKDGT-VWAWGDNESGQLGDGTMEGR 265

Query: 246 KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
             P      Q+L+L  V  +AAG  H+  V  DG V  WG   YG LG G    E  P+ 
Sbjct: 266 LTP-----VQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRP 320

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           V        + VA     +F V  DG V S+G     +LG          + +N   P  
Sbjct: 321 VAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGV--------EQRSNSRVPSK 372

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V  L  V    V            +  AL   G + ++G  D GQLG
Sbjct: 373 VFGLTDVATVSVG---------GYYAVALMGDGTVRSWGNNDSGQLG 410



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 37/264 (14%)

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           A G + + ++  +G V    WG    L +      V P P L       V  ++AG  + 
Sbjct: 139 AAGRYHSLMVRPDGTV--LEWG----LSYLRFDGGVRPVPGL-----TDVRAVSAGNEHA 187

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
           LAL    +   V++ G    G+LG G++T    P      Q++ L  V+ V+A  + +  
Sbjct: 188 LALRTDGT---VWAWGSNFAGQLGDGTKTSRSTP-----VQVVGLTEVIAVSAAGYSSLA 239

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           + +DG V  WG    G LG G  E    P  VQ L+ V+   +A G   +  V  DG V 
Sbjct: 240 LRKDGTVWAWGDNESGQLGDGTMEGRLTP--VQVLDLVRVTGLAAGRGHSLAVLADGTVR 297

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G      LG    +  +GN       P  V+ L  V    V ++ + S+     +FA+
Sbjct: 298 AWGANIYGQLGDGGFSL-EGNPR-----PVAVSKLTDV----VSVAASTSL-----SFAV 342

Query: 394 TESGKLYAFGAGDKGQLGIELVNN 417
              G + ++G+   G LG+E  +N
Sbjct: 343 HSDGTVSSWGSNVDGALGVEQRSN 366



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 78/208 (37%), Gaps = 64/208 (30%)

Query: 264 VAAGAWHAAVVGQDGRVCTWG--------------------------------------- 284
           VAAG +H+ +V  DG V  WG                                       
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYLRFDGGVRPVPGLTDVRAVSAGNEHALALRTDGTVW 197

Query: 285 -WGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WG    G LG G +   S P  V  L +V A+  A   Y++  + +DG V+++G  ES 
Sbjct: 198 AWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAA--GYSSLALRKDGTVWAWGDNESG 255

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LG   + +G+       LTP  V  L +V         T       H+ A+   G + A
Sbjct: 256 QLGDGTM-EGR-------LTPVQVLDLVRV---------TGLAAGRGHSLAVLADGTVRA 298

Query: 402 FGAGDKGQLGIELVNNQTERGNPERVDI 429
           +GA   GQLG       +  GNP  V +
Sbjct: 299 WGANIYGQLGD---GGFSLEGNPRPVAV 323



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 37  GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
           GE    R      AG  H++AV + G V+++G+N++GQLG+G  E    P+PI
Sbjct: 772 GEIASLRNPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNG--EAANSPQPI 822


>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
           magnipapillata]
          Length = 441

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 36/358 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           Q   G  H+I V+  G VYS+G N  G LG    GT  EE+ PR +   QGIR++ A+AG
Sbjct: 76  QVTCGGMHTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAG 135

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-----NIFVVQAAIGN 158
              +  ++D G+V+A+G       + G+    +    ++++        +   V+   GN
Sbjct: 136 DSHSAALTDDGRVFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGN 195

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLLGTLENIPVVQI 207
             T +L+ EG +YT   G   +LG   E              + P  +    +       
Sbjct: 196 DHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIF 255

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---VVV 264
           A  +C     A       VY+ G    G+LG G+  +  +P +I+    +       + +
Sbjct: 256 AGSFC---TFALSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQI 312

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTT 323
             G  H+ V   +G+  + G   YG LG G +  E S+PK + +L     + +A G+  +
Sbjct: 313 HGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIACGEAVS 372

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS--LKQVNERVVQIS 379
           F V++ G +YS+G G S  LG   + D +     ++  P LV S  L    + V+ +S
Sbjct: 373 FAVTDKGHLYSWGLGTSLQLG---VGDDE-----DIFDPSLVQSNNLTLAQDEVLAVS 422



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 176/385 (45%), Gaps = 54/385 (14%)

Query: 58  VTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           V   G + + G    GQLG G    E  RP  I+ ++G+  IQ   G   T+ +S+ G+V
Sbjct: 34  VQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGEV 93

Query: 117 YAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           Y++G     + G    G  G + +  P+ V   + I VV A+ G+  +A L+ +GRV  F
Sbjct: 94  YSWGCNDDGALGRPTEGTDGEEFI--PRKVLLPQGIRVVYASAGDSHSAALTDDGRV--F 149

Query: 174 SWG-----------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +WG             A +G   E   + P    G   + P V++ +G  + + L  +  
Sbjct: 150 AWGAYRDASGQIGLTAASIGKKNEVIKIYPK---GDQIDDPAVKVVSGNDHTVILTSE-- 204

Query: 223 GMAVYSVGCGLGGKLGH-----GSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAV 273
           G+ +Y+ G G  G+LG      G R   +   +I   Q++  +       + AG++    
Sbjct: 205 GL-IYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFA 263

Query: 274 VGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA-----IHVATGDYTTFVVS 327
           + +D   V  WG   YG LG G  E    P+V+Q+L++++      + +  G + + V  
Sbjct: 264 LSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVAD 323

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
            +G  YS G  E   L       G G        P+ + SL++  E VV+I+   ++   
Sbjct: 324 GNGKTYSIGRSEYGRL-------GLGKDAKETSLPKKIDSLEK--ENVVKIACGEAV--- 371

Query: 388 AHTFALTESGKLYAFGAGDKGQLGI 412
             +FA+T+ G LY++G G   QLG+
Sbjct: 372 --SFAVTDKGHLYSWGLGTSLQLGV 394



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 36/268 (13%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++ + G + T   G+  +LG      + +   ++  +E +  +Q+  G  + + ++    
Sbjct: 33  LVQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGE 92

Query: 223 GMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              VYS GC   G LG    G+  +E  PR +   Q   ++ V  +AG  H+A +  DGR
Sbjct: 93  ---VYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQ--GIRVVYASAGDSHSAALTDDGR 147

Query: 280 VCTWGWGR---------YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           V  WG  R            +G  NE  +  PK  Q   D  A+ V +G+  T +++ +G
Sbjct: 148 VFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQI--DDPAVKVVSGNDHTVILTSEG 205

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHAN-----VLTPQLVTSLKQVNERVVQISLTNSIY 385
            +Y+ G GE   LG   I +  G+R        +L+PQ+V        R  +    + I+
Sbjct: 206 LIYTSGTGEQGQLGR--IKECFGHRGGRRGLEIILSPQVV--------RFRKKQFFSDIF 255

Query: 386 WNAH-TFALT-ESGKLYAFGAGDKGQLG 411
             +  TFAL+ ++  +YA+G  + GQLG
Sbjct: 256 AGSFCTFALSRDTNDVYAWGLNNYGQLG 283



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 24/247 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-----------EEEWRPRPIRSLQGI 95
           + ++G  H++ +TS+G++Y+ G+   GQLG               E    P+ +R  +  
Sbjct: 190 KVVSGNDHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQ 249

Query: 96  RIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF---- 150
                 AG+  T  +S D   VYA+G +++G+   G   T+   +P++++SL  I     
Sbjct: 250 FFSDIFAGSFCTFALSRDTNDVYAWGLNNYGQLGSGT--TENFFNPEVIQSLSEIREHAN 307

Query: 151 -VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
             +Q   G   + V    G+ Y+       RLG   +  +      + +LE   VV+IA 
Sbjct: 308 GYLQIHGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIAC 367

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAG 267
           G     A+  +     +YS G G   +LG G   D   P L++   L   Q  V  V+AG
Sbjct: 368 GEAVSFAVTDKGH---LYSWGLGTSLQLGVGDDEDIFDPSLVQSNNLTLAQDEVLAVSAG 424

Query: 268 AWHAAVV 274
             H A++
Sbjct: 425 GQHTAIL 431



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
           +V + G + T G G  G LG G    E   P +++ +  V  I V  G   T  VSE G+
Sbjct: 33  LVQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGE 92

Query: 332 VYSFGCGESASLGH-NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           VYS+GC +  +LG      DG+      VL PQ +        RVV  S  +S     H+
Sbjct: 93  VYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGI--------RVVYASAGDS-----HS 139

Query: 391 FALTESGKLYAFGA--GDKGQLGI 412
            ALT+ G+++A+GA     GQ+G+
Sbjct: 140 AALTDDGRVFAWGAYRDASGQIGL 163


>gi|406602412|emb|CCH46028.1| Regulator of chromosome condensation [Wickerhamomyces ciferrii]
          Length = 476

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 180/405 (44%), Gaps = 76/405 (18%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHG---TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           A T +  ++ FGS S  +LG G     +E  RPR    L+   I+  A G   T+ + D 
Sbjct: 43  AKTQQLDIFVFGSGSMCELGLGPAAKNKEVKRPRLNPYLKDKGIVDFAVGGMHTLALDDK 102

Query: 114 GQVYAFGKDSFGEAEYGVQGTK---------------------LVTSPQLVESL-KNIFV 151
            QV+++G +  G         K                       ++P LVE L K++ V
Sbjct: 103 NQVWSWGGNDSGVLGRDTSKVKEQLKDMDDAGSDDDEDGDLNEAESTPGLVEGLPKDLKV 162

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIP-VVQ 206
           VQ A  +  +AVL   G VY  +WG    N+  LG     ND+        ++    + Q
Sbjct: 163 VQLAATDNLSAVLLENGEVY--AWGTFRCNEGILGFK---NDITKQSTPVKIDEFKEITQ 217

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----- 261
           +A+G  ++L L  +     V++ G G   +LG          R+ E+ +L  L+P     
Sbjct: 218 LASGKDHILGLDTKG---VVFAWGNGQQLQLGR---------RISERNKLKTLEPREFGL 265

Query: 262 ---VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAI 314
              V +++G +H   + +DG+V TWG  +YG  G  +E  +    SVP  V+ L D K +
Sbjct: 266 ADVVYISSGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIV 325

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLG-------HNAIADGQGNRHANVLTPQLVTS 367
            +A G++ T  +SEDG VY+FG  +   +G        +   D  GN  + V  P  + +
Sbjct: 326 QIAAGEHHTLALSEDGSVYAFGRIDMFEIGIAKKDLPESTFRDVHGNARS-VPVPTKIPN 384

Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           L +           N    + H+ A+TE G ++A+G G+   +G+
Sbjct: 385 LPKTR---------NIAVGSHHSLAITEDGVVFAWGFGETYAIGL 420



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAA 101
           +E +Q  +G  H + + +KGVV+++G+    QLG   +E  + +    R      ++  +
Sbjct: 213 KEITQLASGKDHILGLDTKGVVFAWGNGQQLQLGRRISERNKLKTLEPREFGLADVVYIS 272

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           +G      I+  G+V  +G + +G+      ++   L++ P  VE L +  +VQ A G  
Sbjct: 273 SGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIVQIAAGEH 332

Query: 160 FTAVLSREGRVYTF 173
            T  LS +G VY F
Sbjct: 333 HTLALSEDGSVYAF 346



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 24/161 (14%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAAGAG 105
           +G  H  A+T  G V ++G N  GQ G  +  E+      P  +  L   +I+Q AAG  
Sbjct: 273 SGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIVQIAAGEH 332

Query: 106 RTMLISDAGQVYAFGK-DSFGEAEYGVQGTKL--------------VTSPQLVESLKNIF 150
            T+ +S+ G VYAFG+ D F   E G+    L              V  P  + +L    
Sbjct: 333 HTLALSEDGSVYAFGRIDMF---EIGIAKKDLPESTFRDVHGNARSVPVPTKIPNLPKTR 389

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
            +  A+G+  +  ++ +G V+ + +G    +G      DVE
Sbjct: 390 NI--AVGSHHSLAITEDGVVFAWGFGETYAIGLGPAGEDVE 428


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 31/373 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS+A+ S G +Y++G NSSGQLG+ +      P  + +  G+   Q +AGA 
Sbjct: 52  TQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGAD 111

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTA 162
            ++ +   G  YA+G+++ G    G      V  P LV +      + + Q   G F + 
Sbjct: 112 HSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSV--PLLVSAGAVPSGVTISQVMAGGFHSL 169

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAGYCYLLALA 218
            +   G +Y++ +    +LG  T        PL  +   +P      Q++AG  + LA+ 
Sbjct: 170 AVGSNGDIYSWGYNRSGQLGDGTTL--ASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIG 227

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
                   Y+ G   GG+LG GS +    P L+     ++     V+AG  H+  VG DG
Sbjct: 228 SNGK---TYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQ--VSAGDLHSLAVGSDG 282

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
           +   WG    G LG+        P +V  +  +    V+ G   +  +  DG+ Y++G  
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLN 342

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
            +  LG+N I             P +VT+   V    ++           H+        
Sbjct: 343 VNGQLGNNTITTST--------VPVMVTAPDGVTFTRIEAG-------GLHSLTAASDEN 387

Query: 399 LYAFGAGDKGQLG 411
            Y +GA   GQLG
Sbjct: 388 TYTWGANSFGQLG 400



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 15/266 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS---LQGIRIIQAAA 102
           SQ +AG  HS+AV S G +YS+G N SGQLG GTT     P  + +     G+   Q +A
Sbjct: 159 SQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   ++ I   G+ YA+G+   G+   G+       +P LV +   +   Q + G+  + 
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQ--LGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSL 276

Query: 163 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            +  +G+ Y  +WGN+   +LG+ T  + + P  L+  +  + V Q++AG  + LA+   
Sbjct: 277 AVGSDGKAY--AWGNNDSGQLGNATTTSSLAPV-LVSPMGGLAVTQVSAGADHSLAIGAD 333

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            +    Y+ G  + G+LG+ + T    P ++     +    +   AG  H+     D   
Sbjct: 334 GN---AYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRI--EAGGLHSLTAASDENT 388

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQ 306
            TWG   +G LG+G  +   VP  + 
Sbjct: 389 YTWGANSFGQLGNGTSDGSLVPVAIS 414



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 139/333 (41%), Gaps = 27/333 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           L G+   Q +AG   ++ +   G +YA+G +S G  + G       + P LV +   +  
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSG--QLGNNSILNSSVPVLVSTPDGVTF 103

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQI 207
            Q + G   +  +  +G  Y +    D RLG+ T        PLL +   +P    + Q+
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTG--SSVPLLVSAGAVPSGVTISQV 161

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAA 266
            AG  + LA+        +YS G    G+LG G+      P  +    +   +    V+A
Sbjct: 162 MAGGFHSLAVGSNGD---IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G  H+  +G +G+   WG  R G LG G+      P +V A   V    V+ GD  +  V
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAV 278

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             DG  Y++G  +S  LG+            + L P LV+ +  +   V Q+S       
Sbjct: 279 GSDGKAYAWGNNDSGQLGNATT--------TSSLAPVLVSPMGGL--AVTQVSAGAD--- 325

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
             H+ A+   G  YA+G    GQLG   +   T
Sbjct: 326 --HSLAIGADGNAYAWGLNVNGQLGNNTITTST 356



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 145/335 (43%), Gaps = 24/335 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS---LQGIRIIQAAA 102
           +Q  AG  HS+AV S G  Y++G N+ G+LG+GT+     P  + +     G+ I Q  A
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMA 163

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIGN 158
           G   ++ +   G +Y++G +  G+      GT L +S  L  S       +   Q + G+
Sbjct: 164 GGFHSLAVGSNGDIYSWGYNRSGQLG---DGTTLASSVPLKVSAGAVPAGVTFSQVSAGD 220

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             +  +   G+ Y +      +LG  +      P  L+     +   Q++AG  + LA+ 
Sbjct: 221 RHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPA-LVSAPAGVSFTQVSAGDLHSLAVG 279

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
               G A Y+ G    G+LG+ + T    P L+     L +  V  +AGA H+  +G DG
Sbjct: 280 SD--GKA-YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQV--SAGADHSLAIGADG 334

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
               WG    G LG+      +VP +V A + V    +  G   +   + D + Y++G  
Sbjct: 335 NAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGAN 394

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
               LG N  +DG        L P  ++    + E
Sbjct: 395 SFGQLG-NGTSDGS-------LVPVAISRFPVITE 421



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 20/219 (9%)

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
           G L  +   Q++AG  + LA+    +   +Y+ G    G+LG+ S  +   P L+     
Sbjct: 44  GVLPGVVFTQVSAGINHSLAMGSDGN---IYAWGYNSSGQLGNNSILNSSVPVLVSTPDG 100

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA---LNDVKA 313
           +    V  +AGA H+  VG DG    WG    G LG+G     SVP +V A    + V  
Sbjct: 101 VTFTQV--SAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTI 158

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
             V  G + +  V  +GD+YS+G   S  LG        G   A+ +  ++         
Sbjct: 159 SQVMAGGFHSLAVGSNGDIYSWGYNRSGQLG-------DGTTLASSVPLKVSAGAVPAGV 211

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              Q+S  +      H+ A+  +GK YA+G    GQLGI
Sbjct: 212 TFSQVSAGDR-----HSLAIGSNGKTYAWGEARGGQLGI 245


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 167/355 (47%), Gaps = 28/355 (7%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSF 124
           +G ++ GQLG+G + +     P      +   + + A G   T+ + + GQVY+ G +  
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63

Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
           G+  +  +GT     P  V +L    +   A G   +  LS +G +Y++  GND +LGH 
Sbjct: 64  GQLGHSHEGTH----PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA 119

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RT 243
           T  +      ++  L    + Q++ G  + LAL        +++ G    G+LG G+   
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALG---DDGQLFTWGQNTHGQLGLGNGFI 176

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
            +  P+ ++  + + L  V   AG  H+  +   G V  WG    G LG  +E+ +  P 
Sbjct: 177 SQSSPQKVKSLEGIPLAQV--TAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPC 234

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V+ L   K ++++ G+  T ++++ G +++FG G S  LGH+++         N + P+
Sbjct: 235 HVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSL--------HNEINPR 286

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNN 417
            V  L+ +   V QI+         HT A    SG LYAFG GD GQLG    NN
Sbjct: 287 RV--LELMGSEVSQIACGRK-----HTLAFVPSSGTLYAFGCGDLGQLGTGHENN 334



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 146/314 (46%), Gaps = 28/314 (8%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +  +G  +FG+   G      V+ P          V + A G   T  L  +G+VY+  W
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
             + +LGH  E     P   + TL    +  IA G  + LAL+ Q +   +YS G G  G
Sbjct: 61  NGEGQLGHSHEGTHPAP---VATLAEEHIKHIACGQSHSLALSLQGN---LYSWGAGNDG 114

Query: 236 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           +LGH +     + PR+I++     +Q +  + G  H   +G DG++ TWG   +G LG G
Sbjct: 115 QLGHATVEHYSRIPRIIKKLSQQKIQQM--SCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172

Query: 295 NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           N    +S P+ V++L  +    V  G   +F +S  G V+ +G   +  LG N   D Q 
Sbjct: 173 NGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLN---DEQV 229

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                  TP  V  L+    +VV IS         HT  LT++G L+ FGAG  GQLG +
Sbjct: 230 KE-----TPCHVKPLR--THKVVYISCGEE-----HTAILTKAGGLFTFGAGGSGQLGHD 277

Query: 414 LVNNQTERGNPERV 427
            ++N+    NP RV
Sbjct: 278 SLHNEI---NPRRV 288



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 24/278 (8%)

Query: 39  ACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIR 96
           A    E+ + IA G  HS+A++ +G +YS+G+ + GQLGH T E   R PR I+ L   +
Sbjct: 79  ATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQK 138

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           I Q + G    + + D GQ++ +G+++ G+   G  G    +SPQ V+SL+ I + Q   
Sbjct: 139 IQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG-NGFISQSSPQKVKSLEGIPLAQVTA 197

Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-----PNDVEPHPLLGTLENIPVVQIAA 209
           G   +  LS  G V  F WG ++  +LG + E     P  V+P      L    VV I+ 
Sbjct: 198 GGSHSFALSLSGAV--FGWGKNSAGQLGLNDEQVKETPCHVKP------LRTHKVVYISC 249

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  +  A+  +  G+  ++ G G  G+LGH S  +E +PR +   +L+  +   +A G  
Sbjct: 250 GEEH-TAILTKAGGL--FTFGAGGSGQLGHDSLHNEINPRRV--LELMGSEVSQIACGRK 304

Query: 270 HA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           H  A V   G +  +G G  G LG G+E     P VV+
Sbjct: 305 HTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 147/314 (46%), Gaps = 26/314 (8%)

Query: 39  ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           A C +E      G  H++ +   G VYS G N  GQLGH  + E   P P+ +L    I 
Sbjct: 33  ATCVKE---VACGGKHTLFLMEDGQVYSCGWNGEGQLGH--SHEGTHPAPVATLAEEHIK 87

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIG 157
             A G   ++ +S  G +Y++G  + G+  +  V+    +  P++++ L    + Q + G
Sbjct: 88  HIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRI--PRIIKKLSQQKIQQMSCG 145

Query: 158 NFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           +     L  +G+++T+      +LG        + P  V+      +LE IP+ Q+ AG 
Sbjct: 146 DDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVK------SLEGIPLAQVTAGG 199

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            +  AL+   SG AV+  G    G+LG      ++ P  ++   L   + V ++ G  H 
Sbjct: 200 SHSFALSL--SG-AVFGWGKNSAGQLGLNDEQVKETPCHVK--PLRTHKVVYISCGEEHT 254

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDG 330
           A++ + G + T+G G  G LGH +   E  P+ V  L   +   +A G  +T   V   G
Sbjct: 255 AILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSG 314

Query: 331 DVYSFGCGESASLG 344
            +Y+FGCG+   LG
Sbjct: 315 TLYAFGCGDLGQLG 328


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L +I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL +I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 20/225 (8%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    +   V S G    G+LG       + P  I+  + L +   +
Sbjct: 25  LLQAASGERHSLLLL---TNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVD--L 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG G  G LG G  +E    PK +  LND+K I V+ G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +S+D  V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SLALSKDSQVFSWGKNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                AH+FAL+  G  + +G+   GQL +   N   +   P  V
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L +++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  V +LK +   VV IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            AHT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326


>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
 gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
          Length = 423

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           A+ G    ++++    +Y+ GK S+G      +   L   P+ +E+LKN  ++  + G  
Sbjct: 81  ASLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYE 140

Query: 160 FTAVLSREGRVYTFSWGNDAR---------------LGHHTEPNDVEPHPLLGTLENIPV 204
            + V + +G    FSWG   +               + + ++P  ++      T  NI  
Sbjct: 141 HSIVTTDKG---LFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSD--STFRNIK- 194

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPV 262
            ++ +G  + L L    +   VYS G G  G  G G + +   P  I QF  +L N   +
Sbjct: 195 -KVCSGSDHSLVLNKDGT---VYSWGHGYFGATGLGKKDNVATPTKI-QFNKELENKLVL 249

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIH-VATG 319
            +A G +H+ ++  D  + ++GWG YG LGH   + ++   PK ++++N    I  V  G
Sbjct: 250 DIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFAG 309

Query: 320 DY-TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
            + T+F V E GDVYS+G GE  +LG     D Q     NV  P  V SL  + +     
Sbjct: 310 SHATSFYVDEKGDVYSWGWGEGGTLG---FGDNQ-----NVYVPTQVKSLSNIKKIAAGF 361

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                     HT ALT   ++Y FG    GQLG
Sbjct: 362 ---------KHTLALTNDNQVYVFGDNTFGQLG 385



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 148/321 (46%), Gaps = 25/321 (7%)

Query: 56  IAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           + +T    +YS G  S G LG      + E  P+ I +L+   II  ++G   +++ +D 
Sbjct: 89  LMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDK 148

Query: 114 GQVYAFGKDSFGEAEYGVQGTKL------VTSPQLVESLKNIF--VVQAAIGNFFTAVLS 165
           G ++++G+   G+   G   +++       + PQ +++  + F  + +   G+  + VL+
Sbjct: 149 G-LFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLN 207

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLALACQPSG 223
           ++G VY++  G     G   + N   P  +     LEN  V+ IA G  + L L    S 
Sbjct: 208 KDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILT---SD 264

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
             +YS G G  G+LGH S  D K+   P+ IE          V A     +  V + G V
Sbjct: 265 NEIYSFGWGEYGQLGH-SENDTKNYYSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDV 323

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            +WGWG  G LG G+ +   VP  V++L+++K I  A G   T  ++ D  VY FG    
Sbjct: 324 YSWGWGEGGTLGFGDNQNVYVPTQVKSLSNIKKI--AAGFKHTLALTNDNQVYVFGDNTF 381

Query: 341 ASLG---HNAIADGQGNRHAN 358
             LG   +N   D Q +   +
Sbjct: 382 GQLGSKQNNVFEDPQNDNQDD 402



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 11/210 (5%)

Query: 34  LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI---R 90
            +       R   +  +G  HS+ +   G VYS+G    G  G G  +    P  I   +
Sbjct: 182 FIKNSDSTFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNK 241

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
            L+   ++  A G   +++++   ++Y+FG   +G+  +    TK   SP+ +ES+ +  
Sbjct: 242 ELENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSST 301

Query: 151 VVQAAI-GNFFTAV-LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
            +++   G+  T+  +  +G VY++ WG    LG     N   P   + +L NI   +IA
Sbjct: 302 KIKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVP-TQVKSLSNIK--KIA 358

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
           AG+ + LAL        VY  G    G+LG
Sbjct: 359 AGFKHTLALTNDN---QVYVFGDNTFGQLG 385


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L +I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL +I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 20/225 (8%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    +   V S G    G+LG       + P  I+  + L +   +
Sbjct: 25  LLQAASGERHSLLLL---TNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVD--L 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG G  G LG G  +E    PK +  LND+K I V+ G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +S+D  V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SLALSKDSQVFSWGKNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                AH+FAL+  G  + +G+   GQL +   N   +   P  V
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L +++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  V +LK +   VV IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            AHT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 29/377 (7%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRIIQAAAGAGRTM 108
            G  H  A+T  G VY++G N SG+LGHG      +  P+ +   +   + +   G   T+
Sbjct: 883  GWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTL 942

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
              +++G VY +G    G+   G +    +  P  +++L+ + V Q A G   T V+ + G
Sbjct: 943  ARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP--IKTLRKMHVTQLAAGYAHTIVVLKSG 1000

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVY 227
             V  F  G   +LG     + + P      L+ +P +VQ A GYC+   L        VY
Sbjct: 1001 EVMVFGGGEVGQLGTGMRKDLLVP----TKLQAMPSIVQAACGYCHTALLT---EAGEVY 1053

Query: 228  SVGCGLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            + G  + G+LGH    + D   P+++E      ++   +A G++H   +     V TWG 
Sbjct: 1054 TCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIR--FIACGSFHTIAITDLDNVYTWG- 1110

Query: 286  GRYGCLGHGNEECES--------VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
            G  G    G    E          P +V+ L   +   V+ G   +   + DG+VY +  
Sbjct: 1111 GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVW-- 1168

Query: 338  GESASLGHNAIADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
              + SL    +  G G   A+  T  P LV+++    +   +  + ++      T  +TE
Sbjct: 1169 SSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTE 1228

Query: 396  SGKLYAFGAGDKGQLGI 412
            +G LY++G+G  GQLG+
Sbjct: 1229 NGLLYSWGSGAFGQLGL 1245



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 155/332 (46%), Gaps = 36/332 (10%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            + + G  H++A T  G VY +G+   GQLG G     W P PI++L+ + + Q AAG   
Sbjct: 933  EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAH 992

Query: 107  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
            T+++  +G+V  FG    G+   G++   LV  P  ++++ +I  VQAA G   TA+L+ 
Sbjct: 993  TIVVLKSGEVMVFGGGEVGQLGTGMRKDLLV--PTKLQAMPSI--VQAACGYCHTALLTE 1048

Query: 167  EGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G VYT       +LGH     ND     ++  L    +  IA G  + +A+    +   
Sbjct: 1049 AGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDN--- 1105

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------LLNLQPVVVAAGAWHAAVVGQDGR 279
            VY+ G G+ G    G+   E+   ++++        L+  +  +V+ G  H+     DG 
Sbjct: 1106 VYTWG-GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGE 1164

Query: 280  VCTWGWG---------RYGCLGHGNEECESVPKVVQALND-----VKAI--HVATGDYTT 323
            V  W            R   L   +   E+ P +V A+ D      K +  H A G+  T
Sbjct: 1165 VYVWSSTGSLQPPLLLRGSGLSTASGTTEA-PLLVSAIPDGQDAKSKPVVKHAAAGEEFT 1223

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
             VV+E+G +YS+G G    LG   + D QG+R
Sbjct: 1224 LVVTENGLLYSWGSGAFGQLG---LGD-QGDR 1251



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 151  VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
            VV  + G    A L+  G VYT+       LGH  +    + HP  +   ++  V ++  
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVC 936

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
            G  + LA   +    +VY  G G  G+LG G RT    P  I+  + +++    +AAG  
Sbjct: 937  GGEHTLA---RTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHV--TQLAAGYA 991

Query: 270  HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
            H  VV + G V  +G G  G LG G  +   VP  +QA+  +  +  A G   T +++E 
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSI--VQAACGYCHTALLTEA 1049

Query: 330  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            G+VY+ G   S  LGH   AD   N   + L P++V  L     R +          + H
Sbjct: 1050 GEVYTCGSAMSGQLGH---AD---NLQNDRLAPKMVEGLNGKRIRFIACG-------SFH 1096

Query: 390  TFALTESGKLYAFG 403
            T A+T+   +Y +G
Sbjct: 1097 TIAITDLDNVYTWG 1110



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 32/274 (11%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            +Q  AG  H+I V   G V  FG    GQLG G  ++   P  ++++    I+QAA G  
Sbjct: 984  TQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS--IVQAACGYC 1041

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             T L+++AG+VY  G    G+  +   +Q  +L  +P++VE L    +   A G+F T  
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQLGHADNLQNDRL--APKMVEGLNGKRIRFIACGSFHTIA 1099

Query: 164  LSREGRVYTFSWG------NDARLGHHTEP---NDVEPHPLLGTLENIPVVQIAAGYCYL 214
            ++    VYT  WG      +D  +    +      V P  + G L    +  ++ G+ + 
Sbjct: 1100 ITDLDNVYT--WGGVQGTDSDGAMRQERKAAILKRVTPSIVKG-LMGKRISLVSCGHAHS 1156

Query: 215  LALACQPSGMAVYSVGCGL-------GGKLGHGSRTDEKHPRLIEQF---QLLNLQPVV- 263
            +A       + V+S    L       G  L   S T E  P L+      Q    +PVV 
Sbjct: 1157 VATTMD-GEVYVWSSTGSLQPPLLLRGSGLSTASGTTEA-PLLVSAIPDGQDAKSKPVVK 1214

Query: 264  -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
              AAG     VV ++G + +WG G +G LG G++
Sbjct: 1215 HAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQ 1248



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 256  LLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVK 312
            L++++ VV  +  W H A + ++G V TWG    G LGHG++    +  PK V       
Sbjct: 871  LVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKC 930

Query: 313  AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
               V  G   T   +E G VY +G G    L       G G+R  + L P  + +L++++
Sbjct: 931  VKEVVCGGEHTLARTESGSVYGWGNGRIGQL-------GLGDRTLHWL-PVPIKTLRKMH 982

Query: 373  ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              V Q++        AHT  + +SG++  FG G+ GQLG
Sbjct: 983  --VTQLAAG-----YAHTIVVLKSGEVMVFGGGEVGQLG 1014


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 10/294 (3%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA-G 114
           + VT    V++ G+N SG LG G T+    PR + +L G +I   + G+G  ++++ A G
Sbjct: 35  LYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEG 94

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +VY +G +++ +   G     L+   Q+  +L N  V + A G+  + +L+ +G VYT+ 
Sbjct: 95  EVYTWGHNAYSQLGNGTTNNSLLPC-QISTNLVNKKVTEVACGSHHSMILTSDGEVYTWG 153

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           + N  ++G  +  N   P  +   L+N   V IA G   + ++A   +G  VY  G    
Sbjct: 154 YNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACG--QMCSMAVVENG-EVYVWGYNGN 210

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LG G+  ++  P  I   Q + +Q   VA G  H  V+  +G++  WG   YG LG G
Sbjct: 211 GQLGLGNSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268

Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
           N   +S P  +    D V  I      +T+   ++   VY +G C G+S +L +
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSITLPY 322



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 157/329 (47%), Gaps = 31/329 (9%)

Query: 83  EWRPRPIRSLQGIRIIQAA----AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
           +W     RS + +++I+ A    +     + +++  +V+A G +  G    GV  T+   
Sbjct: 6   KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGC--LGVGDTQNSV 63

Query: 139 SPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
            P+ +++L  K I  +    G     V + EG VYT  WG++A  +LG+ T  N + P  
Sbjct: 64  EPRRLDTLCGKKITCLSYGSGPH-VVVATAEGEVYT--WGHNAYSQLGNGTTNNSLLPCQ 120

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +   L N  V ++A G  + + L    S   VY+ G    G++G GS  ++  PR +   
Sbjct: 121 ISTNLVNKKVTEVACGSHHSMILT---SDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSC 177

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L N   V +A G   +  V ++G V  WG+   G LG GN   +  P  + AL  ++  
Sbjct: 178 -LQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQ 236

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V++++G +Y++G      L       G GNR +N   P  +T  K   +R
Sbjct: 237 RVACGYAHTLVLTDEGQMYAWGANSYGQL-------GTGNR-SNQSYPVPITVDK---DR 285

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFG 403
           V++I+  +S + +A   A T+  ++Y +G
Sbjct: 286 VIEIAACHSAHTSA---AKTQGSQVYMWG 311



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 28/249 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T++G VY++G N+  QLG+GTT     P  I + L   ++ + A G+  +M
Sbjct: 83  SGP-HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSM 141

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VY +G ++ G+   G    + +  P+ V S L+N   V  A G   +  +   
Sbjct: 142 ILTSDGEVYTWGYNNSGQVGSGSTANQAI--PRRVTSCLQNKIAVNIACGQMCSMAVVEN 199

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG     N  +P P  +  L+ I V ++A GY + L L  +     +
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---M 254

Query: 227 YSVGCGLGGKLGHGSRTDEKHP--------RLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           Y+ G    G+LG G+R+++ +P        R+IE         +     A  +A   Q  
Sbjct: 255 YAWGANSYGQLGTGNRSNQSYPVPITVDKDRVIE---------IAACHSAHTSAAKTQGS 305

Query: 279 RVCTWGWGR 287
           +V  WG  R
Sbjct: 306 QVYMWGQCR 314



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+  +   P  I    L+N +   VA G+ H+ ++  DG V TWG+
Sbjct: 96  VYTWGHNAYSQLGNGTTNNSLLPCQIST-NLVNKKVTEVACGSHHSMILTSDGEVYTWGY 154

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   +++P+ V   L +  A+++A G   +  V E+G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQMYAWGA 259

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  + +D
Sbjct: 260 NSYGQLG---TGNRSNQSYPVPITVD 282



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 5/168 (2%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAA 101
           ++ ++   G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR + S LQ    +  A
Sbjct: 128 KKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIA 187

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T
Sbjct: 188 CGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQ--PTPCRIAALQGIRVQRVACGYAHT 245

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            VL+ EG++Y +   +  +LG     N   P P+  T++   V++IAA
Sbjct: 246 LVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPI--TVDKDRVIEIAA 291


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 152/362 (41%), Gaps = 35/362 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+  T  G V ++G N+SGQLG GTT +   P  +  L G   +  +AG   ++ 
Sbjct: 52  SGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAG--AVAVSAGGEYSLA 109

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V A+G +++G+   G   T    SP  V  L  +  + A  GN     L  +G 
Sbjct: 110 LLGDGTVRAWGNNTYGQLGDGT--TPHRASPGAVPGLSGVVAIAA--GNNHALALLSDGT 165

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  + +    +LG  T      P  +LG      VV IAAG  + LA+    +   V + 
Sbjct: 166 VRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG---VVAIAAGENHSLAVLADGT---VRAW 219

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ T    P L+     +      +AAGA H+  V  DG V  WG+   G
Sbjct: 220 GNNTYGRLGDGTTTQRTSPVLVSSLTGV----TAIAAGANHSLAVLADGTVRAWGYNASG 275

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G     + P  V  L  V  I    G   +  +  DG   ++G   S  LG   + 
Sbjct: 276 RLGDGTTTQRATPVAVPGLTGVTEISAGGGH--SLALLADGTARAWGSNVSGQLGDGTV- 332

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
                  +N  +P LV+SL  V                 H+ AL   G   A+GA   GQ
Sbjct: 333 -------SNRTSPVLVSSLTGVTALSAG---------GNHSLALLADGTARAWGANVSGQ 376

Query: 410 LG 411
           LG
Sbjct: 377 LG 378



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 171/364 (46%), Gaps = 38/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G   ++G+N SGQLG GTT +   P  +  L G+  +  AAG   ++ 
Sbjct: 352 AGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAAL--AAGGYHSLA 409

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V A+G +++G+   G   T   T+P +V +L  +  + A  G   +  L  +G 
Sbjct: 410 VLANGTVRAWGHNTYGQ--LGDGSTAQRTAPVVVPALTGVVSLTA--GYDHSLALLSDGT 465

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V   +WGN+A  +LG  T      P  + G L N  VV ++ G  Y  ALA    G  V 
Sbjct: 466 VR--AWGNNASGQLGDGTTNQRGTPVQVSG-LTN--VVALSGGKLYH-ALALLSDGT-VR 518

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G  + G+LG GS ++   P  +    L N+  V +AAG  ++  +  +G V +WG+G 
Sbjct: 519 AWGYNMNGQLGDGSTSNRWTPVAVSG--LTNV--VAIAAGGDYSLALQSNGTVQSWGYGV 574

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LG   +     PK V  + +V AI  A G      +  DG VY++G  +   LG   
Sbjct: 575 YGPLGRDYDTYSPTPKAVPGVTNVVAI--AAGANHVLALRADGTVYAWGRNDFGQLGDGT 632

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                  R+  V  P L          VV I    +  W+ H+ AL   G +YA+G    
Sbjct: 633 TVQ----RNTPVQVPGLT--------NVVAI----ATGWD-HSLALRADGTVYAWGYNYA 675

Query: 408 GQLG 411
            QLG
Sbjct: 676 RQLG 679



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 168/363 (46%), Gaps = 35/363 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV + G V ++G N+ GQLG G+T +   P  + +L G+  +   AG   ++ 
Sbjct: 402 AGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGV--VSLTAGYDHSLA 459

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV-LSREG 168
           +   G V A+G ++ G+   G   T    +P  V  L N+  +    G  + A+ L  +G
Sbjct: 460 LLSDGTVRAWGNNASGQLGDGT--TNQRGTPVQVSGLTNVVALSG--GKLYHALALLSDG 515

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V  + +  + +LG  +  N   P  + G L N  VV IAAG  Y LAL  Q +G  V S
Sbjct: 516 TVRAWGYNMNGQLGDGSTSNRWTPVAVSG-LTN--VVAIAAGGDYSLAL--QSNGT-VQS 569

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G+ G LG    T    P+ +     +    V +AAGA H   +  DG V  WG   +
Sbjct: 570 WGYGVYGPLGRDYDTYSPTPKAVPGVTNV----VAIAAGANHVLALRADGTVYAWGRNDF 625

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G     + P  V  L +V AI  ATG   +  +  DG VY++G   +  LG  + 
Sbjct: 626 GQLGDGTTVQRNTPVQVPGLTNVVAI--ATGWDHSLALRADGTVYAWGYNYARQLGDGST 683

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
           A+ +        TP  V  L      VV ++   +      + AL  SG ++A+G    G
Sbjct: 684 ANYR-------QTPAPVPGLTN----VVAVTAGGN-----QSLALLSSGAVHAWGDNSHG 727

Query: 409 QLG 411
           +LG
Sbjct: 728 ELG 730



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 167/371 (45%), Gaps = 38/371 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV + G V ++G+N+ G+LG GTT +   P  + SL G+  I  AAGA  ++ 
Sbjct: 202 AGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAI--AAGANHSLA 259

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V A+G ++ G    G   T    +P  V  L  +  + A  G+    +     R
Sbjct: 260 VLADGTVRAWGYNASGRLGDGT--TTQRATPVAVPGLTGVTEISAGGGHSLALLADGTAR 317

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
               +WG++   +LG  T  N   P  L+ +L    V  ++AG  + LAL    +  A  
Sbjct: 318 ----AWGSNVSGQLGDGTVSNRTSPV-LVSSLTG--VTALSAGGNHSLALLADGTARA-- 368

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G  + G+LG G+ T    P  +     +      +AAG +H+  V  +G V  WG   
Sbjct: 369 -WGANVSGQLGDGTTTQRTLPVGLPGLTGV----AALAAGGYHSLAVLANGTVRAWGHNT 423

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LG G+    + P VV AL  V  + +  G   +  +  DG V ++G   S  LG   
Sbjct: 424 YGQLGDGSTAQRTAPVVVPALTGV--VSLTAGYDHSLALLSDGTVRAWGNNASGQLG--- 478

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG  N+     TP  V+ L  V      ++L+    +  H  AL   G + A+G    
Sbjct: 479 --DGTTNQRG---TPVQVSGLTNV------VALSGGKLY--HALALLSDGTVRAWGYNMN 525

Query: 408 GQLGIELVNNQ 418
           GQLG    +N+
Sbjct: 526 GQLGDGSTSNR 536



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 153/342 (44%), Gaps = 40/342 (11%)

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           E  + RP+RS    R ++ A+G   ++L +  G V A+G ++ G+   G   T   +SP 
Sbjct: 33  EAVQARPLRS-GSPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGT--TTQRSSPT 89

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTL 199
            V  L     V A  G  ++  L  +G V   +WGN+   +LG  T P+   P  + G  
Sbjct: 90  AVPGLAGAVAVSA--GGEYSLALLGDGTVR--AWGNNTYGQLGDGTTPHRASPGAVPGLS 145

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
               VV IAAG  + LAL    +   V + G    G+LG G+ T  + P       +L L
Sbjct: 146 G---VVAIAAGNNHALALLSDGT---VRAWGYNAYGQLGDGTTTQRRTP-----VAVLGL 194

Query: 260 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
             VV +AAG  H+  V  DG V  WG   YG LG G     + P +V +L  V AI  A 
Sbjct: 195 TGVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAI--AA 252

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G   +  V  DG V ++G   S  LG     DG   + A   TP  V  L  V E    I
Sbjct: 253 GANHSLAVLADGTVRAWGYNASGRLG-----DGTTTQRA---TPVAVPGLTGVTE----I 300

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           S         H+ AL   G   A+G+   GQLG   V+N+T 
Sbjct: 301 SAGG-----GHSLALLADGTARAWGSNVSGQLGDGTVSNRTS 337



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 166/411 (40%), Gaps = 82/411 (19%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV + G V ++G N+SG+LG GTT +   P  +  L G+  I  +AG G ++ 
Sbjct: 252 AGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTGVTEI--SAGGGHSLA 309

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G   A+G +  G+   G    +  TSP LV SL  +  + A  GN   A+L+ +G 
Sbjct: 310 LLADGTARAWGSNVSGQLGDGTVSNR--TSPVLVSSLTGVTALSAG-GNHSLALLA-DGT 365

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL----------------LGTLEN------------ 201
              +      +LG  T      P  L                L  L N            
Sbjct: 366 ARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGHNTYG 425

Query: 202 ---------------IP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
                          +P    VV + AGY + LAL    +   V + G    G+LG G+ 
Sbjct: 426 QLGDGSTAQRTAPVVVPALTGVVSLTAGYDHSLALLSDGT---VRAWGNNASGQLGDGTT 482

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
                P      Q+  L  VV  +G   +HA  +  DG V  WG+   G LG G+     
Sbjct: 483 NQRGTP-----VQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRW 537

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            P  V  L +V AI  A GDY +  +  +G V S+G G    LG         +      
Sbjct: 538 TPVAVSGLTNVVAI-AAGGDY-SLALQSNGTVQSWGYGVYGPLGR--------DYDTYSP 587

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           TP+ V  +      VV I+   +     H  AL   G +YA+G  D GQLG
Sbjct: 588 TPKAVPGVTN----VVAIAAGAN-----HVLALRADGTVYAWGRNDFGQLG 629



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 17/256 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+ S G V ++G N +GQLG G+T   W P  +  L    ++  AAG   ++ +   
Sbjct: 507 HALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL--TNVVAIAAGGDYSLALQSN 564

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V ++G   +G    G        +P+ V  + N+  + A   +     L  +G VY +
Sbjct: 565 GTVQSWGYGVYGP--LGRDYDTYSPTPKAVPGVTNVVAIAAGANHVL--ALRADGTVYAW 620

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              +  +LG  T      P  + G L N  VV IA G+ + LAL    +   VY+ G   
Sbjct: 621 GRNDFGQLGDGTTVQRNTPVQVPG-LTN--VVAIATGWDHSLALRADGT---VYAWGYNY 674

Query: 234 GGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             +LG GS  + +  P  +    L N+  V V AG   +  +   G V  WG   +G LG
Sbjct: 675 ARQLGDGSTANYRQTPAPVPG--LTNV--VAVTAGGNQSLALLSSGAVHAWGDNSHGELG 730

Query: 293 HGNEECESVPKVVQAL 308
           +G+      P  V  L
Sbjct: 731 NGSTLTPPAPVAVTGL 746


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 22/289 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H +A+ S G V+++G   SG+LG GT      P PI  L GI  I  +AG   T+ 
Sbjct: 92  AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITAI--SAGWNHTLA 149

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 168
           +   G ++     S+G+ +YG  GT   T+  + ++    I +   + G   + V+  +G
Sbjct: 150 LKADGTLW-----SWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDG 204

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+++   N  +LG+ T  N+  PH + G L  I  + ++AG  +  AL    S   V++
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQISG-LNGI--INVSAGVIHSTALK---SDGTVWN 258

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 287
            GC   G+L +G++ D   P      Q   L  ++     W  ++ +  DG    WG   
Sbjct: 259 WGCNFRGELANGNKIDSYIP-----VQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVND 313

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           YG LG+G++   + P  V +L+ + AI   TG   T  +  DG++++FG
Sbjct: 314 YGQLGNGSKSDVTSPMQVSSLSGITAID--TGATYTVALKTDGNIFAFG 360



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 162/363 (44%), Gaps = 39/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   +IA+ + G V+S+G N +G LG GTT     P  ++ L GI  I  +AG    + 
Sbjct: 42  AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAI--SAGWAHFVA 99

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G    GE   G     L T+P  +  L  I  + A  G   T  L  +G 
Sbjct: 100 LKSDGTVWTWGVGYSGELGDGTN--SLRTTPAPINGLTGITAISA--GWNHTLALKADGT 155

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           ++  SWG +   +LG     N   P  + G    I +  I++G  + L +    +   V+
Sbjct: 156 LW--SWGQNQYGQLGTGNTTNSNIPLQVPG---QIGITSISSGGGHSLVIKNDGT---VW 207

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S GC   G+LG+G+ ++   P  I     +    + V+AG  H+  +  DG V  WG   
Sbjct: 208 SWGCNNFGQLGNGTNSNNPTPHQISGLNGI----INVSAGVIHSTALKSDGTVWNWGCNF 263

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G L +GN+    +P     LN + AI  A  ++++  +  DG  + +G  +   LG+ +
Sbjct: 264 RGELANGNKIDSYIPVQANGLNGIIAI-TAGWEFSS-AIKSDGTFWVWGVNDYGQLGNGS 321

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            +D        V +P  V+SL  +    +    T       +T AL   G ++AFG    
Sbjct: 322 KSD--------VTSPMQVSSLSGI--TAIDTGAT-------YTVALKTDGNIFAFGENTY 364

Query: 408 GQL 410
           GQL
Sbjct: 365 GQL 367



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 22/166 (13%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
           + V+AG      +  DG V +WG+ + G LG G     + P  V+ LN + AI      +
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
               +  DG V+++G G S  LG     DG  +      TP  +  L  +          
Sbjct: 98  --VALKSDGTVWTWGVGYSGELG-----DGTNSLRT---TPAPINGLTGITAI------- 140

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            S  WN HT AL   G L+++G    GQLG     N T    P +V
Sbjct: 141 -SAGWN-HTLALKADGTLWSWGQNQYGQLG---TGNTTNSNIPLQV 181



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 12/203 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G GHS+ + + G V+S+G N+ GQLG+GT      P  I  L G  II  +AG   +  
Sbjct: 192 SGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNG--IINVSAGVIHSTA 249

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G +  GE   G +    +  P     L  I  + A  G  F++ +  +G 
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYI--PVQANGLNGIIAITA--GWEFSSAIKSDGT 305

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            + +   +  +LG+ ++ +DV     + +L  I    I  G  Y +AL    +   +++ 
Sbjct: 306 FWVWGVNDYGQLGNGSK-SDVTSPMQVSSLSGI--TAIDTGATYTVALKTDGN---IFAF 359

Query: 230 GCGLGGKLGHGSRTDEKHPRLIE 252
           G    G+LG+G+ T    P L+ 
Sbjct: 360 GENTYGQLGNGTTTGSTTPELVS 382


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 14/316 (4%)

Query: 25  GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 83
           G W +   F L  +   +      + G G+ +  +T    V+  G+NSSG LG G  +  
Sbjct: 5   GKWPI---FALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI 61

Query: 84  WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 141
             PR I  L G RI+  + G+G   ++++  G+VY++G +++  ++ G   T    SP Q
Sbjct: 62  LEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           +  +L N   +  A G+  + VL+ +G VY + + N  ++G  +  N   P  +   L+N
Sbjct: 120 VSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
             V+ IA G   + ++A   +G  VY+ G    G+LG GS  ++  P  I   Q + ++ 
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 320
           VV   G  H   +  +G +  WG   YG LG GN+  +S P +V+     +  I      
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294

Query: 321 YTTFVVSEDGDVYSFG 336
           +T+   S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VYS G     +LG+GS      P  +    L+N + + VA G+ H+ V+  DG V  WG+
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAISVACGSHHSMVLTCDGEVYAWGY 153

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P KV   L +   I +A G  ++  V ++G+VY++G   +  LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV Q+     +   AHT ALT+ G +YA+GA
Sbjct: 214 LGS----SGNQP----TPCRIAALQGI--RVEQV-----VCGYAHTLALTDEGVMYAWGA 258

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P +V +D
Sbjct: 259 NSYGQLG---TGNKSNQSYPVQVIVD 281



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 45  NSQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
           N +AI+   G  HS+ +T  G VY++G N+SGQ+G G+T  +  PR + S LQ   +I  
Sbjct: 126 NKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGI 185

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VYA+G +  G+   G  G +   +P  + +L+ I V Q   G   
Sbjct: 186 ACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVEQVVCGYAH 243

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+ EG +Y +   +  +LG   + N  + +P+   ++   +V+IAA +    + A  
Sbjct: 244 TLALTDEGVMYAWGANSYGQLGTGNKSN--QSYPVQVIVDKERIVEIAACHSSHTSAAKS 301

Query: 221 PSGMAVYSVGCGLGGK-----LGHGSRTDE-----KHPRLIEQFQLLNLQP 261
            SG  VY  G   G       L H S TD+       P ++  ++LL+++P
Sbjct: 302 QSGQ-VYMWGQCRGQSVITPHLTHFSCTDDVFACFSTPAIM--WRLLSVEP 349


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 25/291 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  +G V+++G+ S GQLG G  +   + P+ I++L GI+IIQ + G   ++ 
Sbjct: 54  GQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLA 113

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S+ GQV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 114 LSEGGQVFSWGKNSQGQLGLGKEFPS-QDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGT 172

Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             +F WGN+     A  G++      +P   +G L N+ V+ I+ GY +   L       
Sbjct: 173 --SFGWGNNSAGQLALSGNNVPVQSYKPRS-IGALRNLGVIYISCGYEHTAVLT---QNG 226

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
            V++ G    G+LGH     ++ P+L+E+   L  Q   +  G++H  A V   G+V ++
Sbjct: 227 KVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQ---IDCGSYHTLAYVYTTGQVVSF 283

Query: 284 GWGRYGCLG---HGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVS 327
           G G   C     H   + E    S     + L DV+  H+  G Y  FV +
Sbjct: 284 GRGP-SCRSSSTHPEAQIENFDISCLLSAEDLVDVQVKHIFAGTYANFVTT 333



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 13/265 (4%)

Query: 81  EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTS 139
           EE   P PIR+L+ +R+   + G   ++ +   G+V+A+G  S G+   G V+G     +
Sbjct: 32  EETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINF--T 89

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTE-PNDVEPHPLL 196
           P+ +++L  I ++Q + G++ +  LS  G+V  FSWG +++  LG   E P+   P   +
Sbjct: 90  PKKIKTLTGIKIIQVSCGDYHSLALSEGGQV--FSWGKNSQGQLGLGKEFPSQDSPQ-RV 146

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
            +LE IP+ Q+AAG  +  AL+   +     +   G     G+        PR I    L
Sbjct: 147 RSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG--AL 204

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
            NL  + ++ G  H AV+ Q+G+V T+G    G LGH     +  P++V+ ++ + +  +
Sbjct: 205 RNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVS-QI 263

Query: 317 ATGDYTTFV-VSEDGDVYSFGCGES 340
             G Y T   V   G V SFG G S
Sbjct: 264 DCGSYHTLAYVYTTGQVVSFGRGPS 288



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 21/217 (9%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G V+S+G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 103 QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGA 162

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +  +S +G  + +G +S G+         VQ  K    P+ + +L+N+ V+  + G   
Sbjct: 163 HSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYK----PRSIGALRNLGVIYISCGYEH 218

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           TAVL++ G+V+TF   +  +LGH     D  P  L+  ++ + V QI  G  + LA    
Sbjct: 219 TAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQ-LVERIDGL-VSQIDCGSYHTLAY--- 273

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQL 256
                VY+ G  +    G   R+   HP   IE F +
Sbjct: 274 -----VYTTGQVVSFGRGPSCRSSSTHPEAQIENFDI 305



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 17/185 (9%)

Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVP 302
           + K+P  I   + L +   +V+ G  H+  V   GRV  WG G  G LG G  +     P
Sbjct: 33  ETKNPEPIRTLETLRVS--LVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTP 90

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           K ++ L  +K I V+ GDY +  +SE G V+S+G      L       G G    +  +P
Sbjct: 91  KKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQL-------GLGKEFPSQDSP 143

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
           Q V SL+        I L       AH+FAL+ SG  + +G    GQL +   N   +  
Sbjct: 144 QRVRSLE-------GIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSY 196

Query: 423 NPERV 427
            P  +
Sbjct: 197 KPRSI 201



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 31/293 (10%)

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           F  D    +   ++ TK   +P+ + +L+ + V   + G   +  +   GRV+ +  G++
Sbjct: 19  FSVDFMPPSNSPLEETK---NPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSE 75

Query: 179 ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
            +LG    +  +  P  +  TL  I ++Q++ G  + LAL+    G  V+S G    G+L
Sbjct: 76  GQLGTGEVKGINFTPKKI-KTLTGIKIIQVSCGDYHSLALS---EGGQVFSWGKNSQGQL 131

Query: 238 GHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG--CLGHG 294
           G G     +  P+ +   + + L    VAAG  H+  +   G    WG    G   L   
Sbjct: 132 GLGKEFPSQDSPQRVRSLEGIPL--AQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGN 189

Query: 295 NEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           N   +S  P+ + AL ++  I+++ G   T V++++G V++FG      LGH+  A  +G
Sbjct: 190 NVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG 249

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 405
                   PQLV   ++++  V QI        + HT A +  +G++ +FG G
Sbjct: 250 --------PQLV---ERIDGLVSQIDCG-----SYHTLAYVYTTGQVVSFGRG 286



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +G+NS+GQL   G+    + ++PR I +L+ + +I  + 
Sbjct: 155 AQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISC 214

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +S G  + G   +     PQLVE +  + V Q   G++ T 
Sbjct: 215 GYEHTAVLTQNGKVFTFGDNSCG--QLGHSPSAQDRGPQLVERIDGL-VSQIDCGSYHTL 271

Query: 162 AVLSREGRVYTFSWGNDAR 180
           A +   G+V +F  G   R
Sbjct: 272 AYVYTTGQVVSFGRGPSCR 290



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 20/222 (9%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRL 250
           P P+  TLE + V  ++ G  + LA+ C      V++ G G  G+LG G  +     P+ 
Sbjct: 37  PEPI-RTLETLRVSLVSCGQEHSLAV-CHRG--RVFAWGAGSEGQLGTGEVKGINFTPKK 92

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALN 309
           I+   L  ++ + V+ G +H+  + + G+V +WG    G LG G E   +  P+ V++L 
Sbjct: 93  IKT--LTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLE 150

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
            +    VA G   +F +S  G   SFG G +++     +A    N       P+ + +L+
Sbjct: 151 GIPLAQVAAGGAHSFALSVSGT--SFGWGNNSA---GQLALSGNNVPVQSYKPRSIGALR 205

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             N  V+ IS         HT  LT++GK++ FG    GQLG
Sbjct: 206 --NLGVIYISCGYE-----HTAVLTQNGKVFTFGDNSCGQLG 240


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  107 bits (266), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 104/392 (26%), Positives = 190/392 (48%), Gaps = 43/392 (10%)

Query: 46   SQAIAGPGHSIAV---TSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIR--SLQGIRIIQ 99
            S +++   H  A+   TS+G++ ++GS S+ +LG   T +++ +P P R  +     I  
Sbjct: 695  SPSLSSTAHRSAIHLDTSRGLM-TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICS 753

Query: 100  AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAI 156
             ++G+  + ++++ G VY +G+ +       + G   +     P  +ESL +  VV  +I
Sbjct: 754  ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSI 811

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
            G    A +   G + T+  G + +LGH    N +EP  ++ +L +  + Q+  G  + + 
Sbjct: 812  GFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPK-IIQSLTSFWITQVQCGEKHTI- 869

Query: 217  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
              C      VYS G    G+LG G  T    P  +   +  N+  + +A+G+ H AV+  
Sbjct: 870  --CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNV--LQIASGSTHCAVLTT 925

Query: 277  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
               V  +G G       G     S+P +V +L  +    +  G Y+T  ++E GDVY++G
Sbjct: 926  SKEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG 981

Query: 337  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             G+   LGH       GN  +   +P+L+ +L+  N+ + QIS         HT  LT+S
Sbjct: 982  TGQ--ELGHG------GN--STETSPKLIEALR--NQSIRQISCGGR-----HTAFLTDS 1024

Query: 397  GKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            G+++  G    GQLG ++  +Q +   P+R++
Sbjct: 1025 GRIFTCGKDSFGQLG-QMSGDQNK---PKRIE 1052



 Score =  105 bits (262), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 31/275 (11%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H  AV + G + ++G   +GQLGHG T  +  P+ I+SL    I Q   G   T+ ++  
Sbjct: 815  HGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKN 874

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
            G+VY     S+G +EYG  G   VT   SP  V +L+   V+Q A G+   AVL+    V
Sbjct: 875  GKVY-----SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEV 929

Query: 171  YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPSGMAVYSV 229
              F  GN A +G               ++ ++P +  +  Y ++  L C   S  A+   
Sbjct: 930  LVF--GNGAAMG-------------AASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITEC 974

Query: 230  G----CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            G     G G +LGHG  + E  P+LIE  +  +++   ++ G  H A +   GR+ T G 
Sbjct: 975  GDVYTWGTGQELGHGGNSTETSPKLIEALRNQSIRQ--ISCGGRHTAFLTDSGRIFTCGK 1032

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              +G LG  + + ++ PK +++L     I V+ G+
Sbjct: 1033 DSFGQLGQMSGD-QNKPKRIESLTKTTFISVSCGE 1066


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLTVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G ++S G  A++       +N   P  V +LK +   VV IS  +    
Sbjct: 197 SLCGT--SFGWGSNSS-GQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            AHT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNSSGQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 176/375 (46%), Gaps = 52/375 (13%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           +AVT  G ++++G N  G+LG G T ++  P  +  L    ++  A G   ++ +S  G 
Sbjct: 1   MAVTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS--NVVSLAGGEKHSLAVSGDGS 58

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+++G +S G+      G + +T   ++  +  ++      G+ F      +G   T   
Sbjct: 59  VWSWGSNSAGQL-----GVESLTPASVLAPVHALYS-----GDDFHLFYDTDGD-GTGDI 107

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            +D       +P    P  L G    +P+  +AAG  + L L    +   V+S GC    
Sbjct: 108 CDDCPY----DPFKTAPG-LSGCGNAVPM--LAAGTQFSLGLKTDGT---VWSWGCNTYA 157

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
            LG G R D   P+ +E         V +AAG  H   + +DG V +WGW   G LG G+
Sbjct: 158 TLGLGDRVDRNTPQKVEALS----NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGS 213

Query: 296 ---EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
              +  ES PK V+A+++V AI   T  Y T  ++ DG+V+S+G  +   LG       Q
Sbjct: 214 IHEDTYESTPKKVEAISNVTAIAAQT--YHTQALTRDGNVWSWGSNDFGQLGMGD----Q 267

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            +R A    PQ V +L      VV I+   +     H+ A+T  G+++A+G   +GQLG+
Sbjct: 268 NDRDA----PQKVEALS----NVVAINAGGN-----HSLAVTRDGQVWAWGENSEGQLGL 314

Query: 413 ELVNNQTERGNPERV 427
               +  +R  P++V
Sbjct: 315 ---GDLWDRDAPQKV 326



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 17/241 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S+ + + G V+S+G N+   LG G   +   P+ + +L     +  AAG   T+ 
Sbjct: 134 AGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALS--NAVALAAGDDHTLA 191

Query: 110 ISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++  G V+++G +  G+   G +      ++P+ VE++ N+  + A    + T  L+R+G
Sbjct: 192 LTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQT--YHTQALTRDG 249

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+++   +  +LG   + ND +    +  L N  VV I AG  + LA+        V++
Sbjct: 250 NVWSWGSNDFGQLGMGDQ-NDRDAPQKVEALSN--VVAINAGGNHSLAVT---RDGQVWA 303

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G   D   P+ +E    +    V + AG  H   + +DG V  W WG+ 
Sbjct: 304 WGENSEGQLGLGDLWDRDAPQKVEALSNV----VAINAGGDHTLALTRDGSV--WAWGKN 357

Query: 289 G 289
           G
Sbjct: 358 G 358



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AVT  G V+++G NS GQLG G   +   P+ + +L  +  I   AG   T+ 
Sbjct: 287 AGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALSNVVAIN--AGGDHTLA 344

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFV 151
           ++  G V+A+GK+  G+   G +G  L   P  ++ S +N ++
Sbjct: 345 LTRDGSVWAWGKNGRGQIGTG-EGQSLYNEPVHVIYSDENFYL 386


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 10/262 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+ +  VV S+G    GQLGHG T++   P  + +  G  I+    GA  T+ 
Sbjct: 19  AGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVA 78

Query: 110 ISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            S +G+ VY++G   FG   +G      +  P  + +L+ + + Q + G+     ++ E 
Sbjct: 79  RSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMEN 136

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +V ++    +  LG  T  +   P  +L   E I +  +AAG  + +A+        +Y 
Sbjct: 137 KVLSWGRNQNGELGLGTTKDSHVPQKIL-AFEGIRIKMVAAGAEHSVAITEDGD---LYG 192

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G G  G LG G   D   P   E+  +   + V+V+ G  H   +   G + T GW +Y
Sbjct: 193 WGWGRYGNLGLGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249

Query: 289 GCLGHGNEECESVPKVVQALND 310
           G LGHG+ E   VP+ VQAL+D
Sbjct: 250 GQLGHGDFEDCLVPRKVQALSD 271



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 24/228 (10%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V+ I+AG  + +AL    +G  V S G G  G+LGHG   D   P  +  F   ++  V 
Sbjct: 14  VLLISAGASHTVALL---TGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VS 68

Query: 264 VAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
           V  GA +     + G+ V +WGWG +G LGHG+     +P  ++AL  ++   ++ GD  
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCH 128

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
              V+ +  V S+G  ++  LG     D           PQ + + + +  ++V      
Sbjct: 129 CLAVTMENKVLSWGRNQNGELGLGTTKDSH--------VPQKILAFEGIRIKMVAAG--- 177

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
                 H+ A+TE G LY +G G  G LG+    +  +R  PE+V+ID
Sbjct: 178 ----AEHSVAITEDGDLYGWGWGRYGNLGL---GDTNDRLIPEKVNID 218



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 21/261 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           V+  + G   T  L     V ++  G D +LGH    + + P  L    +   +V +  G
Sbjct: 14  VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKL-SAFDGQDIVSVTCG 72

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             Y +A +   SG  VYS G G  G+LGHG  +D   P  I   Q L ++ +  + G  H
Sbjct: 73  ADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI--SCGDCH 128

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
              V  + +V +WG  + G LG G  +   VP+ + A   ++   VA G   +  ++EDG
Sbjct: 129 CLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 188

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           D+Y +G G   +LG     D         L P+ V       +++V +S      W  HT
Sbjct: 189 DLYGWGWGRYGNLGLGDTND--------RLIPEKVNI---DGDKIVMVSCG----WR-HT 232

Query: 391 FALTESGKLYAFGAGDKGQLG 411
            +++ SG LY  G    GQLG
Sbjct: 233 ISISSSGGLYTHGWSKYGQLG 253



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H +AVT +  V S+G N +G+LG GTT++   P+ I + +GIRI   AAGA  
Sbjct: 121 QISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEH 180

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I++ G +Y +G   +G    G    +L+     ++  K   +V  + G   T  +S 
Sbjct: 181 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK---IVMVSCGWRHTISISS 237

Query: 167 EGRVYTFSWGNDARLGH 183
            G +YT  W    +LGH
Sbjct: 238 SGGLYTHGWSKYGQLGH 254


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 14/316 (4%)

Query: 25  GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 83
           G W +   F L  +   +      + G G+ +  +T    V+  G+NSSG LG G  +  
Sbjct: 5   GKWPI---FALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI 61

Query: 84  WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 141
             PR I  L G RI+  + G+G   ++++  G+VY++G +++  ++ G   T    SP Q
Sbjct: 62  IEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           +  +L N   +  A G+  + VL+ +G VY + + N  ++G  +  N   P  +   L+N
Sbjct: 120 VSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
             V+ IA G   + ++A   +G  VY+ G    G+LG GS  ++  P  I   Q + ++ 
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 320
           VV   G  H   +  +G +  WG   YG LG GN+  +S P +V+     +  I      
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294

Query: 321 YTTFVVSEDGDVYSFG 336
           +T+   S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VYS G     +LG+GS      P  +    L+N + + VA G+ H+ V+  DG V  WG+
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAISVACGSHHSMVLTCDGEVYAWGY 153

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P KV   L +   I +A G  ++  V ++G+VY++G   +  LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV Q+     +   AHT ALT+ G +YA+GA
Sbjct: 214 LGS----SGNQP----TPCRIAALQGI--RVEQV-----VCGYAHTLALTDEGVMYAWGA 258

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P +V +D
Sbjct: 259 NSYGQLG---TGNKSNQSYPVQVIVD 281



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 45  NSQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
           N +AI+   G  HS+ +T  G VY++G N+SGQ+G G+T  +  PR + S LQ   +I  
Sbjct: 126 NKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGI 185

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VYA+G +  G+   G  G +   +P  + +L+ I V Q   G   
Sbjct: 186 ACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVEQVVCGYAH 243

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+ EG +Y +   +  +LG   + N  + +P+   ++   +V+IAA +    + A  
Sbjct: 244 TLALTDEGVMYAWGANSYGQLGTGNKSN--QSYPVQVIVDKERIVEIAACHSSHTSAAKS 301

Query: 221 PSGMAVYSVGCGLGGK-----LGHGSRTDE-----KHPRLIEQFQLLNLQP 261
            SG  VY  G   G       L H S TD+       P ++  ++LL+++P
Sbjct: 302 QSGQ-VYMWGQCRGQSVITPHLTHFSCTDDVFACFSTPAIM--WRLLSVEP 349


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 16/289 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  V+ IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMSIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G++  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D    + A H A   +T+   S+ G VY +G C G+S  L H
Sbjct: 301 TPVVVEKDRIIEIAACHSA---HTSAAKSQGGHVYMWGQCRGQSVILPH 346



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG++Y +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 4/138 (2%)

Query: 40  CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           C + +   +IA G   S+AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ 
Sbjct: 201 CLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           + A G   T++++D GQ+YA+G +S+G+   G +  +   +P +VE    I  + A    
Sbjct: 261 RVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSA 319

Query: 159 FFTAVLSREGRVYTFSWG 176
             +A  S+ G VY   WG
Sbjct: 320 HTSAAKSQGGHVYM--WG 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 42/381 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG  H++ + S G V+++G NSSGQLG G T    +P  +  L  I  +  A G G ++
Sbjct: 416 VAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSV 473

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G ++A+G +  G+   G+  T+ +  P     L +I  + A  G+  +  L   G
Sbjct: 474 AVGSDGGIWAWGDNRRGQLGIGITATREI--PVQATGLASISALAA--GDSHSLALRGNG 529

Query: 169 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            V+T  WG++A  +LG  T  +      + G  +   +  +AAG  + LAL    +   V
Sbjct: 530 SVWT--WGSNAYGQLGDGTAIDRATAAQVPGLTD---ITALAAGNHHSLALRNDGT---V 581

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G+LG G+ T  K P  +     +      V AG  H+  V  +G V  WG  
Sbjct: 582 WVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMR----AVEAGPAHSVAVHLNGTVWVWGNN 637

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            +G LG G     ++P  V  L  V A  VA G Y +  +  DG ++++G      LG+ 
Sbjct: 638 DFGQLGDGTVTSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNG 695

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                         T  + ++  QV      I+L      N H+ AL   G ++ +GA  
Sbjct: 696 --------------TSGIQSTPAQVPGLTGVIALAAG---NGHSLALRTDGTVWGWGANS 738

Query: 407 KGQLGIELVNNQTERGNPERV 427
            GQLG       T R  P +V
Sbjct: 739 FGQLGD---GTTTPRSTPTQV 756



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 166/407 (40%), Gaps = 56/407 (13%)

Query: 35  LAG-EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 93
           LAG  A     N   +A   HS+A+ S G V+++G NS+GQLG GTT E  R  P++ L 
Sbjct: 242 LAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTE--RATPVQVLG 299

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
              +   AAGA  ++ + D G V+A+G +S G+   G   T    +P  V  L ++  V 
Sbjct: 300 LTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT--TTARPTPVQVPGLTSVIAVA 357

Query: 154 AAIGN-------FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
           A  G+         +  L  +G V+ + +    + G         P         + V +
Sbjct: 358 AGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTP---------VQVSE 408

Query: 207 IAAGYCY----LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
           +  G       L A+  +  G  V++ G    G+LG G       P  +     +     
Sbjct: 409 LTGGTALVAGDLHAVVLKSDGT-VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAI----T 463

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +A G  H+  VG DG +  WG  R G LG G      +P     L  + A+  A GD  
Sbjct: 464 ALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLASISAL--AAGDSH 521

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISL 380
           +  +  +G V+++G      LG     D    R      P L  +T+L   N        
Sbjct: 522 SLALRGNGSVWTWGSNAYGQLGDGTAID----RATAAQVPGLTDITALAAGNH------- 570

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                   H+ AL   G ++ +G+ D GQLG   V   T R  P +V
Sbjct: 571 --------HSLALRNDGTVWVWGSNDFGQLGDGTV---TSRKTPVQV 606



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 177/407 (43%), Gaps = 69/407 (16%)

Query: 33  FLLAGEACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
           F L   AC     + A++  G H++A+   G V+++G N SGQLG+GT  +  R  P++ 
Sbjct: 136 FTLTANACP----APAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATD--RATPVQV 189

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
                ++  AA    ++ +   G V+A+G + +G+   G +  +  T+P  V  L  +  
Sbjct: 190 PGLTSVMAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQR--TTPVQVLGLAGVTA 247

Query: 152 VQAAIGNFFTAVLS-------REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
           + AA GN  T  +S        +G V+  +WG+++  +LG  T      P  +LG     
Sbjct: 248 L-AAGGNGTTVAISAHSLALRSDGTVW--AWGDNSAGQLGDGTTTERATPVQVLGLTS-- 302

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V  +AAG  + LAL    +   V++ G    G+LG G+ T    P      Q+  L  V
Sbjct: 303 -VTALAAGAFHSLALRDDGT---VWAWGNNSSGQLGDGTTTARPTP-----VQVPGLTSV 353

Query: 263 V-VAAGAW---------HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           + VAAG           H+  +  DG V  WG+      G G     + P  V  L    
Sbjct: 354 IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGT 413

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
           A+    GD    V+  DG V+++G   S  LG               +TP        V 
Sbjct: 414 AL--VAGDLHAVVLKSDGTVWAWGDNSSGQLGEG-------------VTP--------VR 450

Query: 373 ERVVQIS----LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            + +Q+S    +T     + H+ A+   G ++A+G   +GQLGI + 
Sbjct: 451 AKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGIT 497



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 159/372 (42%), Gaps = 46/372 (12%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-- 111
           HS+A+ S G V+++G N  GQLG GT  +   P  +  L G+  + AA G G T+ IS  
Sbjct: 204 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTAL-AAGGNGTTVAISAH 262

Query: 112 -----DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
                  G V+A+G +S G+   G   T    +P  V  L ++  + A  G F +  L  
Sbjct: 263 SLALRSDGTVWAWGDNSAGQLGDGT--TTERATPVQVLGLTSVTALAA--GAFHSLALRD 318

Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL-----LALAC 219
           +G V+  +WGN++  +LG  T      P  + G L ++  V    G   L      +LA 
Sbjct: 319 DGTVW--AWGNNSSGQLGDGTTTARPTPVQVPG-LTSVIAVAAGGGDDSLGMRGDHSLAL 375

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           +  G  V++ G  L  + G G       P  + +          + AG  HA V+  DG 
Sbjct: 376 KSDGT-VWAWGYNLSRQFGDGMPATRTTPVQVSELT----GGTALVAGDLHAVVLKSDGT 430

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG    G LG G     + P  V  L  + A+  ATGD  +  V  DG ++++G   
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSVAVGSDGGIWAWGDNR 488

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG    A  +         P   T L  ++              ++H+ AL  +G +
Sbjct: 489 RGQLGIGITATRE--------IPVQATGLASISALAAG---------DSHSLALRGNGSV 531

Query: 400 YAFGAGDKGQLG 411
           + +G+   GQLG
Sbjct: 532 WTWGSNAYGQLG 543



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 157/364 (43%), Gaps = 39/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+++GSN+ GQLG GT  +      +  L  I  +  AAG   ++ 
Sbjct: 517 AGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITAL--AAGNHHSLA 574

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G V+ +G + FG+   G   ++   +P  V  L  +  V+A  G   +  +   G 
Sbjct: 575 LRNDGTVWVWGSNDFGQLGDGTVTSR--KTPVQVSGLSAMRAVEA--GPAHSVAVHLNGT 630

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+   WGN+   +LG  T  +   P  + G      V  +A G  + LAL    +   ++
Sbjct: 631 VWV--WGNNDFGQLGDGTVTSRAMPVQVSGLTG---VTAVAVGVYHSLALRNDGT---LW 682

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+G+   +  P  +     +    + +AAG  H+  +  DG V  WG   
Sbjct: 683 AWGYNNVGQLGNGTSGIQSTPAQVPGLTGV----IALAAGNGHSLALRTDGTVWGWGANS 738

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G LG G     S P  V  L +V A++   G + T  +  +  V+ +G   +  LG   
Sbjct: 739 FGQLGDGTTTPRSTPTQVPGLTNVIALNA--GAFYTVALRSERSVWEWGSKSAGQLGDGT 796

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           +            TP  V+ L  V               NAH  AL     ++A+G   +
Sbjct: 797 VT--------QKTTPVQVSGLTDVTALAAG---------NAHALALRTDRTVWAWGGNQR 839

Query: 408 GQLG 411
           GQ+G
Sbjct: 840 GQIG 843



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 167/420 (39%), Gaps = 92/420 (21%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG---- 105
           AG  HS+A+   G V+++G+NSSGQLG GTT    RP P++      +I  AAG G    
Sbjct: 308 AGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGGDDSL 365

Query: 106 -----RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                 ++ +   G V+A+G +   +   G+  T+  T+P  V  L     + A  G+  
Sbjct: 366 GMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATR--TTPVQVSELTGGTALVA--GDLH 421

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG--------------------- 197
             VL  +G V+  +WG+++  +LG    P   +P  + G                     
Sbjct: 422 AVVLKSDGTVW--AWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDG 479

Query: 198 ------------------TLENIPV--------VQIAAGYCYLLALACQPSGMAVYSVGC 231
                                 IPV          +AAG  + LAL    S   V++ G 
Sbjct: 480 GIWAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGS---VWTWGS 536

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G+LG G+  D      +     +      +AAG  H+  +  DG V  WG   +G L
Sbjct: 537 NAYGQLGDGTAIDRATAAQVPGLTDI----TALAAGNHHSLALRNDGTVWVWGSNDFGQL 592

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G G       P  V  L+ ++A+    G   +  V  +G V+ +G  +   LG     DG
Sbjct: 593 GDGTVTSRKTPVQVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLG-----DG 645

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                A    P  V+ L  V    V       +Y   H+ AL   G L+A+G  + GQLG
Sbjct: 646 TVTSRA---MPVQVSGLTGVTAVAV------GVY---HSLALRNDGTLWAWGYNNVGQLG 693



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AGP HS+AV   G V+ +G+N  GQLG GT      P  +  L G+  +  A G   ++ 
Sbjct: 617 AGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYHSLA 674

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G ++A+G ++ G+   G  G +  ++P  V  L  +  + A  GN  +  L  +G 
Sbjct: 675 LRNDGTLWAWGYNNVGQLGNGTSGIQ--STPAQVPGLTGVIALAA--GNGHSLALRTDGT 730

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +  +LG  T      P  + G L N  V+ + AG  Y +AL  + S   V+  
Sbjct: 731 VWGWGANSFGQLGDGTTTPRSTPTQVPG-LTN--VIALNAGAFYTVALRSERS---VWEW 784

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T +  P      Q+  L  V  +AAG  HA  +  D  V  WG  + 
Sbjct: 785 GSKSAGQLGDGTVTQKTTP-----VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQR 839

Query: 289 GCLGHGNEECESVP 302
           G +G G       P
Sbjct: 840 GQIGDGTASIMPAP 853


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 22/289 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H +A+ S G V+++G   SG+LG GT      P PI  L GI  I  +AG   T+ 
Sbjct: 92  AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITAI--SAGWNHTLA 149

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 168
           +   G ++     S+G+ +YG  GT   T+  + ++    I +   + G   + V+  +G
Sbjct: 150 LKADGTLW-----SWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDG 204

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+++   N  +LG+ T  N+  PH + G L  I  + ++AG  +  AL    S   V++
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQISG-LNGI--INVSAGVIHSTALK---SDGTVWN 258

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 287
            GC   G+L +G++ D   P      Q   L  ++     W  ++ +  DG    WG   
Sbjct: 259 WGCNFRGELANGNKIDSYIP-----VQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVND 313

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           YG LG+G++   + P  V +L+ + AI   TG   T  +  DG++++FG
Sbjct: 314 YGQLGNGSKSDVTSPMQVSSLSGITAID--TGATYTVALKTDGNIFAFG 360



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 163/363 (44%), Gaps = 39/363 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   +IA+ + G V+S+G N +G LG GTT     P  ++ L GI  I  +AG    + 
Sbjct: 42  AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAI--SAGWAHFVA 99

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G    GE   G     L T+P  +  L  I  + A  G   T  L  +G 
Sbjct: 100 LKSDGTVWTWGVGYSGELGDGTN--SLRTTPAPINGLTGITAISA--GWNHTLALKADGT 155

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           ++  SWG +   +LG     N   P  + G    I +  I++G  + L +    +   V+
Sbjct: 156 LW--SWGQNQYGQLGTGNTTNSNIPLQVPG---QIGITSISSGGGHSLVIKNDGT---VW 207

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           S GC   G+LG+G+ ++   P  I     +    + V+AG  H+  +  DG V  WG   
Sbjct: 208 SWGCNNFGQLGNGTNSNNPTPHQISGLNGI----INVSAGVIHSTALKSDGTVWNWGCNF 263

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G L +GN+    +P     LN + AI  A  ++++ + S DG  + +G  +   LG+ +
Sbjct: 264 RGELANGNKIDSYIPVQANGLNGIIAI-TAGWEFSSAIKS-DGTFWVWGVNDYGQLGNGS 321

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            +D        V +P  V+SL  +    +    T       +T AL   G ++AFG    
Sbjct: 322 KSD--------VTSPMQVSSLSGI--TAIDTGAT-------YTVALKTDGNIFAFGENTY 364

Query: 408 GQL 410
           GQL
Sbjct: 365 GQL 367



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 22/166 (13%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
           + V+AG      +  DG V +WG+ + G LG G     + P  V+ LN + AI      +
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
               +  DG V+++G G S  LG     DG  +      TP  +  L  +          
Sbjct: 98  --VALKSDGTVWTWGVGYSGELG-----DGTNSLRT---TPAPINGLTGITAI------- 140

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            S  WN HT AL   G L+++G    GQLG     N T    P +V
Sbjct: 141 -SAGWN-HTLALKADGTLWSWGQNQYGQLG---TGNTTNSNIPLQV 181



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 12/203 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G GHS+ + + G V+S+G N+ GQLG+GT      P  I  L G  II  +AG   +  
Sbjct: 192 SGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNG--IINVSAGVIHSTA 249

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G +  GE   G +    +  P     L  I  + A  G  F++ +  +G 
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYI--PVQANGLNGIIAITA--GWEFSSAIKSDGT 305

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            + +   +  +LG+ ++ +DV     + +L  I    I  G  Y +AL    +   +++ 
Sbjct: 306 FWVWGVNDYGQLGNGSK-SDVTSPMQVSSLSGI--TAIDTGATYTVALKTDGN---IFAF 359

Query: 230 GCGLGGKLGHGSRTDEKHPRLIE 252
           G    G+LG+G+ T    P L+ 
Sbjct: 360 GENTYGQLGNGTTTGSTTPELVS 382


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 168/375 (44%), Gaps = 39/375 (10%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGV 63
           K  IF   +EAE Q ++Q C           + G A                +  T    
Sbjct: 6   KWPIFSLCSEAELQLVRQAC-----------VFGSA------------SNELLYTTVNDE 42

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  V+  G    G+LG GS 
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S +L H        +  
Sbjct: 277 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVF 333

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 334 ACFATPAVTWRLLSV 348



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V   G+V+ +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 178/382 (46%), Gaps = 42/382 (10%)

Query: 62  GVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           G V+S G +  G +   T + +   P+P+ S   + + Q A G     L++  G+V+ + 
Sbjct: 236 GEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWE 295

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---- 176
           +++ G   +G+Q    V  P+LVE L    +   A G + T  +S  G ++T  WG    
Sbjct: 296 EEAGGRLGHGIQVD--VCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFT--WGDGIH 351

Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
           N   LGH ++ +   P  + G +E + V+ +A G  +  ALA   +   +++ G G  G 
Sbjct: 352 NVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG-TWHSALAT--ANGKLFTFGDGAFGV 408

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA----VVGQDG------RVCTWGWG 286
           LGHG R    +P+ ++   L  L+ + VA G WH      V+ Q G      ++ TWG G
Sbjct: 409 LGHGDRESVSYPKEVK--MLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDG 466

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
               LGHGN+E   +P  V +L D     +A G   T  ++  G V++ G      LG +
Sbjct: 467 DKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLG-S 525

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
           + +DG+         P LV   + V E V +IS  +      H   LT   +++ +G G 
Sbjct: 526 SNSDGK--------LPCLVQD-RLVGEFVEEISCGDH-----HVAVLTSRSEVFTWGKGS 571

Query: 407 KGQLGIELVNNQTERGNPERVD 428
            G+LG     ++ +R  P  V+
Sbjct: 572 NGRLG---HGDKDDRKTPTLVE 590



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 154/322 (47%), Gaps = 43/322 (13%)

Query: 110 ISDAGQVYAFGKD-SFGEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVL 164
           I   G VY +G+  S G +  GV  +  V      P+ +ES   + V Q A G    A++
Sbjct: 226 IESLGDVYVWGEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALV 285

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSG 223
           +R+G V+T+      RLGH  + +   P  +    L NI  V  A G  +  A++   + 
Sbjct: 286 TRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFV--ACGEYHTCAVS---TS 340

Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
             +++ G G+   G LGHGS      P+ +    +  LQ + VA G WH+A+   +G++ 
Sbjct: 341 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG-PVEGLQVLSVACGTWHSALATANGKLF 399

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGD 331
           T+G G +G LGHG+ E  S PK V+ L+ +K + VA G + T  + E             
Sbjct: 400 TFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRK 459

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           ++++G G+   LGH       GN+   +L P  V+SL  ++    QI+         HTF
Sbjct: 460 LFTWGDGDKNRLGH-------GNKETYLL-PTCVSSL--IDYNFNQIAC-------GHTF 502

Query: 392 --ALTESGKLYAFGAGDKGQLG 411
             ALT SG ++  G    GQLG
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLG 524



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 141/346 (40%), Gaps = 35/346 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS   T+ G +++FG  + G LGHG  E    P+ ++ L G++ ++ A G   T+ I
Sbjct: 385 GTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444

Query: 111 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                     + + +++ +G        +G + T L+  P  V SL +    Q A G+ F
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL--PTCVSSLIDYNFNQIACGHTF 502

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           T  L+  G V+T    +  +LG       + P  +   L    V +I+ G  ++  L   
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQDRLVGEFVEEISCGDHHVAVLT-- 559

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
            S   V++ G G  G+LGHG + D K P L+E  +  +++ +       ++   H  V G
Sbjct: 560 -SRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSICIHKWVSG 618

Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTT 323
            D  VC+       +   R+ C   G   C +       K   A    K   V    YT 
Sbjct: 619 ADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTK 678

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
               E G  Y+       S       DG G    ++ + +++ S K
Sbjct: 679 LKAGESG--YNSNVANRNSTTPTRSLDGTGRPDRDIRSSRILLSPK 722



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 147/341 (43%), Gaps = 37/341 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H   VT +G V+++   + G+LGHG   +  RP+ +  L    I   A G   
Sbjct: 274 QIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYH 333

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLKNIFVVQAAIG 157
           T  +S +G ++ +G    G    G+ G          K V+ P  VE L+   V+  A G
Sbjct: 334 TCAVSTSGDLFTWGD---GIHNVGLLGHGSDLSHWIPKRVSGP--VEGLQ---VLSVACG 385

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            + +A+ +  G+++TF  G    LGH    +   P   +  L  +  +++A G  + +A+
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKE-VKMLSGLKTLKVACGVWHTVAI 444

Query: 218 A-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
                      S   +++ G G   +LGHG++     P  +      N     +A G   
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQ--IACGHTF 502

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSED 329
              +   G V T G   +G LG  N + + +P +VQ  L       ++ GD+   V++  
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNSDGK-LPCLVQDRLVGEFVEEISCGDHHVAVLTSR 561

Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
            +V+++G G +  LGH    D +        TP LV +L++
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRK--------TPTLVEALRE 594


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 16/315 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  V+ IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G++  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H+       +  
Sbjct: 301 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVF 357

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 358 ACFATPAVTWRLLSV 372



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG++Y +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF- 173
           Q+YA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY + 
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335

Query: 174 -SWGNDARLGHHT 185
              G    L HHT
Sbjct: 336 QCRGQSVILPHHT 348



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 42/381 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG  H++ + S G V+++G NSSGQLG G T    +P  +  L  I  +  A G G ++
Sbjct: 417 VAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSV 474

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +   G ++A+G +  G+   G+  T+ +  P     L +I  + A  G+  +  L   G
Sbjct: 475 AVGSDGGIWAWGDNRRGQLGIGITATREI--PVQATGLASISALAA--GDSHSLALRGNG 530

Query: 169 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            V+T  WG++A  +LG  T  +      + G  +   +  +AAG  + LAL    +   V
Sbjct: 531 SVWT--WGSNAYGQLGDGTAIDRATAAQVPGLTD---ITALAAGNHHSLALRNDGT---V 582

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G+LG G+ T  K P  +     +      V AG  H+  V  +G V  WG  
Sbjct: 583 WVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMR----AVEAGPAHSVAVHLNGTVWVWGNN 638

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            +G LG G     ++P  V  L  V A  VA G Y +  +  DG ++++G      LG+ 
Sbjct: 639 DFGQLGDGTVTSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNG 696

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                         T  + ++  QV      I+L      N H+ AL   G ++ +GA  
Sbjct: 697 --------------TSGIQSTPAQVPGLTGVIALAAG---NGHSLALRTDGTVWGWGANS 739

Query: 407 KGQLGIELVNNQTERGNPERV 427
            GQLG       T R  P +V
Sbjct: 740 FGQLGD---GTTTPRSTPTQV 757



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 162/396 (40%), Gaps = 55/396 (13%)

Query: 45  NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           N   +A   HS+A+ S G V+++G NS+GQLG GTT E  R  P++ L    +   AAGA
Sbjct: 254 NGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTE--RATPVQVLGLTSVTALAAGA 311

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN------ 158
             ++ + D G V+A+G +S G+   G   T    +P  V  L ++  V A  G+      
Sbjct: 312 FHSLALRDDGTVWAWGNNSSGQLGDGT--TTARPTPVQVPGLTSVIAVAAGGGDDSLGMR 369

Query: 159 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY---- 213
              +  L  +G V+ + +    + G         P         + V ++  G       
Sbjct: 370 GDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTP---------VQVSELTGGTALVAGD 420

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           L A+  +  G  V++ G    G+LG G       P  +     +      +A G  H+  
Sbjct: 421 LHAVVLKSDGT-VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAI----TALATGDGHSVA 475

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           VG DG +  WG  R G LG G      +P     L  + A+  A GD  +  +  +G V+
Sbjct: 476 VGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLASISAL--AAGDSHSLALRGNGSVW 533

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTF 391
           ++G      LG     D    R      P L  +T+L   N                H+ 
Sbjct: 534 TWGSNAYGQLGDGTAID----RATAAQVPGLTDITALAAGNH---------------HSL 574

Query: 392 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           AL   G ++ +G+ D GQLG   V   T R  P +V
Sbjct: 575 ALRNDGTVWVWGSNDFGQLGDGTV---TSRKTPVQV 607



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 177/407 (43%), Gaps = 69/407 (16%)

Query: 33  FLLAGEACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
           F L   AC     + A++  G H++A+   G V+++G N SGQLG+GT  +  R  P++ 
Sbjct: 137 FTLTANACP----APAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATD--RATPVQV 190

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
                ++  AA    ++ +   G V+A+G + +G+   G +  +  T+P  V  L  +  
Sbjct: 191 PGLTSVMAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQR--TTPVQVLGLAGVTA 248

Query: 152 VQAAIGNFFTAVLS-------REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
           + AA GN  T  +S        +G V+  +WG+++  +LG  T      P  +LG     
Sbjct: 249 L-AAGGNGTTVAISAHSLALRSDGTVW--AWGDNSAGQLGDGTTTERATPVQVLGLTS-- 303

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V  +AAG  + LAL    +   V++ G    G+LG G+ T    P      Q+  L  V
Sbjct: 304 -VTALAAGAFHSLALRDDGT---VWAWGNNSSGQLGDGTTTARPTP-----VQVPGLTSV 354

Query: 263 V-VAAGAW---------HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           + VAAG           H+  +  DG V  WG+      G G     + P  V  L    
Sbjct: 355 IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGT 414

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
           A+    GD    V+  DG V+++G   S  LG               +TP        V 
Sbjct: 415 AL--VAGDLHAVVLKSDGTVWAWGDNSSGQLGEG-------------VTP--------VR 451

Query: 373 ERVVQIS----LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            + +Q+S    +T     + H+ A+   G ++A+G   +GQLGI + 
Sbjct: 452 AKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGIT 498



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 159/372 (42%), Gaps = 46/372 (12%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-- 111
           HS+A+ S G V+++G N  GQLG GT  +   P  +  L G+  + AA G G T+ IS  
Sbjct: 205 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTAL-AAGGNGTTVAISAH 263

Query: 112 -----DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
                  G V+A+G +S G+   G   T    +P  V  L ++  + A  G F +  L  
Sbjct: 264 SLALRSDGTVWAWGDNSAGQLGDGT--TTERATPVQVLGLTSVTALAA--GAFHSLALRD 319

Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL-----LALAC 219
           +G V+  +WGN++  +LG  T      P  + G L ++  V    G   L      +LA 
Sbjct: 320 DGTVW--AWGNNSSGQLGDGTTTARPTPVQVPG-LTSVIAVAAGGGDDSLGMRGDHSLAL 376

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           +  G  V++ G  L  + G G       P  + +          + AG  HA V+  DG 
Sbjct: 377 KSDGT-VWAWGYNLSRQFGDGMPATRTTPVQVSELT----GGTALVAGDLHAVVLKSDGT 431

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           V  WG    G LG G     + P  V  L  + A+  ATGD  +  V  DG ++++G   
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSVAVGSDGGIWAWGDNR 489

Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
              LG    A  +         P   T L  ++              ++H+ AL  +G +
Sbjct: 490 RGQLGIGITATRE--------IPVQATGLASISALAAG---------DSHSLALRGNGSV 532

Query: 400 YAFGAGDKGQLG 411
           + +G+   GQLG
Sbjct: 533 WTWGSNAYGQLG 544



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 157/364 (43%), Gaps = 39/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+++GSN+ GQLG GT  +      +  L  I  +  AAG   ++ 
Sbjct: 518 AGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITAL--AAGNHHSLA 575

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G V+ +G + FG+   G   ++   +P  V  L  +  V+A  G   +  +   G 
Sbjct: 576 LRNDGTVWVWGSNDFGQLGDGTVTSR--KTPVQVSGLSAMRAVEA--GPAHSVAVHLNGT 631

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+   WGN+   +LG  T  +   P  + G      V  +A G  + LAL    +   ++
Sbjct: 632 VWV--WGNNDFGQLGDGTVTSRAMPVQVSGLTG---VTAVAVGVYHSLALRNDGT---LW 683

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+G+   +  P  +     +    + +AAG  H+  +  DG V  WG   
Sbjct: 684 AWGYNNVGQLGNGTSGIQSTPAQVPGLTGV----IALAAGNGHSLALRTDGTVWGWGANS 739

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           +G LG G     S P  V  L +V A++   G + T  +  +  V+ +G   +  LG   
Sbjct: 740 FGQLGDGTTTPRSTPTQVPGLTNVIALNA--GAFYTVALRSERSVWEWGSKSAGQLGDGT 797

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
           +            TP  V+ L  V               NAH  AL     ++A+G   +
Sbjct: 798 VT--------QKTTPVQVSGLTDVTALAAG---------NAHALALRTDRTVWAWGGNQR 840

Query: 408 GQLG 411
           GQ+G
Sbjct: 841 GQIG 844



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 167/420 (39%), Gaps = 92/420 (21%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG---- 105
           AG  HS+A+   G V+++G+NSSGQLG GTT    RP P++      +I  AAG G    
Sbjct: 309 AGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGGDDSL 366

Query: 106 -----RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
                 ++ +   G V+A+G +   +   G+  T+  T+P  V  L     + A  G+  
Sbjct: 367 GMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATR--TTPVQVSELTGGTALVA--GDLH 422

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG--------------------- 197
             VL  +G V+  +WG+++  +LG    P   +P  + G                     
Sbjct: 423 AVVLKSDGTVW--AWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDG 480

Query: 198 ------------------TLENIPV--------VQIAAGYCYLLALACQPSGMAVYSVGC 231
                                 IPV          +AAG  + LAL    S   V++ G 
Sbjct: 481 GIWAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGS---VWTWGS 537

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G+LG G+  D      +     +      +AAG  H+  +  DG V  WG   +G L
Sbjct: 538 NAYGQLGDGTAIDRATAAQVPGLTDI----TALAAGNHHSLALRNDGTVWVWGSNDFGQL 593

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G G       P  V  L+ ++A+    G   +  V  +G V+ +G  +   LG     DG
Sbjct: 594 GDGTVTSRKTPVQVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLG-----DG 646

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                A    P  V+ L  V    V       +Y   H+ AL   G L+A+G  + GQLG
Sbjct: 647 TVTSRA---MPVQVSGLTGVTAVAV------GVY---HSLALRNDGTLWAWGYNNVGQLG 694



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 18/254 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AGP HS+AV   G V+ +G+N  GQLG GT      P  +  L G+  +  A G   ++ 
Sbjct: 618 AGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYHSLA 675

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + + G ++A+G ++ G+   G  G +  ++P  V  L  +  + A  GN  +  L  +G 
Sbjct: 676 LRNDGTLWAWGYNNVGQLGNGTSGIQ--STPAQVPGLTGVIALAA--GNGHSLALRTDGT 731

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +  +LG  T      P  + G L N  V+ + AG  Y +AL  + S   V+  
Sbjct: 732 VWGWGANSFGQLGDGTTTPRSTPTQVPG-LTN--VIALNAGAFYTVALRSERS---VWEW 785

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T +  P      Q+  L  V  +AAG  HA  +  D  V  WG  + 
Sbjct: 786 GSKSAGQLGDGTVTQKTTP-----VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQR 840

Query: 289 GCLGHGNEECESVP 302
           G +G G       P
Sbjct: 841 GQIGDGTASIMPAP 854


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L +I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 21/297 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L  I+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ VV I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313

Query: 285 WGRYGCLGHGNEECES----VPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSF 335
            G        + E  +    +  ++ A +  DV+  H+  G Y  FV +    +  F
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQVSIILF 370



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL +I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 20/225 (8%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    +   V S G    G+LG       + P  I+  + L +   +
Sbjct: 25  LLQAASGERHSLLLL---TNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVD--L 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG G  G LG G  +E    PK +  LND+K I V+ G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +S+D  V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SLALSKDSQVFSWGKNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
                AH+FAL+  G  + +G+   GQL +   N   +   P  V
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L +++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  V +LK +   VV IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            AHT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326


>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
 gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
          Length = 575

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 57/389 (14%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDA 113
           I+V  K  VY++G+N   QLG    +E+    P  +  +  ++     AG G T ++++ 
Sbjct: 173 ISVEKKTTVYAWGANRYSQLGGINLKEDTVLVPTVNEIMSNLKPNMMTAGLGCTFIVTND 232

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G +Y  G    G    G     ++  P  ++    +F+ + A        L+  G     
Sbjct: 233 GCIYVCGHGQDGRLGLGTVNHVVIPRPIHLK----VFITKVASFYCGQHALALTGNGIVL 288

Query: 174 SWGND--ARLGHH------------------TEPND---------VEPHPLLGTLENIPV 204
           SWG++   +LGH                   ++P           +E + ++ T+ +  +
Sbjct: 289 SWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVIDTISSKHI 348

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V IA G     + A       +++ GCG  G LGHG     K P+ +E F+  ++    V
Sbjct: 349 VDIACG---SDSSAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEAFKDYHVSK--V 403

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
           A G WH   +    R+ +WG G YG LG+G       P +V+ L  +    V  G   +F
Sbjct: 404 ACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWDISF 463

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTN 382
            +S+DG ++S+        G+N   D   N  + ++   PQL+  L   ++++V +  + 
Sbjct: 464 ALSQDGYIWSW--------GYN--GDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGAS- 512

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               N H  AL   G+LY +GA DKG+LG
Sbjct: 513 ----NCHCVALAADGELYLWGANDKGRLG 537



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 37/293 (12%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHG-----------TTEEEWRPRP-------------- 88
           H++A+T  G+V S+GSN  GQLGHG           T       +P              
Sbjct: 277 HALALTGNGIVLSWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMES 336

Query: 89  ---IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
              I ++    I+  A G+  +  ISD+G+++ +G    G   +G   T+    P+ VE+
Sbjct: 337 YMVIDTISSKHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGHG--DTETYKLPKKVEA 394

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
            K+  V + A G +    +  + R++++  G+  +LG+    N ++P  L+  L +I   
Sbjct: 395 FKDYHVSKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQP-ILVEQLPHILWA 453

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           ++  G+    AL+       ++S G      +   SR     P+L+ +    + + V + 
Sbjct: 454 KVICGWDISFALS---QDGYIWSWGYNGDFMVNECSRLIVDEPQLLYRLADQDKKIVDLG 510

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHV 316
           A   H   +  DG +  WG    G LG+G++  +C + PK   AL DVK  H+
Sbjct: 511 ASNCHCVALAADGELYLWGANDKGRLGNGSDIKDC-NFPKPCTALADVKLTHL 562



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 5/152 (3%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  H +A+ ++  ++S+G    GQLG+G +    +P  +  L  I   +   G  
Sbjct: 401 SKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWD 460

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAV 163
            +  +S  G ++++G +  G+         +V  PQL+  L  ++  +V     N     
Sbjct: 461 ISFALSQDGYIWSWGYN--GDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGASNCHCVA 518

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVE-PHP 194
           L+ +G +Y +   +  RLG+ ++  D   P P
Sbjct: 519 LAADGELYLWGANDKGRLGNGSDIKDCNFPKP 550


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 149/342 (43%), Gaps = 40/342 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     L +  G+V+ +G   +G    G +    ++SP++V+S
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGR--LGQKIDMDISSPKIVDS 352

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
           L  + V   A G + T  L+  G VYT  WGND      L      +   P  L G+L+ 
Sbjct: 353 LNGLHVKNVACGEYHTCALTDSGEVYT--WGNDVCCADLLIEGRTRSQWIPQKLGGSLDG 410

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I +  +A G  +   ++   S   +++ G G  G LGHG       P+ +E    L ++ 
Sbjct: 411 ISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRS 467

Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
              A G+WH A + +            G++ TWG G  G LGH +   + VP  V  L D
Sbjct: 468 A--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVD 525

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
              + V+ G   T  ++  G V++ G  +   L         GN HA     + V    Q
Sbjct: 526 YDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL---------GNPHAR---DKAVMVEGQ 573

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           + +  V++  T S     H   LT  G +Y +G G+ GQLG+
Sbjct: 574 LKQEFVKVISTGSY----HVAVLTSGGSVYTWGRGENGQLGL 611



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 23/291 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+T  G VY++G++   +  L  G T  +W P+ +  SL GI I   A G   T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHT 423

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            ++S  G+++ +G  +FG   +G    +  +SP+ VESL  + V  AA G++ TA +   
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEV 481

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                   S  G+++T+  G++ RLGH    + + P   +  L +   VQ++ G    +A
Sbjct: 482 MFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQLVDYDFVQVSCGRMLTVA 540

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    +   V+++G    G+LG+    D+    ++ + QL      V++ G++H AV+  
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHARDKA---VMVEGQLKQEFVKVISTGSYHVAVLTS 594

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            G V TWG G  G LG G+ E    P  V+AL D +   +  G   T  +S
Sbjct: 595 GGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 25/254 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+  V+S G ++++G  + G LGHG       P+ + SL G+R+  AA G+ 
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSW 473

Query: 106 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            T  I           S +G+++ +G    G   +   G+KLV  P  V  L +   VQ 
Sbjct: 474 HTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV--PTRVTQLVDYDFVQV 531

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQIAAGYCY 213
           + G   T  L+  G+V+       A+ G    P+  +   ++ G L+   V  I+ G  +
Sbjct: 532 SCGRMLTVALTNMGKVFAM---GSAKYGQLGNPHARDKAVMVEGQLKQEFVKVISTGSYH 588

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 268
           +  L    SG +VY+ G G  G+LG G   D   P  +E     Q   +   P   AA +
Sbjct: 589 VAVLT---SGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645

Query: 269 WHAAVVGQDGRVCT 282
            H  +   D   CT
Sbjct: 646 LHKPISISDQSTCT 659


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 25/352 (7%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
            Q I G   +  + + G V + G  S G+LG G +++      I +LQG    +++ +   
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2715

Query: 104  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+   VVQ + G   +AV
Sbjct: 2716 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2773

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-------IAAGYCYLLA 216
            ++ +G+++TF  G+  RLG     N   P  +   LE   + Q       +A G  + LA
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSYSVACGLNHTLA 2832

Query: 217  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            ++    G  V++ G G  GKLG G+ T +  P+ ++    + ++   VA G   +  + +
Sbjct: 2833 VST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTK 2888

Query: 277  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            DG V T+G  R   L  G     + P+ V  L  V    VA G   T  ++  GDVY++G
Sbjct: 2889 DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 2948

Query: 337  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
                  LG      G  N   +V  P LVT L+  N R +     +S  W A
Sbjct: 2949 SNSEGQLGL-----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 2992



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 30/250 (12%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VTS G +++FG+   G+LG G T  +  P  + +L+G +I
Sbjct: 2754 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2813

Query: 98   IQA-------AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
             QA       A G   T+ +S D   V+AFG   +G+   G    K  +SPQ V+ L  I
Sbjct: 2814 GQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGI 2871

Query: 150  FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENI 202
             + + A G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     +
Sbjct: 2872 GIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GV 2923

Query: 203  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
             +  +A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++  
Sbjct: 2924 VIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ- 2979

Query: 263  VVAAGAWHAA 272
             ++AG  H+A
Sbjct: 2980 -ISAGRCHSA 2988



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 30/331 (9%)

Query: 99   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2713

Query: 158  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 2714 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2771

Query: 216  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-----QPVVVAAGAWH 270
              A   S   +++ G G  G+LG G+ +++K P  +   +   +     +   VA G  H
Sbjct: 2772 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNH 2829

Query: 271  AAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
               V  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++D
Sbjct: 2830 TLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 2889

Query: 330  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            G VY+F  G+   +G   + +G+   H     PQ V  L  V    V +          H
Sbjct: 2890 GHVYTF--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEH 2934

Query: 390  TFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            T AL  +G +YA+G+  +GQLG+   N+  E
Sbjct: 2935 TLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2965



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 37/216 (17%)

Query: 229  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 2674 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2733

Query: 286  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 2734 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2791

Query: 346  NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNA---------HTFALT 394
                 G GN  +N   P+ VT+L+  Q+ +            WN          HT A++
Sbjct: 2792 -----GLGNT-SNKKLPERVTALEGYQIGQ-----------AWNKSYSVACGLNHTLAVS 2834

Query: 395  ESGKL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 429
              G + +AFG GD G+LG+    N T + +P++VD+
Sbjct: 2835 TDGSMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 2867


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLTVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G ++S G  A++       +N   P  V +LK +   VV IS  +    
Sbjct: 197 SLCGT--SFGWGSNSS-GQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            AHT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNSSGQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G  R G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  V AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLTVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G ++S G  A++       +N   P  V +LK +   VV IS  +    
Sbjct: 197 SLCGT--SFGWGSNSS-GQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
            AHT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNSSGQL   G     +  +P  + +L+ + ++  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 133/282 (47%), Gaps = 18/282 (6%)

Query: 30  VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
           +++ L   +A  RR       G  HS+A+TS G VYS+GS   G+LGHG   +   PR I
Sbjct: 283 LVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKI 342

Query: 90  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LK 147
            +L   RI   + G   T ++SD   V+ FG+   G    G+  TK   +PQ V +   +
Sbjct: 343 MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNG--RLGLGDTKCHDTPQEVPTWGFR 400

Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIP 203
              +++   G  FT  LS EGRV  FSWG  +     LG   + +++ P  +   L+N  
Sbjct: 401 KQRIIKVVCGWNFTIALSLEGRV--FSWGKQSEGQCGLG-FCDQDELSPCLIEKLLDN-R 456

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQP 261
           +V +A GY + LAL  Q     V S G G  G+LG G    +  P  I+Q  F      P
Sbjct: 457 IVDVACGYTHSLALTSQ---HEVLSWGLGEYGQLGRGI-VYQPSPESIDQSLFACEGGHP 512

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
             +  GA+H+ +      +  WG   YG  G G+     +P+
Sbjct: 513 QRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPE 554



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 137/311 (44%), Gaps = 36/311 (11%)

Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
           G   T  + +PQ V+ L    + + A G      LS  G VY+     D  +   TEP +
Sbjct: 221 GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS---SEDHAIST-TEPTN 276

Query: 190 VEPHPLL-------GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
           +   P L         L   P++ IA G  + +AL    S   VYS G G  G+LGHG  
Sbjct: 277 MLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALT---SAGEVYSWGSGEDGRLGHGEM 333

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            D   PR I    LL  +   V+ G  H AVV     V T+G GR G LG G+ +C   P
Sbjct: 334 RDRNVPRKI--MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP 391

Query: 303 KVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           + V        + I V  G   T  +S +G V+S+G       G        G    + L
Sbjct: 392 QEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCG-------LGFCDQDEL 444

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +P L+  L  ++ R+V ++   +     H+ ALT   ++ ++G G+ GQLG  +V     
Sbjct: 445 SPCLIEKL--LDNRIVDVACGYT-----HSLALTSQHEVLSWGLGEYGQLGRGIVY---- 493

Query: 421 RGNPERVDIDL 431
           + +PE +D  L
Sbjct: 494 QPSPESIDQSL 504



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 15/266 (5%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE- 144
           P+ +  L G  I + A G    + +S AG VY+    S   A    + T ++ +PQLV+ 
Sbjct: 231 PQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS----SEDHAISTTEPTNMLQTPQLVKE 286

Query: 145 -----SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
                +L    ++  A G   +  L+  G VY++  G D RLGH    +   P  ++  L
Sbjct: 287 LTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALL 346

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
            +  +  ++ G  +   ++ Q     V++ G G  G+LG G       P+ +  +     
Sbjct: 347 RH-RIEYVSCGGSHTAVVSDQ---NLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQ 402

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVAT 318
           + + V  G      +  +GRV +WG    G  G G  ++ E  P +++ L D + + VA 
Sbjct: 403 RIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVAC 462

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLG 344
           G   +  ++   +V S+G GE   LG
Sbjct: 463 GYTHSLALTSQHEVLSWGLGEYGQLG 488


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 16/315 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  V+ IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G++  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H+       +  
Sbjct: 277 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVF 333

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 334 ACFATPAVTWRLLSV 348



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 16/243 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T+ G V+++G N+  QLG+GTT     P  I + L   ++I+ A G+  ++
Sbjct: 83  SGP-HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 141

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+V+A+G ++ G+   G    + +  P+ V   L+N  V+  A G   +  +   
Sbjct: 142 VLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKVVMNIACGQMCSMAVVDT 199

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A GY + L L  +     +
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ---I 254

Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           Y+ G    G+LG G+++++ +P   ++E+ +++    +     A  +A   Q G V  WG
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE---IAACHSAHTSAAKTQGGHVYMWG 311

Query: 285 WGR 287
             R
Sbjct: 312 QCR 314



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 127 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 186

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 187 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 244

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG++Y +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 245 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 291



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D G
Sbjct: 193 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF- 173
           Q+YA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY + 
Sbjct: 253 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 311

Query: 174 -SWGNDARLGHHT 185
              G    L HHT
Sbjct: 312 QCRGQSVILPHHT 324



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 259

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274


>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
          Length = 443

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 170/384 (44%), Gaps = 50/384 (13%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           IA P H   VT  GVV + G    GQLG G    E     + ++   +I+ A AG   T+
Sbjct: 47  IAHPSHP-DVTVTGVVLACGEGDVGQLGLGPDVMEKSRPALVNIDDQKIVSAVAGGMHTV 105

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +++ G+VY FG +  G            T P  V+ L     +Q + G+  TAVL+ EG
Sbjct: 106 CLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDLLGR--GIQLSAGDSHTAVLTDEG 163

Query: 169 RVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSG 223
           +V  F+WGN  DA        + ++  P    +E +P   V++IA+G  +LL   C    
Sbjct: 164 KV--FAWGNFRDANGKIGLTSDGIQEKP----IEMLPGETVIKIASGGDHLL---CLTEK 214

Query: 224 MAVYSVGCGLGGKLG--------HGSRTDEKH---PRLIEQFQLLNLQPVV---VAAGAW 269
             +YS GC   G+LG         G R    +   P +I   +  + + VV   V AG +
Sbjct: 215 GEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQY 274

Query: 270 HAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVVS 327
            +    +D G +  WG   Y  LG  + E + VP  V+A++ DVK   V  G +    + 
Sbjct: 275 MSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICLD 334

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
             G VY+ G GE   LGH     G  N    V     +   KQV                
Sbjct: 335 TAGKVYTVGRGEYGRLGH-----GDSNEEKRVPAILDLPPCKQV------------AAGQ 377

Query: 388 AHTFALTESGKLYAFGAGDKGQLG 411
           A ++A+T SG++YA+G G   QLG
Sbjct: 378 AVSYAVTNSGEIYAWGMGTSQQLG 401



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 28/346 (8%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           A+AG  H++ +T+KG VY+FG N  G LG  T+EE     P +     R IQ +AG   T
Sbjct: 97  AVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDLLGRGIQLSAGDSHT 156

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +++D G+V+A+G       + G+    +   P  +E L    V++ A G      L+ +
Sbjct: 157 AVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKP--IEMLPGETVIKIASGGDHLLCLTEK 214

Query: 168 GRVYTFSWGNDARLGHHTEPNDVE----------PHPLLGTLENIPVVQIAAGYCY---L 214
           G +Y+       +LG   E   V              ++  L +    ++     Y    
Sbjct: 215 GEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQY 274

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           ++ A +    ++Y+ G     +LG     ++  P  ++     +++  +V AG  HA  +
Sbjct: 275 MSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMS-EDVKVTMVDAGQHHAICL 333

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVY 333
              G+V T G G YG LGHG+   E   K V A+ D+     VA G   ++ V+  G++Y
Sbjct: 334 DTAGKVYTVGRGEYGRLGHGDSNEE---KRVPAILDLPPCKQVAAGQAVSYAVTNSGEIY 390

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           ++G G S  LG     D        V TPQL+T  +    +V+ +S
Sbjct: 391 AWGMGTSQQLGSGDDED--------VTTPQLITGKQLQTRKVIAVS 428



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 26/301 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  H+  +T +G V+++G+        G T +  + +PI  L G  +I+ A+G   
Sbjct: 148 QLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEMLPGETVIKIASGGDH 207

Query: 107 TMLISDAGQVYAFGKDSFGE---------AEYGVQGTKLVTSPQLVESL-----KNIFVV 152
            + +++ G++Y+ G    G+            G +G   +  P ++  L     K +   
Sbjct: 208 LLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFD 267

Query: 153 QAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
               G + +    ++ G +Y +   N  +LG +   N   P  +    E++ V  + AG 
Sbjct: 268 DVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQ 327

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWH 270
            + +   C  +   VY+VG G  G+LGHG   +EK    I     L+L P   VAAG   
Sbjct: 328 HHAI---CLDTAGKVYTVGRGEYGRLGHGDSNEEKRVPAI-----LDLPPCKQVAAGQAV 379

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVVSE 328
           +  V   G +  WG G    LG G++E  + P+++  + L   K I V+ G   T +++ 
Sbjct: 380 SYAVTNSGEIYAWGMGTSQQLGSGDDEDVTTPQLITGKQLQTRKVIAVSGGGQHTVLLAT 439

Query: 329 D 329
           D
Sbjct: 440 D 440



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 23/235 (9%)

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
           P L  +++  +V   AG  + +   C  +   VY+ GC   G LG  + ++E    L  +
Sbjct: 84  PALVNIDDQKIVSAVAGGMHTV---CLTNKGEVYTFGCNDEGALGRNT-SEEGSETLPSK 139

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-----GRYGCLGHGNEECESVPKVVQAL 308
             LL  + + ++AG  H AV+  +G+V  WG      G+ G    G +E     K ++ L
Sbjct: 140 VDLLG-RGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQE-----KPIEML 193

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGNRHA--NVLTPQLV 365
                I +A+G      ++E G++YS GC E   LG  A     +G R     +L P ++
Sbjct: 194 PGETVIKIASGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAII 253

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTE--SGKLYAFGAGDKGQLGIELVNNQ 418
             L+  +++ V   + + +Y   +     E  +G +YA+G  +  QLG   + N+
Sbjct: 254 RCLRHKSKKRV---VFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENK 305


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 34/265 (12%)

Query: 173 FSWG--NDARLGHHTEPND--------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           F WG  +D +LG  T P +        + P    G LE     +I A   Y +++  + +
Sbjct: 24  FVWGCSDDWQLGIETGPKNYQISDPVQITPDYWQGKLE-----KIYAQSNYSMSIDTKGN 78

Query: 223 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
              V+S G G  G+LG+      +K+P++IE F + N+    +A G  H+A     G++ 
Sbjct: 79  ---VFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLY 135

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG G  G LGHG+ + E +PK V+   D++ + +A GD  T  +     VY +G  ++ 
Sbjct: 136 TWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAG 195

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LG   +        + V  P+ +    Q  + VVQI          H+ ALT  G++Y+
Sbjct: 196 QLGFQDL--------SRVNLPKKIMFFNQ--KEVVQIQCGKK-----HSIALTVEGQVYS 240

Query: 402 FGAGDKGQLGIELVNNQTERGNPER 426
           +G+ + GQLGI+L     +   PE+
Sbjct: 241 WGSNEYGQLGIQLGKQSGKMTCPEQ 265



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQ 153
           ++ +  A +  +M I   G V+++G   FG   Y  +  K    P+++E  S++NI V +
Sbjct: 59  KLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGY-EKDVKYQKYPKIIETFSIQNIIVTK 117

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            A+G   +A  + +G++YT+  G + +LGH +  N+  P   +   ++I V++IA G  +
Sbjct: 118 IALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKK-VKEFQDIRVLEIACGDSH 176

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
            +A+    SG  VY  G    G+LG    +    P+ I      N + VV +  G  H+ 
Sbjct: 177 TMAII---SGNLVYGWGFNQAGQLGFQDLSRVNLPKKI---MFFNQKEVVQIQCGKKHSI 230

Query: 273 VVGQDGRVCTWGWGRYGCLG 292
            +  +G+V +WG   YG LG
Sbjct: 231 ALTVEGQVYSWGSNEYGQLG 250



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS A T++G +Y++G   +GQLGHG+ + E  P+ ++  Q IR+++ A G   TM I
Sbjct: 121 GTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAI 180

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
                VY +G +  G+   G Q    V  P+ +       VVQ   G   +  L+ EG+V
Sbjct: 181 ISGNLVYGWGFNQAGQL--GFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQV 238

Query: 171 YTFSWGND 178
           Y  SWG++
Sbjct: 239 Y--SWGSN 244



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIR--SLQGIRIIQAAAGAGR 106
           A   +S+++ +KG V+S+GS   G+LG+    + +  P+ I   S+Q I + + A G   
Sbjct: 65  AQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHH 124

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +   ++ G++Y +G+   G+  +G    + +  P+ V+  ++I V++ A G+  T  +  
Sbjct: 125 SAACTNQGKLYTWGQGVNGQLGHGSNQNEEI--PKKVKEFQDIRVLEIACGDSHTMAIIS 182

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
              VY + +    +LG         P  ++       VVQI  G  + +AL  +     V
Sbjct: 183 GNLVYGWGFNQAGQLGFQDLSRVNLPKKIM-FFNQKEVVQIQCGKKHSIALTVEGQ---V 238

Query: 227 YSVGCGLGGKLG 238
           YS G    G+LG
Sbjct: 239 YSWGSNEYGQLG 250



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++A+ S  +VY +G N +GQLG         P+ I       ++Q   G   ++ +
Sbjct: 173 GDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIAL 232

Query: 111 SDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLV 143
           +  GQVY++G + +G+   + G Q  K+    Q +
Sbjct: 233 TVEGQVYSWGSNEYGQLGIQLGKQSGKMTCPEQQI 267


>gi|294901417|ref|XP_002777367.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
           50983]
 gi|239884950|gb|EER09183.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
           50983]
          Length = 359

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 160/372 (43%), Gaps = 47/372 (12%)

Query: 61  KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
            G VY+FGS +SGQLGHG   +E +P  + SL  IR++  A G   T+ +   G V+  G
Sbjct: 3   DGRVYTFGSGTSGQLGHGVLRDEPQPLLVSSLSRIRLVAVACGDRHTLFLGVTGLVFGTG 62

Query: 121 KDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +++FG  +      +  +SP+   V+S  +I  +    G   + VL   GRV  F W   
Sbjct: 63  RNTFG--QLACDDLRDFSSPRRIDVDSCGSI-PIDVRCGGDHSMVLLANGRVVAFGWNAF 119

Query: 179 ARLG---HH--TEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLALACQPSGMAVYS 228
            +LG    H  T P      P   TL N P      V I+ G+ + L LA       VYS
Sbjct: 120 GQLGIGISHLGTTPVSAISSP---TLVNPPGPGVRFVSISCGFAHSLLLA---DSGRVYS 173

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGR 287
            G G  G+LG+  R+    P LI       +    V+ G  H+ V+ G  G V  +G G 
Sbjct: 174 CGMGTHGQLGNDERSHCWVPTLIPTISRCTM----VSCGGHHSLVLCGPMGEVYAFGSGS 229

Query: 288 YGCLGHGNEECE-SVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            G LG G++  + S+P KV   L  V A+    G ++  +  +   +Y FG G    LG 
Sbjct: 230 TGKLGRGDDMGDTSIPVKVSGQLPPVAAV-CCGGAHSLVITRDKSALYGFGMGRRGQLG- 287

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               DG    H     P             V + +        HT A  ES     FG  
Sbjct: 288 ----DGLRRSHPLPTGP-------------VAVGVKCIAGGGYHTLAALESRGFIVFGRS 330

Query: 406 DKGQLGIELVNN 417
            +GQLG+  V +
Sbjct: 331 TRGQLGVGFVED 342



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 132/311 (42%), Gaps = 30/311 (9%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 112
           H++ +   G+V+  G N+ GQL      +   PR I     G   I    G   +M++  
Sbjct: 48  HTLFLGVTGLVFGTGRNTFGQLACDDLRDFSSPRRIDVDSCGSIPIDVRCGGDHSMVLLA 107

Query: 113 AGQVYAFGKDSFGEAEYGVQ--GT---KLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSR 166
            G+V AFG ++FG+   G+   GT     ++SP LV      +  V  + G   + +L+ 
Sbjct: 108 NGRVVAFGWNAFGQLGIGISHLGTTPVSAISSPTLVNPPGPGVRFVSISCGFAHSLLLAD 167

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV----QIAAGYCYLLALACQPS 222
            GRVY+   G   +LG     ND   H  + TL  IP +     ++ G  + L L C P 
Sbjct: 168 SGRVYSCGMGTHGQLG-----NDERSHCWVPTL--IPTISRCTMVSCGGHHSLVL-CGPM 219

Query: 223 GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQD-GR 279
           G  VY+ G G  GKLG G    D   P  +       L PV  V  G  H+ V+ +D   
Sbjct: 220 G-EVYAFGSGSTGKLGRGDDMGDTSIPVKVSG----QLPPVAAVCCGGAHSLVITRDKSA 274

Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
           +  +G GR G LG G      +P    A+  VK I  A G Y T    E      FG   
Sbjct: 275 LYGFGMGRRGQLGDGLRRSHPLPTGPVAVG-VKCI--AGGGYHTLAALESRGFIVFGRST 331

Query: 340 SASLGHNAIAD 350
              LG   + D
Sbjct: 332 RGQLGVGFVED 342



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 31/263 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--------QGIRIIQAAAGAG 105
           HS+ + + G V +FG N+ GQLG G +     P    S          G+R +  + G  
Sbjct: 101 HSMVLLANGRVVAFGWNAFGQLGIGISHLGTTPVSAISSPTLVNPPGPGVRFVSISCGFA 160

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++L++D+G+VY+ G  + G  + G         P L+ ++    +V    G+    +  
Sbjct: 161 HSLLLADSGRVYSCGMGTHG--QLGNDERSHCWVPTLIPTISRCTMVSCG-GHHSLVLCG 217

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
             G VY F  G+  +LG   +  D   P  + G L   PV  +  G  + L +    S  
Sbjct: 218 PMGEVYAFGSGSTGKLGRGDDMGDTSIPVKVSGQLP--PVAAVCCGGAHSLVITRDKS-- 273

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGR 279
           A+Y  G G  G+LG G R    HP        L   PV V     A G +H     +   
Sbjct: 274 ALYGFGMGRRGQLGDGLR--RSHP--------LPTGPVAVGVKCIAGGGYHTLAALESRG 323

Query: 280 VCTWGWGRYGCLGHGNEECESVP 302
              +G    G LG G  E  SVP
Sbjct: 324 FIVFGRSTRGQLGVGFVEDVSVP 346


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 25/337 (7%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
            Q + G   +  V + G V + G  S G+LG G +++      I S+QG  + Q A     
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 105  -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G T+ ++++G+V+++G   +G+  +G   +     P+ +E+L+   V+Q + G   +AV
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQLSCGFKHSAV 1952

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            ++ +G+++TF  G+  RLG  T  N   P  ++  LE+  +  +A G  + L ++    G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTLCVSAD--G 2009

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
              V++ G G  GKLG G+   +  P  I+  Q   ++   VA G   +  + + G+V TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKK--VACGTQFSVALSKYGKVFTW 2067

Query: 284  GWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            G  R   +G     G   C+  P+ V +L+      V  G   T V++ DGDV+ +G   
Sbjct: 2068 GQERL--IGQPDTRGGSNCQ--PQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNS 2123

Query: 340  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
               L       G G+ ++ V  PQLV  L   N R V
Sbjct: 2124 EGQL-------GLGHTNSPVREPQLVPCLTGKNIRQV 2153



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 131/315 (41%), Gaps = 65/315 (20%)

Query: 153  QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--- 209
            Q   G   T V+   G V     G+  RLG     +D+     + +++   V Q+A    
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNS-DDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 210  --GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
              G+     LA   SG  V+S G G  GKLGHG+   ++ PR IE  Q    + + ++ G
Sbjct: 1894 SDGH----TLAVTESG-EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ--GEEVIQLSCG 1946

Query: 268  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              H+AVV  DG++ T+G G YG LG G    + VP  V AL   +  +VA G   T  VS
Sbjct: 1947 FKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVS 2006

Query: 328  EDG-DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNS 383
             DG +V++FG G+   LG       QGN     L  ++      V ++V    Q S+  S
Sbjct: 2007 ADGTNVWAFGDGDFGKLG-------QGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS 2059

Query: 384  IY-----WN------------------------------------AHTFALTESGKLYAF 402
             Y     W                                      HT  LT  G ++ +
Sbjct: 2060 KYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGW 2119

Query: 403  GAGDKGQLGIELVNN 417
            G+  +GQLG+   N+
Sbjct: 2120 GSNSEGQLGLGHTNS 2134



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    E  Q   G  HS  VT+ G +++FG+   G+LG GTT  +  P  + +L+  +I
Sbjct: 1933 EALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQI 1992

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
               A G   T+ +S D   V+AFG   FG+   G    K +  P  +++L+   + + A 
Sbjct: 1993 GYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHL--PTKIKALQGHVIKKVAC 2050

Query: 157  GNFFTAVLSREGRVYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            G  F+  LS+ G+V+T  WG        D R G + +P +V       +L    +  +  
Sbjct: 2051 GTQFSVALSKYGKVFT--WGQERLIGQPDTRGGSNCQPQEV------ASLSGYFIEDVVC 2102

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLI 251
            G  + L L    S   V+  G    G+LG G + +  + P+L+
Sbjct: 2103 GAEHTLVLT---SDGDVWGWGSNSEGQLGLGHTNSPVREPQLV 2142



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 18/149 (12%)

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
            VV  +G V   G G YG LG GN +       + ++       +AT    D  T  V+E 
Sbjct: 1845 VVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTES 1904

Query: 330  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            G+V+S+G G+   LGH     G  +R      P+ + +L+   E V+Q+S         H
Sbjct: 1905 GEVFSWGDGDYGKLGH-----GNSDRQRR---PRQIEALQ--GEEVIQLSCGFK-----H 1949

Query: 390  TFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            +  +T  GKL+ FG GD G+LG+    N+
Sbjct: 1950 SAVVTADGKLFTFGNGDYGRLGLGTTTNK 1978


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 181/392 (46%), Gaps = 48/392 (12%)

Query: 33  FLLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR- 90
           F+L+    C    + A+A G  H++ +   G V+++G N  GQLG GTT    RP P++ 
Sbjct: 132 FVLSSSPTCI---APAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTN--RPVPVQV 186

Query: 91  -SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
             L GIR +  AA +  ++ + D G V+A+G +S G+   G    +L  +P  V  L +I
Sbjct: 187 GGLSGIRAV--AASSDHSLAVRDDGTVWAWGINSSGQLGDGTTNDRL--TPVQVAGLSSI 242

Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
             V A  G+ ++  +  +G V+ +   +  +LG  T  + + P  + G  E   VV+++A
Sbjct: 243 KRVAA--GDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSE---VVEVSA 297

Query: 210 GYCYLLA----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------LLNL 259
               LL     LA +  G  V++ G    G+LG G+ TD   P  + +        + N 
Sbjct: 298 AKYSLLGSAHVLAVRGDGT-VWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNS 356

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            P+  + G++  AV G DG V  WG    G LG G     S P  V AL+ + A+  A+ 
Sbjct: 357 FPLSNSNGSYSLAVRG-DGTVWAWGSNSTGQLGDGTTISRSRPAQVNALSGITAVS-ASS 414

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
           D+    + +DG V+S+G   +  LG            A+ L P  V  L  V       S
Sbjct: 415 DH-ALAMRDDGTVWSWGKNTNGKLGDETT--------AHRLIPVQVHGLSGVRSVAAGES 465

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    H+ ++ E GK +A+G    G LG
Sbjct: 466 ---------HSVSVREDGKAWAWGYRGMGLLG 488



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 18/296 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+AV + G ++++GSNS GQLG G+T     P P+  L+   ++ AAA    ++ 
Sbjct: 560 AGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLE--NVVGAAASFSVSLA 617

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +S G+   G   T   ++P  V  L +I  V  + G+     L  +G 
Sbjct: 618 LRSDGTVWAWGLNSVGQ--LGDGSTINRSTPGPVGGLVHIVGVATSGGHSL--ALRNDGT 673

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   +D +LG  T  N  +P  + G      +  + A    +++ A       V++ 
Sbjct: 674 VWAWGGNHDGQLGDGTTTNQPKPVQVSG------LSGVKAVAAAIVSSAVVRDNGTVWAW 727

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ TD   P L+     +      +A+G  H   +  DG V  WG   Y 
Sbjct: 728 GDNYSGQLGDGTTTDRLTPVLVSGLSGVK----ALASGNHHFLALRNDGTVWAWGDNYYS 783

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            LG G     S P  V+ L+DVK I  A G+  +  V +DG V+++G   S  LG+
Sbjct: 784 QLGDGTRTQRSTPVQVRGLSDVKLI--AAGENHSMAVRKDGTVWTWGLNTSGQLGN 837



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 54/398 (13%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           +AG +  +R      AG G+S+AV   G V+++G NSSGQLG GTT +   P  ++ L  
Sbjct: 236 VAGLSSIKR----VAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSE 291

Query: 95  IRIIQAAA----GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           +  + AA     G+   + +   G V+A+G +  G+   G    +L  +P  V  L  + 
Sbjct: 292 VVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRL--TPVQVSELDGVK 349

Query: 151 VVQAAIGNFF-------TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 201
            +  A+GN F       +  L+  G    ++WG+++  +LG  T  +   P   +  L  
Sbjct: 350 AI--AVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQ-VNALSG 406

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
           I  V  ++ +    ALA +  G  V+S G    GKLG     DE     +   Q+  L  
Sbjct: 407 ITAVSASSDH----ALAMRDDGT-VWSWGKNTNGKLG-----DETTAHRLIPVQVHGLSG 456

Query: 262 V-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
           V  VAAG  H+  V +DG+   WG+   G LG G      VP  VQ +       +A+  
Sbjct: 457 VRSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVP--VQTMGLTATAQIASHG 514

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             +  V ED  ++ +G   S+SLG      G G+  A+ +   ++  +K V         
Sbjct: 515 NRSLAVKEDNTLWVWG---SSSLGDL----GDGSTGAHPVPSSILDDVKAVAAG------ 561

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
                 N ++ A+  +G L+A+G+   GQLG     N+
Sbjct: 562 ------NDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNR 593



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 164/386 (42%), Gaps = 50/386 (12%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA------ 101
           ++ G  H +AV   G V+++G+N SGQLG GTT +   P  +  L G++ I         
Sbjct: 301 SLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLS 360

Query: 102 -AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
            +    ++ +   G V+A+G +S G+   G   ++  + P  V +L  I  V A+  +  
Sbjct: 361 NSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISR--SRPAQVNALSGITAVSASSDHAL 418

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLAL 217
              +  +G V+++    + +LG  T  + + P   H L G      V  +AAG  + +++
Sbjct: 419 --AMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSG------VRSVAAGESHSVSV 470

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
                  A    G GL   LG G+      P      Q + L     +A+    +  V +
Sbjct: 471 REDGKAWAWGYRGMGL---LGDGAMFLSFVP-----VQTMGLTATAQIASHGNRSLAVKE 522

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           D  +  WG    G LG G+     VP  +  L+DVKA  VA G+  +  V  +G ++++G
Sbjct: 523 DNTLWVWGSSSLGDLGDGSTGAHPVPSSI--LDDVKA--VAAGNDYSLAVRNNGSLWAWG 578

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                 LG  +          N LTP  V  L+ V       S+         + AL   
Sbjct: 579 SNSIGQLGDGST--------TNRLTPVPVNGLENVVGAAASFSV---------SLALRSD 621

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERG 422
           G ++A+G    GQLG     N++  G
Sbjct: 622 GTVWAWGLNSVGQLGDGSTINRSTPG 647



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 154/365 (42%), Gaps = 37/365 (10%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           +S+AV   G V+++GSNS+GQLG GTT    RP  + +L GI  + A+  +   + + D 
Sbjct: 366 YSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVNALSGITAVSAS--SDHALAMRDD 423

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+++GK++ G+        +L+  P  V  L  +  V A  G   +  +  +G+ + +
Sbjct: 424 GTVWSWGKNTNGKLGDETTAHRLI--PVQVHGLSGVRSVAA--GESHSVSVREDGKAWAW 479

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
            +     LG         P   +G        QIA+     LA+    +   ++  G   
Sbjct: 480 GYRGMGLLGDGAMFLSFVPVQTMGLTA---TAQIASHGNRSLAVKEDNT---LWVWGSSS 533

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G LG GS      P  I    L +++   VAAG  ++  V  +G +  WG    G LG 
Sbjct: 534 LGDLGDGSTGAHPVPSSI----LDDVK--AVAAGNDYSLAVRNNGSLWAWGSNSIGQLGD 587

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G+      P  V  L +V  +  A     +  +  DG V+++G      LG  +      
Sbjct: 588 GSTTNRLTPVPVNGLENV--VGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGST----- 640

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
               N  TP  V  L      +V ++ +       H+ AL   G ++A+G    GQLG  
Sbjct: 641 ---INRSTPGPVGGLVH----IVGVATS-----GGHSLALRNDGTVWAWGGNHDGQLGDG 688

Query: 414 LVNNQ 418
              NQ
Sbjct: 689 TTTNQ 693



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 16/190 (8%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           GHS+A+ + G V+++G N  GQLG GTT  + +P  +  L G++ + AA  +  + ++ D
Sbjct: 663 GHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIVS--SAVVRD 720

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            G V+A+G +  G+   G    +L  +P LV  L  +  +  A GN     L  +G V+ 
Sbjct: 721 NGTVWAWGDNYSGQLGDGTTTDRL--TPVLVSGLSGVKAL--ASGNHHFLALRNDGTVW- 775

Query: 173 FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +WG++  ++LG  T      P  + G L ++ +  IAAG  +  ++A +  G  V++ G
Sbjct: 776 -AWGDNYYSQLGDGTRTQRSTPVQVRG-LSDVKL--IAAGENH--SMAVRKDGT-VWTWG 828

Query: 231 CGLGGKLGHG 240
               G+LG+G
Sbjct: 829 LNTSGQLGNG 838


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 16/315 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 76  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 135

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 136 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 194

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  V+ IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 195 SGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 251

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G++  WG   YG LG GN+  +S P
Sbjct: 252 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 309

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H+       +  
Sbjct: 310 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVF 366

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 367 ACFATPAVTWRLLSV 381



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 160 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 219

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 220 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 277

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG++Y +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 278 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 324



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D G
Sbjct: 226 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 285

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF- 173
           Q+YA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY + 
Sbjct: 286 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 344

Query: 174 -SWGNDARLGHHT 185
              G    L HHT
Sbjct: 345 QCRGQSVILPHHT 357



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 129 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 187

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 188 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 247

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 248 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 292

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 293 NSYGQLGTGNKSNQS 307


>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
          Length = 475

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 37/312 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ +T++G VYS+G N  GQLGHG       P+PI SLQ  +++  A G   T+ +++ 
Sbjct: 112 HNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSYKVVNGATGKNHTLCLTEN 171

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG ++ G+   G   T  V SP  + + K   +V  + G  F+ +L  EG VY+F
Sbjct: 172 GDVFAFGDNAQGQLGLGNLSTN-VPSPTHI-AYKGNPIVDVSCGGEFSVILDCEGYVYSF 229

Query: 174 SWGNDARLGHHTE---------------------PNDVEPHPLLG----TLENIPVVQIA 208
                 +LG++T+                     P  VE   L G     L ++ +  I+
Sbjct: 230 GCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVE--KLKGGQVLPLNDVKITSIS 287

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G  +++AL    S   V++ G G  G+LGH  + DE  PRL+  F+      V V AG 
Sbjct: 288 CGNNHVVALD---SKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAGRGAVQVYAGY 344

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
             +  + + G   T  WG  G +   + E    PK +  L   +   +  G Y   VV+ 
Sbjct: 345 SFSIALNEMG--STMFWGLQGSI--SSRETTMYPKPLPDLQGWEIRSIGCG-YRHTVVAA 399

Query: 329 DGDVYSFGCGES 340
           D  V  +G G S
Sbjct: 400 DESVIVWGTGTS 411



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 36/287 (12%)

Query: 84  WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           ++P   +SL GI++ +   G  +   ++I++ G VY++G++  G+  +G +      SP+
Sbjct: 88  FKPHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNR--VRYDSPK 145

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
            ++SL++  VV  A G   T  L+  G V+ F      +LG      +V P P     + 
Sbjct: 146 PIDSLQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQLGLGNLSTNV-PSPTHIAYKG 204

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
            P+V ++ G  + + L C+     VYS GC   G+LG+   TD K+              
Sbjct: 205 NPIVDVSCGGEFSVILDCE---GYVYSFGCPEYGQLGN--NTDGKYFASGNKMAFDNVKN 259

Query: 248 ----PRLIEQF---QLLNLQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
               P  +E+    Q+L L  V + +   G  H   +    RV TWG+G YG LGH  ++
Sbjct: 260 AFRIPLWVEKLKGGQVLPLNDVKITSISCGNNHVVALDSKKRVFTWGFGGYGRLGHSEQK 319

Query: 298 CESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            E  P+++         A+ V  G   +  ++E G    +G   S S
Sbjct: 320 DEHTPRLLTVFERAGRGAVQVYAGYSFSIALNEMGSTMFWGLQGSIS 366



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%)

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           P   +    + +  V+    + H  ++  +G V +WG    G LGHGN      PK + +
Sbjct: 90  PHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDS 149

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
           L   K ++ ATG   T  ++E+GDV++FG      L       G GN   NV +P   T 
Sbjct: 150 LQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQL-------GLGNLSTNVPSP---TH 199

Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +      +V +S          +  L   G +Y+FG  + GQLG
Sbjct: 200 IAYKGNPIVDVSCGGEF-----SVILDCEGYVYSFGCPEYGQLG 238



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 104/236 (44%), Gaps = 19/236 (8%)

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           N  +PH    +L  I V ++  G C    L     G  VYS G    G+LGHG+R     
Sbjct: 86  NLFKPH-RYKSLVGIKVSRVITGCCSNHNLIITNEG-NVYSWGRNECGQLGHGNRVRYDS 143

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           P+ I+  Q  + + V  A G  H   + ++G V  +G    G LG GN           A
Sbjct: 144 PKPIDSLQ--SYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQLGLGNLSTNVPSPTHIA 201

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ----GNRHA--NVLT 361
                 + V+ G   + ++  +G VYSFGC E   LG+N   DG+    GN+ A  NV  
Sbjct: 202 YKGNPIVDVSCGGEFSVILDCEGYVYSFGCPEYGQLGNNT--DGKYFASGNKMAFDNVKN 259

Query: 362 ----PQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               P  V  LK  QV   +  + +T+    N H  AL    +++ +G G  G+LG
Sbjct: 260 AFRIPLWVEKLKGGQV-LPLNDVKITSISCGNNHVVALDSKKRVFTWGFGGYGRLG 314



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG   SIA+   G    +G   S      + E    P+P+  LQG  I     G   
Sbjct: 339 QVYAGYSFSIALNEMGSTMFWGLQGS----ISSRETTMYPKPLPDLQGWEIRSIGCGYRH 394

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T++ +D   +      S GE   G +  K   +P L++S  N+F+ + + G   T +++R
Sbjct: 395 TVVAADESVIVWGTGTSNGELGLG-ESRKSSANPDLMKSASNLFIQRVSCGQTHTLMIAR 453


>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1073

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 162/378 (42%), Gaps = 45/378 (11%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAG 103
           SQ  AG   S+A+ S GV+YS+G+NS GQLG   T+ +   RP R     G   +Q +AG
Sbjct: 75  SQFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAG 134

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTA 162
               + I     +Y++G +  G+A  G+  +  +   Q++ S+      VQ + G  +  
Sbjct: 135 DDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVL 194

Query: 163 VLSREGRVYTFSWGNDA--RLGH-------HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            +  +G VY  SWG+++  +LG        H  P +  P  L    + + + Q+ AG   
Sbjct: 195 AVCSDGTVY--SWGDNSSGQLGREVGGTMTHYGPGNPNPVSL---PKGVKITQVTAGGKA 249

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            LALA   S   VYS G    G+LG      E   R  +      +    ++AG  H   
Sbjct: 250 SLALASDGS---VYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILA 306

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           V  DG   +WG+G             S P  V   + ++   ++ G   + V + DG++Y
Sbjct: 307 VDSDGNTYSWGYG-----------GTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIY 355

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           S+G   S  LG +   +   N+    +TP  VT              T +I    H  A+
Sbjct: 356 SWGDNSSGQLGQDTGGE-TTNQPGKAVTPDGVT-------------YTQAIAGYRHILAM 401

Query: 394 TESGKLYAFGAGDKGQLG 411
              G LY +G     QLG
Sbjct: 402 GSDGYLYGWGDNSSSQLG 419



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 157/364 (43%), Gaps = 29/364 (7%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
            +QA AG   ++A+ S G VY++G+N+  QLG  T       P  +    GI   +  AG 
Sbjct: 655  TQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNAPDKVTPPAGIHYTRVYAGD 714

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               + +   G +YA+G +S G    G  G     +P  V + + I   Q   G     VL
Sbjct: 715  CFALALGSDGNLYAWGDNSAGALGQGRIGAT-SRNPLRVVAPEGITFTQVFTGPSSKHVL 773

Query: 165  S--REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE---NIPVVQIAAGYCYLLALAC 219
            +   +G +Y++ + +  +LG           PL G ++    I   Q + G  + LAL  
Sbjct: 774  ALGSDGNLYSWGYDDSFQLGRQRNALTALGDPLPGKVQAPAGITFTQASTGLNFSLALG- 832

Query: 220  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
              S   +YS G GL  +LG+ ++    +P  +     +N    V  AG + A   G DG 
Sbjct: 833  --SDNNLYSWGNGLKSQLGN-AQMISMYPSNVIMPSGINFTRFV--AGRYFAIAAGSDGN 887

Query: 280  VCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            + +WG+  YG LG   +++ + +P  ++A   +  I    GD  +  +  DG+ YS+G  
Sbjct: 888  LYSWGYNDYGQLGRDISDKSDYMPTKLEAPAGITLIQPQAGDNHSSAIGSDGNTYSWGKS 947

Query: 339  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY--------WNAHT 390
                LG +   D Q +    V+ P +         ++VQ   T+ IY        WN  T
Sbjct: 948  ADGVLGRDTSGD-QDSHPGKVIFPGVGI------PKLVQFGDTSGIYPTANNDGTWNVTT 1000

Query: 391  FALT 394
               T
Sbjct: 1001 PPYT 1004



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 140/343 (40%), Gaps = 47/343 (13%)

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESL 146
           P +  +GIR     +GA  ++ +   G +Y++G        Y  Q G      P +VE+ 
Sbjct: 596 PPQGTRGIRFSWIQSGADFSLALGSDGNLYSWG------INYDYQLGHTTSDKPVVVETP 649

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG------HHTEPNDVEPHPLLGT 198
             +   QAA G  F   L  +G VYT  WGN+   +LG      +H  P+ V P      
Sbjct: 650 AGVRYTQAAAGQKFALALGSDGYVYT--WGNNTYDQLGRSTFGNNHNAPDKVTPP----- 702

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLL 257
              I   ++ AG C+ LAL    S   +Y+ G    G LG G      ++P  +   + +
Sbjct: 703 -AGIHYTRVYAGDCFALALG---SDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGI 758

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC----ESVPKVVQALNDVKA 313
               V     + H   +G DG + +WG+     LG          + +P  VQA   +  
Sbjct: 759 TFTQVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNALTALGDPLPGKVQAPAGITF 818

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
              +TG   +  +  D ++YS+G G  + LG+  +        +NV+ P  +   + V  
Sbjct: 819 TQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMIS---MYPSNVIMPSGINFTRFVAG 875

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
           R   I             A    G LY++G  D GQLG ++ +
Sbjct: 876 RYFAI-------------AAGSDGNLYSWGYNDYGQLGRDISD 905



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 115/262 (43%), Gaps = 39/262 (14%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH--GTTEEEW---RPRPIRSLQGIRIIQAA 101
           Q   GP + +AV S G VYS+G NSSGQLG   G T   +    P P+   +G++I Q  
Sbjct: 185 QVSTGPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVT 244

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NF- 159
           AG   ++ ++  G VY++G +S G+         L  +P   E     + +  A G NF 
Sbjct: 245 AGGKASLALASDGSVYSWGDNSSGQ---------LGRTPSASEPANRAYKMTTADGMNFS 295

Query: 160 -----FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
                +  +L+ +    T+SWG     G  ++P+ V         + I    I+AG+ Y 
Sbjct: 296 QISAGYRHILAVDSDGNTYSWG----YGGTSQPSKVA------LPDGIRTRLISAGHDYS 345

Query: 215 LALACQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
           L  A   S   +YS G    G+LG   G  T  +  + +    +   Q +   AG  H  
Sbjct: 346 LVTA---SDGNIYSWGDNSSGQLGQDTGGETTNQPGKAVTPDGVTYTQAI---AGYRHIL 399

Query: 273 VVGQDGRVCTWGWGRYGCLGHG 294
            +G DG +  WG      LG G
Sbjct: 400 AMGSDGYLYGWGDNSSSQLGTG 421


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 166/376 (44%), Gaps = 41/376 (10%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS-KG 62
           K  IF   +EAE Q ++Q C                             G+ +  T+   
Sbjct: 6   KWPIFSLCSEAELQLIRQAC------------------------VFGSAGNEVLYTTVND 41

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 121
            ++  G+N  G LG G  +    PR +  L G +I   + G+G   +L +  G+V+ +G 
Sbjct: 42  EIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGH 101

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
           +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++
Sbjct: 102 NAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 160

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G  +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS
Sbjct: 161 GSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGS 217

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
             ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S 
Sbjct: 218 SGNQPTPCRVSALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 302 PKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNR 355
           P  V    D    + A H A   +T+   ++ G VY +G C G+S  L H        + 
Sbjct: 276 PTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDV 332

Query: 356 HANVLTPQLVTSLKQV 371
            A   TP +   L  V
Sbjct: 333 FACFATPAVTWRLLSV 348



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V++L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVSALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 17/281 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H IA+T+ G V+SFG N  GQLGHG       P+ + +L   R    A G      I
Sbjct: 74  GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALS--RKFVTAVGCSYYHTI 131

Query: 111 ---SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
              +D  ++Y+ G++ +G+   G    K   SP L+E+L    +V    G + + V S +
Sbjct: 132 FSCADEMEIYSCGRNDYGQLGLGNLDDK--NSPTLIEALNGKRIVSIGCGQYHSVVSSID 189

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G +++F   +  +LG      ++    L   ++N+   QIA GY + +A+    +   +Y
Sbjct: 190 GEIFSFGRNDSGQLGITGSDGNI---SLPKEVKNLKSTQIACGYYHTVAI----NNGQLY 242

Query: 228 SVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           S G    G+LG G  +  E  P L+   +  + + V VA G +H   +G  G++ ++G  
Sbjct: 243 SWGKNDSGQLGIGIYSAKEILPTLVRDLE--DQEIVSVACGCYHTLALGYAGQLFSFGRN 300

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            +G LG G       P ++Q L D K   +A G Y + V++
Sbjct: 301 SHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLA 341



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 160/338 (47%), Gaps = 41/338 (12%)

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-----------QLV 143
           + +IQ AAG   T++++D G VY+ G +  G +    QG   ++             +LV
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSL--SQGPNAMSQNNNNNNTRTGQLKLV 58

Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           E L  KNI  + A+ G      L+  G+V++F +    +LGH  + +   P  +   L  
Sbjct: 59  EKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQV-EALSR 117

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
             V  +   Y Y    +C    M +YS G    G+LG G+  D+  P LIE    LN + 
Sbjct: 118 KFVTAVGCSY-YHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEA---LNGKR 172

Query: 262 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATG 319
           +V +  G +H+ V   DG + ++G    G LG  G++   S+PK V+ L   K+  +A G
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL---KSTQIACG 229

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
            Y T  ++ +G +YS+G  +S  LG        G   A  + P LV  L+  ++ +V ++
Sbjct: 230 YYHTVAIN-NGQLYSWGKNDSGQLG-------IGIYSAKEILPTLVRDLE--DQEIVSVA 279

Query: 380 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
                    HT AL  +G+L++FG    GQLG    NN
Sbjct: 280 C-----GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNN 312



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 161/351 (45%), Gaps = 42/351 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSG-----------QLGHGTTEEEWRPRPIRSLQGI 95
           Q  AG  H++ +T  G VYS G N  G           Q  +       + + +  L+G 
Sbjct: 5   QVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGK 64

Query: 96  RIIQ--AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            I++  A+ G    + +++ G+V++FG +  G+  +G Q +  + SP+ VE+L   FV  
Sbjct: 65  NIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFV-- 120

Query: 154 AAIG-NFFTAVLS--REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
            A+G +++  + S   E  +Y+    +  +LG     +   P  L+  L    +V I  G
Sbjct: 121 TAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSP-TLIEALNGKRIVSIGCG 179

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
             +  ++     G  ++S G    G+LG  GS  +   P+ ++     NL+   +A G +
Sbjct: 180 QYH--SVVSSIDG-EIFSFGRNDSGQLGITGSDGNISLPKEVK-----NLKSTQIACGYY 231

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   +  +G++ +WG    G LG G     E +P +V+ L D + + VA G Y T  +  
Sbjct: 232 HTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGY 290

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
            G ++SFG      LG     DG  N   N   P L+  L  ++++V QI+
Sbjct: 291 AGQLFSFGRNSHGQLG-----DGTTN---NSCKPLLIQGL--IDKKVCQIA 331



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 4/123 (3%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAA 102
           +++Q   G  H++A+ + G +YS+G N SGQLG G  + +E  P  +R L+   I+  A 
Sbjct: 222 KSTQIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVAC 280

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T+ +  AGQ+++FG++S G+   G   T     P L++ L +  V Q A G + + 
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGT--TNNSCKPLLIQGLIDKKVCQIAAGFYHSI 338

Query: 163 VLS 165
           VL+
Sbjct: 339 VLA 341



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG------- 103
           G  H++A+   G ++SFG NS GQLG GTT    +P  I+ L   ++ Q AAG       
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVL 340

Query: 104 ---AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
                R  L+ D  Q+         +  + V+G KL
Sbjct: 341 ANPVIRNPLVEDFKQL--LNNQELSDVTFIVEGKKL 374


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 168/370 (45%), Gaps = 56/370 (15%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           GHSI ++++G  YSFG NS GQLG G T     P PI +L+G  II AA G   ++ ++D
Sbjct: 121 GHSILISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSLFVTD 180

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVLSREG 168
            G VYA G +   +   G       T+PQ++   +  +    +V+   G  F+ +L   G
Sbjct: 181 TGTVYACGDNKSAQCGLG------HTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNG 234

Query: 169 RVYTFSWGNDARLGHHTEPN------------DVEPHPL-----------LGTLENIPVV 205
            +++F      +LGH+T+              ++ P  +           +  ++++ +V
Sbjct: 235 ALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVDIV 294

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
             + G  + +A+    S    YS G G  G+LGH  + DE  PRLI+ F         V 
Sbjct: 295 DFSCGNNHTVAID---SKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVH 351

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
            GA ++  V + G +  +G  +         E    PK VQ L       V T + T+ V
Sbjct: 352 CGATYSLAVNEHGALFMFGQTKR------TGEANMYPKPVQDLTGWNIRSVGTSN-TSIV 404

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           ++ D  + ++G   S + G      G G+ + +   P+ VT ++ +N  + Q+++  S  
Sbjct: 405 IAADDSLIAWGV--SPTYGEL----GTGDINKSTARPKEVTRMEGLN--ITQVAMGYS-- 454

Query: 386 WNAHTFALTE 395
              HT  L++
Sbjct: 455 ---HTLLLSD 461



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 63/359 (17%)

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
           Q  R+I +   AG ++LIS  G+ Y+FG++S G+  +G   T+ +  P+ + +LK   ++
Sbjct: 109 QKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNII 166

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGY 211
            AA+G   +  ++  G VY       A+ G  HT P  + P  +  T    P+V++  G 
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVRYT--GAPIVKVGCGA 224

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----PRLIEQFQLL---------- 257
            + + L C     A++S G    G+LGH   TD K+     +L   F+++          
Sbjct: 225 EFSMILDCN---GALHSFGLPEYGQLGHN--TDGKYFVTSTKLSYHFEMVPKHIAFFFEK 279

Query: 258 ----------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
                     ++  V  + G  H   +    R  +WG+G +G LGH  +  ESVP++++ 
Sbjct: 280 SKDGHVSPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKY 339

Query: 308 LND----VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            +     V+++H   G   +  V+E G ++ FG  +           G+ N     + P+
Sbjct: 340 FDSQARGVRSVHC--GATYSLAVNEHGALFMFGQTKRT---------GEAN-----MYPK 383

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK-GQLGIELVNNQTER 421
            V  L   N R V  S T        +  +     L A+G     G+LG   +N  T R
Sbjct: 384 PVQDLTGWNIRSVGTSNT--------SIVIAADDSLIAWGVSPTYGELGTGDINKSTAR 434



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 45/312 (14%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            A  G  HS+ VT  G VY+ G N S Q G G TT +   P  +R   G  I++   GA 
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAE 225

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL----------------------V 143
            +M++   G +++FG   +G+  +   G   VTS +L                      V
Sbjct: 226 FSMILDCNGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHV 285

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             +K++ +V  + GN  T  +  + R Y++ +G   RLGH  + ++  P  L+   ++  
Sbjct: 286 SPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPR-LIKYFDSQA 344

Query: 204 --VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNL 259
             V  +  G  Y LA+              G     G   RT E   +P+ ++     N+
Sbjct: 345 RGVRSVHCGATYSLAVNEH-----------GALFMFGQTKRTGEANMYPKPVQDLTGWNI 393

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVA 317
           + V  +     + V+  D  +  WG    YG LG G+  +  + PK V  +  +    VA
Sbjct: 394 RSVGTSNT---SIVIAADDSLIAWGVSPTYGELGTGDINKSTARPKEVTRMEGLNITQVA 450

Query: 318 TGDYTTFVVSED 329
            G   T ++S+D
Sbjct: 451 MGYSHTLLLSDD 462



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 25/175 (14%)

Query: 243 TDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           + + HP L    +F     + +V    A H+ ++  +G   ++G    G LG G+    +
Sbjct: 93  SKKTHPNLYTFHKFTEQKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRN 152

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHAN 358
           +P+ +  L     IH A G   +  V++ G VY+ G  +SA   LGH             
Sbjct: 153 IPEPIPTLKGFNIIHAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHT------------ 200

Query: 359 VLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             TPQ++  T ++     +V++           +  L  +G L++FG  + GQLG
Sbjct: 201 --TPQILVPTRVRYTGAPIVKVGCGAEF-----SMILDCNGALHSFGLPEYGQLG 248


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 32/311 (10%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           +AG  +S+A+   G ++++G N  G LGH   ++ E  P  +++L+ ++I+QAA G    
Sbjct: 46  VAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHC 105

Query: 108 MLISDAGQVYAFGKDSFG----EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAIGNF 159
           + + D GQ YA+G + +G    E E    G+K+    +  PQ       + V Q A G  
Sbjct: 106 LAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQ--RCAPQLRVRQVAAGGT 163

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLL 215
            + VL+  G V+T+        G    P D++    P  + G LEN+ +  IA G  + L
Sbjct: 164 HSVVLTHNGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVQL--IAVGAFHNL 212

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL  +     V++ G    G+LG G       P  ++    L L    +AAG WH+  + 
Sbjct: 213 ALLEEGE---VWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLIL--ADIAAGGWHSTALT 267

Query: 276 QDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
            D  V  WG G +G LG G+++    VP+ V  L       V+ G   +   + DG ++S
Sbjct: 268 TDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFS 327

Query: 335 FGCGESASLGH 345
           +G  +   LG+
Sbjct: 328 YGRADHGRLGY 338



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 42/385 (10%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQ 115
           + S   V ++GS   GQLG G  E++     I++L   G R++   AG+  ++ I + GQ
Sbjct: 1   MESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           ++ +G +  G   +  + +K  ++P  V++L+N+ +VQAAIG +    +  +G+ Y  +W
Sbjct: 61  LFTWGWNQRGTLGHPPE-SKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAY--AW 117

Query: 176 GNDARLGHHTEPNDVEP-HPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAV 226
           G +       EP   E    +L     IP        V Q+AAG  + + L        V
Sbjct: 118 GGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLT---HNGHV 174

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++     G     G       P  ++  + + L    +A GA+H   + ++G V  WG  
Sbjct: 175 WT----WGQPWPPGDIKQISTPVRVQGLENVQL----IAVGAFHNLALLEEGEVWAWGNN 226

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            YG LG G+ +  S P  VQ L+ +    +A G + +  ++ D +VY++G GE   LG  
Sbjct: 227 EYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGF- 285

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                 G+  ++ + PQ V  L    E + Q+S   +     H+ A T  G+++++G  D
Sbjct: 286 ------GDDKSSKMVPQKVHLL--AGETIAQVSCGGT-----HSVARTADGRIFSYGRAD 332

Query: 407 KGQLGIELVNNQTERGNPERVDIDL 431
            G+LG      +   G+P  V I +
Sbjct: 333 HGRLGY---GRKVTTGHPMEVPIGI 354



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 4/142 (2%)

Query: 44  ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           EN Q IA G  H++A+  +G V+++G+N  GQLG G T+   +P P++ L G+ +   AA
Sbjct: 199 ENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAA 258

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           G   +  ++   +VYA+G+   G   +G  + +K+V  PQ V  L    + Q + G   +
Sbjct: 259 GGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMV--PQKVHLLAGETIAQVSCGGTHS 316

Query: 162 AVLSREGRVYTFSWGNDARLGH 183
              + +GR++++   +  RLG+
Sbjct: 317 VARTADGRIFSYGRADHGRLGY 338



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 20/237 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSN-SSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q  AG  HS+ +T  G V+++G     G +   +T     P  ++ L+ +++I  A GA 
Sbjct: 157 QVAAGGTHSVVLTHNGHVWTWGQPWPPGDIKQIST-----PVRVQGLENVQLI--AVGAF 209

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             + + + G+V+A+G + +G+   G   T+  + P  V+ L  + +   A G + +  L+
Sbjct: 210 HNLALLEEGEVWAWGNNEYGQ--LGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALT 267

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +  VY +  G   RLG   + +       +  L    + Q++ G  + +A   + +   
Sbjct: 268 TDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVA---RTADGR 324

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA---GAWHAAVVGQDGR 279
           ++S G    G+LG+G +    HP  +     + ++P   AA   G W   +V   GR
Sbjct: 325 IFSYGRADHGRLGYGRKVTTGHPMEVP----IGIRPPKNAAENSGCWFVKLVACGGR 377


>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 383

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 43/368 (11%)

Query: 84  WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
           +RP+ + SLQ   I   A G G T+ ++  GQVY+ G   +G  + G+   K V    L+
Sbjct: 21  YRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYG--QLGLGSLKEVEGITLI 78

Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--EN 201
           +S+    V+  A G+  +  ++ +G +Y+  +G    LG  T    +E   L+ +L  E 
Sbjct: 79  DSIPEK-VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREE 137

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS--------------RTDEKH 247
             ++++AAG+ + +AL+   SG  VYS G    G LGHG               R  E  
Sbjct: 138 EKIIKVAAGHGFSIALS--ESG-KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETS 194

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           PRLI   +   ++   ++ G+ HA  + ++G    WG GRY C    NE     P+ +  
Sbjct: 195 PRLIRALEKEQME--YISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252

Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
           L       + +G   T  +++ G V+++G      L       G G +  +   P++V  
Sbjct: 253 LPGPWK-QIVSGGAHTLGLTKGGQVWAWGVNHFGCL-------GVGEQRTSPGEPRIVEK 304

Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-------ELVNNQTE 420
           L Q  +  +Q       +    + A+   G +Y++G G  G LG        E V  Q E
Sbjct: 305 LLQQAKEPIQWIAAGWFF----SMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNE 360

Query: 421 RGNPERVD 428
           +G P +VD
Sbjct: 361 QGEPLQVD 368



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSL--QGIRIIQAAAGAGR 106
           AG  HS+ VT +G +YS G    G+LG GT       P+ + SL  +  +II+ AAG G 
Sbjct: 90  AGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGF 149

Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQA 154
           ++ +S++G+VY+FG  + G   +G V G             + TSP+L+ +L+   +   
Sbjct: 150 SIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYI 209

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           + G+     +++EG  + +  G         E N  +P  L       P  QI +G  + 
Sbjct: 210 SCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHT 267

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAA 272
           L L     G  V++ G    G LG G  RT    PR++E+      +P+  +AAG + + 
Sbjct: 268 LGLT---KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSM 324

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            V  +G V +WG G  G LG G EE +  P  +Q
Sbjct: 325 AVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQ 358



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 44/321 (13%)

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
           E E  V G   V  P++V SL+N  +   A G  FT  ++++G+VY+   G   +LG  +
Sbjct: 9   EYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGS 68

Query: 186 EPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--S 241
              +VE   L   +++IP  V+  AAG  + L +  Q     +YS G G  G+LG G  S
Sbjct: 69  -LKEVEGITL---IDSIPEKVITCAAGDRHSLFVTEQGH---LYSCGYGKRGELGLGTIS 121

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG------- 294
           R  E  P+L+E       + + VAAG   +  + + G+V ++G    G LGHG       
Sbjct: 122 RRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIF 180

Query: 295 -------NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
                  +   E+ P++++AL   +  +++ G    F ++++G  + +GCG      H  
Sbjct: 181 LWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY----HCF 236

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             D +     N   PQ +  L    +++V           AHT  LT+ G+++A+G    
Sbjct: 237 ATDNE----VNWEQPQALFHLPGPWKQIVSG--------GAHTLGLTKGGQVWAWGVNHF 284

Query: 408 GQLGIELVNNQTERGNPERVD 428
           G LG+     +T  G P  V+
Sbjct: 285 GCLGVG--EQRTSPGEPRIVE 303



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 109/258 (42%), Gaps = 29/258 (11%)

Query: 38  EACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--------------E 81
           E+  R E    +  AG G SIA++  G VYSFGS + G LGHG                 
Sbjct: 131 ESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRN 190

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
            E  PR IR+L+  ++   + G+G    I+  G  + +G   +    +          PQ
Sbjct: 191 METSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY--HCFATDNEVNWEQPQ 248

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGT 198
            +  L   +  Q   G   T  L++ G+V+ +   +   LG     T P   EP  +   
Sbjct: 249 ALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPG--EPRIVEKL 305

Query: 199 LENI--PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
           L+    P+  IAAG+ + +A+  +     VYS G G  G LG G   D+  P  I+  Q 
Sbjct: 306 LQQAKEPIQWIAAGWFFSMAVDSEGY---VYSWGRGHAGALGTGEEEDKWEPVAIQNEQG 362

Query: 257 LNLQPVVVAAGAWHAAVV 274
             LQ   + AG  +A  V
Sbjct: 363 EPLQVDRIYAGFNYAIAV 380



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRT 107
           AG   S+AV S+G VYS+G   +G LG G  E++W P  I++ QG  +++ +  AG    
Sbjct: 318 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 377

Query: 108 MLISD 112
           + + D
Sbjct: 378 IAVKD 382


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 10/318 (3%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA-GQVY 117
           T    V+  G+N SG LG G  +    PR I SL G +I   + G+G  ++++ A G+VY
Sbjct: 232 TENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVY 291

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +++ +   G     L+    +  +L N  VV+ A G+  + VL+ +G VY + + N
Sbjct: 292 TWGHNAYSQLGNGTTNHGLIPC-HVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNN 350

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  +   L+N     IA G   + ++A   SG  VY  G    G+L
Sbjct: 351 SGQVGSGSTANQPIPRRVTSCLQNKIATNIACG--QMCSMAVVESG-EVYVWGYNGNGQL 407

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G GS  ++  P  I   Q + +Q   V  G  H  V+  +G++  WG   YG LG GN+ 
Sbjct: 408 GLGSSGNQPTPCRIAALQGIRVQR--VTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKS 465

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGN 354
            +S P  V    D +  I      +T+   ++ G VY +G C G+S +L H        +
Sbjct: 466 NQSYPIPVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQCRGQSVTLPHLTHFSCTDD 525

Query: 355 RHANVLTPQLVTSLKQVN 372
             A   TP +   L  V+
Sbjct: 526 VFACFATPAVTWRLLSVD 543



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 16/243 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T++G VY++G N+  QLG+GTT     P  + + L   ++++ A G+  ++
Sbjct: 277 SGP-HVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSL 335

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+VYA+G ++ G+   G    + +  P+ V S L+N      A G   +  +   
Sbjct: 336 VLTSDGEVYAWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIATNIACGQMCSMAVVES 393

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++  GY + L L  +     +
Sbjct: 394 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQ---L 448

Query: 227 YSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           Y+ G    G+LG G+++++ +  P  +E+ +++    +     A  +A   Q G V  WG
Sbjct: 449 YAWGANSYGQLGTGNKSNQSYPIPVPVEKDRIIE---IAACHSAHTSAAKTQSGHVYMWG 505

Query: 285 WGR 287
             R
Sbjct: 506 QCR 508



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P  +    L+N + V VA G+ H+ V+  DG V  WG+
Sbjct: 290 VYTWGHNAYSQLGNGTTNHGLIPCHVST-NLVNKKVVEVACGSHHSLVLTSDGEVYAWGY 348

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +  A ++A G   +  V E G+VY +G   +  LG
Sbjct: 349 NNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLG 408

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV +++        AHT  LT+ G+LYA+GA
Sbjct: 409 LGS----SGNQP----TPCRIAALQGI--RVQRVTCG-----YAHTLVLTDEGQLYAWGA 453

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 454 NSYGQLGTGNKSNQS 468



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           +   G  HS+ +TS G VY++G N+SGQ+G G+T  +  PR + S LQ       A G  
Sbjct: 326 EVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQM 385

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M + ++G+VY +G +  G+   G  G +   +P  + +L+ I V +   G   T VL+
Sbjct: 386 CSMAVVESGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVTCGYAHTLVLT 443

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            EG++Y +   +  +LG   + N   P P+   +E   +++IAA
Sbjct: 444 DEGQLYAWGANSYGQLGTGNKSNQSYPIPV--PVEKDRIIEIAA 485



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E+ +L+  Q  V  +         ++  V   G    GCLG G+ +    P+ + +L   
Sbjct: 210 EELKLIR-QACVFGSAGNEVLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGK 268

Query: 312 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 369
           K   ++ G     VV + +G+VY++        GHNA +  G G  +  ++   + T+L 
Sbjct: 269 KITCLSYGSGPHVVVATAEGEVYTW--------GHNAYSQLGNGTTNHGLIPCHVSTNL- 319

Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            VN++VV+++  +      H+  LT  G++YA+G  + GQ+G     NQ
Sbjct: 320 -VNKKVVEVACGSH-----HSLVLTSDGEVYAWGYNNSGQVGSGSTANQ 362


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 14/316 (4%)

Query: 25  GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 83
           G W +   F L  +   +      + G G+ +  +T    V+  G+NSSG LG G  +  
Sbjct: 5   GKWPI---FALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI 61

Query: 84  WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 141
             PR I  L G RI+  + G+G   ++++  G+VY++G +++  ++ G   T    SP Q
Sbjct: 62  IEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           +  +L N      A G+  + VL+ +G VY + + N  ++G  +  N   P  +   L+N
Sbjct: 120 VSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
             V+ IA G   + ++A   +G  VY+ G    G+LG GS  ++  P  I   Q + ++ 
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 320
           VV   G  H   +  +G +  WG   YG LG GN+  +S P +V+     +  I      
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294

Query: 321 YTTFVVSEDGDVYSFG 336
           +T+   S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VYS G     +LG+GS      P  +    L+N +   VA G+ H+ V+  DG V  WG+
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAHSVACGSHHSMVLTCDGEVYAWGY 153

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P KV   L +   I +A G  ++  V ++G+VY++G   +  LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV Q+     +   AHT ALT+ G +YA+GA
Sbjct: 214 LGS----SGNQP----TPCRIAALQGI--RVEQV-----VCGYAHTLALTDEGVMYAWGA 258

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P +V +D
Sbjct: 259 NSYGQLG---TGNKSNQSYPVQVIVD 281



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 18/222 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
           G  HS+ +T  G VY++G N+SGQ+G G+T  +  PR + S LQ   +I  A G   +M 
Sbjct: 135 GSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + D G+VYA+G +  G+   G  G +   +P  + +L+ I V Q   G   T  L+ EG 
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +Y +   +  +LG   + N  + +P+   ++   +V+IAA +    + A   SG  VY  
Sbjct: 253 MYAWGANSYGQLGTGNKSN--QSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQ-VYMW 309

Query: 230 GCGLGGK-----LGHGSRTDE-----KHPRLIEQFQLLNLQP 261
           G   G       L H S TD+       P ++  ++LL+++P
Sbjct: 310 GQCRGQSVITPHLTHFSCTDDVFACFSTPAIM--WRLLSVEP 349


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 162/366 (44%), Gaps = 41/366 (11%)

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
           +G   + TTE+   P+ + S   +     A G    +L++  G+++++G+   G+  +G+
Sbjct: 264 TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 323

Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 187
           +       P+ + S++ +     A G+F T  +++ G +Y  SWG+       LGH  E 
Sbjct: 324 ETD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 379

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           +   P  + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R     
Sbjct: 380 SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSV 436

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 294
           PR +E   L+ L    VA G WH A V                G+V TWG G  G LGHG
Sbjct: 437 PREVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 494

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           + + + +P+ V +L +     VA G   T   +  G VY+ G      LG N  A G   
Sbjct: 495 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN-- 551

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
                  P+      +V   +V+ S+      + H   LT   ++Y +G G  GQLG   
Sbjct: 552 ------FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGN 599

Query: 415 VNNQTE 420
           V N+ E
Sbjct: 600 VENKRE 605



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+T  G +YS+G  +++   LGHG     W P+ +   LQG+ +   A G   T
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 406

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
            +++ +GQ++ FG  +FG   +G + +  V  P+ VESL  + V + A G + TA     
Sbjct: 407 AVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEV 464

Query: 163 --------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
                   V S  G+V+T+  G   +LGH      + P  ++ +L N  + Q+A G+   
Sbjct: 465 TNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-SLTNENICQVACGHSLT 523

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           ++   + S   VY++G    G+LG+ +      P  +E   ++      +A G++H AV+
Sbjct: 524 VS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVEASVEEIACGSYHVAVL 578

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
                + TWG G  G LGHGN E +  P VV  L + +   +  G   T V+
Sbjct: 579 TSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 630



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           ++Q IA G  H++ VT +G ++S+G    G+LGHG   +  +P+ I S++G+     A G
Sbjct: 288 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACG 347

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 162
              T  I+ +G +Y++G  +      G         P+ V   L+ ++V   A G + TA
Sbjct: 348 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTA 407

Query: 163 VLSREGRVYTFSWGNDA--RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           V++  G++  F++G+     LGH      + P +VE   L+G +    V ++A G  +  
Sbjct: 408 VVASSGQL--FTFGDGTFGALGHGDRRSTSVPREVE--SLIGLI----VTKVACGVWHTA 459

Query: 216 ALA----------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           A+              S   V++ G G  G+LGHG    +  P  +    L N     VA
Sbjct: 460 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVA 517

Query: 266 AGAWHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            G  H+  V +  R  V T G   YG LG+   +     +V   + +     +A G Y  
Sbjct: 518 CG--HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHV 575

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            V++   ++Y++G G +  LGH  + + +
Sbjct: 576 AVLTSKSEIYTWGKGLNGQLGHGNVENKR 604



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G  L + +  D   P+ +E   +L+ Q   +A G  HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDALLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GHG E     PK + ++  +    +A GD+ T  +++ GD+YS+G G      HN    G
Sbjct: 320 GHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDG-----THNVDLLG 374

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            GN  ++   P+ VT   Q     + +S      W  HT  +  SG+L+ FG G  G LG
Sbjct: 375 HGN-ESSCWIPKRVTGDLQ----GLYVSDVACGPW--HTAVVASSGQLFTFGDGTFGALG 427


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 149/351 (42%), Gaps = 50/351 (14%)

Query: 69  SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 128
           SN +G++GHG  E+   PR + +L G  +   A GA  T   + AG +Y +G    G+  
Sbjct: 152 SNDNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGA---GQGR 208

Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 188
            G    +    P  V +L    VVQAA G   TA ++  GRVYT+  G    LGH  E  
Sbjct: 209 LGHDHERDRFIPLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESA 268

Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGLGGKLGHGSRTDEK 246
              P  +         +Q+      ++ +A   +G +  VY+ G    G+LG G RT   
Sbjct: 269 CSTPREVASL-----ALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRTPRM 323

Query: 247 HPRLIEQFQLLN------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
            P L+     ++      LQ  +       A  +    R+ TWG G  G LGHG EE E 
Sbjct: 324 SPALLADLSSISRIACTYLQSNLPVKRRHRARQLMM--RMWTWGDGASGQLGHGTEEEEL 381

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           VP+ V AL  V  I VA G   T  ++  G+V+++G G    LGH A             
Sbjct: 382 VPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAI-------LRYC 434

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            P L+ SLK                         +SG LYA+G   +G LG
Sbjct: 435 KPLLIESLK-------------------------DSGHLYAWGNSRRGALG 460



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 33/281 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAG 105
           QA  G  H+ A+T  G VY++G    G LGHG       PR + SL   + ++       
Sbjct: 233 QAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASLALQVIVVVIVVVVV 292

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             ++   +G VYA+G +  G+  +G +  ++  SP L+  L +I  +          V  
Sbjct: 293 AAVVAGGSGTVYAWGGNEKGQLGFGDRTPRM--SPALLADLSSISRIACTYLQSNLPVKR 350

Query: 166 REG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           R        R++T+  G   +LGH TE  ++ P  ++  LE + ++ +AAG  +  AL  
Sbjct: 351 RHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVM-ALEQVNIIAVAAGKAHTAALTS 409

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           Q     V++ G G  G+LGHG+              L   +P+++ +       +   G 
Sbjct: 410 QGE---VWTWGDGSDGQLGHGAAI------------LRYCKPLLIES-------LKDSGH 447

Query: 280 VCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 319
           +  WG  R G LG G  EE  SVP+ V+A+   K   VA G
Sbjct: 448 LYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACG 488


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 168/377 (44%), Gaps = 27/377 (7%)

Query: 16  RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI-------AGPGHSIAV 58
            ++L   CG S K V      L+ L  G+    + C  E  Q I       +     +  
Sbjct: 2   EEELPLFCGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYT 61

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
           T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF 121

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  + G L+N  VV IA G   +  +A   SG  VY  G    G+L
Sbjct: 181 SGQVGSGSTINQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDSG-EVYVWGYNGNGQL 237

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G G+  ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+ 
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGN 354
            +S P  V    D +  I      +T+   ++ G VY +G C G+S  L H        +
Sbjct: 296 NQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDD 355

Query: 355 RHANVLTPQLVTSLKQV 371
             A   TP +   L  V
Sbjct: 356 VFACFATPAVTWRLLSV 372



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 42  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLSGK 98

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 99  KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGC-LQNKVVVTIAC 212

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 213 GQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306


>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
 gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
 gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
          Length = 495

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 42/364 (11%)

Query: 46  SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           S  ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    I+ AA G
Sbjct: 124 SCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACG 183

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              T+ +++ G VY FG++  G+   G Q T  V SP  ++      +V+ A G  F+ +
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMI 241

Query: 164 LSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLE 200
           +  +G +Y+F      +LGH+++            D E  P              +  + 
Sbjct: 242 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVP 301

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           N+    +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F      
Sbjct: 302 NVVARDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG 358

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              +  G   +  + + G +  WG      + + + E    PK VQ L   K   +A G 
Sbjct: 359 ATQIYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGK 412

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
            +  V ++D  +     G S + G     D   N+  +  T Q V +L  V    V +  
Sbjct: 413 SSIIVAADDSTI---SWGPSPTFGELGYGD---NKPKSSTTAQEVKTLDGVYSEQVVMGY 466

Query: 381 TNSI 384
           ++S+
Sbjct: 467 SHSL 470



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 112 PH-RYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169

Query: 252 EQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
           E       + V+VAA  G  H   + ++G V T+G  + G LG GN+    +       N
Sbjct: 170 EGLG----EEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN 225

Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
               + VA G   + +V   G++YSFGC E   LGHN+    IA  Q       L P+ V
Sbjct: 226 GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRV 285

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 286 AIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 37/140 (26%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
           WG  RYGCL                 +DV+   V +G     + +++ +G ++S+G  + 
Sbjct: 110 WGPHRYGCL-----------------SDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDK 152

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH     G   R   +  P+L+  L +  E +V  +   +     HT ALTE+G +Y
Sbjct: 153 GQLGH-----GDTKR---LEAPKLIEGLGE--EVIVAAACGRN-----HTLALTENGTVY 197

Query: 401 AFGAGDKGQLGIELVNNQTE 420
            FG    GQLG     NQT+
Sbjct: 198 TFGENKLGQLG---QGNQTD 214



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q   G   S A++  G ++ +G  ++ +      E    P+
Sbjct: 347 RLVKLFDFPG-----RGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPK 395

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G +I   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 396 AVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLD 455

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            ++  Q  +G   + V++R+
Sbjct: 456 GVYSEQVVMGYSHSLVIARQ 475


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 162/366 (44%), Gaps = 41/366 (11%)

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
           +G   + TTE+   P+ + S   +     A G    +L++  G+++++G+   G+  +G+
Sbjct: 277 TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 336

Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 187
           +       P+ + S++ +     A G+F T  +++ G +Y  SWG+       LGH  E 
Sbjct: 337 ETD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 392

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           +   P  + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R     
Sbjct: 393 SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSV 449

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 294
           PR +E   L+ L    VA G WH A V                G+V TWG G  G LGHG
Sbjct: 450 PREVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 507

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           + + + +P+ V +L +     VA G   T   +  G VY+ G      LG N  A G   
Sbjct: 508 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN-- 564

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
                  P+      +V   +V+ S+      + H   LT   ++Y +G G  GQLG   
Sbjct: 565 ------FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGN 612

Query: 415 VNNQTE 420
           V N+ E
Sbjct: 613 VENKRE 618



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+T  G +YS+G  +++   LGHG     W P+ +   LQG+ +   A G   T
Sbjct: 360 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 419

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
            +++ +GQ++ FG  +FG   +G + +  V  P+ VESL  + V + A G + TA     
Sbjct: 420 AVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEV 477

Query: 163 --------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
                   V S  G+V+T+  G   +LGH      + P  ++ +L N  + Q+A G+   
Sbjct: 478 TNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-SLTNENICQVACGHSLT 536

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           ++   + S   VY++G    G+LG+ +      P  +E   ++      +A G++H AV+
Sbjct: 537 VS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVEASVEEIACGSYHVAVL 591

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
                + TWG G  G LGHGN E +  P VV  L + +   +  G   T V+
Sbjct: 592 TSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 643



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)

Query: 45  NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           ++Q IA G  H++ VT +G ++S+G    G+LGHG   +  +P+ I S++G+     A G
Sbjct: 301 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACG 360

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 162
              T  I+ +G +Y++G  +      G         P+ V   L+ ++V   A G + TA
Sbjct: 361 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTA 420

Query: 163 VLSREGRVYTFSWGNDA--RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           V++  G++  F++G+     LGH      + P +VE   L+G +    V ++A G  +  
Sbjct: 421 VVASSGQL--FTFGDGTFGALGHGDRRSTSVPREVE--SLIGLI----VTKVACGVWHTA 472

Query: 216 ALA----------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
           A+              S   V++ G G  G+LGHG    +  P  +    L N     VA
Sbjct: 473 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVA 530

Query: 266 AGAWHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
            G  H+  V +  R  V T G   YG LG+   +     +V   + +     +A G Y  
Sbjct: 531 CG--HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHV 588

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            V++   ++Y++G G +  LGH  + + +
Sbjct: 589 AVLTSKSEIYTWGKGLNGQLGHGNVENKR 617



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G  L + +  D   P+ +E   +L+ Q   +A G  HA +V + G + +WG G+ G L
Sbjct: 276 GTGNSL-NSTTEDALLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 332

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GHG E     PK + ++  +    +A GD+ T  +++ GD+YS+G G      HN    G
Sbjct: 333 GHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDG-----THNVDLLG 387

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            GN  ++   P+ VT   Q     + +S      W  HT  +  SG+L+ FG G  G LG
Sbjct: 388 HGN-ESSCWIPKRVTGDLQ----GLYVSDVACGPW--HTAVVASSGQLFTFGDGTFGALG 440


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 163/374 (43%), Gaps = 38/374 (10%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV   G V+++G N++GQLG GTT +  RP  +  L  +  +  AAG    + +   
Sbjct: 470 HSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAV--AAGGSHVLALRSD 527

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G ++ G+   G    +L  +P  V  L  +  V A  G++F+  L  +G V+T+
Sbjct: 528 GSVWAWGYNALGQLGDGTTVDRL--TPVRVSGLGAVVAVAA--GSYFSMALQSDGTVWTW 583

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
             G + +LG       + P  + G L NI   ++AAG  +  ALA +  G  V++ G   
Sbjct: 584 GEGFEGQLGDGGGVQRLSPVRVEG-LANI--TRVAAGSAH--ALAVRGDGT-VWAWGDNG 637

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG GS  D   P  +   Q +      V+ G  H+  +  DG V  WG+  YG LG 
Sbjct: 638 EGQLGDGSWADRFRPVQVPGLQGIT----AVSGGRSHSMALQGDGTVRAWGYNGYGQLGD 693

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G       P ++  L  ++A+H +        +  DG +  +G      LG  A      
Sbjct: 694 GTLTSRVRPALIPGLTGIQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGAA----- 746

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                   P  V  + +V+   V           AHT  +   G + A+G    GQLG  
Sbjct: 747 ---GWSAVPVQVRGIGRVDRLSVG---------RAHTLMVRADGTVMAWGENGSGQLGD- 793

Query: 414 LVNNQTERGNPERV 427
                T R  P  V
Sbjct: 794 --GTSTHRTGPVSV 805



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 184/420 (43%), Gaps = 64/420 (15%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 107
            AG  H +A+++ G V+++G N+ GQLG G++     W PR +  L+G+  +  AAG   T
Sbjct: 1016 AGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMW-PRQVPELRGVEAV--AAGEQFT 1072

Query: 108  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA--AIGNFFTAVLS 165
            + +   G   A+G + +G+   G  G +L      +E  K    V+   A G      +S
Sbjct: 1073 VAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMS 1132

Query: 166  REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
             +G V T  WG++   +LG  T      P  + G      VV +++G  + LAL    + 
Sbjct: 1133 -DGTVQT--WGDNTFGQLGDGTTTRRAVPLTVYGLAS---VVAVSSGAWHSLALLSDGT- 1185

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
              V++ G    G+LG G+ T    P      Q+  L  VV + +G +HA  V  DG V T
Sbjct: 1186 --VWAWGANGFGQLGDGTSTPRTRP-----VQVAGLGDVVAIGSGGYHALAVCSDGSVWT 1238

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            WG+  +G LG G  E  S+P  V+ L  V A  VA GD+ +  +  DG + ++G   S  
Sbjct: 1239 WGYNAFGQLGDGTAESRSLPTRVEGLEGVVA--VAGGDHYSLALHSDGTLSAWGNNASGQ 1296

Query: 343  LG---------------------------HNAIADGQG-------NRHANVLTPQLVTSL 368
            LG                           H     G G       N    +      T +
Sbjct: 1297 LGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM 1356

Query: 369  KQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            + V   V  +S  +++   A HTFA+   G ++ +G    GQLG+    N+TE   P RV
Sbjct: 1357 RLVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTE---PLRV 1413



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 175/415 (42%), Gaps = 83/415 (20%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           ++  AG  H++AV   G V+++G N  GQLG G+  + +RP  +  LQGI  +  + G  
Sbjct: 612 TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQGITAV--SGGRS 669

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---------------- 149
            +M +   G V A+G + +G+   G   +++   P L+  L  I                
Sbjct: 670 HSMALQGDGTVRAWGYNGYGQLGDGTLTSRV--RPALIPGLTGIQALHPSHLHVLALHAD 727

Query: 150 --------------------------------FVVQAAIGNFFTAVLSREGRVYTFSWGN 177
                                            V + ++G   T ++  +G V  +    
Sbjct: 728 GTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENG 787

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
             +LG  T  +   P  + G    +P V+ +A+G  + LALAC  +   V++ G    G+
Sbjct: 788 SGQLGDGTSTHRTGPVSVPG----VPCVRSVASGIQHSLALACDGT---VWAWGANARGQ 840

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           LG G+ T    P L+E  + +    V +AAG   +  +  DG V +WG    G LG G  
Sbjct: 841 LGDGTTTPRVTPGLVEGLRGV----VALAAGGDASVALRADGSVWSWGGNASGQLGDGTL 896

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
              ++P  V+ L++  A+ VA G+     V EDG ++++G   S  LG    A       
Sbjct: 897 TDRALPAHVEHLSN--AVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAP------ 948

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
              LTP  V  L    ERV  ++        A + A+ + G  +A+G    GQLG
Sbjct: 949 --SLTPVRVKGL----ERVASVAAG-----RAFSVAVRDDGTAWAWGTNPSGQLG 992



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 172/414 (41%), Gaps = 87/414 (21%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-------- 100
           ++G  HS+A+ + G V+++G NSSGQLG GTT +   P  +  L  +  + A        
Sbjct: 115 VSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDSVVAVAAGDFHSLAL 174

Query: 101 ----------------------------------------AAGAGRTMLISDAGQVYAFG 120
                                                   AAG   T+ + + G V A+G
Sbjct: 175 REDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGVVALAAGFDFTLAVLEDGTVRAWG 234

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
            +  G+   G    +L  SP  V  L  I  V+A  G +    L ++G V+T  WG++A 
Sbjct: 235 SNGSGQLGDGTSTQRL--SPVKVSELSGITEVRA--GTYHALALGKDGGVWT--WGSNAS 288

Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
            +LG  T  +   P  + G LE +  V          +LA   +G AV++ G    G+LG
Sbjct: 289 GQLGDGTWNDRAVPMQVPG-LERVKAVA----SMDSDSLALLDTG-AVFAWGANGSGQLG 342

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
            G  TD   P  +     +      V  GA HA V+ +DG +  WG G  G LGHG  E 
Sbjct: 343 DGDTTDRATPGPVPGLNAV----ASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSER 398

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
             VP  V  L  V ++  ATG + +     DG V+++G      LG  + A+    RHA 
Sbjct: 399 HVVPAPVMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAE----RHAA 452

Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 411
           V              RV  +    S+   A H+ A+   G ++A+G    GQLG
Sbjct: 453 V--------------RVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLG 492



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 165/370 (44%), Gaps = 45/370 (12%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG   S+AV   G  +++G+N SGQLG GT      P  + SL+GIR +  +AGA   + 
Sbjct: 966  AGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKGIRAM--SAGAHHVVA 1023

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +S  G V+ +G ++ G+   G   +     P+ V  L+ +  V A  G  FT  +  +G 
Sbjct: 1024 LSADGTVWTWGDNTLGQLGDGSS-SPTGMWPRQVPELRGVEAVAA--GEQFTVAVLLDGT 1080

Query: 170  VYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
                +WG+       D + G    P  V+   + G     PV  + A   + +    Q S
Sbjct: 1081 AR--AWGSNEYGQLGDGKTGPQLTPMAVK---IEGPKIRPPVRTVRAWGQHAV---VQMS 1132

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
               V + G    G+LG G+ T    P  +  + L ++  V V++GAWH+  +  DG V  
Sbjct: 1133 DGTVQTWGDNTFGQLGDGTTTRRAVPLTV--YGLASV--VAVSSGAWHSLALLSDGTVWA 1188

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            WG   +G LG G     + P  V  L DV AI   +G Y    V  DG V+++       
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGDVVAI--GSGGYHALAVCSDGSVWTW------- 1239

Query: 343  LGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
             G+NA    G G   +  L P  V  L    E VV ++  +      ++ AL   G L A
Sbjct: 1240 -GYNAFGQLGDGTAESRSL-PTRVEGL----EGVVAVAGGDH-----YSLALHSDGTLSA 1288

Query: 402  FGAGDKGQLG 411
            +G    GQLG
Sbjct: 1289 WGNNASGQLG 1298



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 174/393 (44%), Gaps = 47/393 (11%)

Query: 44   ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
             N+ A+A G  H++AV   G ++++G+N SGQLG G T     P  ++ L+  R+   AA
Sbjct: 909  SNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLE--RVASVAA 966

Query: 103  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            G   ++ + D G  +A+G +  G+   G    + V  P  V SLK I  + A  G     
Sbjct: 967  GRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSV--PNQVTSLKGIRAMSA--GAHHVV 1022

Query: 163  VLSREGRVYTFSWGND--ARLGH-HTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLAL 217
             LS +G V+T  WG++   +LG   + P  + P   P L  +E      +AAG  + +A+
Sbjct: 1023 ALSADGTVWT--WGDNTLGQLGDGSSSPTGMWPRQVPELRGVE-----AVAAGEQFTVAV 1075

Query: 218  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAVVG 275
                +  A    G    G+LG G    +  P  + + +   ++P V    AW  HA V  
Sbjct: 1076 LLDGTARA---WGSNEYGQLGDGKTGPQLTPMAV-KIEGPKIRPPVRTVRAWGQHAVVQM 1131

Query: 276  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             DG V TWG   +G LG G     +VP  V  L  V A  V++G + +  +  DG V+++
Sbjct: 1132 SDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVA--VSSGAWHSLALLSDGTVWAW 1189

Query: 336  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
            G       G   + DG          P  V  L  V      +++ +  Y   H  A+  
Sbjct: 1190 GAN-----GFGQLGDGTSTPRTR---PVQVAGLGDV------VAIGSGGY---HALAVCS 1232

Query: 396  SGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             G ++ +G    GQLG         R  P RV+
Sbjct: 1233 DGSVWTWGYNAFGQLGD---GTAESRSLPTRVE 1262



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 39/368 (10%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +  + G  H++ +   G ++++G   SGQLGHG +E    P P+  L G+  +  A G+ 
Sbjct: 362 ASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSM--ATGSF 419

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            ++     G V+A+G++++G  + G   T    +   VE L  +  V +A     +  + 
Sbjct: 420 HSLAALGDGSVWAWGRNTYG--QLGDGSTAERHAAVRVEGLGGVRSVASAA--HHSLAVG 475

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            +G V+  +WG +A  +LG  T  +   P  + G      V  +AAG  ++LAL    S 
Sbjct: 476 MDGTVW--AWGRNAAGQLGDGTTLDRARPVAVPGLTS---VTAVAAGGSHVLALRSDGS- 529

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V++ G    G+LG G+  D   P  +     +    V VAAG++ +  +  DG V TW
Sbjct: 530 --VWAWGYNALGQLGDGTTVDRLTPVRVSGLGAV----VAVAAGSYFSMALQSDGTVWTW 583

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G  G LG G       P  V+ L ++    VA G      V  DG V+++G      L
Sbjct: 584 GEGFEGQLGDGGGVQRLSPVRVEGLANIT--RVAAGSAHALAVRGDGTVWAWGDNGEGQL 641

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G  + AD    R   V  P L        + +  +S   S     H+ AL   G + A+G
Sbjct: 642 GDGSWAD----RFRPVQVPGL--------QGITAVSGGRS-----HSMALQGDGTVRAWG 684

Query: 404 AGDKGQLG 411
               GQLG
Sbjct: 685 YNGYGQLG 692



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 166/369 (44%), Gaps = 48/369 (13%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ ++  G V+++G N SGQLG   T  +    P+R      I+   +G   ++ 
Sbjct: 65  AGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQ-GLAPVRLAALENIVSVVSGDAHSLA 123

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G +S G+   G   T    +P  V  L ++  V A  G+F +  L  +G 
Sbjct: 124 LGADGSVWTWGGNSSGQLGDGT--TTDRATPMRVAGLDSVVAVAA--GDFHSLALREDGT 179

Query: 170 VYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPS 222
           V+  +WG +   +LG  HT+P          T E +P    VV +AAG+ + LA+    +
Sbjct: 180 VW--AWGTNFHGQLGRGHTQPGL--------TPEQVPGLNGVVALAAGFDFTLAVLEDGT 229

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              V + G    G+LG G+ T    P  + +   +      V AG +HA  +G+DG V T
Sbjct: 230 ---VRAWGSNGSGQLGDGTSTQRLSPVKVSELSGIT----EVRAGTYHALALGKDGGVWT 282

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LG G     +VP  V  L  VKA  VA+ D  +  + + G V+++G   S  
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLERVKA--VASMDSDSLALLDTGAVFAWGANGSGQ 340

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG     DG     A   TP  V  L  V   V             H   L + G L+A+
Sbjct: 341 LG-----DGDTTDRA---TPGPVPGLNAVASVVGGAQ---------HALVLRKDGTLWAW 383

Query: 403 GAGDKGQLG 411
           G G  GQLG
Sbjct: 384 GGGLSGQLG 392



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 18/299 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            +G  HS+A+ S G V+++G+N  GQLG GT+    RP  +  L    ++   +G    + 
Sbjct: 1172 SGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLG--DVVAIGSGGYHALA 1229

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+ +G ++FG+   G   ++ +  P  VE L+ +  V  A G+ ++  L  +G 
Sbjct: 1230 VCSDGSVWTWGYNAFGQLGDGTAESRSL--PTRVEGLEGVVAV--AGGDHYSLALHSDGT 1285

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            +   +WGN+A  G   +      +  +       VV + AG  + +AL    +   V++ 
Sbjct: 1286 LS--AWGNNAS-GQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGT---VWTW 1339

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G+       RL+ +  + NL  V  V AGA H   V   G V TWG   +
Sbjct: 1340 GDNAFGQLGDGASGTRM--RLVPR-PVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSH 1396

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G+    + P  V+ L+DV    V+ G   +  +  DG V S+G     SLG  A
Sbjct: 1397 GQLGLGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWGSSLYGSLGLGA 1453



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 43/334 (12%)

Query: 98  IQAAAGAGRTMLISDAGQVYAF---GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
           ++ AAG   ++ +S  G V+A+   G    G AE  +QG     +P  + +L+NI  V +
Sbjct: 61  MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQG----LAPVRLAALENIVSVVS 116

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
             G+  +  L  +G V+T+   +  +LG  T  +   P  + G L++  VV +AAG  + 
Sbjct: 117 --GDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAG-LDS--VVAVAAGDFHS 171

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAV 273
           LAL    +   V++ G    G+LG G       P L  EQ   LN   V +AAG      
Sbjct: 172 LALREDGT---VWAWGTNFHGQLGRG----HTQPGLTPEQVPGLN-GVVALAAGFDFTLA 223

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           V +DG V  WG    G LG G       P  V  L+ +  +   T  Y    + +DG V+
Sbjct: 224 VLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGT--YHALALGKDGGVW 281

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G   S  LG     DG  N  A    P  V  L    ERV  ++  +S      + AL
Sbjct: 282 TWGSNASGQLG-----DGTWNDRA---VPMQVPGL----ERVKAVASMDS-----DSLAL 324

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            ++G ++A+GA   GQLG     + T+R  P  V
Sbjct: 325 LDTGAVFAWGANGSGQLGD---GDTTDRATPGPV 355



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 22/256 (8%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H++AV S G V+++G N+ GQLG GT E    P  +  L+G+  +  A G   ++ +   
Sbjct: 1226 HALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGV--VAVAGGDHYSLALHSD 1283

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G + A+G ++ G+   G   T+       V       VV    G   T  L  +G V+T 
Sbjct: 1284 GTLSAWGNNASGQLGDGTGTTRY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWT- 1338

Query: 174  SWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
             WG++A  +LG       +   P P+   L ++  V   A + + +AL        V++ 
Sbjct: 1339 -WGDNAFGQLGDGASGTRMRLVPRPVP-NLSSVSAVGAGARHTFAVALKGT-----VWTW 1391

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G    G+LG G  T+   P  + +   +     VV+ GA  +  + +DG V +WG   YG
Sbjct: 1392 GRNSHGQLGLGDNTNRTEPLRVRELSDVT----VVSGGADFSLAMKRDGTVLSWGSSLYG 1447

Query: 290  CLGHGNEECESVPKVV 305
             LG G     S P  V
Sbjct: 1448 SLGLGATGHRSSPGQV 1463



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)

Query: 44   ENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
            E   A+AG  H S+A+ S G + ++G+N+SGQLG GT     R   +       ++   A
Sbjct: 1265 EGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT--RYSRVAVKGVDGVVDVRA 1322

Query: 103  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            GA  T+ +   G V+ +G ++FG+   G  GT++   P+ V +L ++  V A   + F  
Sbjct: 1323 GATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHTFAV 1382

Query: 163  VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
             L  +G V+T+   +  +LG     N  EP   L   E   V  ++ G  + LA+    +
Sbjct: 1383 AL--KGTVWTWGRNSHGQLGLGDNTNRTEP---LRVRELSDVTVVSGGADFSLAMKRDGT 1437

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHP 248
               V S G  L G LG G+      P
Sbjct: 1438 ---VLSWGSSLYGSLGLGATGHRSSP 1460


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 37  QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 96

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 97  HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 154

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 155 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 211

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 212 IYSFGLGGNGQLGTGSTSNRKSP 234



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 12/225 (5%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           R R I+SL  I+I+Q A G   ++ +S A +V+ +G++ +G+   G    K  TSPQL++
Sbjct: 23  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 81

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
           SL  I  +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L + 
Sbjct: 82  SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 138

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            +V I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+     
Sbjct: 139 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 193

Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            +A G  H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 194 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 26/234 (11%)

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
           + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   ++  P+L++  
Sbjct: 27  IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 82

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +
Sbjct: 83  -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 141

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT +    + 
Sbjct: 142 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ- 200

Query: 375 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 423
                         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 201 --------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 240



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
           ++SL +I +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L 
Sbjct: 27  IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 84

Query: 201 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
            IP +Q+AAG  + ++L L    SG A++  G    G+LG     D   P L++   L +
Sbjct: 85  GIPFMQVAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRS 137

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
            + V +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A 
Sbjct: 138 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 197

Query: 319 G-DYTTFVVSEDGDVYSFGCGESASLG 344
           G  +T+  V   G +YSFG G +  LG
Sbjct: 198 GRQHTSAFVPSSGRIYSFGLGGNGQLG 224



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 90  QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 149

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 150 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 207

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 208 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 239


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 14/301 (4%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           ++   G ++ +G    G+LG G     + P    +L  IR    A G   ++ +S  GQV
Sbjct: 104 SLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIR--STALGGVHSVALSSLGQV 161

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           + +G   FG   + V   +L+  P++VE   N  +   A     TA ++  G +YT  WG
Sbjct: 162 FTWGYGGFGALGHSVYHRELL--PRMVEGSWNAKIRHIATAGTHTAAITESGELYT--WG 217

Query: 177 ND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            D       LG +  PN+     +   ++ +PV   A        +     G  +++ G 
Sbjct: 218 RDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQ-LWNWGA 276

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
               +LG G +     P+ I   Q  +++ + +A+G +H+  +  DG+V +WG+G++G L
Sbjct: 277 NSNYELGRGDKVGGWKPQPIPSLQ--DVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQL 334

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GH + E + +P V++AL D   I++A G  ++  ++++G +Y +G  + + LG   + + 
Sbjct: 335 GHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPET 394

Query: 352 Q 352
           Q
Sbjct: 395 Q 395



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 185/411 (45%), Gaps = 58/411 (14%)

Query: 35  LAGEACCR--RENSQAIAGP----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP 88
           L G  C    R  S +++ P      + AVT+  ++ S+G  +SGQLG G  E    P P
Sbjct: 3   LLGHRCASFMRRMSTSVSAPLLWKAENDAVTTVQLL-SWGRGASGQLGGGIEEMRLYPSP 61

Query: 89  IRSLQ-----------------------GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
           + +L                        G+  +  + G   + L+ D G+++ +GK   G
Sbjct: 62  VATLHLPPSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVVD-GKLWIWGKGDGG 120

Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
              +G +    +  P L  +L +I     A+G   +  LS  G+V+T+ +G    LGH  
Sbjct: 121 RLGFGQEYPAFL--PTLNPNLDSI--RSTALGGVHSVALSSLGQVFTWGYGGFGALGHSV 176

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG-GKLGHGSRTD 244
              ++ P  + G+  N  +  IA    +  A+    SG  +Y+ G   G G+LG G    
Sbjct: 177 YHRELLPRMVEGSW-NAKIRHIATAGTHTAAIT--ESG-ELYTWGRDQGDGRLGLGPNCG 232

Query: 245 EKHPRLIEQFQLLNLQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
                 +     +   PV VAA   G +   V+ Q+G++  WG      LG G++     
Sbjct: 233 PNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWK 292

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P+ + +L DV+ I +A+G Y +  +++DG V S+G G+   LGH++I         N   
Sbjct: 293 PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI--------ENQKI 344

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           P ++ +L   +E V+ I+   S      + A+T++GKLY +G     QLG+
Sbjct: 345 PTVIEAL--ADEHVIYIACGGS-----SSAAITDNGKLYMWGNAKDSQLGV 388



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 17/265 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A++S G V+++G    G LGH     E  PR +      +I   A     T  I+++
Sbjct: 151 HSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITES 210

Query: 114 GQVYAFGKDSFGEAEYGV-------QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           G++Y +G+D  G+   G+       +G  L + P  V++L  + V   + G FFT VL++
Sbjct: 211 GELYTWGRDQ-GDGRLGLGPNCGPNEGGGL-SIPSKVKALP-VPVAAVSCGGFFTMVLTQ 267

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           EG+++ +   ++  LG   +    +P P + +L+++ ++QIA+G  + LAL        V
Sbjct: 268 EGQLWNWGANSNYELGRGDKVGGWKPQP-IPSLQDVRIIQIASGGYHSLALT---DDGKV 323

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            S G G  G+LGH S  ++K P +IE   L +   + +A G   +A +  +G++  WG  
Sbjct: 324 LSWGYGQHGQLGHSSIENQKIPTVIE--ALADEHVIYIACGGSSSAAITDNGKLYMWGNA 381

Query: 287 RYGCLG-HGNEECESVPKVVQALND 310
           +   LG  G  E + +P  V+ L +
Sbjct: 382 KDSQLGVPGLPETQPLPVEVKFLME 406



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 3/98 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  +G  HS+A+T  G V S+G    GQLGH + E +  P  I +L    +I  A G   
Sbjct: 306 QIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSS 365

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           +  I+D G++Y +G     +++ GV G    T P  VE
Sbjct: 366 SAAITDNGKLYMWGNAK--DSQLGVPGLP-ETQPLPVE 400


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 16/315 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N SG LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  V+ I+ G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMNISCGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G++  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H+       +  
Sbjct: 301 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVF 357

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 358 ACFATPAVTWRLLSV 372



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   +M + D G+VY +G +  G+   G  G +   +P  V +L+ I V + A G   
Sbjct: 211 SCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG++Y +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G VY +G N +GQLG G++  +  P  + +LQGIR+ + A G   T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF- 173
           Q+YA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY + 
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335

Query: 174 -SWGNDARLGHHT 185
              G    L HHT
Sbjct: 336 QCRGQSVILPHHT 348



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   ++++ G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+ S G V+++G N  GQLG GTT   + P  +++L G+  I  AAG G ++ 
Sbjct: 74  AGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGGHSLA 131

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + +G+   G    +  T+P  V++L  +  V A  G+     L  +G 
Sbjct: 132 LKSDGTVWAWGYNGYGQLGDGTITNR--TTPVQVKNLTGVVAVAAGGGHSL--ALKSDGT 187

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
           V+ + +    +LG  T  N   P      ++N+  VV IAAG  + LAL    S   V++
Sbjct: 188 VWAWGYNGYGQLGDGTTMNRYTPV----QVQNLTGVVAIAAGSSHSLALK---SDGTVWA 240

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG G+ T+   P  ++    +    V +AAG  H+  +  DG V TWGW   
Sbjct: 241 WGNNGYGQLGDGTTTNRTTPVRVQGLTDV----VAIAAGNEHSLALKSDGTVWTWGWNYS 296

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G       P  VQ L  V AI  A G   +  +  DG V+++G  +   LG    
Sbjct: 297 GQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGGHSLALKSDGTVWAWGNNDWGELGDGTR 354

Query: 349 ADGQGNRHANV 359
            D    RH  V
Sbjct: 355 TD----RHTPV 361



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 130/263 (49%), Gaps = 22/263 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS+A+ S G V+++G N  GQLG GT      P  +++L    ++  AAG G ++ 
Sbjct: 124 AGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLT--GVVAVAAGGGHSLA 181

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + +G+   G    +   +P  V++L  +  + A  G+  +  L  +G 
Sbjct: 182 LKSDGTVWAWGYNGYGQLGDGTTMNRY--TPVQVQNLTGVVAIAA--GSSHSLALKSDGT 237

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WGN+   +LG  T  N   P  + G  +   VV IAAG  + LAL    S   V+
Sbjct: 238 VW--AWGNNGYGQLGDGTTTNRTTPVRVQGLTD---VVAIAAGNEHSLALK---SDGTVW 289

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG G+ T+   P      Q+ NL  VV +AAG  H+  +  DG V  WG  
Sbjct: 290 TWGWNYSGQLGDGTTTNRYTP-----VQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNN 344

Query: 287 RYGCLGHGNEECESVPKVVQALN 309
            +G LG G       P  V  LN
Sbjct: 345 DWGELGDGTRTDRHTPVQVSGLN 367



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 173/393 (44%), Gaps = 55/393 (13%)

Query: 36  AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
           AG         +  AG   S+A+ S G V+++G                 P P+++L G+
Sbjct: 25  AGADISTGSQVKIAAGGARSLAIKSDGTVWAWGGT---------------PVPVQNLTGV 69

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
             ++A  G+  ++ +   G V+A+G + +G+   G    +   +P  V++L  +  + A 
Sbjct: 70  VAVEA--GSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRY--TPVQVQNLTGVVAIAAG 125

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G+     L  +G V+ + +    +LG  T  N   P      ++N+    +A       
Sbjct: 126 GGHSL--ALKSDGTVWAWGYNGYGQLGDGTITNRTTPV----QVKNL-TGVVAVAAGGGH 178

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 274
           +LA +  G  V++ G    G+LG G+  +   P      Q+ NL  VV +AAG+ H+  +
Sbjct: 179 SLALKSDGT-VWAWGYNGYGQLGDGTTMNRYTP-----VQVQNLTGVVAIAAGSSHSLAL 232

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             DG V  WG   YG LG G     + P  VQ L DV AI  A G+  +  +  DG V++
Sbjct: 233 KSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAI--AAGNEHSLALKSDGTVWT 290

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G   S  LG         NR+    TP  V +L      VV I+         H+ AL 
Sbjct: 291 WGWNYSGQLGDGTTT----NRY----TPVQVQNLT----GVVAIAAGG-----GHSLALK 333

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
             G ++A+G  D G+LG      +T+R  P +V
Sbjct: 334 SDGTVWAWGNNDWGELGD---GTRTDRHTPVQV 363


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 15  QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 74

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 75  HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 132

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 133 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 189

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 190 IYSFGLGGNGQLGTGSTSNRKSP 212



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 12/223 (5%)

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           R I+SL  I+I+Q A G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSL 61

Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
             I  +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L +  +
Sbjct: 62  LGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKI 118

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
           V I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+      +
Sbjct: 119 VYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQI 173

Query: 265 AAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           A G  H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 174 ACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 26/234 (11%)

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
           + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    ++  P+LI+  
Sbjct: 5   IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS- 60

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +
Sbjct: 61  -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 119

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT        
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT-------- 171

Query: 375 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 423
             QI+         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 172 --QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 218



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 68  QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 127

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 128 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 185

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 186 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 217


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  HS A+T+ G V ++G    G+LGHG +E++ RP+ + +L G R I  A G+G  +T+
Sbjct: 9   GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 68

Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            I+D   V+++G   +G+    G  G KL   P  +ESL  + VV+   G+ F+  L++ 
Sbjct: 69  CITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKS 125

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VYT+  G+  RLGH +  +   P   +  L+   ++ IA G  +   +AC  SG  VY
Sbjct: 126 GAVYTWGKGDFHRLGHGSVDHVRRPKK-VAALQGKKIISIATGSLH--CVACSDSG-EVY 181

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + G    G+LG G+ T  + PRL+   Q
Sbjct: 182 TWGDNDEGQLGDGTVTAIQRPRLVAALQ 209



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 19/188 (10%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTW 283
           V + G G  G+LGHG   D+  P+L+E   LL  + + +A G+  A    +  D  V +W
Sbjct: 22  VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSW 79

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G G YG LG G  +   +P  +++L  +  + V  G   +  +++ G VY++G G+   L
Sbjct: 80  GDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRL 139

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           GH ++         +V  P+ V +L+   ++++ I+ T S+    H  A ++SG++Y +G
Sbjct: 140 GHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWG 184

Query: 404 AGDKGQLG 411
             D+GQLG
Sbjct: 185 DNDEGQLG 192



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 19/246 (7%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L     + IA G
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACG 61

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
                 L C      V+S G G  GKLG G     K P  IE   L  L  V V  G+  
Sbjct: 62  SGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQF 118

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG       S+ G
Sbjct: 119 SVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 178

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
           +VY++G  +   LG   +   Q         P+LV +L+   + +V+++       +AHT
Sbjct: 179 EVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHT 223

Query: 391 FALTES 396
            AL+ S
Sbjct: 224 LALSTS 229



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   S+A+T  G VY++G     +LGHG+ +   RP+ + +LQG +II  A G+   +  
Sbjct: 115 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 174

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           SD+G+VY +G +   E + G      +  P+LV +L+   +V+   G+  T  LS
Sbjct: 175 SDSGEVYTWGDND--EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 227



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ +T    V+S+G    G+LG G ++    P  I SL G+ +++   G+  ++ 
Sbjct: 62  SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 121

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++ +G VY +GK  F    +G      V  P+ V +L+   ++  A G+      S  G 
Sbjct: 122 LTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 179

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           VYT+   ++ +LG  T      P  L+  L+   +V++  G  + LAL+
Sbjct: 180 VYTWGDNDEGQLGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALS 227


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 43/344 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   + G     LI+  G+++++G+   G   + +     +  P+LV+S
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMD--LDHPKLVDS 348

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVE---PHPLLGTLE 200
           L  I     A G + T  L++ G VYT  WG D+R G     E N      P  L G L+
Sbjct: 349 LNGIAAKSVACGEYQTCALTKAGEVYT--WG-DSRFGADFDCEENSRSRWLPQKLSGPLK 405

Query: 201 NIPVVQIAAGYCYLLAL-ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
            I +  +A G  +   + AC      +++ G G  G LGHG+      P+ +E    L +
Sbjct: 406 GISISNVACGEWHTAVVSACG----RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCV 461

Query: 260 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           + V  A G+WH A +              G++ TWG G  G LGHG+ E + +P  V  L
Sbjct: 462 KSV--ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 519

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     V+ G   T  ++  G VY+ G      LG+        +R A+V   +     
Sbjct: 520 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGN------LSSRDASVAIVE----- 568

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            ++ E  V+ ++++  Y   H  +LT +G++Y +G G  GQLG+
Sbjct: 569 GKLKEEFVK-AISSGSY---HVASLTSTGRVYTWGKGAHGQLGL 608



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 32/295 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQL--GHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G   + A+T  G VY++G +  G        +   W P+ +   L+GI I   A G   T
Sbjct: 360 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 419

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            ++S  G+++ +G  +FG   +G      ++ P+ VESL  + V   A G++ TA +   
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHG--NLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDI 477

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                   S  G+++T+  G+  +LGH      + P   +  L +    Q++ G    + 
Sbjct: 478 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLP-TCVAPLVDCDFAQVSCGRMLTVG 536

Query: 217 LACQPSGMA-VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHA 271
           L    + M  VY++G  + G+LG+ S  D        +L E+F         +++G++H 
Sbjct: 537 L----TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFV------KAISSGSYHV 586

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           A +   GRV TWG G +G LG G+ +  ++P  V+AL D +   +A G   T  +
Sbjct: 587 ASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAI 641



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G   ++ +T+ G VY+ GS+  GQLG+ ++ +         L+   +   ++G+ 
Sbjct: 525 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSY 584

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               ++  G+VY +GK + G+   G    + +  P  VE+L +  V   A G+ FTA +
Sbjct: 585 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNL--PTFVEALGDKQVESIACGSNFTAAI 641


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+++ +G +
Sbjct: 137 IFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHN 196

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 197 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 255

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 256 SGSTANQPIPRRVTGCLQNKVVVNIACG--QMCSVAVVDNG-EVYVWGYNGNGQLGLGSS 312

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 313 GNQSTPCRIAALQGICVQR--VACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYP 370

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 371 TPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 416



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 45/319 (14%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 100 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGDIQSTIEP 159

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H I  T++G ++++G N+  QLG+GTT     P  I + 
Sbjct: 160 RRLDSLSGKKIACFSYGSGP-HVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN 218

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +   ++   L+N  V
Sbjct: 219 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQNKVV 277

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
           V  A G   +  +   G VY + +  + +LG  +  N   P   +  L+ I V ++A GY
Sbjct: 278 VNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTP-CRIAALQGICVQRVACGY 336

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAW 269
            + L L  +     VY  G    G+LG G+++++ +P    +E+ +++     + A  + 
Sbjct: 337 AHTLVLTDEGQ---VYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIE----IAACHST 389

Query: 270 H-AAVVGQDGRVCTWGWGR 287
           H +A   Q G V  WG  R
Sbjct: 390 HTSAAKTQGGHVYMWGQCR 408



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 26/316 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           LQ IR       AG  +L S    +++  G +  G    G+   +    P+ ++SL    
Sbjct: 112 LQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGC--LGLGDIQSTIEPRRLDSLSGKK 169

Query: 151 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           +   + G+    +L + EG +  F+WG++A  +LG+ T  + + P  +   L N  V+++
Sbjct: 170 IACFSYGSGPHVILATTEGEI--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 227

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A G
Sbjct: 228 ACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGC-LQNKVVVNIACG 283

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              +  V  +G V  WG+   G LG G+   +S P  + AL  +    VA G   T V++
Sbjct: 284 QMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLT 343

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           ++G VY +G      L       G GN+ +N   P  V   K   +R+++I+  +S + +
Sbjct: 344 DEGQVYVWGANSYGQL-------GTGNK-SNQSYPTPVAVEK---DRIIEIAACHSTHTS 392

Query: 388 AHTFALTESGKLYAFG 403
           A   A T+ G +Y +G
Sbjct: 393 A---AKTQGGHVYMWG 405



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 190 IFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 248

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   +++A G   +  V ++G+VY +G   +  LG
Sbjct: 249 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLG 308

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  + V           AHT  LT+ G++Y +GA
Sbjct: 309 LGS----SGNQS----TPCRIAALQGICVQRVACGY-------AHTLVLTDEGQVYVWGA 353

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 354 NSYGQLGTGNKSNQS 368


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 150/326 (46%), Gaps = 28/326 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            G  H+  V   G V+ FG N  GQLG G T+   +P  ++SL+  + I  A G   T++
Sbjct: 43  CGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLI 102

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV----ESLKNIFVVQAAIGNFFTAVLS 165
            ++  +++AFG +S G+   G    + V  PQ++    E   NI  + A  G   +A L+
Sbjct: 103 STECNKIFAFGCNSDGQLGVGDLDDRWV--PQMISTDLEKTNNIIALSA--GCHHSAFLT 158

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            EG VY +   +D + G   E   + P  +    +N P+  I+ GY Y  A     S   
Sbjct: 159 EEGSVYIWGDNSDGQCGIKNENYLLNPRKI--EFQN-PINSISCGY-YHTAFI---SLGK 211

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G    GKLG   +     P  +E    L+   + V  G  H  ++ + G+   +G 
Sbjct: 212 VYTFGEDDNGKLGRSDKLPNDVPEGVE----LDENCISVKCGGSHTIILTESGKAYAFGS 267

Query: 286 GRYGCLGHGNEECE-SVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
              G LG GN E E S+P+ V   ++ V  I+V  G+  +  ++++G +Y+ G G +  L
Sbjct: 268 NFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKL 327

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLK 369
            +        +   N+ TP  +   K
Sbjct: 328 CNE-------DESTNICTPTTIEMFK 346



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I D G V+ FGK  F E          ++S   V   +N  V + + G+  TA++ + GR
Sbjct: 9   IPDTGAVFTFGKSRFAED---------LSSHFFV---RNDPVKEISCGDEHTALVCKSGR 56

Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY-LLALACQPSGMAVY 227
           V+ F   +  +LG  HT+   V     L +L+    + +A G  + L++  C      ++
Sbjct: 57  VFLFGKNDFGQLGFGHTKI--VNKPSCLKSLKPFQSIHVACGKSHTLISTECNK----IF 110

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + GC   G+LG G   D   P++I          + ++AG  H+A + ++G V  WG   
Sbjct: 111 AFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNS 170

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G  G  NE     P+ ++  N + +I  + G Y T  +S  G VY+FG  ++  LG + 
Sbjct: 171 DGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFISL-GKVYTFGEDDNGKLGRSD 227

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                         P  V    +++E  + +    S     HT  LTESGK YAFG+   
Sbjct: 228 ------------KLPNDVPEGVELDENCISVKCGGS-----HTIILTESGKAYAFGSNFS 270

Query: 408 GQLGIELVNNQTERGNPERVDI 429
           GQLG  L N +TE   P+RV+ 
Sbjct: 271 GQLG--LGNFETEFSIPQRVNF 290



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 28/316 (8%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           + + + G   T L+  +G+V+ FGK+ FG+  +G   TK+V  P  ++SLK    +  A 
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG--HTKIVNKPSCLKSLKPFQSIHVAC 95

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 215
           G   T + +   +++ F   +D +LG     +   P  +   LE    ++ ++AG C+  
Sbjct: 96  GKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAG-CHHS 154

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVV 274
           A   +    +VY  G    G+ G  +     +PR IE FQ     P+  ++ G +H A +
Sbjct: 155 AFLTEEG--SVYIWGDNSDGQCGIKNENYLLNPRKIE-FQ----NPINSISCGYYHTAFI 207

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              G+V T+G    G LG  ++    VP+ V+   D   I V  G   T +++E G  Y+
Sbjct: 208 SL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVEL--DENCISVKCGGSHTIILTESGKAYA 264

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           FG   S  L       G GN       PQ V      +E V  I +T      +H+  LT
Sbjct: 265 FGSNFSGQL-------GLGNFETEFSIPQRVNF---TDENVNLIYVT---CGESHSAFLT 311

Query: 395 ESGKLYAFGAGDKGQL 410
           + GKLY  G G  G+L
Sbjct: 312 DEGKLYTCGDGRNGKL 327



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 96/229 (41%), Gaps = 14/229 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS  +T +G VY +G NS GQ G         PR I     I  I  + G   T  
Sbjct: 149 AGCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAF 206

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           IS  G+VY FG+D  G  + G         P+ VE  +N   V+   G   T +L+  G+
Sbjct: 207 IS-LGKVYTFGEDDNG--KLGRSDKLPNDVPEGVELDENCISVKC--GGSHTIILTESGK 261

Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            Y F      +LG  + E     P  +  T EN+ ++ +  G  +   L  +     +Y+
Sbjct: 262 AYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEG---KLYT 318

Query: 229 VGCGLGGKL-GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            G G  GKL      T+   P  IE F+  +     V+ G  H  V+ +
Sbjct: 319 CGDGRNGKLCNEDESTNICTPTTIEMFK--SFFCTYVSCGGCHTMVLAK 365



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 2/172 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            +I+   +  A  S G VY+FG + +G+LG         P  +   +    I    G   
Sbjct: 195 NSISCGYYHTAFISLGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDENC--ISVKCGGSH 252

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T++++++G+ YAFG +  G+   G   T+     ++  + +N+ ++    G   +A L+ 
Sbjct: 253 TIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTD 312

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           EG++YT   G + +L +  E  ++     +   ++     ++ G C+ + LA
Sbjct: 313 EGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLA 364


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL GI  +Q AAG  
Sbjct: 31  QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 90

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L+
Sbjct: 91  HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 148

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V +IA G  +  A    PS   
Sbjct: 149 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 205

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +YS G G  G+LG GS ++ K P
Sbjct: 206 IYSFGLGGNGQLGTGSTSNRKSP 228



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 12/225 (5%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           R R I+SL  I+I+Q A G   ++ +S A +V+ +G++ +G+   G    K  TSPQL++
Sbjct: 17  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 75

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
           SL  I  +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L + 
Sbjct: 76  SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 132

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            +V I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+     
Sbjct: 133 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 187

Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
            +A G  H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 188 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 26/234 (11%)

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
           + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   ++  P+L++  
Sbjct: 21  IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 76

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +
Sbjct: 77  -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 135

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT +    + 
Sbjct: 136 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ- 194

Query: 375 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 423
                         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 195 --------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 234



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
           ++SL +I +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L 
Sbjct: 21  IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 78

Query: 201 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
            IP +Q+AAG  + ++L L    SG A++  G    G+LG     D   P L++   L +
Sbjct: 79  GIPFMQVAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRS 131

Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
            + V +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A 
Sbjct: 132 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 191

Query: 319 G-DYTTFVVSEDGDVYSFGCGESASLG 344
           G  +T+  V   G +YSFG G +  LG
Sbjct: 192 GRQHTSAFVPSSGRIYSFGLGGNGQLG 218



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 84  QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 143

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V + A G   T A + 
Sbjct: 144 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 201

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 202 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 233


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 174/399 (43%), Gaps = 41/399 (10%)

Query: 33  FLLAGEACCR---RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
            +L G   C    R  +   AG  HS+ V   G   ++G N  GQLG GT+ + + P P+
Sbjct: 428 MILEGGTPCAPSPRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPV 487

Query: 90  RSLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
           + +QG+    A +A A  T+ ++  G V+ +G +  G+    V   ++  +P  +  L  
Sbjct: 488 Q-VQGLTGATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAP--LPGLTG 544

Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           +  +  A G + +  L ++G V+ +   N  +LG  T  +  E  P+ G  +   V  +A
Sbjct: 545 VTAL--ASGTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTD---VTALA 599

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
           A   + LAL    +   V++ G    G+LG G+      P  +     ++     +AAG 
Sbjct: 600 ASTYHSLALKQDGT---VWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVS----AIAAGL 652

Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
            H+  + QDG V  WG    G LG+G      VP  VQ L  V AI  A G Y +  + +
Sbjct: 653 VHSLALKQDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGLTGVSAI--AAGSYHSLALKQ 710

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           DG  +S+G   +  LG+  I           LTP  V  L  V               +A
Sbjct: 711 DGTAWSWGRNGTGQLGNETI--------TGSLTPVQVQGLTAVTALAGG---------DA 753

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           H+ AL   G ++ +G   +G+LG        +R  P RV
Sbjct: 754 HSMALLRDGTVWTWGYNAEGELGD---GTTLDRTAPVRV 789



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 16/255 (6%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A+   G V+++G N+ GQLG GTT       P+  L  +  +  AA    ++ +   
Sbjct: 554 HSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTDVTAL--AASTYHSLALKQD 611

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+ +G +S G+   G   ++L  +P  V  L  +  + A  G   +  L ++G V+ +
Sbjct: 612 GTVWTWGYNSSGQLGDGTTASRL--TPAQVPGLTGVSAIAA--GLVHSLALKQDGTVWAW 667

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
               D +LG+    N   P  + G      V  IAAG  + LAL  +  G A +S G   
Sbjct: 668 GRNTDGQLGNGAAVNSPVPVQVQGLTG---VSAIAAGSYHSLAL--KQDGTA-WSWGRNG 721

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG+ + T    P  ++    +      +A G  H+  + +DG V TWG+   G LG 
Sbjct: 722 TGQLGNETITGSLTPVQVQGLTAVT----ALAGGDAHSMALLRDGTVWTWGYNAEGELGD 777

Query: 294 GNEECESVPKVVQAL 308
           G     + P  VQ L
Sbjct: 778 GTTLDRTAPVRVQGL 792



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+A+   G V+++G NSSGQLG GTT     P  +  L G+  I  AAG   ++ +   
Sbjct: 604 HSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVSAI--AAGLVHSLALKQD 661

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G+++ G+   G      V SP  V+      V   A G++ +  L ++G  +++
Sbjct: 662 GTVWAWGRNTDGQLGNGAA----VNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSW 717

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                 +LG+ T    + P  + G      V  +A G  + +AL    +   V++ G   
Sbjct: 718 GRNGTGQLGNETITGSLTPVQVQGLTA---VTALAGGDAHSMALLRDGT---VWTWGYNA 771

Query: 234 GGKLGHGSRTDEKHPRLIEQFQL 256
            G+LG G+  D   P  ++   L
Sbjct: 772 EGELGDGTTLDRTAPVRVQGLVL 794


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 166/338 (49%), Gaps = 40/338 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+T  G V+ +G NS G++  G      RP  I  L+   I+Q + G   ++ +  +
Sbjct: 95  HTLAITKHGTVWGWGYNSKGEITEGGKNIA-RPVQINGLK--DIVQVSTGLVHSLALDQS 151

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+++G++ +G+   G      +  P  VE L NI  ++A  G   +  LS +G+V+ +
Sbjct: 152 GAVWSWGENIYGQLGNGTNQDSSI--PTKVEFLSNIVAIEA--GAEHSLALSNDGKVWAW 207

Query: 174 SWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
                 +LG+  TE +++ P  L+  LENI +  IA G  + LAL       A+++ G  
Sbjct: 208 GRNEFGQLGNGETEKSNI-PR-LVKNLENIEM--IAGGDNHSLALDHDG---AIWAWGYN 260

Query: 233 LGGKLGHGS-RTDEKHPRLIEQ------FQLLNLQPVV--VAAGAWHAAVVGQDGRVCTW 283
             G++G GS    EK  +L E+       +L  L   V  V+AG  H+  + ++G V  W
Sbjct: 261 SNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAW 320

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           GW  YG LG+G+ +   VP      N+V    I + TG Y +F V E G +Y++G     
Sbjct: 321 GWNEYGQLGNGSMKDSKVP----LRNNVGRSIIDIETGSYHSFAVDESGVIYAWGDATYG 376

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
            LG        GNR         +T + ++N  V++I+
Sbjct: 377 QLGDGTFGK-DGNR---------ITYMVRMNPIVIKIN 404



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 171/375 (45%), Gaps = 49/375 (13%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S  + S G V++ G N+ GQLG+GT ++      +  L    ++   +    T+ 
Sbjct: 41  AGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDEL--YDVVSLDSDMDHTLA 98

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+  G V+ +G +S GE     +G K +  P  +  LK+I  VQ + G   +  L + G 
Sbjct: 99  ITKHGTVWGWGYNSKGEI---TEGGKNIARPVQINGLKDI--VQVSTGLVHSLALDQSGA 153

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  SWG +   +LG+ T  +   P  +   L NI  V I AG  + LAL+       V+
Sbjct: 154 VW--SWGENIYGQLGNGTNQDSSIPTKVE-FLSNI--VAIEAGAEHSLALSNDGK---VW 205

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+G       PRL++  + + +    +A G  H+  +  DG +  WG+  
Sbjct: 206 AWGRNEFGQLGNGETEKSNIPRLVKNLENIEM----IAGGDNHSLALDHDGAIWAWGYNS 261

Query: 288 YGCLGHGNEEC-ESVPKVVQALNDVKAI----------HVATGDYTTFVVSEDGDVYSFG 336
            G +G G+    E   ++ +  N  + +           V+ G   +  ++E+G+VY++G
Sbjct: 262 NGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWG 321

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             E   LG+ ++ D +            V     V   ++ I   +      H+FA+ ES
Sbjct: 322 WNEYGQLGNGSMKDSK------------VPLRNNVGRSIIDIETGS-----YHSFAVDES 364

Query: 397 GKLYAFGAGDKGQLG 411
           G +YA+G    GQLG
Sbjct: 365 GVIYAWGDATYGQLG 379



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS+A+   G V+S+G N  GQLG+GT ++   P  +  L  I  I+  AGA  
Sbjct: 137 QVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNIVAIE--AGAEH 194

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +S+ G+V+A+G++ FG+   G   T+    P+LV++L+NI ++  A G+  +  L  
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGE--TEKSNIPRLVKNLENIEMI--AGGDNHSLALDH 250

Query: 167 EGRVYTFSWGNDARLGHHT------------EPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           +G ++ + + ++ ++G  +            + N  EP  L G    +   Q++AG  + 
Sbjct: 251 DGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVK--QVSAGIKHS 308

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            AL        VY+ G    G+LG+GS  D K P        +    + +  G++H+  V
Sbjct: 309 TALTENGE---VYAWGWNEYGQLGNGSMKDSKVPLR----NNVGRSIIDIETGSYHSFAV 361

Query: 275 GQDGRVCTWGWGRYGCLGHG 294
            + G +  WG   YG LG G
Sbjct: 362 DESGVIYAWGDATYGQLGDG 381



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 20/150 (13%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
           V + AG + + ++  DG V T G    G LG+G E+  S    V  L DV ++  +  D+
Sbjct: 37  VSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDVVSLD-SDMDH 95

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            T  +++ G V+ +G      +              N+  P  +  LK     +VQ+S  
Sbjct: 96  -TLAITKHGTVWGWGYNSKGEITEGG---------KNIARPVQINGLKD----IVQVSTG 141

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  H+ AL +SG ++++G    GQLG
Sbjct: 142 -----LVHSLALDQSGAVWSWGENIYGQLG 166


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 56/349 (16%)

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           + + P+ ++S   +     + G    +L++  GQ+Y++G++S G   +GV     V  P+
Sbjct: 283 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPK 340

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLG 197
           L++      V  A  G F T  ++  G +Y  +WG    N   LG  +  +  +P  +LG
Sbjct: 341 LIDEFNGSTVELADCGEFHTCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILG 398

Query: 198 TLENIPVVQIAAGYCYLLALACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
            +E I          Y+ A++C P       S   +++ G G  G LGHG R     PR 
Sbjct: 399 QMEGI----------YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPRE 448

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           +E   L   + +  A G WH+A V          G++ TWG G  G LGHG+ EC  +P 
Sbjct: 449 VE--ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 506

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V  L+      VA G   T  +S  G VY+ G  + +              H  V  P 
Sbjct: 507 CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPS--------------HDIVRAPS 552

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 411
            +       E  +  S    +    H  A L    ++Y +G G  GQLG
Sbjct: 553 CI-------EGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLG 594



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGA 104
           A  G  H+ AVT+ G +Y++G   +++G LG G+    W+P R +  ++GI +   + G 
Sbjct: 353 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 412

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++  G+++ FG  +FG   +G + +  +  P+ VE+L     ++AA G + +A +
Sbjct: 413 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRTIKAACGVWHSAAV 470

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
                  +  G+++T+  G+D RLGH     D+E   +   +  L+     Q+A G    
Sbjct: 471 VSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDTTSFQQVACGQSIT 526

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL+   SG  VY++G          S    + P  IE   L       VA G  H AV+
Sbjct: 527 VALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFVQEVACGFHHIAVL 576

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
                V TWG G  G LGHG+ E   +P +V+AL   +   V  G +YT  +
Sbjct: 577 NSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 628



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)

Query: 134 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 188
           + L+T   L + LK+   + A   + G  +  +++++G++Y  SWG ++  RLGH     
Sbjct: 278 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 333

Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
              PHP L    N   V++A    +          +  +  G    G LG GS      P
Sbjct: 334 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 393

Query: 249 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
            R++ Q + + ++   ++ G WH A V  +G++ T+G G +G LGHG+    ++P+ V+A
Sbjct: 394 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 451

Query: 308 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           LN  + I  A G + +  V       +  G ++++G G+   LGH  I           L
Sbjct: 452 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI--------ECRL 503

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
            P  VT L   +    Q++   SI     T AL+ SG++YA G  D
Sbjct: 504 IPSCVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTAD 542



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 27/246 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS+G +++FG  + G LGHG       PR + +L G R I+AA G   +  +
Sbjct: 411 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAV 470

Query: 111 -------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                  + +G+++ +G    G   +G    +L+  P  V  L      Q A G   T  
Sbjct: 471 VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVA 528

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           LS  G+VY         +G     +D+   P  + G L    V ++A G+ ++  L    
Sbjct: 529 LSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN--- 577

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQ 276
           S   VY+ G G  G+LGHG       P L++  +   ++ VV      A    H  + G 
Sbjct: 578 SKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGT 637

Query: 277 DGRVCT 282
           D   C+
Sbjct: 638 DSTKCS 643



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 47  QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q +A   H IAV  SK  VY++G  S+GQLGHG TE    P  +++L+G ++ +   G+ 
Sbjct: 564 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 623

Query: 106 RTMLI 110
            T  I
Sbjct: 624 YTATI 628


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 15/292 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           +Y++G  ++G LGHG   +E  P  + +L G  I + A GA  T+ +S  G+V+++G   
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGY 268

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL---SREGRVYTFSWGNDAR 180
            G    G    +   +P  +  L+++ + Q A   F +A +   S++G +++F   +  +
Sbjct: 269 GGRLGQGHLRDRF--TPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQ 326

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LG   +         + +L    + ++A G  +  ALA   S   ++  GC   G+LG+G
Sbjct: 327 LGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGS---LWLWGCNESGQLGNG 383

Query: 241 SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEEC 298
           + T    P L+E    L    V+ VA G  H+A + + GR+   G   YG LG H N+  
Sbjct: 384 NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQ 443

Query: 299 E-----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           +     +V   V+   D + +HVA GD  T VV++ G+++++G G+   LGH
Sbjct: 444 DDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGH 495



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 22/306 (7%)

Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
           DA  +Y +G+ + G   +G    +    P +VE+L    + + A G   T  LS++G V+
Sbjct: 205 DACDIYTWGEGTNGMLGHGEDTQE--AHPHVVEALLGKDIRKVACGATHTLALSKDGEVF 262

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-ACQPSGMAVYSVG 230
           ++  G   RLG     +   P  + G LE++ + Q+A    +  A+ AC   G A++S G
Sbjct: 263 SWGSGYGGRLGQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQG-ALFSFG 320

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
               G+LG     D+     I+    L+   +  VA G++H+A + + G +  WG    G
Sbjct: 321 ENDYGQLG--IPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESG 378

Query: 290 CLGHGNEECESVPKVVQALNDVK---AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            LG+GN    S+P +++A ND++    + VA GD  +  +++ G +  F CG++      
Sbjct: 379 QLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRM--FCCGDNTY---- 432

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERV-VQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               GQ   H N      VT    V  RV       +    ++HT  +T+ G+++ +G G
Sbjct: 433 ----GQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRG 488

Query: 406 DKGQLG 411
             G+LG
Sbjct: 489 KGGRLG 494



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 15/279 (5%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           EA   ++  +   G  H++A++  G V+S+GS   G+LG G   + + P  I  L+ + +
Sbjct: 235 EALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNL 294

Query: 98  IQAAAGAGRTMLI---SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 153
            Q A     +  +   S  G +++FG++ +G  + G+   KL+TS  Q V SL    + +
Sbjct: 295 TQVACNEFHSAAVCACSKQGALFSFGENDYG--QLGIPEDKLLTSYIQCVSSLSEHKISR 352

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG--TLENIPVVQIAAGY 211
            A G+F +A L+  G ++ +      +LG+    +   P  L     L +  V+++A G 
Sbjct: 353 VACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGD 412

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQL---LNLQPVVVAAG 267
            +  A   +   M  +  G    G+LG H +   + H       ++    + + V VA G
Sbjct: 413 QH-SAFITKKGRM--FCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACG 469

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
             H AVV   G + TWG G+ G LGHG+     +P  ++
Sbjct: 470 DSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIE 508



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 22/255 (8%)

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           +YT+  G +  LGH  +  +  PH ++  L    + ++A G  + LAL+       V+S 
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPH-VVEALLGKDIRKVACGATHTLALS---KDGEVFSW 264

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---GQDGRVCTWGWG 286
           G G GG+LG G   D   P  I   + LNL  V  A   +H+A V    + G + ++G  
Sbjct: 265 GSGYGGRLGQGHLRDRFTPIRICGLESLNLTQV--ACNEFHSAAVCACSKQGALFSFGEN 322

Query: 287 RYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            YG LG   ++   S  + V +L++ K   VA G + +  ++E G ++ +GC ES  LG+
Sbjct: 323 DYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGN 382

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                  GN  +  L   L       ++ V++++  +      H+  +T+ G+++  G  
Sbjct: 383 -------GNYTSTSLPSLLEAGNDLRHDAVMEVACGDQ-----HSAFITKKGRMFCCGDN 430

Query: 406 DKGQLGIELVNNQTE 420
             GQLG  L +NQ +
Sbjct: 431 TYGQLGAHLNDNQDD 445



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 7/190 (3%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           KL+  ++    +    + S+   G  HS A+   G ++ +G N SGQLG+G       P 
Sbjct: 333 KLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPS 392

Query: 88  PIRSLQGIR---IIQAAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQL 142
            + +   +R   +++ A G   +  I+  G+++  G +++G+  A         VT    
Sbjct: 393 LLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVA 452

Query: 143 VESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
           V      +   V  A G+  TAV++  G ++T+  G   RLGH    N   P  +   +E
Sbjct: 453 VRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGME 512

Query: 201 NIPVVQIAAG 210
              V  ++ G
Sbjct: 513 GKHVRGVSCG 522


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 16/288 (5%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 113
           ++ VT    V++ G+N SG LG G  +    PR I  L G +I+  + G G  ++I+ A 
Sbjct: 43  ALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATAD 102

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 172
           G+VYA+G + + +   G     L  +P LV + L +  V + A G+  T  L+ +G VY 
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGL--TPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYA 160

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           + + N  ++G  +  N   P  +   L+N  VV IA G   L ++A   +G  +Y  G  
Sbjct: 161 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDNG-EIYGWGYN 217

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G+  +++ P  I   Q +N+  V VA G  H   +  +G V  WG   YG LG
Sbjct: 218 CNGQLGLGNNGNQQTPCRIAALQGVNI--VQVACGYAHTLALTDEGFVYAWGANSYGQLG 275

Query: 293 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            GN+  +++P  +    + + +V A H +   +T+   ++ G V  +G
Sbjct: 276 TGNKSNQALPTPINTDKERIVEVAACHTS---HTSAAKTQSGQVLMWG 320



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 25/289 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
           GP H +  T+ G VY++G N   QLG+GTT     P  + + L   R+ + A G+  T+ 
Sbjct: 93  GP-HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIA 151

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+VYA+G ++ G+   G    +   +P+ V S L+N  VV  A G   +  +   G
Sbjct: 152 LTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNG 209

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +Y + +  + +LG     N   P   +  L+ + +VQ+A GY + LAL     G  VY+
Sbjct: 210 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNIVQVACGYAHTLALT--DEGF-VYA 265

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTWG 284
            G    G+LG G+++++  P  I        +  +V   A H    +A   Q G+V  WG
Sbjct: 266 WGANSYGQLGTGNKSNQALPTPIN-----TDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
             R      G            + +DV A   AT   T  ++S DGD Y
Sbjct: 321 QCR------GQAVASPHLTHFSSTDDVFAC-FATPAVTWHLLSVDGDDY 362



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 5/165 (3%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 104
           ++   G  H+IA+T+ G VY++G N+SGQ+G G+T  +  PR + S LQ   ++  A G 
Sbjct: 140 TEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 199

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             +M + D G++Y +G +  G+   G  G +   +P  + +L+ + +VQ A G   T  L
Sbjct: 200 LCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGVNIVQVACGYAHTLAL 257

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           + EG VY +   +  +LG   + N   P P+    E I  V++AA
Sbjct: 258 TDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKERI--VEVAA 300



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 24/208 (11%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P L+    LL+ +   VA G+ H   +  DG V  WG+
Sbjct: 105 VYAWGHNGYSQLGNGTTNHGLTPALVST-NLLSKRVTEVACGSHHTIALTTDGEVYAWGY 163

Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 342
              G +G G+   +  P+ V + L +   +++A G   +  V ++G++Y +G  C     
Sbjct: 164 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLG 223

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+N      GN+     TP  + +L+ VN  +VQ++        AHT ALT+ G +YA+
Sbjct: 224 LGNN------GNQQ----TPCRIAALQGVN--IVQVACGY-----AHTLALTDEGFVYAW 266

Query: 403 GAGDKGQLGIELVNNQTERGNPERVDID 430
           GA   GQLG     N++ +  P  ++ D
Sbjct: 267 GANSYGQLG---TGNKSNQALPTPINTD 291


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 167/379 (44%), Gaps = 26/379 (6%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
           +  + KP+ +A    LK    G W +         + C  E  Q I       +     +
Sbjct: 14  REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
             T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGE 124

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+ +G +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            N  ++G  +  N   P  + G L+N  VV IA G   +  +A   SG  VY  G    G
Sbjct: 184 NNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDSG-EVYVWGYNGNG 240

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG G+  ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQ 352
           +  +S P  V    D +  I      +T+   ++ G VY +G C G+S  L H       
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCT 358

Query: 353 GNRHANVLTPQLVTSLKQV 371
            +  A   TP +   L  V
Sbjct: 359 DDVFACFATPAVTWRLLSV 377



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 47  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLSGK 103

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 161

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 162 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGC-LQNKVVVTIAC 217

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 218 GQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 278 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 326

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 327 SA---AKTQGGHVYMWG 340



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 243

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 244 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 288

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 16/284 (5%)

Query: 69  SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEA 127
           +N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +++ + 
Sbjct: 1   TNCCGCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
             G     LV    +  +L N  V + A G++ + VL+ +G V+ + + N  ++G  +  
Sbjct: 61  GNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           N + P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS  ++  
Sbjct: 120 NQLIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPT 176

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
           P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P  V  
Sbjct: 177 PCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 234

Query: 308 LND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             D    + A H A   +T+   ++ G VY +G C G+S +L H
Sbjct: 235 EKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPH 275



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 16/243 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
           +GP H +  T++G V+++G N+  QLG+GTT     P  I + L   ++ + A G+  ++
Sbjct: 36  SGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSL 94

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
           +++  G+V+A+G ++ G+   G    +L+  P+ V   L+N  VV  A G   +  +   
Sbjct: 95  VLTSDGEVFAWGYNNSGQVGSGSTANQLI--PRRVTGCLQNKVVVNIACGQMCSMAVVNT 152

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           G VY + +  + +LG  +  N  +P P  +  L+ I V ++A GY + L L  +     V
Sbjct: 153 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---V 207

Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
           Y+ G    G+LG G+++++ +P   ++E+ +++    +     A  +A   Q G V  WG
Sbjct: 208 YAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIE---IAACHSAHTSAAKTQGGHVYMWG 264

Query: 285 WGR 287
             R
Sbjct: 265 QCR 267



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 42  RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
            ++ ++   G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  
Sbjct: 80  NKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNI 139

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   
Sbjct: 140 ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAH 197

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 198 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIIEIAA 244



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 49  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 107

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 108 NNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 167

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 168 LGS--------SGNQPTPCRIAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 212

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 213 NSYGQLGTGNKSNQS 227


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%)

Query: 14  AERQDLKQKCGGSWKLVLRFLLAGEACCRRENS---QAIAGPGHSIAVTSKGVVYSFGSN 70
           A   +L  +C G+  LV++  L+      +E+S   Q  AG  H++ +++ G +Y+ GSN
Sbjct: 7   ATHHELCIECPGNLDLVIKPTLSK----WKESSHIQQISAGEFHTLYLSNNGHLYTCGSN 62

Query: 71  SSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
             GQLG  T   +   P  + + +G  +   A G   +M + + GQ +++G DS G+   
Sbjct: 63  EVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGS 122

Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
            + G+     P+++++L    V+Q A G++ T VL+  G +Y +   +  + G     N 
Sbjct: 123 NL-GSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNK 181

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
                 L ++  IP+  IA G  +  AL+   SG AV+  G    G+LG   R    +P 
Sbjct: 182 ETTPQALSSILGIPIALIACGSNHTFALS--QSG-AVFGWGKNSHGQLGLQDRESRCYPT 238

Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
            ++   L N++   ++ G    A +  DG V T G G YG  GHGN + E VP+ V  L 
Sbjct: 239 HLK--TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELM 296

Query: 310 DVKAIHVATG 319
                 VA G
Sbjct: 297 GSTVTQVACG 306



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 15/264 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
           S    G  HS+A+   G  +S+GS+S GQLG    +  + +P+ I++L    +IQ A G+
Sbjct: 91  STIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGS 150

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T+++++ G +YA+G +S+G+   G +  K  T+PQ + S+  I +   A G+  T  L
Sbjct: 151 YHTVVLTNNGDLYAWGANSYGQCGLGNRSNK-ETTPQALSSILGIPIALIACGSNHTFAL 209

Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           S+ G V  F WG ++  +LG     +   P   L TL N+ V  I+ G  +   L     
Sbjct: 210 SQSGAV--FGWGKNSHGQLGLQDRESRCYPTH-LKTLRNVKVCHISCGEDFTAFLTLDG- 265

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVC 281
              V++ G G  G+ GHG+  DE  PR +   +L+      VA G  H    VG+  R+ 
Sbjct: 266 --GVFTCGAGEYGQTGHGNTKDELVPRKV--MELMGSTVTQVACGRRHMLCRVGE--RIL 319

Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
             G+G  G LG  +     VP  V
Sbjct: 320 ACGYGARGQLGCPHMAFALVPTPV 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 31/320 (9%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAA 155
           I Q +AG   T+ +S+ G +Y  G +  G+   G Q      TSP LV++ K   +   A
Sbjct: 37  IQQISAGEFHTLYLSNNGHLYTCGSNEVGQL--GRQTNSADGTSPVLVDTFKGCTLSTIA 94

Query: 156 IGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            G   +  L   G+   FSWG+D+  +LG +   +  +   ++ TL    V+Q+A G  +
Sbjct: 95  CGLQHSMALDEWGQ--PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
            + L    +   +Y+ G    G+ G G+R++ E  P+ +    +L +   ++A G+ H  
Sbjct: 153 TVVLT---NNGDLYAWGANSYGQCGLGNRSNKETTPQALSS--ILGIPIALIACGSNHTF 207

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
            + Q G V  WG   +G LG  + E    P  ++ L +VK  H++ G+  T  ++ DG V
Sbjct: 208 ALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGV 267

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           ++ G GE    GH    D         L P+ V  L  +   V Q++             
Sbjct: 268 FTCGAGEYGQTGHGNTKDE--------LVPRKVMEL--MGSTVTQVAC-------GRRHM 310

Query: 393 LTESG-KLYAFGAGDKGQLG 411
           L   G ++ A G G +GQLG
Sbjct: 311 LCRVGERILACGYGARGQLG 330



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV 262
           + QI+AG  + L L+   +   +Y+ G    G+LG  + + D   P L++ F+   L   
Sbjct: 37  IQQISAGEFHTLYLS---NNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLS-- 91

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDY 321
            +A G  H+  + + G+  +WG    G LG       +  PK+++ L     I VA G Y
Sbjct: 92  TIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSY 151

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
            T V++ +GD+Y++G       G        GNR     TPQ ++S+  +   ++     
Sbjct: 152 HTVVLTNNGDLYAWGANSYGQCG-------LGNRSNKETTPQALSSILGIPIALIACG-- 202

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
                + HTFAL++SG ++ +G    GQLG++
Sbjct: 203 -----SNHTFALSQSGAVFGWGKNSHGQLGLQ 229



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 28/281 (9%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           LV  P L +  ++  + Q + G F T  LS  G +YT       +LG  T   D     L
Sbjct: 22  LVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVL 81

Query: 196 LGTLENIPVVQIAAGYCYLLALA--CQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLI 251
           + T +   +  IA G  + +AL    QP     +S G    G+LG   GS   +K P++I
Sbjct: 82  VDTFKGCTLSTIACGLQHSMALDEWGQP-----FSWGSDSMGQLGSNLGSHAQDK-PKII 135

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALND 310
           +     N+  + VA G++H  V+  +G +  WG   YG  G GN    E+ P+ + ++  
Sbjct: 136 KTLATKNV--IQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILG 193

Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
           +    +A G   TF +S+ G V+ +G      LG   + D +   +     P  + +L+ 
Sbjct: 194 IPIALIACGSNHTFALSQSGAVFGWGKNSHGQLG---LQDRESRCY-----PTHLKTLRN 245

Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V  +V  IS          T  LT  G ++  GAG+ GQ G
Sbjct: 246 V--KVCHISCGEDF-----TAFLTLDGGVFTCGAGEYGQTG 279


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 16/289 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     L+    +  +L N  V + A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNHGLMPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRISALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D    + A H+A   +T+   ++ G VY +G C G+S  L H
Sbjct: 277 APVVVEKDRIIEIAACHLA---HTSAAKTQGGHVYMWGQCRGQSVILPH 322



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 47/320 (14%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 66  RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++ + A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKV 182

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G   +  +   G VY + +  + +LG  +  N  +P P  +  L+ I V ++A 
Sbjct: 183 VVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN--QPTPCRISALQGIRVQRVAC 240

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P   ++E+ +++ +    +A  
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHT 297

Query: 268 AWHAAVVGQDGRVCTWGWGR 287
              +A   Q G V  WG  R
Sbjct: 298 ---SAAKTQGGHVYMWGQCR 314



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLMPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  +++L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRISALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 56/349 (16%)

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           + + P+ ++S   +     + G    +L++  GQ+Y++G++S G   +GV     V  P+
Sbjct: 286 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPK 343

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLG 197
           L++      V  A  G F T  ++  G +Y  +WG    N   LG  +  +  +P  +LG
Sbjct: 344 LIDEFNGSTVELADCGEFHTCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILG 401

Query: 198 TLENIPVVQIAAGYCYLLALACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
            +E I          Y+ A++C P       S   +++ G G  G LGHG R     PR 
Sbjct: 402 QMEGI----------YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPRE 451

Query: 251 IEQFQLLNLQPVVVAAGAWHAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPK 303
           +E   L   + +  A G WH+A V          G++ TWG G  G LGHG+ EC  +P 
Sbjct: 452 VE--ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 509

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            V  L+      VA G   T  +S  G VY+ G  + +              H  V  P 
Sbjct: 510 CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPS--------------HDIVRAPS 555

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 411
            +       E  +  S    +    H  A L    ++Y +G G  GQLG
Sbjct: 556 CI-------EGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLG 597



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGA 104
           A  G  H+ AVT+ G +Y++G   +++G LG G+    W+P R +  ++GI +   + G 
Sbjct: 356 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 415

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++  G+++ FG  +FG   +G + +  +  P+ VE+L     ++AA G + +A +
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRTIKAACGVWHSAAV 473

Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
                  +  G+++T+  G+D RLGH     D+E   +   +  L+     Q+A G    
Sbjct: 474 VSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDTTSFQQVACGQSIT 529

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           +AL+   SG  VY++G          S    + P  IE   L       VA G  H AV+
Sbjct: 530 VALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFVQEVACGFHHIAVL 579

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
                V TWG G  G LGHG+ E   +P +V+AL   +   V  G +YT  +
Sbjct: 580 NSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)

Query: 134 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 188
           + L+T   L + LK+   + A   + G  +  +++++G++Y  SWG ++  RLGH     
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 336

Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
              PHP L    N   V++A    +          +  +  G    G LG GS      P
Sbjct: 337 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 396

Query: 249 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
            R++ Q + + ++   ++ G WH A V  +G++ T+G G +G LGHG+    ++P+ V+A
Sbjct: 397 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 454

Query: 308 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
           LN  + I  A G + +  V       +  G ++++G G+   LGH  I           L
Sbjct: 455 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI--------ECRL 506

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
            P  VT L   +    Q++   SI     T AL+ SG++YA G  D
Sbjct: 507 IPSCVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTAD 545



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 27/246 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           GP H+  VTS+G +++FG  + G LGHG       PR + +L G R I+AA G   +  +
Sbjct: 414 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAV 473

Query: 111 -------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                  + +G+++ +G    G   +G    +L+  P  V  L      Q A G   T  
Sbjct: 474 VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVA 531

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           LS  G+VY         +G     +D+   P  + G L    V ++A G+ ++  L    
Sbjct: 532 LSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN--- 580

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQ 276
           S   VY+ G G  G+LGHG       P L++  +   ++ VV      A    H  + G 
Sbjct: 581 SKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGT 640

Query: 277 DGRVCT 282
           D   C+
Sbjct: 641 DSTKCS 646



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 47  QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q +A   H IAV  SK  VY++G  S+GQLGHG TE    P  +++L+G ++ +   G+ 
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 626

Query: 106 RTMLI 110
            T  I
Sbjct: 627 YTATI 631


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 43/344 (12%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   + G     LI+  G+++++G+   G   + +     +  P+LV+S
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMD--LDHPKLVDS 368

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVE---PHPLLGTLE 200
           L  I     A G + T  L++ G VYT  WG D+R G     E N      P  L G L+
Sbjct: 369 LNGIAAKSVACGEYQTCALTKAGEVYT--WG-DSRFGADFDCEENSRSRWLPQKLSGPLK 425

Query: 201 NIPVVQIAAGYCYLLAL-ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
            I +  +A G  +   + AC      +++ G G  G LGHG+      P+ +E    L +
Sbjct: 426 GISISNVACGEWHTAVVSACG----RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCV 481

Query: 260 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           + V  A G+WH A +              G++ TWG G  G LGHG+ E + +P  V  L
Sbjct: 482 KSV--ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 539

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
            D     V+ G   T  ++  G VY+ G      LG+ +      +R A+V   +     
Sbjct: 540 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLS------SRDASVAIVE----- 588

Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            ++ E  V+ ++++  Y   H  +LT +G++Y +G G  GQLG+
Sbjct: 589 GKLKEEFVK-AISSGSY---HVASLTSTGRVYTWGKGAHGQLGL 628



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 32/295 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQL--GHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G   + A+T  G VY++G +  G        +   W P+ +   L+GI I   A G   T
Sbjct: 380 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 439

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            ++S  G+++ +G  +FG   +G      ++ P+ VESL  + V   A G++ TA +   
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHG--NLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDI 497

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                   S  G+++T+  G+  +LGH      + P   +  L +    Q++ G    + 
Sbjct: 498 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLP-TCVAPLVDCDFAQVSCGRMLTVG 556

Query: 217 LACQPSGMA-VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHA 271
           L    + M  VY++G  + G+LG+ S  D        +L E+F         +++G++H 
Sbjct: 557 L----TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFV------KAISSGSYHV 606

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           A +   GRV TWG G +G LG G+ +  ++P  V+AL D +   +A G   T  +
Sbjct: 607 ASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAI 661



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G   ++ +T+ G VY+ GS+  GQLG+ ++ +         L+   +   ++G+ 
Sbjct: 545 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSY 604

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
               ++  G+VY +GK + G+   G    + +  P  VE+L +  V   A G+ FTA +
Sbjct: 605 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNL--PTFVEALGDKQVESIACGSNFTAAI 661


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 26/379 (6%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
           +  + KP+ +A    LK    G W +         + C  E  Q I       +     +
Sbjct: 14  REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQAWVFGSAGNEVL 64

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
             T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE 124

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+ +G +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            N  ++G  +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNG 240

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG G+  ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQ 352
           +  +S P  V    D +  I      +T+   ++ G VY +G C G+S  L H       
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCT 358

Query: 353 GNRHANVLTPQLVTSLKQV 371
            +  A   TP +   L  V
Sbjct: 359 DDVFACFATPAVTWRLLSV 377



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 47  LQLIRQAWVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 103

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 161

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 162 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 217

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 218 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 278 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 326

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 327 SA---AKTQGGHVYMWG 340



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 244 -------LGNS-GNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 288

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 16/289 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     L+    +  +L N  V + A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLMPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRISALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D    + A H+A   +T+   ++ G VY +G C G+S  L H
Sbjct: 301 APVVVEKDRIIEIAACHLA---HTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 7/173 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
           ++ ++   G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  A
Sbjct: 152 KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIA 211

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T
Sbjct: 212 CGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRISALQGIRVQRVACGYAHT 269

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
            VL+ EG+VY +   +  +LG   + N   P P++  +E   +++IAA  C+L
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIIEIAA--CHL 318



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 3/122 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV + G VY +G N +GQLG G++  +  P  I +LQGIR+ + A G   T++++D G
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVYA+G +S+G+   G +  +   +P +VE  + I +    + +  +A  ++ G VY   
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAH-TSAAKTQGGHVYM-- 333

Query: 175 WG 176
           WG
Sbjct: 334 WG 335



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLMPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  +++L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRISALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 146/288 (50%), Gaps = 16/288 (5%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 113
           ++ VT    V++ G+N SG LG G  +    PR I  L G +I+  + G G  + I+ A 
Sbjct: 34  ALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATAD 93

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 172
           G+V+++G + + +   G     L  +P LV + L    V++ A G+  T  L+ +G V+ 
Sbjct: 94  GEVFSWGHNGYSQLGNGTSTHGL--TPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFA 151

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           + + N  ++G  +  N   P  +   L+N  VV IA G   L ++A   SG  +Y  G  
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDSG-EIYGWGYN 208

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G+  +++ P  I   Q +N+  + VA G  H   +  +G V +WG   YG LG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQGVNV--IQVACGYAHTIALTDEGFVYSWGANSYGQLG 266

Query: 293 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            GN+  ++VP ++    + +++V A H +   +T+   ++ G V  +G
Sbjct: 267 TGNKCNQAVPTLINTEKERMSEVAACHTS---HTSAAKTQSGQVLMWG 311



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 10/239 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
           GP  +IA T+ G V+S+G N   QLG+GT+     P  + + L G R+I+ A G+  T+ 
Sbjct: 84  GPHVAIA-TADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
           ++  G+V+A+G ++ G+   G    +   +P+ V S L+N  VV  A G   +  +   G
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDSG 200

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +Y + +  + +LG     N   P   +  L+ + V+Q+A GY + +AL     G  VYS
Sbjct: 201 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNVIQVACGYAHTIALT--DEGF-VYS 256

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG G++ ++  P LI   +   +  V     +  +A   Q G+V  WG  R
Sbjct: 257 WGANSYGQLGTGNKCNQAVPTLINT-EKERMSEVAACHTSHTSAAKTQSGQVLMWGQCR 314



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 7/149 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
           +   G  H+IA+T+ G V+++G N+SGQ+G G+T  +  PR + S LQ   ++  A G  
Sbjct: 132 EVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQL 191

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M + D+G++Y +G +  G+   G  G +   +P  + +L+ + V+Q A G   T  L+
Sbjct: 192 CSMAVLDSGEIYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGVNVIQVACGYAHTIALT 249

Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEP 192
            EG VY  SWG ++  +LG   + N   P
Sbjct: 250 DEGFVY--SWGANSYGQLGTGNKCNQAVP 276



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 151/321 (47%), Gaps = 27/321 (8%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P  ++ ++   +  +AA     + ++D  +V+A G +  G    G+   +    P+ ++ 
Sbjct: 15  PEELKLIRQACVFGSAANEALYVTVND--EVFALGTNCSGC--LGLGDLQSTIEPRRIDV 70

Query: 146 LKNIFVVQAAIGN-FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
           L    +V  + G     A+ + +G V  FSWG++  ++LG+ T  + + P  +   L   
Sbjct: 71  LCGKKIVSLSYGTGPHVAIATADGEV--FSWGHNGYSQLGNGTSTHGLTPALVSTNLLGK 128

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V+++A G  + +AL    +   V++ G    G++G GS  ++  PR +    L N   V
Sbjct: 129 RVIEVACGSHHTIALT---TDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKVVV 184

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +A G   +  V   G +  WG+   G LG GN   +  P  + AL  V  I VA G   
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAH 244

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           T  ++++G VYS+G      L       G GN+  N   P L+ + K   ER+ +++  +
Sbjct: 245 TIALTDEGFVYSWGANSYGQL-------GTGNK-CNQAVPTLINTEK---ERMSEVAACH 293

Query: 383 SIYWNAHTFALTESGKLYAFG 403
           + + +A   A T+SG++  +G
Sbjct: 294 TSHTSA---AKTQSGQVLMWG 311



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 30/208 (14%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G     +LG+G+ T    P L+    LL  + + VA G+ H   +  DG V  WG+
Sbjct: 96  VFSWGHNGYSQLGNGTSTHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 342
              G +G G+   +  P+ V + L +   +++A G   +  V + G++Y +G  C     
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLG 214

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+N      GN+     TP  + +L+ VN  V+Q++        AHT ALT+ G +Y++
Sbjct: 215 LGNN------GNQQ----TPCRIAALQGVN--VIQVACGY-----AHTIALTDEGFVYSW 257

Query: 403 GAGDKGQLGI---------ELVNNQTER 421
           GA   GQLG           L+N + ER
Sbjct: 258 GANSYGQLGTGNKCNQAVPTLINTEKER 285



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G +Y +G N +GQLG G    +  P  I +LQG+ +IQ A G   T+ ++D G
Sbjct: 193 SMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEG 252

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTF 173
            VY++G +S+G+   G +  + V  P L+ + K  +  V A   +  +A  ++ G+V   
Sbjct: 253 FVYSWGANSYGQLGTGNKCNQAV--PTLINTEKERMSEVAACHTSHTSAAKTQSGQV--L 308

Query: 174 SWGN-------DARLGHHTEPNDV 190
            WG           L H +  +DV
Sbjct: 309 MWGQCRGQAVASPHLTHFSSTDDV 332


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  104 bits (260), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 14/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  VT  G ++ FGSN+ GQLG GT     +P  +++L+  R+   A G   T++ 
Sbjct: 44  GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVF 103

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
           +  G +YA G ++  E + G+      TS  LVE   K   +   A G+  +A L+++GR
Sbjct: 104 TSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +Y +   ++ ++G   E N + P  + +G      V  ++ GY +   +       A+Y+
Sbjct: 162 LYMWGDNSEGQIGLGKESNALTPQEVSVGK----RVFWVSCGYYHSAFVTVDG---ALYT 214

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    GKLG  +     H ++ +Q   +  + V VA G  H   + ++  V ++G G++
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQF 272

Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G LGHG    ES +P+VV+     +  H A G+  T +++++G +Y+FG G    LG
Sbjct: 273 GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 18/251 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 108
           G  H++  TS+G +Y+ G N+ GQLG G   +      +   + QG  I   AAG+  + 
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG-PIKMLAAGSNTSA 154

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G++Y +G +S G+   G +   L  +PQ V   K +F V  + G + +A ++ +G
Sbjct: 155 ALTQDGRLYMWGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYHSAFVTVDG 210

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAV 226
            +YTF   +  +LG  TE   +  H +   + +IP  VVQ+A G  + +AL    +   V
Sbjct: 211 ALYTFGEKDSGKLGLSTE--KLANHKVPQQVTDIPDRVVQVACGGGHTVAL----TENEV 264

Query: 227 YSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           YS G G  G+LGHG+   E   PR++E F+   ++    A G  H A++  +G + T+G 
Sbjct: 265 YSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHA--ACGENHTALITDNGLLYTFGD 322

Query: 286 GRYGCLGHGNE 296
           GR+G LG G E
Sbjct: 323 GRHGKLGLGEE 333



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 27/317 (8%)

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           ++ + G   T L+++ G+++ FG +++G+   G + T  V  P  V++LK+  V   A G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT--VNKPTCVKALKSERVKLTACG 96

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              T V +  G +Y     N+ +LG     +    H +    +  P+  +AAG     AL
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                   +Y  G    G++G G  ++   P+ +     +  +   V+ G +H+A V  D
Sbjct: 157 T---QDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVD 209

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSF 335
           G + T+G    G LG   E+  +  KV Q + D+  + + VA G   T  ++E+ +VYSF
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSF 267

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G G+   LGH                    + L +V E   +  + ++     HT  +T+
Sbjct: 268 GLGQFGQLGHGTFI--------------FESRLPRVVEHFRKGRVKHAACGENHTALITD 313

Query: 396 SGKLYAFGAGDKGQLGI 412
           +G LY FG G  G+LG+
Sbjct: 314 NGLLYTFGDGRHGKLGL 330



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 15/231 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S A+T  G +Y +G NS GQ+G G       P+ +    G R+   + G   +  
Sbjct: 148 AGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAF 205

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           ++  G +Y FG+   G  + G+   KL     PQ V  + +  VVQ A G   T  L+ E
Sbjct: 206 VTVDGALYTFGEKDSG--KLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALT-E 261

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
             VY+F  G   +LGH T    +    L   +E+    ++    C     A       +Y
Sbjct: 262 NEVYSFGLGQFGQLGHGTF---IFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 228 SVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           + G G  GKLG G    T++  P L  +F  L+     V  G  H  V+ +
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRF--LDYHVHSVTCGGCHMLVLAK 367



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G GH++A+T +  VYSFG    GQLGHGT   E R PR +   +  R+  AA G  
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T LI+D G +Y FG    G+   G +       P L     +  V     G     VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366

Query: 166 R 166
           +
Sbjct: 367 K 367



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           +F L N  P+ ++ G  H A+V ++G++  +G   +G LG G +   + P  V+AL   +
Sbjct: 30  KFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSER 89

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
               A G   T V +  G++Y+ G      LG      G  N   +     LV    +  
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL-----GDCNDRTSF---HLVEFFNKQG 141

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              +  + +N+      + ALT+ G+LY +G   +GQ+G+
Sbjct: 142 PIKMLAAGSNT------SAALTQDGRLYMWGDNSEGQIGL 175



 Score = 45.8 bits (107), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 25/146 (17%)

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           + + G V T+G  ++          ++ P      NDV  + ++ GD  T +V+E+G ++
Sbjct: 9   IPESGAVFTFGKSKFA---------DNAPSKFWLKNDV-PLRISCGDEHTALVTENGKLF 58

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            FG      LG              V  P  V +LK  +ERV   +   +     HT   
Sbjct: 59  MFGSNNWGQLGLGT--------KTTVNKPTCVKALK--SERVKLTACGRT-----HTLVF 103

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQT 419
           T  G LYA G  ++GQLG+   N++T
Sbjct: 104 TSRGNLYACGGNNEGQLGLGDCNDRT 129


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 157/345 (45%), Gaps = 32/345 (9%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+IA+  +GV YS+GSN  GQLG G T   +RP  I  +   +I+    GA  T+ I
Sbjct: 505 GEFHTIALCEEGV-YSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAI 563

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +   +VY++G    G+   G++  +   +P+ ++ L +  V+QAA G   +AVL+ +  V
Sbjct: 564 TSDYKVYSWGWGVHGQL--GLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYV 621

Query: 171 YTFSWGNDARLG---HHTE--PNDVEPHPL-------LGTLENIPVVQIAAGYC----YL 214
           YTF      +LG   H+ +  P  V+   L        G  E I + +    +C    Y 
Sbjct: 622 YTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYH 681

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
               C  +  + Y      G K+   ++ D  H    E  Q     P+  +  G WH  +
Sbjct: 682 QFYICAKAESSKY------GRKMASNTK-DLNHRFYPETLQFQLQHPITQIFCGNWHYII 734

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           +    +V TWG+   G LGH N+  +S P++V+AL     I VA G   +     D ++ 
Sbjct: 735 LTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIM 794

Query: 334 SFGCGESASLG---HNAIADGQGNRHA--NVLTPQLVTSLKQVNE 373
           ++G  +   +G      + +    R +   VL P LV  L  +++
Sbjct: 795 AWGRNDEGKIGIENEGNLGNSSSARQSIYCVLAPTLVHGLPSIDD 839



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 28/267 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
            + G  H++A+TS   VYS+G    GQLG  + E +  P+ I  L   ++IQAAAG   +
Sbjct: 553 VVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHS 612

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +++    VY FG D +G+   G    +++  PQLV+SL    +   + G F T  +S +
Sbjct: 613 AVLTSQRYVYTFGADLYGQLGIGSHYKQVI--PQLVDSLTLDSIYLISCGPFETIAISED 670

Query: 168 GRVYTFSWGND------------ARLGHHTEPNDVE------PHPLLGTLENIPVVQIAA 209
             +  F WG +            ++ G     N  +      P  L   L++ P+ QI  
Sbjct: 671 QTI--FCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQH-PITQIFC 727

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  + + L    S   VY+ G    G+LGH ++ D+  PRL++   L+    + VA GA 
Sbjct: 728 GNWHYIILT---SVNQVYTWGYNDCGQLGHYNKIDQSAPRLVK--ALIRRAIIGVAVGAE 782

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE 296
            +     D  +  WG    G +G  NE
Sbjct: 783 FSVAFDADDNIMAWGRNDEGKIGIENE 809



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 170/391 (43%), Gaps = 47/391 (12%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTM 108
           G  H   VT+   +Y++G    G+      +    P  + +L  QGI+++  A G   T+
Sbjct: 453 GRNHIAFVTNNKELYTWGKECGGR--KDNVQNTCLPMRMENLHNQGIQVVSVACGEFHTI 510

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            + + G VY++G + +G+   GV  T+    P L+  + +  +V    G + T  ++ + 
Sbjct: 511 ALCEEG-VYSWGSNEYGQL--GVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDY 567

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +VY++ WG   +LG  +  N + P  +   L++  V+Q AAGY +   L  Q     VY+
Sbjct: 568 KVYSWGWGVHGQLGLKSVENQLTPKQI-DLLDSHKVIQAAAGYAHSAVLTSQR---YVYT 623

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG---- 284
            G  L G+LG GS   +  P+L++   L ++   +++ G +    + +D  +  WG    
Sbjct: 624 FGADLYGQLGIGSHYKQVIPQLVDSLTLDSI--YLISCGPFETIAISEDQTIFCWGRNYH 681

Query: 285 ------------WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
                       +GR       +      P+ +Q         +  G++   +++    V
Sbjct: 682 QFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQV 741

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           Y++G  +   LGH    D           P+LV +L  +   ++ +++         + A
Sbjct: 742 YTWGYNDCGQLGHYNKIDQSA--------PRLVKAL--IRRAIIGVAVGAEF-----SVA 786

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQTERGN 423
                 + A+G  D+G++GIE   N+   GN
Sbjct: 787 FDADDNIMAWGRNDEGKIGIE---NEGNLGN 814



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 150/328 (45%), Gaps = 38/328 (11%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAI 156
           + A G      +++  ++Y +GK+  G  +  VQ T L   P  +E+L N  I VV  A 
Sbjct: 449 RIACGRNHIAFVTNNKELYTWGKECGGRKD-NVQNTCL---PMRMENLHNQGIQVVSVAC 504

Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           G F T  L  EG    +SWG++   +LG         P  L+  + +  +V +  G  + 
Sbjct: 505 GEFHTIALCEEG---VYSWGSNEYGQLGVGDTRTRYRP-VLITHISSKQIVSVVCGAYHT 560

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
           LA+    S   VYS G G+ G+LG  S  ++  P+   Q  LL+   V+  AAG  H+AV
Sbjct: 561 LAIT---SDYKVYSWGWGVHGQLGLKSVENQLTPK---QIDLLDSHKVIQAAAGYAHSAV 614

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           +     V T+G   YG LG G+   + +P++V +L       ++ G + T  +SED  ++
Sbjct: 615 LTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIF 674

Query: 334 SFG--------CG--ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
            +G        C   ES+  G    ++ +   H     P+  T   Q+   + QI   N 
Sbjct: 675 CWGRNYHQFYICAKAESSKYGRKMASNTKDLNHR--FYPE--TLQFQLQHPITQIFCGN- 729

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
             W  H   LT   ++Y +G  D GQLG
Sbjct: 730 --W--HYIILTSVNQVYTWGYNDCGQLG 753



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 23/227 (10%)

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
           + + +  + LL T  + P  +IA G  ++   A   +   +Y+ G   GG+  +   T  
Sbjct: 431 KSDSISSNDLLFT--STPRARIACGRNHI---AFVTNNKELYTWGKECGGRKDNVQNT-- 483

Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
             P  +E      +Q V VA G +H   + ++G V +WG   YG LG G+      P ++
Sbjct: 484 CLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLI 542

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
             ++  + + V  G Y T  ++ D  VYS+G G    LG  ++         N LTP+ +
Sbjct: 543 THISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVE--------NQLTPKQI 594

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
             L   + +V+Q +        AH+  LT    +Y FGA   GQLGI
Sbjct: 595 DLLD--SHKVIQAAAGY-----AHSAVLTSQRYVYTFGADLYGQLGI 634



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 15/193 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA AG  HS  +TS+  VY+FG++  GQLG G+  ++  P+ + SL    I   + G   
Sbjct: 604 QAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFE 663

Query: 107 TMLISDAGQVYAFGKDSF-----GEAEYGVQGTKLVTS---------PQLVESLKNIFVV 152
           T+ IS+   ++ +G++        +AE    G K+ ++         P+ ++      + 
Sbjct: 664 TIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPIT 723

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           Q   GN+   +L+   +VYT+ + +  +LGH+ + +   P  L+  L    ++ +A G  
Sbjct: 724 QIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPR-LVKALIRRAIIGVAVGAE 782

Query: 213 YLLALACQPSGMA 225
           + +A     + MA
Sbjct: 783 FSVAFDADDNIMA 795



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 25/169 (14%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALND--VKAIHVATGD 320
           +A G  H A V  +  + TWG     C G   N +   +P  ++ L++  ++ + VA G+
Sbjct: 450 IACGRNHIAFVTNNKELYTWG---KECGGRKDNVQNTCLPMRMENLHNQGIQVVSVACGE 506

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
           + T  + E+G VYS+G  E   LG   + D +  R+  VL   +  S KQ+      +S+
Sbjct: 507 FHTIALCEEG-VYSWGSNEYGQLG---VGDTR-TRYRPVLITHI--SSKQI------VSV 553

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
               Y   HT A+T   K+Y++G G  GQLG++ V NQ     P+++D+
Sbjct: 554 VCGAY---HTLAITSDYKVYSWGWGVHGQLGLKSVENQL---TPKQIDL 596



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 11/115 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G  H I +TS   VY++G N  GQLGH    ++  PR +++L    II  A GA 
Sbjct: 723 TQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAE 782

Query: 106 RTMLISDAGQVYAFGKD-----------SFGEAEYGVQGTKLVTSPQLVESLKNI 149
            ++       + A+G++           + G +    Q    V +P LV  L +I
Sbjct: 783 FSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSSSARQSIYCVLAPTLVHGLPSI 837


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 8/208 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RT 107
           AG  HS  VT+ G +Y++G    G+LGH  +E++ +P+ + +LQG R++  A G+G  +T
Sbjct: 2   AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT 61

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + ++D   V+++G   +G  + G  G+     P  ++SL  + VV+   G+ F+  L++ 
Sbjct: 62  LCLTDDDTVWSWGDGDYG--KLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 119

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VYT+  G+  RLGH ++ +   P  + G L+   V+ IA G   L  + C   G  VY
Sbjct: 120 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG--SLHCVCCTEDG-EVY 175

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + G    G+LG G+    + PRL+   Q
Sbjct: 176 TWGDNDEGQLGDGTTNAIQRPRLVAALQ 203



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 15/199 (7%)

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  +   +G      +  D
Sbjct: 8   ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 67

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
             V +WG G YG LG G  +   VP  + +L  +  + V  G   +  +++ G VY++G 
Sbjct: 68  DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 127

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G+   LGH +          +V  P+ V  L+   ++V+ I+ T S+    H    TE G
Sbjct: 128 GDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDG 172

Query: 398 KLYAFGAGDKGQLGIELVN 416
           ++Y +G  D+GQLG    N
Sbjct: 173 EVYTWGDNDEGQLGDGTTN 191



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--N 158
           AAG   +  ++ AG +Y +GK  +G   +     +L   P+LVE+L+   VV  A G  +
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGD 58

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             T  L+ +  V+++  G+  +LG         P  +  +L  + VV++  G  + +AL 
Sbjct: 59  AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALT 117

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              SG AVY+ G G   +LGHGS    + PR ++  Q    + + +A G+ H     +DG
Sbjct: 118 --KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDG 172

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            V TWG    G LG G       P++V AL   K   VA G   T   S
Sbjct: 173 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 17/149 (11%)

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYT 322
           AAG  H+A V   G + TWG GRYG LGH + E +  PK+V+AL   + + +A  +GD  
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           T  +++D  V+S+G G+   LG    +DG          P  + SL  +   VV++   +
Sbjct: 61  TLCLTDDDTVWSWGDGDYGKLGRGG-SDG-------CKVPMKIDSLTGLG--VVKVECGS 110

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  + ALT+SG +Y +G GD  +LG
Sbjct: 111 QF-----SVALTKSGAVYTWGKGDYHRLG 134



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+A+T  G VY++G     +LGHG+ +   RPR ++ LQG ++I  A G+   +  ++ G
Sbjct: 113 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDG 172

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           +VY +G +   E + G   T  +  P+LV +L+   V + A G+  T   S
Sbjct: 173 EVYTWGDND--EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 10/244 (4%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G N +GQLG GTTE+   P+ I++ +GI I   AAGA  T  +++ G+++ +G   +G 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
              G +  +LV  PQ V S+    +V  A G   T  +S  G +YT+ W    +LGH   
Sbjct: 61  LGLGDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
            + + PH L   L    + QI+ G+ + +AL        +Y  G    G++G G   D  
Sbjct: 119 EDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGK---LYGWGWNKFGQVGAGDNIDHC 174

Query: 247 HPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
            P    Q +    Q V+  +  W H   V     V +WG G  G LGHG     + P ++
Sbjct: 175 SPI---QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 231

Query: 306 QALN 309
           +AL+
Sbjct: 232 EALS 235



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 17/177 (9%)

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LG G+  D   P+ I+ F+ ++++  +VAAGA H A V +DG +  WGWGRYG LG G
Sbjct: 7   GQLGLGTTEDSLVPQKIQAFEGISIK--MVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG 64

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           +     VP+ V +++  K + VA G   T  VS  G +Y++G  +   LGH    D    
Sbjct: 65  DRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFED---- 120

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                L P  + +L+  N  + QIS      W  HT ALT  GKLY +G    GQ+G
Sbjct: 121 ----RLVPHRLEALRGDN--ISQISGG----WR-HTMALTTDGKLYGWGWNKFGQVG 166



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 10/233 (4%)

Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
           +G++  G+   G     LV  PQ +++ + I +   A G   TA ++ +G ++ + WG  
Sbjct: 1   WGRNQNGQLGLGTTEDSLV--PQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58

Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
             LG     + + P  +  +++   +V +A G+ + ++++   S   +Y+ G    G+LG
Sbjct: 59  GNLGLGDRNDRLVPQKV-SSVDGDKMVMVACGWRHTISVS---SLGGLYTYGWSKYGQLG 114

Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           HG   D   P  +E  +  N+  +   +G W H   +  DG++  WGW ++G +G G+  
Sbjct: 115 HGDFEDRLVPHRLEALRGDNISQI---SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171

Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
               P  ++   D K I ++ G   T  V++  +V+S+G G +  LGH    D
Sbjct: 172 DHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVD 224



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H+I+V+S G +Y++G +  GQLGHG  E+   P  + +L+G  I Q + G   TM ++  
Sbjct: 92  HTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 151

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G++Y +G + FG+   G        SP  ++  ++  V+Q + G   T  ++ +  V+++
Sbjct: 152 GKLYGWGWNKFGQVGAGDNIDHC--SPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSW 209

Query: 174 SWGNDARLGH 183
             G + +LGH
Sbjct: 210 GRGTNGQLGH 219



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           SQ   G  H++A+T+ G +Y +G N  GQ+G G   +   P  I+  Q  ++IQ + G  
Sbjct: 136 SQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWR 195

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
            T+ ++D   V+++G+ + G+  +G    +   +P ++E+L
Sbjct: 196 HTLAVTDKQNVFSWGRGTNGQLGHGESVDR--NTPMILEAL 234


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 168/362 (46%), Gaps = 41/362 (11%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           ++++G N++G+LG GTT +   P  +  + GI  ++ A G+  ++ +   G V+ +G ++
Sbjct: 471 LFAWGHNTNGELGDGTTTQRTSPTAVV-VSGI--VKTAGGSAHSVALGAGGAVWTWGYNA 527

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
           +G+   G      V +P  +  +  +  V A + +  T  LS +G V  + +    +LG+
Sbjct: 528 YGQLGNGTT--TQVVTPTQLPGMSGVIDVAAGVNH--TVALSADGTVAAWGYNAYGQLGN 583

Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
            T  N + P  +    E   V  I+AG  + +AL    +   V++ G  L G+LG G+ T
Sbjct: 584 GTTANQLTPQSVP---ELDGVTAISAGSTHTVALKADGT---VWAWGSNLYGQLGDGTFT 637

Query: 244 DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
               P      Q+ +L+ VV +AAG +H   V  DG +  WG+G  G LG G    +SVP
Sbjct: 638 HRSSP-----VQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVP 692

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
             V  L    A+ +A G Y T  +  +G V+++G   S  LG   I      R++ VL P
Sbjct: 693 VQVSGLG--HAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQ----RYSPVLVP 746

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
            L             I+L    Y    T  L   G ++AFG    GQLG       T R 
Sbjct: 747 GLTNV----------IALAAGGY---TTAVLKRDGTVWAFGYNPNGQLGD---GTTTSRS 790

Query: 423 NP 424
           +P
Sbjct: 791 SP 792



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 171/372 (45%), Gaps = 43/372 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++A+   G  + +G NS+GQLG+GTT     P  + +L   + ++  AG   T+     
Sbjct: 356 HTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQD 413

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE---GRV 170
           G +YA+G D+F    YG  GT   TS  +   +    V     G +++    ++    +V
Sbjct: 414 GTLYAWG-DNF----YGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQV 468

Query: 171 YT-FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           +T F+WG++    LG  T      P  ++ +     +V+ A G  + +AL    +G AV+
Sbjct: 469 HTLFAWGHNTNGELGDGTTTQRTSPTAVVVS----GIVKTAGGSAHSVALG---AGGAVW 521

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG+G+ T    P  +     +    + VAAG  H   +  DG V  WG+  
Sbjct: 522 TWGYNAYGQLGNGTTTQVVTPTQLPGMSGV----IDVAAGVNHTVALSADGTVAAWGYNA 577

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           YG LG+G    +  P+ V  L+ V AI  + G   T  +  DG V+++G      LG   
Sbjct: 578 YGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYGQLGDGT 635

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                 +R + V  P L        E VV I+  +      HT A+   G L+ +G G +
Sbjct: 636 FT----HRSSPVQVPSL--------ENVVSIAAGH-----FHTVAVKGDGTLWVWGYGPQ 678

Query: 408 GQLGIELVNNQT 419
           GQLG+    NQ+
Sbjct: 679 GQLGLGTTTNQS 690



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 172/385 (44%), Gaps = 48/385 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AV   G  +S+G+N+ GQLG GTT    RP  +  L G+R +  + G   T+ 
Sbjct: 302 AGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRAL--SGGVVHTVA 359

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G  + +G +S G+   G   T   + P  V +L     + A  G + T    ++G 
Sbjct: 360 LKWDGTAWGWGYNSAGQLGNGT--TTNSSIPVQVAALTQAVEIDA--GGYHTLARRQDGT 415

Query: 170 VYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +Y  +WG++    LG     +   P   PL G      V    AGY Y +A   + +   
Sbjct: 416 LY--AWGDNFYGALGTGNTTSSSVPVQVPLSG------VRWFGAGYYYSVAERKKVNMAQ 467

Query: 226 VYSV---GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           V+++   G    G+LG G+ T    P  +    +     V  A G+ H+  +G  G V T
Sbjct: 468 VHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGI-----VKTAGGSAHSVALGAGGAVWT 522

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG+  YG LG+G       P  +  ++ V  I VA G   T  +S DG V ++G      
Sbjct: 523 WGYNAYGQLGNGTTTQVVTPTQLPGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQ 580

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+           AN LTPQ V  L    + V  IS  ++     HT AL   G ++A+
Sbjct: 581 LGNGTT--------ANQLTPQSVPEL----DGVTAISAGST-----HTVALKADGTVWAW 623

Query: 403 GAGDKGQLGIELVNNQTERGNPERV 427
           G+   GQLG       T R +P +V
Sbjct: 624 GSNLYGQLGDGTF---THRSSPVQV 645



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 22/293 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ V S G ++++G+N SGQLG+G   +   P  +R L   +++ A+AGA  ++ +++ 
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEHSVAVTED 213

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+ +G +++G+   G    + V  P  V  + ++  V AA     T  L  +G V+T+
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAV--PVQVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269

Query: 174 SWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
              +   LG  T  + + P   P L  + N     IAAG  + LA+    S    +S G 
Sbjct: 270 GINSSGELGDGTTTHSLLPIQVPNLSGVTN-----IAAGLWHTLAVKKDGS---AWSWGN 321

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
              G+LG G+  +   P L+     +      ++ G  H   +  DG    WG+   G L
Sbjct: 322 NAYGQLGDGTTLNRLRPVLVAGLTGVR----ALSGGVVHTVALKWDGTAWGWGYNSAGQL 377

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G+G     S+P  V AL   +A+ +  G Y T    +DG +Y++G     +LG
Sbjct: 378 GNGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALG 428



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 163/370 (44%), Gaps = 41/370 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            A AG  HS+AVT  G V+++GSN+ GQLG GT     R  P++      ++  AA   R
Sbjct: 199 SASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTL--RAVPVQVPGMSDVVAVAAAGSR 256

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ +   G V+ +G +S GE   G     L+  P  V +L  +  + A +  + T  + +
Sbjct: 257 TVALKADGTVWTWGINSSGELGDGTTTHSLL--PIQVPNLSGVTNIAAGL--WHTLAVKK 312

Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G  +  SWGN+A  +LG  T  N + P  + G      V  ++ G  + +AL    +  
Sbjct: 313 DGSAW--SWGNNAYGQLGDGTTLNRLRPVLVAGLTG---VRALSGGVVHTVALKWDGT-- 365

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
             +  G    G+LG+G+ T+   P  +        Q V + AG +H     QDG +  WG
Sbjct: 366 -AWGWGYNSAGQLGNGTTTNSSIPVQVAALT----QAVEIDAGGYHTLARRQDGTLYAWG 420

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              YG LG GN    SVP  V  L+ V+      G Y  + V+E   V         + G
Sbjct: 421 DNFYGALGTGNTTSSSVPVQVP-LSGVRWF--GAGYY--YSVAERKKVNMAQVHTLFAWG 475

Query: 345 HNA---IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
           HN    + DG              T+ +     VV   +  +   +AH+ AL   G ++ 
Sbjct: 476 HNTNGELGDG-------------TTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWT 522

Query: 402 FGAGDKGQLG 411
           +G    GQLG
Sbjct: 523 WGYNAYGQLG 532



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 16/253 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++A+++ G V ++G N+ GQLG+GTT  +  P+ +  L G+  I  +AG+  T+ 
Sbjct: 556 AGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVA 613

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + +G+   G    +  +SP  V SL+N  VV  A G+F T  +  +G 
Sbjct: 614 LKADGTVWAWGSNLYGQLGDGTFTHR--SSPVQVPSLEN--VVSIAAGHFHTVAVKGDGT 669

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           ++ + +G   +LG  T  N   P  + G       V IAAG  + +AL        V++ 
Sbjct: 670 LWVWGYGPQGQLGLGTTTNQSVPVQVSGLGH---AVAIAAGGYHTVALLANGQ---VWTW 723

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG  +      P L+    L N+  + +AAG +  AV+ +DG V  +G+   G
Sbjct: 724 GYNSSGQLGDATIIQRYSPVLVP--GLTNV--IALAAGGYTTAVLKRDGTVWAFGYNPNG 779

Query: 290 CLGHGNEECESVP 302
            LG G     S P
Sbjct: 780 QLGDGTTTSRSSP 792



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 23/190 (12%)

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
           SG ++++ G    G+LG+G RT    P  +        Q V  +AGA H+  V +DG V 
Sbjct: 162 SGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN----QVVSASAGAEHSVAVTEDGSVW 217

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           TWG   YG LG G     +VP  V  ++DV A  VA     T  +  DG V+++G   S 
Sbjct: 218 TWGSNAYGQLGDGTNTLRAVPVQVPGMSDVVA--VAAAGSRTVALKADGTVWTWGINSSG 275

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
            LG     DG    H+  L P  V +L  V      +       W  HT A+ + G  ++
Sbjct: 276 ELG-----DGT-TTHS--LLPIQVPNLSGVTNIAAGL-------W--HTLAVKKDGSAWS 318

Query: 402 FGAGDKGQLG 411
           +G    GQLG
Sbjct: 319 WGNNAYGQLG 328



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 19/148 (12%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           V+ G +H   V   G +  WG    G LG+G     + P  V+ LN V  +  + G   +
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQV--VSASAGAEHS 207

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             V+EDG V+++G      LG     DG     A    P  V  +      VV ++   S
Sbjct: 208 VAVTEDGSVWTWGSNAYGQLG-----DGTNTLRA---VPVQVPGMSD----VVAVAAAGS 255

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 T AL   G ++ +G    G+LG
Sbjct: 256 -----RTVALKADGTVWTWGINSSGELG 278


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 10/294 (3%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
           + +T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G
Sbjct: 45  LYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 104

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           +V+ +G +++ +   G      V    +  +L N  V++ A G++ + VL+ +G V+ + 
Sbjct: 105 EVFTWGHNAYNQLGNGTTNHGSVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 163

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             N  ++G  +  N   P  + G L+N  VV IA G   + ++A   SG  VY  G    
Sbjct: 164 CNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACG--QMCSMAVVDSG-EVYVWGYNGN 220

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+LG GS  +   P  I   Q + +Q   VA G  H  V+  DG+V  WG   YG LG G
Sbjct: 221 GQLGLGSSGNHSTPCRIAALQGIRVQR--VACGYAHTLVLTDDGQVYAWGANSYGQLGTG 278

Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
           N+  +S P  V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 279 NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 332



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 47/320 (14%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 16  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEP 75

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 76  RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 135 LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPI--PRRVTGCLQNRV 192

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           VV  A G   +  +   G VY + +  + +LG  +  N   P   +  L+ I V ++A G
Sbjct: 193 VVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTP-CRIAALQGIRVQRVACG 251

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGA 268
           Y + L L        VY+ G    G+LG G+++++ +P   ++E+ +++     + A  +
Sbjct: 252 YAHTLVLT---DDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE----IAACHS 304

Query: 269 WH-AAVVGQDGRVCTWGWGR 287
            H +A   Q G V  WG  R
Sbjct: 305 THTSAAKTQGGHVYMWGQCR 324



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 26/316 (8%)

Query: 92  LQGIRIIQAAAGAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           LQ IR       AG  +L ++   +++  G +  G    G+   +    P+ ++SL    
Sbjct: 28  LQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGC--LGLGDIQSTIEPRRLDSLSGKK 85

Query: 151 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           +   + G+    VL + EG V  F+WG++A  +LG+ T  +   P  +   L N  V+++
Sbjct: 86  IACLSYGSGPHIVLATTEGEV--FTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEV 143

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + L L    S   V++ GC   G++G GS  ++  PR +    L N   V +A G
Sbjct: 144 ACGSYHSLVLT---SDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGC-LQNRVVVNIACG 199

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
              +  V   G V  WG+   G LG G+    S P  + AL  ++   VA G   T V++
Sbjct: 200 QMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLT 259

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           +DG VY++G      L       G GN+ +N   P  V   K   +R+++I+  +S + +
Sbjct: 260 DDGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVVVEK---DRIIEIAACHSTHTS 308

Query: 388 AHTFALTESGKLYAFG 403
           A   A T+ G +Y +G
Sbjct: 309 A---AKTQGGHVYMWG 321



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG 
Sbjct: 106 VFTWGHNAYNQLGNGTTNHGSVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGC 164

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 165 NNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLG 224

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                 G    H+   TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 225 L-----GSSGNHS---TPCRIAALQGI--RVQRVACGY-----AHTLVLTDDGQVYAWGA 269

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 270 NSYGQLGTGNKSNQS 284


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 70  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 129

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 130 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 188

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 189 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 245

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 246 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 303

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
             V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A  
Sbjct: 304 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 363

Query: 360 LTPQLVTSLKQV 371
            TP +   L  V
Sbjct: 364 ATPAVTWRLLSV 375



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 45  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 101

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 102 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 159

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 160 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 215

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 216 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 275

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 276 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 324

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 325 SA---AKTQGGHVYMWG 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 33  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 92

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 93  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 151

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 152 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 209

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 210 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 267

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 268 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 320

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 321 STHTSAAKTQGGHVYMWGQCR 341



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 123 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 181

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 182 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 241

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 242 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 286

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 287 NSYGQLG---TGNKSNQSYPTPVTVE 309


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 72  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 131

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 132 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 190

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 191 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 247

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 248 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
             V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A  
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 365

Query: 360 LTPQLVTSLKQV 371
            TP +   L  V
Sbjct: 366 ATPAVTWRLLSV 377



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 35  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 94

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 95  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 211

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 212 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 269

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 270 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 322

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 323 STHTSAAKTQGGHVYMWGQCR 343



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 47  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 103

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 161

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 162 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 217

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 218 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 278 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 326

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 327 SA---AKTQGGHVYMWG 340



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 244 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 288

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 168/375 (44%), Gaps = 39/375 (10%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGV 63
           K  IF   +EAE Q ++Q C           + G A                +  T    
Sbjct: 6   KWPIFSLCSEAELQLVRQAC-----------VFGSA------------SNELLYTTVNDE 42

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L++  VV IA G   + ++A   +G  V+  G    G+LG GS 
Sbjct: 162 SGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
             V    D    + A H A   +T+   ++ G VY +G C G+S +L H        +  
Sbjct: 277 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVF 333

Query: 357 ANVLTPQLVTSLKQV 371
           A   TP +   L  V
Sbjct: 334 ACFATPAVTWRLLSV 348



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L     +++A G   +  V   G+V+ +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274


>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
 gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
          Length = 1711

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 137/269 (50%), Gaps = 30/269 (11%)

Query: 36   AGEACCRREN--SQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWRPRP 88
            AGE   +R+   SQA     G  H   +T +GV Y++G    G+LGHG    +  + P P
Sbjct: 853  AGEVPVKRKPPLSQAAVVSCGQQHVALLTEEGV-YTWGKPHQGRLGHGQLLGDSGYVP-P 910

Query: 89   IR----SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
            +R    S+Q ++++  A G   T+ + D G VYA+G  ++G+   G+      T P LV 
Sbjct: 911  MRVETLSIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQ--LGLGDWDRQTHPTLVT 967

Query: 145  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
             LK++F V  A G + +A L  EGRV+ + WG   +LG     N  +PH L+  ++N   
Sbjct: 968  QLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPH-LVAAVQN--A 1024

Query: 205  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
            VQ++ GY +   L    SG  V++ GCGL G+LGHG+      P+ ++       Q   V
Sbjct: 1025 VQVSTGYAHTAVLT--RSG-EVFTFGCGLHGQLGHGATDKVSIPQRVQGIMGKVAQ---V 1078

Query: 265  AAGAWHAAVVGQDGRVCTWG-----WGRY 288
            A G +H  VV    +V T+G     W +Y
Sbjct: 1079 ACGLFHTVVVTSSQQVYTFGRHPQVWKQY 1107



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 40/262 (15%)

Query: 153  QAAI---GNFFTAVLSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLEN 201
            QAA+   G    A+L+ EG VYT+   +  RLGH        +  P  VE      +++ 
Sbjct: 866  QAAVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVE----TLSIQR 920

Query: 202  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
            + V+ +A G  + LAL        VY+ G    G+LG G    + HP L+ Q +  ++  
Sbjct: 921  VQVMAVACGQEHTLALC----DNGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLK--DVFC 974

Query: 262  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
            V VA G +H+A +  +GRV  WGWG +G LG GN E  + P +V A+ +  A+ V+TG  
Sbjct: 975  VAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQN--AVQVSTGYA 1032

Query: 322  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
             T V++  G+V++FGCG    LGH A           V  PQ V   + +  +V Q++  
Sbjct: 1033 HTAVLTRSGEVFTFGCGLHGQLGHGAT--------DKVSIPQRV---QGIMGKVAQVAC- 1080

Query: 382  NSIYWNAHTFALTESGKLYAFG 403
              ++   HT  +T S ++Y FG
Sbjct: 1081 -GLF---HTVVVTSSQQVYTFG 1098



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 21/189 (11%)

Query: 226  VYSVGCGLGGKLGHGSRTDEK---HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            VY+ G    G+LGHG    +     P  +E   +  +Q + VA G  H   +  +G V  
Sbjct: 885  VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG-VYA 943

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
            WG   YG LG G+ + ++ P +V  L DV  + VATG Y +  +  +G V+ +G G    
Sbjct: 944  WGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQ 1003

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
            LG       QGN   N+  P LV ++    +  VQ+S        AHT  LT SG+++ F
Sbjct: 1004 LG-------QGNA-ENLNKPHLVAAV----QNAVQVSTGY-----AHTAVLTRSGEVFTF 1046

Query: 403  GAGDKGQLG 411
            G G  GQLG
Sbjct: 1047 GCGLHGQLG 1055



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 157/345 (45%), Gaps = 45/345 (13%)

Query: 101  AAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESL--KNIFVVQAAIG 157
            + G     L+++ G VY +GK   G   +G + G      P  VE+L  + + V+  A G
Sbjct: 871  SCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACG 929

Query: 158  NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYL 214
               T  L   G    ++WG+    +LG      D + HP L T L+++  V +A G  + 
Sbjct: 930  QEHTLALCDNG---VYAWGSSTYGQLG--LGDWDRQTHPTLVTQLKDVFCVAVATGQYHS 984

Query: 215  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
             AL  +     V+  G G+ G+LG G+  +   P L+   Q      V V+ G  H AV+
Sbjct: 985  AALDGEGR---VWMWGWGVHGQLGQGNAENLNKPHLVAAVQ----NAVQVSTGYAHTAVL 1037

Query: 275  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
             + G V T+G G +G LGHG  +  S+P+ VQ +   K   VA G + T VV+    VY+
Sbjct: 1038 TRSGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYT 1096

Query: 335  FG---------CGESASLGHNAIADGQGN-RHANVLTPQLVTSL---KQVNERVVQIS-- 379
            FG            S      + +  Q   +HA  L+ +L   L    +V  R+ Q+   
Sbjct: 1097 FGRHPQVWKQYLQNSRRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAG 1156

Query: 380  ------LTNSIYWNA----HTFALTESGKLYAFGAGDKGQLGIEL 414
                  LT+S+   A     + A+  SGK++ +G    GQLGI++
Sbjct: 1157 AVHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQLGIDM 1201


>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
          Length = 464

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)

Query: 49  IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    I+ AA G   
Sbjct: 96  VSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNH 155

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ +++ G VYAFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  
Sbjct: 156 TLALTETGSVYAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPI--TKMACGAEFSMIMDC 213

Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
           +G +Y+F      +LGH+++            D E  P              +  + N+ 
Sbjct: 214 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 273

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         
Sbjct: 274 VRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 330

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           + AG   +  V + G +  WG        + + E    PK VQ L   K   +A G  ++
Sbjct: 331 IYAGYTCSFAVSETGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 383

Query: 324 FVVSEDGDVYSFG 336
            +V+ D    S+G
Sbjct: 384 IIVAADESTISWG 396



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G VY+FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 149 AACGRNHTLALTETGSVYAFGENKMGQLGLG-NQTDAVPSPTQIMYNGQPITKMACGAEF 207

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 208 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 266

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 267 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 324

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY    A++ +  G+  +           + SR    +P+ ++      ++
Sbjct: 325 GRGAAQIYAGYTCSFAVS-ETGGLFFWGA--------TNTSRESTMYPKAVQDLCGWKIR 375

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 376 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 432

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 433 MGYAHSLVIARD 444



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 81  PH-RYGCLSGVQVRSVVSGPCAAHSLLITAEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 138

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E   +L  + +V+AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 139 E---VLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQT-DAVPSPTQIMYN 194

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 195 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 254

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 255 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 305



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 134/330 (40%), Gaps = 67/330 (20%)

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 60  GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPCAAHSL-------------- 105

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL   
Sbjct: 106 --LITAEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTET 162

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
            S   VY+ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 163 GS---VYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 215

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 216 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 275

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 276 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 327

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             QI    +      +FA++E+G L+ +GA
Sbjct: 328 AAQIYAGYTC-----SFAVSETGGLFFWGA 352



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 79  WGPHRYGCL--------SGVQVRSVVSGPCAAH-------SLLITAEGKLWSWGRNEKGQ 123

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G +YAF
Sbjct: 124 LGH-----GDTKR---VEAPKLIEVLG--SEAIVLAACGRN-----HTLALTETGSVYAF 168

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 169 GENKMGQLGL---GNQTD 183



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 316 RLVKLFDFPG-----RGAAQIYAGYTCSFAVSETGGLFFWGATNTSR------ESTMYPK 364

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G +I   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 365 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 424

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            I+  Q A+G   + V++R+
Sbjct: 425 GIYTEQVAMGYAHSLVIARD 444


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 16/289 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + +L G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V + A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRIAALQGIRIQ--RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H
Sbjct: 301 APVVVEKDRIVEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 346



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
           ++ ++   G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   ++  A
Sbjct: 152 KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIA 211

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   +M + + G+VY +G +  G+   G  G +   +P  + +L+ I + + A G   T
Sbjct: 212 CGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRIQRVACGYAHT 269

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            VL+ EG+VY +   +  +LG   + N   P P++  +E   +V+IAA
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIVEIAA 315



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV + G VY +G N +GQLG G++  +  P  I +LQGIRI + A G   T++++D G
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVYA+G +S+G+   G +  +   +P +VE  K+  V  AA  +  T+    +G  + + 
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPAPVVVE--KDRIVEIAACHSAHTSAAKTQGG-HVYM 333

Query: 175 WG 176
           WG
Sbjct: 334 WG 335



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRIAALQGIRIQRVACGY-------AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 32/296 (10%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL------------QGIRIIQAA 101
           H+  VT +G ++++G  S G+LGHG   +  +PR + SL            +G+++    
Sbjct: 271 HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVT 330

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   T L++   Q++ FG  +FG   +G +    V  P+ VESL  +  +  A G + T
Sbjct: 331 CGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGVWHT 388

Query: 162 AVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           A +              G+++T+  G+  RLGH  +   ++P  +   +E     ++A G
Sbjct: 389 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE-YNFQKVACG 447

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
           +   + L    SG  V ++G  + G+LG+  ++D K P  +E  +LL      +A GA+H
Sbjct: 448 HSLTVGLTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYH 502

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
            AV+     V TWG G  G LGHG+ E    P +V+ L D    ++A G +YT  +
Sbjct: 503 VAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 558



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 41/298 (13%)

Query: 137 VTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
           V    LV+ L++  V+     A G    A+++R+G ++T+   +  RLGH    + ++P 
Sbjct: 245 VICDNLVKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR 304

Query: 194 PLLGTLENIPV---------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
            L+ +L    V         +Q+A+  C     A   +   +++ G G  G LGHG + +
Sbjct: 305 -LVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN 363

Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGH 293
             +PR +E   L  L+ + VA G WH A V +            G++ TWG G    LGH
Sbjct: 364 VAYPREVES--LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH 421

Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           G++E    P  V AL +     VA G   T  ++  G V + G      LG N  +DG+ 
Sbjct: 422 GDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGK- 479

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                   P  V   K + E V +I+     Y   H   LT   ++Y +G G  G+LG
Sbjct: 480 -------LPCFVED-KLLGECVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 524



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 37/306 (12%)

Query: 87  RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
           +P+ S   + +   A G     L++  G+++ +G++S G   +GV   + V  P+LVESL
Sbjct: 252 KPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVESL 309

Query: 147 ------------KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
                       + + V     G + TA+++   +++TF  G    LGH  + N   P  
Sbjct: 310 AFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPRE 369

Query: 195 LLGTLENIPVVQIAAGYCYLLAL--------ACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
           +  +L  +  + +A G  +  A+        +   S   +++ G G   +LGHG +    
Sbjct: 370 V-ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 428

Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKV 304
            P  +      N Q V       H+  VG    G+VCT G   YG LG+   + +    V
Sbjct: 429 KPTCVPALIEYNFQKVACG----HSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKLPCFV 484

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
              L       +A G Y   V++   +VY++G G +  LGH  I D +        TP L
Sbjct: 485 EDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRK--------TPTL 536

Query: 365 VTSLKQ 370
           V +LK 
Sbjct: 537 VETLKD 542


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 172/381 (45%), Gaps = 39/381 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           A AG  HS+   S G V+++G+N+SGQLG+G +      P  ++ L+G+  +  AAG   
Sbjct: 203 ASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAV--AAGGLY 260

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G ++A+G +  G  + G   T  ++S   V  L    VV  A G+  +  +  
Sbjct: 261 SLALRSDGTLWAWGSNDHG--QRGDGSTVYLSSSVRVRWLSG--VVAMAAGSAHSLAVRS 316

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G ++ +      +LG  T  +   P  + G      VV +AAG  + +AL    +   V
Sbjct: 317 DGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR---VVAVAAGDGHSIALCADGT---V 370

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           ++ G    G+L HGS  D   P  + +   +    V VAAGA H+  V  DG V  WG+ 
Sbjct: 371 WTWGYNHDGQLAHGSTNDSPVPLHVRELSGV----VAVAAGALHSLAVLSDGSVWAWGYN 426

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           R G LG G+    + P  VQ L+ V A  V+ G   +     DG V+++G      LG  
Sbjct: 427 RQGQLGDGSLSSSAEPVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLGEG 484

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                     +N L P  V  L  V         T S  +N H+ A    G L+A+G   
Sbjct: 485 TT--------SNALVPVRVRGLSGVE--------TISAGFN-HSLARASDGGLWAWGGNY 527

Query: 407 KGQLGIELVNNQTERGNPERV 427
            GQLG    +N +    P RV
Sbjct: 528 TGQLGDGTTSNSSV---PVRV 545



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 169/367 (46%), Gaps = 35/367 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  +S+A+ S G ++++GSN  GQ G G+T        +R L G+  +  AAG+  ++ 
Sbjct: 256 AGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLSGV--VAMAAGSAHSLA 313

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G ++A+G + +G+   G +  K   +P+ V+ L  +  V A  G+  +  L  +G 
Sbjct: 314 VRSDGTLWAWGANYYGQLGDGTR--KDHDTPKRVQGLSRVVAVAA--GDGHSIALCADGT 369

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+T+ + +D +L H +  ND  P PL    E   VV +AAG  + LA+    S   V++ 
Sbjct: 370 VWTWGYNHDGQLAHGST-ND-SPVPLH-VRELSGVVAVAAGALHSLAVLSDGS---VWAW 423

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG GS +    P  ++    +      V+AG  H+   G DG V  WG   +G
Sbjct: 424 GYNRQGQLGDGSLSSSAEPVRVQGLSGV----AAVSAGLNHSLARGTDGGVWAWGGNSFG 479

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G      VP  V+ L+ V+ I  + G   +   + DG ++++G   +  LG    +
Sbjct: 480 QLGEGTTSNALVPVRVRGLSGVETI--SAGFNHSLARASDGGLWAWGGNYTGQLGDGTTS 537

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
                   N   P  V  L  V      ++         H+ A+   G ++A+G    GQ
Sbjct: 538 --------NSSVPVRVQGLSGVAAVFAGLN---------HSLAVRTDGSVWAWGINSFGQ 580

Query: 410 LGIELVN 416
           LG    N
Sbjct: 581 LGEGTTN 587



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 182/383 (47%), Gaps = 45/383 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+++G N+ GQLG G+++    P  +R L G  ++  +AG G ++ 
Sbjct: 3   AGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSG--VVAVSAGEGHSLA 60

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+   G   +   + P  V  L  +  V A  G+  +  L  +G 
Sbjct: 61  LHRDGTVWAWGDNALGQLGDGTSDSH--SEPVRVPGLSGVVAVSA--GDNHSLALRSDGS 116

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
           V+ +   N  +LG    P   + + +   LE++  VV +AAG  + LA+    +   V++
Sbjct: 117 VWAWGDNNSDQLG--GAPG-AQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGT---VWA 170

Query: 229 VGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 286
            G    G+LG G+  T    P+     Q+  L  VV A+  W H+ V   DG V  WG  
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPK-----QVQGLSGVVAASAGWAHSMVALSDGSVWAWGNN 225

Query: 287 RYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             G LG+G +    ++P+ VQ L  V A  VA G   +  +  DG ++++G  +     H
Sbjct: 226 TSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSND-----H 278

Query: 346 NAIADGQGNRHANVLTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
               DG         T  L +S++ +    VV ++       +AH+ A+   G L+A+GA
Sbjct: 279 GQRGDGS--------TVYLSSSVRVRWLSGVVAMAAG-----SAHSLAVRSDGTLWAWGA 325

Query: 405 GDKGQLGIELVNNQTERGNPERV 427
              GQLG      + +   P+RV
Sbjct: 326 NYYGQLGD---GTRKDHDTPKRV 345



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 22/298 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHSIA+ + G V+++G N  GQL HG+T +   P  +R L G  ++  AAGA  ++ 
Sbjct: 356 AGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSG--VVAVAAGALHSLA 413

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G+   G   +     P  V+ L  +  V A + +     L+R   
Sbjct: 414 VLSDGSVWAWGYNRQGQLGDGSLSSS--AEPVRVQGLSGVAAVSAGLNHS----LARGTD 467

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              ++WG ++  +LG  T  N + P  + G L  +    I+AG+ + LA A       ++
Sbjct: 468 GGVWAWGGNSFGQLGEGTTSNALVPVRVRG-LSGVET--ISAGFNHSLARASDG---GLW 521

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G+ ++   P  ++    +      V AG  H+  V  DG V  WG   
Sbjct: 522 AWGGNYTGQLGDGTTSNSSVPVRVQGLSGV----AAVFAGLNHSLAVRTDGSVWAWGINS 577

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           +G LG G       P  VQ L+ ++   VA G   +  V  DG ++S+G      LGH
Sbjct: 578 FGQLGEGTTNTSFAPVRVQGLSGMET--VAAGSLHSLSVGSDGSMWSWGNNHHGQLGH 633



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 168/389 (43%), Gaps = 57/389 (14%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V+++G N+S QLG G    +    P R      ++  AAG   ++ 
Sbjct: 103 AGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLA 161

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           +   G V+A+G +  G+      G  L T   P+ V+ L    VV A+ G   + V   +
Sbjct: 162 VRADGTVWAWGDNFAGQLG---DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSD 216

Query: 168 GRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
           G V+  +WGN+          +G+   P  V+   L G      V+ +AAG  Y LAL  
Sbjct: 217 GSVW--AWGNNTSGQLGNGISVGYGALPEQVQG--LRG------VMAVAAGGLYSLALRS 266

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
             +  A         G   HG R D     L    ++  L  VV +AAG+ H+  V  DG
Sbjct: 267 DGTLWAW--------GSNDHGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDG 318

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            +  WG   YG LG G  +    PK VQ L+ V A  VA GD  +  +  DG V+++G  
Sbjct: 319 TLWAWGANYYGQLGDGTRKDHDTPKRVQGLSRVVA--VAAGDGHSIALCADGTVWTWGYN 376

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               L H +  D     H   L+  +  +   +                 H+ A+   G 
Sbjct: 377 HDGQLAHGSTNDSPVPLHVRELSGVVAVAAGAL-----------------HSLAVLSDGS 419

Query: 399 LYAFGAGDKGQLGIELVNNQTERGNPERV 427
           ++A+G   +GQLG   +++  E   P RV
Sbjct: 420 VWAWGYNRQGQLGDGSLSSSAE---PVRV 445



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 20/247 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+AV S G V+++G N  GQLG G+      P  ++ L G+  +  +AG   ++ 
Sbjct: 406 AGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLSGVAAV--SAGLNHSLA 463

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
               G V+A+G +SFG+   G     LV  P  V  L  +  + A     F   L+R   
Sbjct: 464 RGTDGGVWAWGGNSFGQLGEGTTSNALV--PVRVRGLSGVETISAG----FNHSLARASD 517

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
              ++WG +   +LG  T  N   P  + G      V  + AG  + LA+    S   V+
Sbjct: 518 GGLWAWGGNYTGQLGDGTTSNSSVPVRVQGL---SGVAAVFAGLNHSLAVRTDGS---VW 571

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G+      P  ++    +      VAAG+ H+  VG DG + +WG   
Sbjct: 572 AWGINSFGQLGEGTTNTSFAPVRVQGLSGME----TVAAGSLHSLSVGSDGSMWSWGNNH 627

Query: 288 YGCLGHG 294
           +G LGHG
Sbjct: 628 HGQLGHG 634



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 142/316 (44%), Gaps = 40/316 (12%)

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           AAG   ++ +   G V+A+G ++ G+   G   +   + P  V  L  +  V A  G+  
Sbjct: 2   AAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSH--SEPVRVRGLSGVVAVSAGEGHSL 59

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
              L R+G V+  +WG++A  +LG  T  +  EP  + G      VV ++AG  + LAL 
Sbjct: 60  --ALHRDGTVW--AWGDNALGQLGDGTSDSHSEPVRVPGL---SGVVAVSAGDNHSLALR 112

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
              S   V++ G     +LG G+   + +  P  +E       + V VAAG  H+  V  
Sbjct: 113 SDGS---VWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLS----EVVAVAAGGNHSLAVRA 164

Query: 277 DGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DG V  WG    G LG GN      +PK VQ L+ V A   + G   + V   DG V+++
Sbjct: 165 DGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAW 222

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G   S  LG N I+ G G        P+ V  L     R V       +Y    + AL  
Sbjct: 223 GNNTSGQLG-NGISVGYG------ALPEQVQGL-----RGVMAVAAGGLY----SLALRS 266

Query: 396 SGKLYAFGAGDKGQLG 411
            G L+A+G+ D GQ G
Sbjct: 267 DGTLWAWGSNDHGQRG 282



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 21/149 (14%)

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           +AAG  H+  +  DG V  WG    G LG G+ +  S P  V+ L+ V A  V+ G+  +
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSGVVA--VSAGEGHS 58

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTN 382
             +  DG V+++G      LG     DG  + H+  V  P L          VV +S  +
Sbjct: 59  LALHRDGTVWAWGDNALGQLG-----DGTSDSHSEPVRVPGL--------SGVVAVSAGD 105

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +     H+ AL   G ++A+G  +  QLG
Sbjct: 106 N-----HSLALRSDGSVWAWGDNNSDQLG 129


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 10/208 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
           G  HS A+T+ G V ++G    G+LGHG +E++ RP+ + +L G R I  A G+G  +T+
Sbjct: 27  GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 86

Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            I+D   V+++G   +G+    G  G KL   P  +ESL  + VV+   G+ F+  L++ 
Sbjct: 87  CITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKS 143

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G VYT+  G+  RLGH +  +   P   +  L+   ++ IA G   L  +AC  SG  VY
Sbjct: 144 GAVYTWGKGDFHRLGHGSVDHVRRPKK-VAALQGKKIISIATG--SLHCVACSDSG-EVY 199

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + G    G+LG G+ T  + PRL+   Q
Sbjct: 200 TWGDNDEGQLGDGTVTAIQWPRLVTALQ 227



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           P+LVE L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L
Sbjct: 10  PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEAL 68

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
                + IA G      L C      V+S G G  GKLG G     K P  IE   L  L
Sbjct: 69  LGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGL 125

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
             V V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG
Sbjct: 126 GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATG 185

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
                  S+ G+VY++G  +   LG   +   Q         P+LVT+L+   + +V+++
Sbjct: 186 SLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQW--------PRLVTALQ--GKHIVKVT 235

Query: 380 LTNSIYWNAHTFALTES 396
                  +AHT AL+ S
Sbjct: 236 CG-----SAHTLALSTS 247



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 22/219 (10%)

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E  
Sbjct: 12  LVEHLNGMSVADIACGSAHSAAITA--SG-HVLTWGKGRYGRLGHGDSEDQLRPKLVE-- 66

Query: 255 QLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
            LL  + + +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  + 
Sbjct: 67  ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 126

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            + V  G   +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--G 176

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 177 KKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 210



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 10/253 (3%)

Query: 77  HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
           HG      RP+ +  L G+ +   A G+  +  I+ +G V  +GK  +G   +G    +L
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL 60

Query: 137 VTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
              P+LVE+L     +  A   G+  T  ++ +  V+++  G+  +LG         P+ 
Sbjct: 61  --RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK 118

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            + +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + P+ +   
Sbjct: 119 -IESLAGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDFHRLGHGSVDHVRRPKKVAAL 174

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
           Q    + + +A G+ H       G V TWG    G LG G       P++V AL     +
Sbjct: 175 Q--GKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIV 232

Query: 315 HVATGDYTTFVVS 327
            V  G   T  +S
Sbjct: 233 KVTCGSAHTLALS 245



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G   S+A+T  G VY++G     +LGHG+ +   RP+ + +LQG +II  A G+   +  
Sbjct: 133 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 192

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           SD+G+VY +G +   E + G      +  P+LV +L+   +V+   G+  T  LS
Sbjct: 193 SDSGEVYTWGDND--EGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLALS 245



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G   ++ +T    V+S+G    G+LG G ++    P  I SL G+ +++   G+  ++ 
Sbjct: 80  SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 139

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++ +G VY +GK  F    +G      V  P+ V +L+   ++  A G+      S  G 
Sbjct: 140 LTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 197

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           VYT+   ++ +LG  T      P  L+  L+   +V++  G  + LAL+
Sbjct: 198 VYTWGDNDEGQLGDGTVTAIQWPR-LVTALQGKHIVKVTCGSAHTLALS 245



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 13/119 (10%)

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           HGN      PK+V+ LN +    +A G   +  ++  G V ++G G    LGH    D  
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ- 59

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                  L P+LV +L  +  R + I+  +    +A T  +T+   ++++G GD G+LG
Sbjct: 60  -------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKLG 106


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 156/371 (42%), Gaps = 34/371 (9%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
            SQA  G  HS AV S G +Y++G NS GQLG  T ++ +  P    +  G+  +  +AG 
Sbjct: 711  SQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGY 770

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
            G ++ ++  G +Y++G +S G+    V        P  VE+   I  VQA+ G      L
Sbjct: 771  GFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVAL 830

Query: 165  SREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQP 221
            S +G +YT  WG+++  +LG     N+    P    T  ++    ++AG  + +A+  Q 
Sbjct: 831  SSDGNIYT--WGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQ- 887

Query: 222  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
                VY+ G    G+LG  S T     +  +      +     +AG  H+  V  DG + 
Sbjct: 888  --GDVYTWGDNTHGELGR-STTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIY 944

Query: 282  TWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
            TWG    G LG   N      P        V     + G   +  +  DG +Y++G    
Sbjct: 945  TWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGK 1004

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             S G          R   V TP               I+ T +    ++  AL   G LY
Sbjct: 1005 TSAG----------RPNKVDTP-------------AGITFTQASAGASYCLALGSDGNLY 1041

Query: 401  AFGAGDKGQLG 411
            ++G   KGQLG
Sbjct: 1042 SWGDNAKGQLG 1052



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 159/393 (40%), Gaps = 57/393 (14%)

Query: 41  CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQ 99
            + E SQAIA         S G +Y +G N       GT E+E R P  +    G+   Q
Sbjct: 175 AKEEGSQAIA---------SDGNLYRWGDN---NYKLGTPEDEKRTPSLVNPPTGVHFTQ 222

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVESLKNIFVVQ 153
            + G    + I   G +Y++G ++ GE      +       ++   P+LV     +   Q
Sbjct: 223 VSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQ 282

Query: 154 AAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN--DVEPHPLLGTLENIP-----V 204
           A  G + +  L  +G +Y  SWG +    LG  T     DV+P  +     N+P     +
Sbjct: 283 ACAGKWHSLALGSDGNLY--SWGENKYGELGRDTGSAIYDVKPGKV-----NLPKGITKI 335

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQP 261
            QI+AG  Y +AL    S   +YS G     +LG    G    ++ PR +     +  + 
Sbjct: 336 TQISAGTFYSMALD---SDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVK-KF 391

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC--ESVP-KVVQALNDVKAIHVAT 318
             + AG W +     DG + +WGW  YG LG        +  P KV       K   V+ 
Sbjct: 392 TWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSA 451

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
               +  +  DG++YS+G  +   LG +  +     +   V TP  V    +V+      
Sbjct: 452 EHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQFTEVSAGY--- 508

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
                    +H+ A+   G LY++G    G+LG
Sbjct: 509 ---------SHSLAIGSDGNLYSWGQNKYGELG 532



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 121/300 (40%), Gaps = 16/300 (5%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRT 107
            AG G S+A+ S G +YS+G NS GQLG   T      RP  + +  GI  +QA+AG    
Sbjct: 768  AGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHV 827

Query: 108  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            + +S  G +Y +G +S G+    V        P   ++  ++     + G   T  +  +
Sbjct: 828  VALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQ 887

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G VYT+       LG  T     +      T   I   Q +AG  + +A++   S   +Y
Sbjct: 888  GDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGS---IY 944

Query: 228  SVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            + G    G+LG  +  T    P   +    +       +AG  H+  +G DG + TW   
Sbjct: 945  TWGDTANGRLGRDTNITPADKPGKADTPAGVTF--TQASAGGKHSIALGSDGSLYTW--- 999

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
                 G   +     P  V     +     + G      +  DG++YS+G      LG +
Sbjct: 1000 -----GDSGKTSAGRPNKVDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRD 1054



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 36/293 (12%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH--GTTEEEWRPRPIRSLQGI-RIIQAAA 102
           +QA AG  HS+A+ S G +YS+G N  G+LG   G+   + +P  +   +GI +I Q +A
Sbjct: 281 TQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISA 340

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           G   +M +   G +Y++G +++ E         +  +  + +T P  V+    I      
Sbjct: 341 GTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWI-----K 395

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCY 213
            G + +   S +G +Y++ W    +LG +T P   D  P  +          +++A + +
Sbjct: 396 AGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRH 455

Query: 214 LLALACQPSGMAVYSVG---CGLGGKLGHGSRTDEKH-----PRLIEQFQLLNLQPVVVA 265
            LAL    S   +YS G   C   G+    ++ D K      P  + QF         V+
Sbjct: 456 SLALG---SDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQF-------TEVS 505

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVA 317
           AG  H+  +G DG + +WG  +YG LG     + +S P +V    D K + V+
Sbjct: 506 AGYSHSLAIGSDGNLYSWGQNKYGELGRPTSGKYDSSPGMVAFPEDPKPVDVS 558



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 142/352 (40%), Gaps = 46/352 (13%)

Query: 86   PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
            P P R   GIRI QA  G   +  +   G +Y +G +S G+        K  + P   E+
Sbjct: 702  PPPAR---GIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT-ADKPDSHPSKAEA 757

Query: 146  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDV--EPHPLLGTLEN 201
               +  V  + G  F+  L+ +G +Y  SWG+++R  LG     N+    PH +      
Sbjct: 758  PAGVTFVHVSAGYGFSVALASDGSLY--SWGDNSRGQLGRTVTSNNPANRPHKVEAPA-G 814

Query: 202  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
            I  VQ +AG  +++AL+   S   +Y+ G    G+LG    ++    +  +     ++  
Sbjct: 815  ITFVQASAGGSHVVALS---SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTF 871

Query: 262  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA----IHVA 317
              V+AG  H   V   G V TWG   +G LG       S P       D  A       +
Sbjct: 872  TSVSAGQGHTVAVDTQGDVYTWGDNTHGELG---RSTTSTPADKPGKADTPAGITFTQAS 928

Query: 318  TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
             G+  +  VS+DG +Y++G   +  LG +       ++     TP  VT           
Sbjct: 929  AGESHSVAVSDDGSIYTWGDTANGRLGRDTNIT-PADKPGKADTPAGVT----------- 976

Query: 378  ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
               T +     H+ AL   G LY +G  D G+         T  G P +VD 
Sbjct: 977  --FTQASAGGKHSIALGSDGSLYTWG--DSGK---------TSAGRPNKVDT 1015


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 162 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
             V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A  
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 336

Query: 360 LTPQLVTSLKQV 371
            TP +   L  V
Sbjct: 337 ATPAVTWRLLSV 348



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 66  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 182

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 240

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 293

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 294 STHTSAAKTQGGHVYMWGQCR 314



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 18  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 74

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 75  KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 132

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 133 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 188

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 189 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 249 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 297

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 298 SA---AKTQGGHVYMWG 311



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 260 NSYGQLG---TGNKSNQSYPTPVTVE 282


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 163/326 (50%), Gaps = 33/326 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +G  H++ ++  G V+S GSN +G+LG G   E  +   P+     + IIQ +AG   +M
Sbjct: 54  SGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSM 113

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
            +SD G+++A+G +S G  +  + G  L + +P+ V SL     VQ A G   T  L+  
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGG 169

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           GRV+ +   +D R+ H   P +VE         +IP+VQI+AG  + +AL    SG  ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------IFISIPIVQISAGNLFTMALTA--SG-TLF 218

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG  +  D  +P  +      N+  VV V  G  H+  +  +GRV + G  
Sbjct: 219 AWGKNEEGQLGDFTNKDVVNPCAVP-----NINSVVAVECGDSHSIALTHEGRVFSCGSD 273

Query: 287 RYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            +G LG G     ++  + +  +       +A G   T VV+ +G +++FG   +  LGH
Sbjct: 274 SFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH 332

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQV 371
                  GN   N +TP+++ S++ V
Sbjct: 333 -------GNTR-NQITPRVIDSVENV 350



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q  AG  HS+AV+  G ++++GSNS GQL   G       P+ + SL     +Q A GA 
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLP--ETVQVACGAS 161

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T+ ++  G+V+ +G+ S G   +         SP  VE   +I +VQ + GN FT  L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVEIFISIPIVQISAGNLFTMALT 212

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 224
             G ++ +    + +LG  T  + V P      + NI  VV +  G  + +AL  +    
Sbjct: 213 ASGTLFAWGKNEEGQLGDFTNKDVVNP----CAVPNINSVVAVECGDSHSIALTHEGR-- 266

Query: 225 AVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
            V+S G    G+LG G     ++  R I   ++L      +A G  H  VV  +G++ T+
Sbjct: 267 -VFSCGSDSFGQLGCGQPNRSQNCMRGIT--EMLGSHVTRIACGRCHTIVVA-NGKMHTF 322

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
           G    G LGHGN   +  P+V+ ++ +V ++
Sbjct: 323 GLNSNGQLGHGNTRNQITPRVIDSVENVASV 353



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 155/361 (42%), Gaps = 48/361 (13%)

Query: 64  VYSFGSNSSGQLGH--GTTEEEWR----PR-----PIRSLQGIRIIQAAAGAGRTMLISD 112
           +Y FG    GQLG    + E + +    PR     P R   G+ +   A+G   T+ +SD
Sbjct: 6   LYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQ-NGVIVKSIASGERHTLFLSD 64

Query: 113 AGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
            G+V++ G +  GE    GV+       P  + S   + ++Q + G   +  +S +GR+ 
Sbjct: 65  DGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDGRL- 121

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVG 230
            F+WG+++  G      D+        + ++P  VQ+A G  + ++L     G  V+  G
Sbjct: 122 -FAWGSNSH-GQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLN---GGGRVFIWG 176

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G++ H        P  +E F  +++  V ++AG      +   G +  WG    G 
Sbjct: 177 QQSDGRIRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQ 227

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG    +    P  V  +N V A  V  GD  +  ++ +G V+S G      LG      
Sbjct: 228 LGDFTNKDVVNPCAVPNINSVVA--VECGDSHSIALTHEGRVFSCGSDSFGQLGC----- 280

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           GQ NR  N +    +T +  +   V +I+         HT  +  +GK++ FG    GQL
Sbjct: 281 GQPNRSQNCMRG--ITEM--LGSHVTRIACG-----RCHTIVVA-NGKMHTFGLNSNGQL 330

Query: 411 G 411
           G
Sbjct: 331 G 331



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 58/315 (18%)

Query: 115 QVYAFGKDSFGEAEYGVQ------GTKLVTSPQLV---ESLKNIFVVQA-AIGNFFTAVL 164
           Q+Y FG    G+ + G +        +++  P+LV    + +N  +V++ A G   T  L
Sbjct: 5   QLYVFG--CAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFL 62

Query: 165 SREGRVYTFSWGNDARLGH---HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           S +G+V++     +  LG          + P  +  T   + ++QI+AG  + +A++   
Sbjct: 63  SDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISST---VSIIQISAGRSHSMAVS--- 116

Query: 222 SGMAVYSVGCGLGGKLGH-----GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
               +++ G    G+L        S T ++ P L E  Q        VA GA H   +  
Sbjct: 117 DDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQ--------VACGASHTVSLNG 168

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            GRV  WG    G + H        P  V+    +  + ++ G+  T  ++  G ++++G
Sbjct: 169 GGRVFIWGQQSDGRIRHS-------PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWG 221

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
             E   LG     D        V+ P  V ++  V    V +   +S     H+ ALT  
Sbjct: 222 KNEEGQLGDFTNKD--------VVNPCAVPNINSV----VAVECGDS-----HSIALTHE 264

Query: 397 GKLYAFGAGDKGQLG 411
           G++++ G+   GQLG
Sbjct: 265 GRVFSCGSDSFGQLG 279



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)

Query: 288 YGCLGHGN-----EECES------VPKVVQAL----NDVKAIHVATGDYTTFVVSEDGDV 332
           +GC G G      +  ES      VP++V       N V    +A+G+  T  +S+DG V
Sbjct: 9   FGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDDGKV 68

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           +S G   +  LG   + +G     +  + P  ++S       ++QIS   S     H+ A
Sbjct: 69  WSCGSNYNGELGRGGVREG-----SYTIYPVHISS----TVSIIQISAGRS-----HSMA 114

Query: 393 LTESGKLYAFGAGDKGQLGI 412
           +++ G+L+A+G+   GQL +
Sbjct: 115 VSDDGRLFAWGSNSHGQLAM 134


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 162 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
             V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A  
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 336

Query: 360 LTPQLVTSLKQV 371
            TP +   L  V
Sbjct: 337 ATPAVTWRLLSV 348



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 66  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 182

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 240

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 293

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 294 STHTSAAKTQGGHVYMWGQCR 314



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 18  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 74

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 75  KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 132

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 133 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 188

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 189 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 249 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 297

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 298 SA---AKTQGGHVYMWG 311



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 260 NSYGQLG---TGNKSNQSYPTPVTVE 282


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 28/282 (9%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   + G     LI+  G+V+ +G  S G+  + V     V  P++VES
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMD--VGMPKVVES 358

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLEN 201
           L ++ +     G + T  L+  G +YT  WG++    + T+         P+ L G L+ 
Sbjct: 359 LDDVHIKSVVCGEYQTCALTHSGELYT--WGDNKNGANLTDEMRTRSQWLPYKLFGPLDG 416

Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           I + ++A G  +  +++L+ Q     +++ G G  G LGHGS     HP+ +   + L++
Sbjct: 417 ITISKVACGEWHTAIVSLSGQ-----LFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSV 471

Query: 260 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           + V  A G+WH A +              G++ TWG G  G LGH + E + VP  V  L
Sbjct: 472 KSV--ACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL 529

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            D   I V+ G   T  ++  G VY+ G      LG+    D
Sbjct: 530 VDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKD 571



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 12/343 (3%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  +T +G V+ +G  S G+LGH    +   P+ + SL  + I     G  +T  +
Sbjct: 318 GRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCAL 377

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + +G++Y +G +  G        T+    P +L   L  I + + A G + TA++S  G+
Sbjct: 378 THSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHTAIVSLSGQ 437

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA--------CQP 221
           ++T+  G    LGH +  +   P   + +L  + V  +A G  +  A+            
Sbjct: 438 LFTYGDGTFGVLGHGSLQSVSHPKE-VASLRGLSVKSVACGSWHTAAIVDIIADRFKFNA 496

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            G  +++ G G  G+LGH     +  P  +   +L++   + V+ G      +   G+V 
Sbjct: 497 VGGKLFTWGDGDKGRLGHSDMEKKLVPTCVA--KLVDYDFIRVSCGRMLTVALTNTGKVY 554

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
           T G   +G LG+   + +S+  V   L +     +++G Y   V++  G+VY++G G + 
Sbjct: 555 TMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVYTWGKGGNG 614

Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            LG   I D     +   L  + V S+   +     I L  SI
Sbjct: 615 QLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICLHKSI 657



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 39/288 (13%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           P+L+ES   + V   ++G    A++++ G V+ +  G+  +LGH     DV    ++ +L
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVN-MDVGMPKVVESL 359

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL----IEQFQ 255
           +++ +  +  G     AL    SG  +Y+ G    G     + TDE   R      + F 
Sbjct: 360 DDVHIKSVVCGEYQTCALT--HSG-ELYTWGDNKNG----ANLTDEMRTRSQWLPYKLFG 412

Query: 256 LLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L+ +    VA G WH A+V   G++ T+G G +G LGHG+ +  S PK V +L  +   
Sbjct: 413 PLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVK 472

Query: 315 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
            VA G + T  + +            G ++++G G+   LGH+ +           L P 
Sbjct: 473 SVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKK--------LVPT 524

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            V  L  V+   +++S    +     T ALT +GK+Y  G+   GQLG
Sbjct: 525 CVAKL--VDYDFIRVSCGRML-----TVALTNTGKVYTMGSSVHGQLG 565



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 28/188 (14%)

Query: 232 GLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G+  +LG+ S  + D   P+L+E   +L+++ +  + G  HAA++ + G V  WG G  G
Sbjct: 283 GMVQRLGNQSVMQVDALVPKLLESTAMLDVRSI--SLGRKHAALITKRGEVFCWGDGSRG 340

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LGH       +PKVV++L+DV    V  G+Y T  ++  G++Y++G             
Sbjct: 341 KLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCALTHSGELYTWG------------- 387

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERV------VQISLTNSIYWNAHTFALTESGKLYAFG 403
               N++   LT ++ T  + +  ++      + IS      W  HT  ++ SG+L+ +G
Sbjct: 388 ---DNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEW--HTAIVSLSGQLFTYG 442

Query: 404 AGDKGQLG 411
            G  G LG
Sbjct: 443 DGTFGVLG 450



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 22/253 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S+   G  H+  V+  G ++++G  + G LGHG+ +    P+ + SL+G+ +   A G+ 
Sbjct: 420 SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479

Query: 106 RTMLISD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            T  I D            G+++ +G    G   +     KLV  P  V  L +   ++ 
Sbjct: 480 HTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLV--PTCVAKLVDYDFIRV 537

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           + G   T  L+  G+VYT       +LG + +  D     + G L+   V +I++G  ++
Sbjct: 538 SCGRMLTVALTNTGKVYTMGSSVHGQLG-NPQAKDKSITIVEGKLKEEFVKEISSGSYHV 596

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAW 269
             L    SG  VY+ G G  G+LG G+  D   P  +E  +   ++ +     + AA   
Sbjct: 597 AVLT---SGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICL 653

Query: 270 HAAVVGQDGRVCT 282
           H ++   D   C+
Sbjct: 654 HKSISVTDQSSCS 666


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 16/374 (4%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG--HSIAVTSK 61
           +  + KP+ +A    LK    G W +   F L  E   +      + G      +  T  
Sbjct: 14  REKLTKPV-QATLSSLKMLDVGKWPI---FSLCSEEELQLIRQACVFGSAGNEVLYTTVN 69

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
             ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G
Sbjct: 70  DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWG 129

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  +
Sbjct: 130 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 188

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           +G  +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G
Sbjct: 189 VGSGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLG 245

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +  ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S
Sbjct: 246 NSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 303

Query: 301 VPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHA 357
            P  V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A
Sbjct: 304 YPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFA 363

Query: 358 NVLTPQLVTSLKQV 371
              TP +   L  V
Sbjct: 364 CFATPAVTWRLLSV 377



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 47  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 103

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 161

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 162 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 217

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 218 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 278 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 326

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 327 SA---AKTQGGHVYMWG 340



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 244 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 288

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311


>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
          Length = 484

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I +L    I+ AA G   T+ ++D 
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 183 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 240

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 241 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 300

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 301 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 357

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 358 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 410

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 411 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 459



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 169 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 227

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +ML+   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 228 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 286

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 287 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 344

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 345 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 395

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 396 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 452

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 453 MGYSHSLVIARD 464



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 101 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 158

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 159 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 214

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 215 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 274

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 275 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 325



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 297

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 349

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 350 QIYAGYTC-----SFAVSEVGGLFFWGA 372



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 336 RLVKLFDFPG-----RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 384

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 385 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 444

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 445 GIFSEQVAMGYSHSLVIARD 464



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 99  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 143

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 144 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 188

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 189 GENKMGQLGL---GNQTD 203


>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
 gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
          Length = 500

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I +L    I+ AA G   T+ ++D 
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 198

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 199 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 256

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 257 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 316

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 317 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 373

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 374 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 426

Query: 331 DVYSFG 336
              S+G
Sbjct: 427 STISWG 432



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 185 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 243

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +ML+   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 244 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 302

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 303 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 360

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 361 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 411

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 412 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 468

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 469 MGYSHSLVIARD 480



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 117 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 174

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 175 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 230

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 231 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 290

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 291 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 341



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 142 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 200

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 201 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 253

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 254 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 313

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 314 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 365

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 366 QIYAGYTC-----SFAVSEVGGLFFWGA 388



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  +Q  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 362 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 415

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 416 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 475

Query: 163 VLSRE 167
           V++R+
Sbjct: 476 VIARD 480



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 115 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 159

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 160 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 204

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 205 GENKMGQLGL---GNQTD 219


>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
          Length = 494

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 37/316 (11%)

Query: 46  SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           S  ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I +L    I+  A G
Sbjct: 123 SCVVSGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACG 182

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              T+ +++ G VY+FG++  G+   G Q T  V +P L+ S     +V+ A G  F+ V
Sbjct: 183 RNHTLALTEDGAVYSFGENKLGQLGQGNQ-TDAVLTPALI-SYNGQPLVKVACGAEFSMV 240

Query: 164 LSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLE 200
           +  +G +Y+F      +LGH+++            D E  P              +  + 
Sbjct: 241 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVP 300

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           N+ V  +A G  + L L  Q     V++ G G  G+LGH  + DE  PRL++ F      
Sbjct: 301 NVVVRDVACGANHTLVLDSQKR---VFTWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRG 357

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              + AG   +  V + G +  WG      + + + E    PK VQ L   K   +A G 
Sbjct: 358 ASQIYAGYQCSFAVSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGK 411

Query: 321 YTTFVVSEDGDVYSFG 336
            ++ +++ D    S+G
Sbjct: 412 -SSIIIAADESTISWG 426



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLFITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 168

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E   L     V VA G  H   + +DG V ++G  + G LG GN+    +   + + N  
Sbjct: 169 EA--LAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALISYNGQ 226

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 367
             + VA G   + VV   G++YSFGC E   LGHN+    IA  Q       L P+ V  
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAI 286

Query: 368 LKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
             + ++    + + N +  +      HT  L    +++ +G G  G+LG
Sbjct: 287 FIEKSKDGQIMPVPNVVVRDVACGANHTLVLDSQKRVFTWGFGGYGRLG 335



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 52/166 (31%)

Query: 283 WGWGRYGC-------------------------------------LGHGNEECESVPKVV 305
           WG  RYGC                                     LGHG+ +    PK++
Sbjct: 109 WGPHRYGCLNDVQVSCVVSGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLI 168

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
           +AL +   + VA G   T  ++EDG VYSFG  +   L       GQGN+   VLTP L+
Sbjct: 169 EALAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQL-------GQGNQTDAVLTPALI 221

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +   Q    +V+++          +  +   G LY+FG  + GQLG
Sbjct: 222 SYNGQP---LVKVACGAEF-----SMVVDCKGNLYSFGCPEYGQLG 259



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G  ++ +      E    P+
Sbjct: 346 RLVKLFDFPG-----RGASQIYAGYQCSFAVSEMGGLFFWGVTNTSR------ESTMYPK 394

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G +I   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 395 AVQDLCGWKIRSLACGKSSIIIAADESTISWGPSPTFGELGYGDTKPKSSTTAQEVKTLD 454

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            I++ Q  +G   + V++R+
Sbjct: 455 GIYIEQVVMGYSHSLVIARQ 474



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 21/178 (11%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 108
           G  H++ + S+  V+++G    G+LGH   ++E  PR ++     G    Q  AG   + 
Sbjct: 310 GANHTLVLDSQKRVFTWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRGASQIYAGYQCSF 369

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSR 166
            +S+ G ++           +GV  T   ++  P+ V+ L    +   A G     + + 
Sbjct: 370 AVSEMGGLFF----------WGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIIAAD 419

Query: 167 EGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           E    T SWG     G      T+P        + TL+ I + Q+  GY + L +A Q
Sbjct: 420 ES---TISWGPSPTFGELGYGDTKPKSSTTAQEVKTLDGIYIEQVVMGYSHSLVIARQ 474


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
             V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A  
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 360

Query: 360 LTPQLVTSLKQV 371
            TP +   L  V
Sbjct: 361 ATPAVTWRLLSV 372



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 89

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 90  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 206

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 264

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 265 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 317

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 318 STHTSAAKTQGGHVYMWGQCR 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 42  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 99  KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306


>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
           harrisii]
          Length = 552

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 10/291 (3%)

Query: 59  TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI-SDAGQVY 117
           T    V+  G+N SG LG G       PR +  L G +I   + G+G  ++I +D G+VY
Sbjct: 63  TENDEVFVLGTNCSGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVY 122

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G +++ +   G     LV +  +  +L N  V++ A G+  + VL+ +G V+ + + N
Sbjct: 123 TWGHNAYNQLGNGTTNHGLVPT-HISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNN 181

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
             ++G  +  N   P  + G L+N     IA G   + ++A   SG  VY  G    G+L
Sbjct: 182 SGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQ--MCSMAVVESG-EVYVWGYNGNGQL 238

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G GS  ++  P  I   Q + +  +V   G  H  V+  +G +  WG   YG LG GN+ 
Sbjct: 239 GLGSSGNQPTPCRIAALQGIRVHKIV--CGYAHTLVLTDEGHLYAWGANSYGQLGTGNKS 296

Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
            +S P  V    D V  I      +T+   ++ G +Y +G C G+S +L H
Sbjct: 297 NQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSVTLPH 347



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 14/242 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 108
           +GP H +  T +G VY++G N+  QLG+GTT     P  I +  G R +I+ A G+  ++
Sbjct: 108 SGP-HVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSL 166

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           +++  G+V+A+G ++ G+   G    + +   ++   L+N      A G   +  +   G
Sbjct: 167 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-KVTGCLQNKIATTIACGQMCSMAVVESG 225

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            VY + +  + +LG  +  N  +P P  +  L+ I V +I  GY + L L  +     +Y
Sbjct: 226 EVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGH---LY 280

Query: 228 SVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           + G    G+LG G+++++ +P    +E+ +++    +     A  +A   Q G +  WG 
Sbjct: 281 AWGANSYGQLGTGNKSNQSYPTPVSVEKDRVIE---IAACHSAHTSAAKTQSGHIYMWGQ 337

Query: 286 GR 287
            R
Sbjct: 338 CR 339



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 5/168 (2%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
           R+  +   G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ       A
Sbjct: 153 RKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIA 212

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   +M + ++G+VY +G +  G+   G  G +   +P  + +L+ I V +   G   T
Sbjct: 213 CGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVHKIVCGYAHT 270

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            VL+ EG +Y +   +  +LG   + N   P P+  ++E   V++IAA
Sbjct: 271 LVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPV--SVEKDRVIEIAA 316



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           VY+ G     +LG+G+      P  I    L N + + VA G+ H+ V+  DG V  WG+
Sbjct: 121 VYTWGHNAYNQLGNGTTNHGLVPTHIST-NLGNRKVIEVACGSHHSLVLTSDGEVFAWGY 179

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P KV   L +  A  +A G   +  V E G+VY +G   +  LG
Sbjct: 180 NNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLG 239

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +          N  TP  + +L+ +  RV +I     +   AHT  LT+ G LYA+GA
Sbjct: 240 LGS--------SGNQPTPCRIAALQGI--RVHKI-----VCGYAHTLVLTDEGHLYAWGA 284

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 285 NSYGQLG---TGNKSNQSYPTPVSVE 307



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 40  CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
           C + + +  IA G   S+AV   G VY +G N +GQLG G++  +  P  I +LQGIR+ 
Sbjct: 202 CLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVH 261

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           +   G   T++++D G +YA+G +S+G+   G +  +   +P  VE    +  + A    
Sbjct: 262 KIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSVEK-DRVIEIAACHSA 320

Query: 159 FFTAVLSREGRVYTFSWG 176
             +A  ++ G +Y   WG
Sbjct: 321 HTSAAKTQSGHIYM--WG 336


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 26/379 (6%)

Query: 4   KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
           +  + KP+ +A    LK    G W +         + C  E  Q I       +     +
Sbjct: 14  REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
             T    ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE 124

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           V+ +G +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
            N  ++G  +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNG 240

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG G+  ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQ 352
           +  +S P  V    D +  I      +T+   ++ G VY +G C G+S  L H       
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCT 358

Query: 353 GNRHANVLTPQLVTSLKQV 371
            +  A   TP +   L  V
Sbjct: 359 DDVFACFATPAVTWRLLSV 377



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 47  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 103

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 161

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 162 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 217

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 218 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 278 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 326

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 327 SA---AKTQGGHVYMWG 340



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 244 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 288

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 10/296 (3%)

Query: 55   SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
            S  VT  G +Y  G +  G+LG G       P  IRSL  ++I++ A G    + +++  
Sbjct: 1655 SAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEK 1714

Query: 115  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            +VYA+G   +G A  GV  T  V  PQ + SL    ++    G F +A LS+ G ++ + 
Sbjct: 1715 RVYAWGDGKWGNA--GVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWG 1772

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPV-VQIAAGYCYLLALACQPSGMAVYSVGCGL 233
              ++ +LG  T     +    +  L+ + + V + A +  +L     P+   +++ G   
Sbjct: 1773 KNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPN---LFTCGLNA 1829

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             G+LG G   D      ++   L + Q V  + GA H A V Q G + TWG GR G LG 
Sbjct: 1830 NGQLGLGDFVDRSTLTAVD--ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGL 1887

Query: 294  GNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
                 + +   VQ  A+ +   + V  G   T VVSE G++Y  G   +  LG N+
Sbjct: 1888 KAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNS 1943



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 24/305 (7%)

Query: 62  GVVYSFGSNSSGQLGHGT----TEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           G +Y++G    G+LGHG     +EE  + P+ I +L  + ++  A G   T  ++D G+V
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
           Y +GK + G+   G      +  PQLV+ L +  V Q ++G    A  +   +   F WG
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF--FVWG 632

Query: 177 NDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
           ++   +LG  H      +P+ +  +L    +  IA G  + L      +  +V S G G 
Sbjct: 633 SNTFGQLGIPHISSYMPDPYEIT-SLREANIRSIACGGWHTL---ISTNTGSVMSCGKGW 688

Query: 234 GGKLGHG--------SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
            G+LGHG        S+T     +++E F   +   V V+AG   +A +   GR+ TWG 
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFG--DSFIVKVSAGKESSAAITNKGRLFTWGK 746

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G    LGH + + E+ P+ V+    ++ + V+ GD     +   G  YS+G G +  LGH
Sbjct: 747 GDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGH 806

Query: 346 NAIAD 350
             + +
Sbjct: 807 GEMCE 811



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 133/301 (44%), Gaps = 34/301 (11%)

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG------ 168
            V+ +G    G+   G Q  ++   P +V + +N+ V   A+G   T  LS +G      
Sbjct: 91  HVFMWGDGENGK--LGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148

Query: 169 -RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPS 222
             VY      D  L   T  ++      L  L+ I      +V IAAGY + LAL    +
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLAL--NDT 206

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           G  ++S G G  GKLG GS  + + PR +   Q  N + V +A GA H A +   G V T
Sbjct: 207 G-KIFSWGSGSWGKLGIGSDANAESPRFVASLQ--NSKVVHIACGAHHTAAITTVGDVWT 263

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG G  G LGH + + E  P++  +L    A  +  GD  T V+   G +YS G      
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG     D         + P LVT     NE+V+ I           + ALT +GK++AF
Sbjct: 324 LGLGDATD--------RIIPTLVTGF--ANEKVIDIDAK-----GCRSIALTNTGKVFAF 368

Query: 403 G 403
           G
Sbjct: 369 G 369



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 179/444 (40%), Gaps = 84/444 (18%)

Query: 35   LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSL 92
            L G A C+      + G  HS A+   G +  +G N  GQLGHG T+    PR      L
Sbjct: 1320 LDGRAPCK-----ILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRL 1374

Query: 93   QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
            +G ++  A  GA  T+++  A +V+A G +  G+             P  +E L    + 
Sbjct: 1375 EG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNIC 1433

Query: 153  QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAA 209
            Q A G+  +  LS  G V+  SWG     +LGH T  + + P PLL   +  P V+ IA 
Sbjct: 1434 QVAAGDQHSLALSVFGEVW--SWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIAC 1491

Query: 210  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL------------- 256
            GY +  A++ +     V++ G G  G+LGH  +     P LI+ F               
Sbjct: 1492 GYTFSAAMSAKGE---VFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAG 1548

Query: 257  LNLQPVV---------------------VAAG-------------------AWHAAVVGQ 276
            +  +P +                     +AAG                   A+ A+   +
Sbjct: 1549 IVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKR 1608

Query: 277  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
             G V  WG    G LG    +    P ++Q+L     +H++     +  V++ G +Y  G
Sbjct: 1609 HGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 337  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
              E   LG   +A           TP  + SL  V  ++++++         H  ALTE 
Sbjct: 1669 GSEHGRLGLGHMAPAP--------TPVEIRSLNTV--KIMKVACG-----TYHCLALTEE 1713

Query: 397  GKLYAFGAGDKGQLGIELVNNQTE 420
             ++YA+G G  G  G+   N+  E
Sbjct: 1714 KRVYAWGDGKWGNAGVSNTNDVLE 1737



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 38/279 (13%)

Query: 171 YTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           + F WG+  + +LG+ +E     P+ ++    N+ V   A G  + L L+       V S
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPY-IVPAFRNVLVKVCALGKQHTLFLSADG---VVLS 146

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVV--------VAAGAWHAAVVGQD 277
            G  + G+LG G     +   + E   Q  L  LQ ++        +AAG +H+  +   
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G++ +WG G +G LG G++     P+ V +L + K +H+A G + T  ++  GDV+++G 
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGK 266

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
           G    LGH ++ +          +P+L  SL++   + ++         + HT  +  SG
Sbjct: 267 GLRGQLGHKSVKE--------EFSPRLNASLRKCGAQKIRCG-------DDHTLVILRSG 311

Query: 398 KLYAFGAGDKGQLGIELVNNQ------TERGNPERVDID 430
           +LY+ GA   GQLG+    ++      T   N + +DID
Sbjct: 312 QLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDID 350



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 174/399 (43%), Gaps = 59/399 (14%)

Query: 39  ACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
           A  R+  +Q I  G  H++ +   G +YS G+N+ GQLG G   +   P  +      ++
Sbjct: 287 ASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKV 346

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAI 156
           I   A   R++ +++ G+V+AFG ++            L   P+ V  L K+  ++  A 
Sbjct: 347 IDIDAKGCRSIALTNTGKVFAFGNET---------EPHLNRIPRFVAGLPKSDLIIAVAR 397

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLL 215
              F   +S  G++  F W            ++ E   +L +   I  VV++  G+ + +
Sbjct: 398 TAHFDFAISDTGQL--FRW--------RPFSSEEESSRMLESFHAIKGVVRMFCGHNH-M 446

Query: 216 ALACQPSGMAVYSVGC--GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW---H 270
           A+ C P       +GC   +  +    S + +     +E+F    + P +     +    
Sbjct: 447 AVICSP------EMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEF 500

Query: 271 AAVVGQ-------DGRVCTWGWGRYGCLGHG-----NEECESVPKVVQALNDVKAIHVAT 318
           A V  +       DG + T+G G +G LGHG     +EE    PK ++ L  +  + +A 
Sbjct: 501 ATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIAC 560

Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
           G  +T  +++ G VY++G      LG      G G   A ++ PQLV  L   +  V QI
Sbjct: 561 GKDSTAALTDTGKVYTWGKSAQGKLGL-----GSGKPLA-IVVPQLVQDLS--SHVVCQI 612

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
           SL  +     H    T+  K + +G+   GQLGI  +++
Sbjct: 613 SLGRN-----HAACSTDMHKFFVWGSNTFGQLGIPHISS 646



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 184/433 (42%), Gaps = 70/433 (16%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGI-----RI 97
           G  H++ +++ GVV S GSN  GQLG G           E  + + +  LQ I      I
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +  AAG   ++ ++D G+++++G  S+G  + G+       SP+ V SL+N  VV  A G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWG--KLGIGSDANAESPRFVASLQNSKVVHIACG 248

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              TA ++  G V+T+  G   +LGH +   +  P  L  +L      +I  G  + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPR-LNASLRKCGAQKIRCGDDHTLVI 307

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
               SG  +YS+G    G+LG G  TD   P L+  F   N + + + A    +  +   
Sbjct: 308 L--RSGQ-LYSMGANTHGQLGLGDATDRIIPTLVTGFA--NEKVIDIDAKGCRSIALTNT 362

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVY--- 333
           G+V  +G                +P+ V  L      I VA   +  F +S+ G ++   
Sbjct: 363 GKVFAFG-------NETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWR 415

Query: 334 SFGCGESASLGHNAIADGQG--------NRHANVLTPQL-----------VTSL------ 368
            F   E +S    +    +G        N  A + +P++            TS       
Sbjct: 416 PFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISR 475

Query: 369 ----KQVNERVVQISLTNSIYWNAH-TFALTES------GKLYAFGAGDKGQL--GIELV 415
               K  +E+++    TN+ Y +   T  + +S      G +Y +G G  G+L  G+E  
Sbjct: 476 ASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYT 535

Query: 416 NNQTERGNPERVD 428
            ++    +P+R++
Sbjct: 536 RSEESVKHPKRIE 548



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 174/424 (41%), Gaps = 38/424 (8%)

Query: 6    AIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGE--ACCRR-------ENSQAIAGPGHSI 56
            +I   + +A+  + K + GG +K     L  G    C  R       E  +  A   + +
Sbjct: 1114 SITGEIAKAKNDEKKARAGGPFKEYFNRLNIGRILQCLVRYSEKKHFEQIRDRANKRYEV 1173

Query: 57   AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTMLISDAGQ 115
             +  +  +Y++G   +G+LGHG       P+ I S     +I++ A G   ++  S  G 
Sbjct: 1174 DLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGG 1233

Query: 116  VYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
            VYA+G    G+      +         +PQ V +LK  F++  A G +    L+ E +V 
Sbjct: 1234 VYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVL 1293

Query: 172  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            ++  G   +LG     +   P  +       P   +  G+    + A   SG  +   G 
Sbjct: 1294 SWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWH---SAAILESG-KILLWGK 1349

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
             + G+LGHG       PR + Q+  L  +      GA H  VV    +V   G    G L
Sbjct: 1350 NVYGQLGHGDTKSCSAPR-VNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQL 1408

Query: 292  GHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            G  +     ++VP  ++ LN      VA GD  +  +S  G+V+S+G      LGH  I 
Sbjct: 1409 GLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETIT 1468

Query: 350  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF--ALTESGKLYAFGAGDK 407
            D         L P  +    ++   V  I+         +TF  A++  G+++ +G G+ 
Sbjct: 1469 DK--------LAPTPLLERHKIPPDVKSIAC-------GYTFSAAMSAKGEVFTWGNGES 1513

Query: 408  GQLG 411
            G+LG
Sbjct: 1514 GELG 1517



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 169/394 (42%), Gaps = 30/394 (7%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGA 104
            Q  AG  HS+A++  G V+S+G +  GQLGH T  ++  P P+     I   +   A G 
Sbjct: 1434 QVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGY 1493

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              +  +S  G+V+ +G    GE   G     L  +P L++      VVQ A G    A +
Sbjct: 1494 TFSAAMSAKGEVFTWGNGESGE--LGHAPKVLTYAPSLIKDFSE--VVQIACGFKHMAGI 1549

Query: 165  SREGRVYTFSWGNDARLGHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
              + R+ T      + +G +  T    +    + G+  +              A + Q  
Sbjct: 1550 VFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSA-SNQKR 1608

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
               V+  G    G+LG       + P L++   LL    V ++A +  +A V   G +  
Sbjct: 1609 HGCVFVWGEDTCGQLGIRGLQAARSPSLMQS--LLATSIVHISANSDMSAFVTDSGSLYV 1666

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
             G   +G LG G+      P  +++LN VK + VA G Y    ++E+  VY++G G+  +
Sbjct: 1667 SGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGN 1726

Query: 343  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
             G +   D        VL PQ ++SL          S+        H+ AL++ G L+ +
Sbjct: 1727 AGVSNTND--------VLEPQELSSL-------AACSIIGVHAGGFHSAALSQYGDLFMW 1771

Query: 403  GAGDKGQLGIELV----NNQTERGNPERVDIDLS 432
            G    GQLG+       ++ T+  N + V +D+S
Sbjct: 1772 GKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVS 1805



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 157/349 (44%), Gaps = 33/349 (9%)

Query: 62   GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
            G V+ +G ++ GQLG    +    P  ++SL    I+  +A +  +  ++D+G +Y  G 
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGG 1669

Query: 122  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
               G    G+       +P  + SL  + +++ A G +    L+ E RVY  +WG D + 
Sbjct: 1670 SEHG--RLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVY--AWG-DGKW 1724

Query: 182  GHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            G+   +  NDV     L +L    ++ + AG  +  AL+       ++  G    G+LG 
Sbjct: 1725 GNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGD---LFMWGKNSNGQLGL 1781

Query: 240  GSRT-DEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQ--DGRVCTWGWGRYGCLGHG 294
            G+ +  E  P  I      NL  VV  V+ GA H+AV+ Q     + T G    G LG G
Sbjct: 1782 GTTSAAEDSPTKIS-----NLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLG 1836

Query: 295  NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
            +    S    V AL+D + +  + G   T  VS+ GD+ ++G G +  LG  A       
Sbjct: 1837 DFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKA------G 1890

Query: 355  RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
               ++  P  + ++   N+ +V++     +     T  ++E G+LY  G
Sbjct: 1891 LSKDIENPVQLPAI--CNDPMVKVVCGQEV-----TIVVSEKGELYMAG 1932



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 27/303 (8%)

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G V+ +G+D+ G+   G++G +   SP L++SL    +V  +  +  +A ++  G +Y  
Sbjct: 1610 GCVFVWGEDTCGQ--LGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVS 1667

Query: 174  SWGNDARLGH-HTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
                  RLG  H  P    P P+ + +L  + ++++A G  + LAL  +     VY+ G 
Sbjct: 1668 GGSEHGRLGLGHMAP---APTPVEIRSLNTVKIMKVACGTYHCLALTEEKR---VYAWGD 1721

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
            G  G  G  +  D   P+ +      ++  + V AG +H+A + Q G +  WG    G L
Sbjct: 1722 GKWGNAGVSNTNDVLEPQELSSLAACSI--IGVHAGGFHSAALSQYGDLFMWGKNSNGQL 1779

Query: 292  GHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            G G     E  P  +  L+ V  + V+ G   + V+ +      F CG +A+ G   + D
Sbjct: 1780 GLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQVTSPNLFTCGLNAN-GQLGLGD 1837

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                     +    +T++  +++R +  +   +    AHT A+++ G L  +G G  GQL
Sbjct: 1838 --------FVDRSTLTAVDALDDRQIVSASCGA----AHTAAVSQYGDLITWGNGRNGQL 1885

Query: 411  GIE 413
            G++
Sbjct: 1886 GLK 1888



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRP--IRSLQGIRIIQAAA 102
           Q   G  H+   T     + +GSN+ GQLG  H ++   + P P  I SL+   I   A 
Sbjct: 611 QISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISS---YMPDPYEITSLREANIRSIAC 667

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG------VQGTKLVTSPQLVESLKNIFVVQAAI 156
           G   T++ ++ G V + GK   G+  +G           L    ++VE   + F+V+ + 
Sbjct: 668 GGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSA 727

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G   +A ++ +GR++T+  G++ +LGH +  N+  P   +     I VV ++ G  ++LA
Sbjct: 728 GKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPRE-VEFFAKIRVVDVSIGDSHMLA 786

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLI 251
           L    SG+  YS G G  G+LGHG   + E  PR I
Sbjct: 787 L--DYSGLP-YSWGNGSAGQLGHGEMCERETLPRPI 819



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 7/266 (2%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H++ +TS+  V S+G+   GQLG      +  P+ +++L G    +   G   +  I
Sbjct: 1279 GRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAI 1338

Query: 111  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGR 169
             ++G++  +GK+ +G+  +G   TK  ++P++ + L+    V  A +G   T V+    +
Sbjct: 1339 LESGKILLWGKNVYGQLGHG--DTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANK 1396

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+      D +LG        +  P+ +  L    + Q+AAG  + LAL+       V+S
Sbjct: 1397 VFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGE---VWS 1453

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
             G    G+LGH + TD+  P  + +   +      +A G   +A +   G V TWG G  
Sbjct: 1454 WGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGES 1513

Query: 289  GCLGHGNEECESVPKVVQALNDVKAI 314
            G LGH  +     P +++  ++V  I
Sbjct: 1514 GELGHAPKVLTYAPSLIKDFSEVVQI 1539



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G ++S+GS S G+LG G+      PR + SLQ  +++  A GA  T  
Sbjct: 195 AGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAA 254

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+  G V+ +GK   G  + G +  K   SP+L  SL+     +   G+  T V+ R G+
Sbjct: 255 ITTVGDVWTWGKGLRG--QLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQ 312

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           +Y+       +LG     + + P  + G   N  V+ I A  C  +AL
Sbjct: 313 LYSMGANTHGQLGLGDATDRIIPTLVTG-FANEKVIDIDAKGCRSIAL 359



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 34/211 (16%)

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           G  V+  G G  GKLG+ S   +  P ++  F+  N+   V A G  H   +  DG V +
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFR--NVLVKVCALGKQHTLFLSADGVVLS 146

Query: 283 WGWGRYGCLGHGN---------------EECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
            G   YG LG G+               +  + +  ++Q+LN++  + +A G Y +  ++
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI--VGIAAGYYHSLALN 204

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           + G ++S+G G    LG  +         AN  +P+ V SL+  N +VV I+        
Sbjct: 205 DTGKIFSWGSGSWGKLGIGS--------DANAESPRFVASLQ--NSKVVHIACGAH---- 250

Query: 388 AHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            HT A+T  G ++ +G G +GQLG + V  +
Sbjct: 251 -HTAAITTVGDVWTWGKGLRGQLGHKSVKEE 280



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 31/259 (11%)

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            L  E  +YT+  G + RLGH        P  +     N  +V++A G  + LA +     
Sbjct: 1175 LEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG-- 1232

Query: 224  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVV 274
              VY+ G G  G+LG     D      ++     N QPV+         +A G WH   +
Sbjct: 1233 -GVYAWGAGDRGQLGSLENFD-----CVKINYAFNPQPVLNLKRYFILSIACGRWHNMTL 1286

Query: 275  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
              + +V +WG G +G LG  +   +  P++V+AL+      +  G + +  + E G +  
Sbjct: 1287 TSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILL 1346

Query: 335  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
            +G      LGH         R         V    ++  +V    L  +     HT  + 
Sbjct: 1347 WGKNVYGQLGHGDTKSCSAPR---------VNQYLRLEGKVRTAGLGAN-----HTLVVM 1392

Query: 395  ESGKLYAFGAGDKGQLGIE 413
             + K++A G+   GQLG++
Sbjct: 1393 VANKVFAMGSNIDGQLGLD 1411



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 20/267 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTM 108
           G   + A+T  G VY++G ++ G+LG G+ +      P+ ++ L    + Q + G     
Sbjct: 561 GKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAA 620

Query: 109 LISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
             +D  + + +G ++FG  + G+   +  +  P  + SL+   +   A G + T + +  
Sbjct: 621 CSTDMHKFFVWGSNTFG--QLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT 678

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPSGMA- 225
           G V +   G   +LGH     D E    L  TL     +    G  +++ ++      A 
Sbjct: 679 GSVMSCGKGWHGQLGH----GDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAA 734

Query: 226 ------VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
                 +++ G G   +LGH S  +E +PR +E F    ++ V V+ G  H   +   G 
Sbjct: 735 ITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFA--KIRVVDVSIGDSHMLALDYSGL 792

Query: 280 VCTWGWGRYGCLGHGNE-ECESVPKVV 305
             +WG G  G LGHG   E E++P+ +
Sbjct: 793 PYSWGNGSAGQLGHGEMCERETLPRPI 819



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           Q   V  WG G  G LG+ +EE + VP +V A  +V     A G   T  +S DG V S 
Sbjct: 88  QGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSC 147

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA---HTFA 392
           G      LG   + D   +R   V  P    SL ++ + ++Q SL N +   A   H+ A
Sbjct: 148 GSNVYGQLG---MGDHMLSRSTPVSEPSKQKSLDKL-QAIIQ-SLNNIVGIAAGYYHSLA 202

Query: 393 LTESGKLYAFGAGDKGQLGI 412
           L ++GK++++G+G  G+LGI
Sbjct: 203 LNDTGKIFSWGSGSWGKLGI 222



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 111/266 (41%), Gaps = 27/266 (10%)

Query: 165 SREGRVYTFSWGNDA--RLGH---HTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 218
           SREG  Y +++G     RLGH   +T   +   HP  + TL  + VV IA G     AL 
Sbjct: 510 SREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALT 569

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVV---AAGAWHAAVV 274
                  VY+ G    GKLG GS      P  I   QL+ +L   VV   + G  HAA  
Sbjct: 570 ---DTGKVYTWGKSAQGKLGLGS----GKPLAIVVPQLVQDLSSHVVCQISLGRNHAACS 622

Query: 275 GQDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
               +   WG   +G LG  H +      P  + +L +     +A G + T + +  G V
Sbjct: 623 TDMHKFFVWGSNTFGQLGIPHISSYMPD-PYEITSLREANIRSIACGGWHTLISTNTGSV 681

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
            S G G    LGH       G+  +     + +   K++ E      +         + A
Sbjct: 682 MSCGKGWHGQLGH-------GDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAA 734

Query: 393 LTESGKLYAFGAGDKGQLGIELVNNQ 418
           +T  G+L+ +G GD+ QLG E   N+
Sbjct: 735 ITNKGRLFTWGKGDEYQLGHESSKNE 760



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 10/230 (4%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTM 108
            AG  HS A++  G ++ +G NS+GQLG GTT   E  P  I +L G+ ++  + GA  + 
Sbjct: 1754 AGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSA 1812

Query: 109  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++        F        + G+      ++   V++L +  +V A+ G   TA +S+ G
Sbjct: 1813 VLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYG 1872

Query: 169  RVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS-GMAV 226
             + T+  G + +LG       D+E    L  + N P+V++  G    + ++ +    MA 
Sbjct: 1873 DLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAG 1932

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVG 275
            Y    GLG   G+ SR  E      E   L  +QP  +A G+ H  A+VG
Sbjct: 1933 YESTIGLG---GNSSRRREFDVSFREVEGL--IQPTQIAVGSVHVLALVG 1977



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 12/165 (7%)

Query: 42  RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--------EWRPRPIRSL 92
           R  N ++IA G  H++  T+ G V S G    GQLGHG  E          +  + +   
Sbjct: 658 REANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGF 717

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
               I++ +AG   +  I++ G+++ +GK    E + G + +K    P+ VE    I VV
Sbjct: 718 GDSFIVKVSAGKESSAAITNKGRLFTWGKGD--EYQLGHESSKNEAYPREVEFFAKIRVV 775

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL 196
             +IG+     L   G  Y++  G+  +LGH      +  P P++
Sbjct: 776 DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPIM 820


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 23/329 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  HS+ +T+ G  +SFGSN  GQLGHG T+    PR +++L+  R I  A G   T++ 
Sbjct: 50  GDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVA 109

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +D  +VYAFG +S  E + GV+ +      PQLV +L  + V     G   +  LS +G 
Sbjct: 110 TDDKKVYAFGINS--EHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGI 167

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           VY +      +LG   +     P  L    + I +   A    Y+       +   +Y+ 
Sbjct: 168 VYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAYV------NTDGVLYTF 221

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGR 287
           G    GKLG    T+    +  +  ++ ++Q +V  VA G  H   +  DGR  ++G G 
Sbjct: 222 GETEHGKLG----TNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGS 277

Query: 288 YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            G LG G     +  P ++Q    VK   V+ G   T  +SE   +Y+  CGE     H 
Sbjct: 278 QGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYT--CGEGR---HG 332

Query: 347 AIADGQGNRHANVLTPQLVT--SLKQVNE 373
            +A   G   +N  +P LV   SL QV +
Sbjct: 333 KLALEDGEMGSNKFSPMLVDILSLFQVQQ 361



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 43/343 (12%)

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           +I  A G   ++ I+ +G+ ++FG + +G+  +G   TK + +P+ V++LK+   +  A 
Sbjct: 44  VISVACGDQHSVFITASGRTFSFGSNDYGQLGHG--HTKALVNPRCVKALKDKRAILVAC 101

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAG 210
           G   T V + + +VY F   ++ +LG      +H +P       L+ TL  + V  + AG
Sbjct: 102 GRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQ------LVATLNGVQVKALTAG 155

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + LAL+ +     VY  G    G+LG G +   K P  ++       + + ++AGA+H
Sbjct: 156 ADHSLALSAKG---IVYLWGSSEHGQLGLGRKKQRKLPVQLKT----EGKAIAISAGAYH 208

Query: 271 AAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKV--VQALNDVKAIHVATGDYTTFVV 326
           +A V  DG + T+G   +G LG     ++C    KV  +Q L       VA G   T  +
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL----VTSVACGGSHTVAL 264

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           + DG  YSFG G    L       G G R  +   P L+     V  ++ ++S   S   
Sbjct: 265 TCDGRAYSFGDGSQGQL-------GLGQRVTHAGRPHLIQMPTGV--KMARVSAGQS--- 312

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
             HT  L+E  ++Y  G G  G+L +E     + + +P  VDI
Sbjct: 313 --HTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDI 353



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 140/321 (43%), Gaps = 38/321 (11%)

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I + G V+ FGK  F +    + GT  V         KN  V+  A G+  +  ++  GR
Sbjct: 15  IPELGAVFTFGKSKFSD---NLPGTFWV---------KNDAVISVACGDQHSVFITASGR 62

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            ++F   +  +LGH      V P   +  L++   + +A G  + L          VY+ 
Sbjct: 63  TFSFGSNDYGQLGHGHTKALVNPR-CVKALKDKRAILVACGRSHTLVAT---DDKKVYAF 118

Query: 230 GCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
           G     +LG   S      P+L+    L  +Q   + AGA H+  +   G V  WG   +
Sbjct: 119 GINSEHQLGVKSSAAYHADPQLVAT--LNGVQVKALTAGADHSLALSAKGIVYLWGSSEH 176

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G ++   +P  VQ   + KAI ++ G Y +  V+ DG +Y+FG  E   LG N  
Sbjct: 177 GQLGLGRKKQRKLP--VQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTN-- 232

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
                      L P+      +V +  +Q  +T+     +HT ALT  G+ Y+FG G +G
Sbjct: 233 -----------LAPKKCRKPSKVPD--IQGLVTSVACGGSHTVALTCDGRAYSFGDGSQG 279

Query: 409 QLGIELVNNQTERGNPERVDI 429
           QLG  L    T  G P  + +
Sbjct: 280 QLG--LGQRVTHAGRPHLIQM 298



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 22/233 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+++KG+VY +GS+  GQLG G   ++ R  P++     + I  +AGA  +  
Sbjct: 154 AGADHSLALSAKGIVYLWGSSEHGQLGLG--RKKQRKLPVQLKTEGKAIAISAGAYHSAY 211

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLV----TSPQLVESLKNIFVVQAAIGNFFTAVLS 165
           ++  G +Y     +FGE E+G  GT L       P  V  ++ + V   A G   T  L+
Sbjct: 212 VNTDGVLY-----TFGETEHGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALT 265

Query: 166 REGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
            +GR Y+F  G+  +LG          PH L+     + + +++AG  +   L+    G 
Sbjct: 266 CDGRAYSFGDGSQGQLGLGQRVTHAGRPH-LIQMPTGVKMARVSAGQSHTAFLS---EGR 321

Query: 225 AVYSVGCGLGGKLG--HGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            +Y+ G G  GKL    G     K  P L++   L  +Q   V+ G  H  V+
Sbjct: 322 QMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQ--VSCGGCHTLVL 372


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 20/320 (6%)

Query: 42  RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
           ++E+ Q ++ G  HS+ +   G + S G N  GQLG        R   I SL+   I+  
Sbjct: 32  KKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNS--RIEQISSLEAQTIVDV 89

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           + G   ++ + D G +Y++G  S G+   G   +K  T P+ +  L N  ++Q + GNF 
Sbjct: 90  SCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFT-PKRITGLLNRKIIQISCGNFH 148

Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           +  L+ +GRV  FSWG +   +LG  ++  +     L+ +L+ IP+VQ+ AG     AL+
Sbjct: 149 SVALAEDGRV--FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALS 206

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              SG  V++ G    G+LG  +   +   +      L +L    ++ G  H AV+ +DG
Sbjct: 207 M--SG-TVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDG 263

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            V T+G   YG LG  +    SVP+ ++  +  +   VA G Y T        +Y F C 
Sbjct: 264 IVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSR-QVSQVACGRYHTL-------LYVFTCN 315

Query: 339 ESASLGHNAIADGQGNRHAN 358
              S G  +    QGN  ++
Sbjct: 316 RIVSFGKGS-QRQQGNDESS 334



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 29/198 (14%)

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           G+ G+ SR        IEQ   L  Q +V V+ G  H+  +  +G + +WG G  G LG 
Sbjct: 67  GRKGNNSR--------IEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGT 118

Query: 294 GNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
           G    ++  PK +  L + K I ++ G++ +  ++EDG V+S+G  +   LG        
Sbjct: 119 GKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLG-------L 171

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           G++  N  TPQLV SLK +   +VQ++   S      TFAL+ SG ++A+G  + GQLG 
Sbjct: 172 GSQIINQATPQLVKSLKGI--PLVQVTAGGS-----QTFALSMSGTVFAWGRNNAGQLGF 224

Query: 413 ELVNNQTERG--NPERVD 428
           +   N  ++G   P  VD
Sbjct: 225 K---NDAKKGTFKPYAVD 239



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 23/298 (7%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +Y +G + FG+     +  ++V   +     K   V + +IG   +  L ++G + +   
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
               +LG     + +E    + +LE   +V ++ G  + +A+ C      +YS G G  G
Sbjct: 61  NPYGQLGRKGNNSRIEQ---ISSLEAQTIVDVSCGTNHSVAM-CDEGN--IYSWGDGSEG 114

Query: 236 KLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           +LG G  + +   P+ I    LLN + + ++ G +H+  + +DGRV +WG  + G LG G
Sbjct: 115 QLGTGKFSSKNFTPKRITG--LLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG 172

Query: 295 NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
           ++   ++ P++V++L  +  + V  G   TF +S  G V+++G   +  LG       + 
Sbjct: 173 SQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGF------KN 226

Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +       P  V SL+ +   V  IS         HT  L + G +Y FG    GQLG
Sbjct: 227 DAKKGTFKPYAVDSLRDLG--VAYISCGEE-----HTAVLNKDGIVYTFGDDTYGQLG 277


>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
          Length = 439

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)

Query: 49  IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    I+ AA G   
Sbjct: 70  VSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNH 129

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  
Sbjct: 130 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDC 187

Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
           +G +Y+F      +LGH+++            D E  P              +  + N+ 
Sbjct: 188 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 247

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         
Sbjct: 248 VRDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 304

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           + AG   +  V + G +  WG        + + E    PK VQ L   K   +A G  ++
Sbjct: 305 IYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 357

Query: 324 FVVSEDGDVYSFG 336
            +V+ D    S+G
Sbjct: 358 IIVAADESTISWG 370



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 123 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAIPSPAQIMYNGQPITKMACGAEF 181

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 182 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 240

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 241 LPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 298

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 299 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 349

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 350 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 406

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 407 MGYSHSLVIARD 418



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 55  PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 112

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E   +L+ + +V AA G  H   + + G V  +G  + G LG GN+  +++P   Q + +
Sbjct: 113 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPSPAQIMYN 168

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 169 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 228

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 229 AIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 279



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 67/330 (20%)

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 34  GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 79

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             +++ EG+++++      +LGH  +   VE   L+  L    +V  A G  + LAL   
Sbjct: 80  --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
            S   V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 137 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 189

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 190 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 249

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 250 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 301

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             QI    +      +FA++E G L+ +GA
Sbjct: 302 AAQIYAGYTC-----SFAVSEVGGLFFWGA 326



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 53  WGPHRYGCL--------SGVQVRTVVSGPCAAH-------SLLITTEGKLWSWGRNEKGQ 97

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L +  E +V  +   +     HT ALTE+G ++AF
Sbjct: 98  LGH-----GDTKR---VEAPKLIEVLSK--EVIVSAACGRN-----HTLALTETGSVFAF 142

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 143 GENKMGQLGL---GNQTD 157



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  +Q  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G +I   A 
Sbjct: 300 RGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWKIRSLAC 353

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  I+  Q A+G   + 
Sbjct: 354 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 413

Query: 163 VLSRE 167
           V++R+
Sbjct: 414 VIARD 418


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 159/348 (45%), Gaps = 26/348 (7%)

Query: 9   KPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSIAVTSK 61
           KP+ +A    LK+   G W +         + C  E  Q I       +     +  T  
Sbjct: 14  KPV-QATLSSLKKLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVLYTTVN 64

Query: 62  GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
             ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G
Sbjct: 65  DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWG 124

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
            +++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  +
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           +G  +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLG 240

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           +  ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S
Sbjct: 241 NSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298

Query: 301 VPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
            P  V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 299 YPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 42  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 99  KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306


>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
          Length = 498

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I +L    I+ AA G   T+ ++D 
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 196

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 197 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 254

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 255 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 314

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 315 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 371

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 372 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 424

Query: 331 DVYSFG 336
              S+G
Sbjct: 425 STISWG 430



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 183 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 241

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +ML+   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 242 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 300

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 301 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 358

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 359 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 409

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 410 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 466

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 467 MGYSHSLVIARD 478



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 115 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 172

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 173 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 228

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 229 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 288

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 289 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 339



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 140 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 198

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 199 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 251

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 252 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 311

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 312 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 363

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 364 QIYAGYTC-----SFAVSEVGGLFFWGA 386



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  +Q  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 360 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 413

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 414 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 473

Query: 163 VLSRE 167
           V++R+
Sbjct: 474 VIARD 478



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 113 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 157

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 158 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 202

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 203 GENKMGQLGL---GNQTD 217


>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 747

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 175/374 (46%), Gaps = 43/374 (11%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           +AG  HS+ + + G V+S+G N  GQLG GT +   R  P+R +   +     A+G   +
Sbjct: 354 VAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQP--RMSPVRVATTTLGNPGVASGQLHS 411

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           +    AG+V+++G +  G+   G+   KL  +P L      + VV    GN  T VL  +
Sbjct: 412 VYRDSAGRVWSWGDNEDGQLGNGIGADKL--TPALTGLTGAVSVVA---GNRHTVVL--K 464

Query: 168 GRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           G    ++WG ++R  +G  T  N  +P  +LG L  I    I+AG  + LAL    +   
Sbjct: 465 GDTTVWAWGVNSRGEVGDGTNANTSQPVRVLG-LSGI--TAISAGAYHSLALRTDGT--- 518

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           V++ G    G+LG+G   D+  P      Q+  L  V  +AAG  H+  +  DG V  WG
Sbjct: 519 VWAWGFNRYGQLGNGGTVDQNQP-----VQVAGLSGVTAIAAGHSHSLALCGDGTVWAWG 573

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           +   G +G G      +P     L+ V AI    G Y +  +  DG V+S+G   S  LG
Sbjct: 574 YNFDGQIGSGTNNWHILPVQAVGLSSVTAI--TAGGYHSLALRSDGTVWSWGYNGSGQLG 631

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
           + A+A        ++  P  V++L  V      +S+    Y   H+ AL   G + A+G 
Sbjct: 632 NGALA--------SLNAPGPVSNLTGV------VSIAAGDY---HSLALRSDGTVRAWGF 674

Query: 405 GDKGQLGIELVNNQ 418
              GQ+G   + N+
Sbjct: 675 NFDGQIGDGSLTNR 688



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 173/393 (44%), Gaps = 43/393 (10%)

Query: 39  ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-I 97
           A     N    +G  HS+   S G V+S+G N  GQLG+G   ++  P    +L G+   
Sbjct: 395 ATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNGIGADKLTP----ALTGLTGA 450

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           +   AG   T+++     V+A+G +S GE   G       + P  V  L  I  + A  G
Sbjct: 451 VSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANT--SQPVRVLGLSGITAISA--G 506

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            + +  L  +G V+ + +    +LG+    +  +P  + G      V  IAAG+ + LAL
Sbjct: 507 AYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVAGLSG---VTAIAAGHSHSLAL 563

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
               +   V++ G    G++G G  T+  H   I   Q + L  V  + AG +H+  +  
Sbjct: 564 CGDGT---VWAWGYNFDGQIGSG--TNNWH---ILPVQAVGLSSVTAITAGGYHSLALRS 615

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           DG V +WG+   G LG+G     + P  V  L  V  + +A GDY +  +  DG V ++G
Sbjct: 616 DGTVWSWGYNGSGQLGNGALASLNAPGPVSNLTGV--VSIAAGDYHSLALRSDGTVRAWG 673

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                 +G  ++     NRH     P +V  +  V   +           + H+ A+   
Sbjct: 674 FNFDGQIGDGSLT----NRH----VPVMVAGMSGVVSVIAG---------DHHSMAMRSD 716

Query: 397 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
           G  +A+GA  +GQLG    N+      P RV++
Sbjct: 717 GTTWAWGANTEGQLGDGTRNDSII---PVRVEL 746



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 171/388 (44%), Gaps = 57/388 (14%)

Query: 32  RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
           R  LAG A   R +     G  HS+ V S G V+++G N  GQLG+G       P P++ 
Sbjct: 43  RAALAGRASVARLS----LGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNS--PTPVKV 96

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
                 +  A+G   ++ +   G V+A+G +  G  + G   T +   P  V+ L  +  
Sbjct: 97  KNLTDAVAVASGDSHSLALRSDGTVWAWGDNYSG--QLGTGSTAVSAEPVQVQGLSGVLS 154

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQI 207
           V  A G   +A L  +G V+  +WG++   +LG  T  +   P   P LG      V+ +
Sbjct: 155 V--ASGFAHSAALRSDGTVW--AWGDNRYRQLGPLTAGSSSVPVQVPGLG-----GVIAV 205

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
           AAG    LAL    +   V++ G    G+LG G+ T   +P      Q+L L  VV ++A
Sbjct: 206 AAGGNTTLALRADGT---VWAWGDNRSGQLGDGTVTTRGNP-----LQVLGLTGVVTLSA 257

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           GA H   +  +G   TWG    G LG G     SVP  V  L DV A     G+Y +  V
Sbjct: 258 GASHCVALRSNGTAWTWGLNTMGQLGDGTTTQRSVPAQV-GLTDVMA--AVAGNYHSLAV 314

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
             DG V+++G      LG+       GN  +++L               +Q  L+  I  
Sbjct: 315 RSDGAVWAWGDNRYRQLGN-------GNMTSSLLP--------------IQAGLSGGITL 353

Query: 387 NA---HTFALTESGKLYAFGAGDKGQLG 411
            A   H+  L   G ++++G    GQLG
Sbjct: 354 VAGFKHSLTLRADGTVWSWGDNVFGQLG 381



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 38/365 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
           A+AG  HS+AV S G V+++G N   QLG+G       P       GI ++   AG   +
Sbjct: 304 AVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGLSGGITLV---AGFKHS 360

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           + +   G V+++G + FG+   G    ++        +L N  V   A G   +      
Sbjct: 361 LTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNPGV---ASGQLHSVYRDSA 417

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           GRV+++    D +LG+    + + P  L G    + VV   AG  + + L    +   V+
Sbjct: 418 GRVWSWGDNEDGQLGNGIGADKLTP-ALTGLTGAVSVV---AGNRHTVVLKGDTT---VW 470

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G++G G+  +   P      ++L L  +  ++AGA+H+  +  DG V  WG+ 
Sbjct: 471 AWGVNSRGEVGDGTNANTSQP-----VRVLGLSGITAISAGAYHSLALRTDGTVWAWGFN 525

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           RYG LG+G    ++ P  V  L+ V AI  A G   +  +  DG V+++G      +G  
Sbjct: 526 RYGQLGNGGTVDQNQPVQVAGLSGVTAI--AAGHSHSLALCGDGTVWAWGYNFDGQIG-- 581

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
               G  N H   + P     L  V       ++T   Y   H+ AL   G ++++G   
Sbjct: 582 ---SGTNNWH---ILPVQAVGLSSVT------AITAGGY---HSLALRSDGTVWSWGYNG 626

Query: 407 KGQLG 411
            GQLG
Sbjct: 627 SGQLG 631



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 166/364 (45%), Gaps = 40/364 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  HS+A+ S G V+++G N SGQLG G+T     P  ++ L G  ++  A+G   +  
Sbjct: 107 SGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGLSG--VLSVASGFAHSAA 164

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G + + +      G+  V  P  V  L  +  V A  G   T  L  +G 
Sbjct: 165 LRSDGTVWAWGDNRYRQLGPLTAGSSSV--PVQVPGLGGVIAVAA--GGNTTLALRADGT 220

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T      P  +LG      VV ++AG  + +AL  + +G A +
Sbjct: 221 VW--AWGDNRSGQLGDGTVTTRGNPLQVLGL---TGVVTLSAGASHCVAL--RSNGTA-W 272

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
           + G    G+LG G+ T    P    Q  L ++   V  AG +H+  V  DG V  WG  R
Sbjct: 273 TWGLNTMGQLGDGTTTQRSVP---AQVGLTDVMAAV--AGNYHSLAVRSDGAVWAWGDNR 327

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           Y  LG+GN     +P  +QA      I +  G   +  +  DG V+S+G      LG   
Sbjct: 328 YRQLGNGNMTSSLLP--IQA-GLSGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLG--- 381

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG    +   ++P  V +    N  V    L        H+     +G+++++G  + 
Sbjct: 382 --DGT---YQPRMSPVRVATTTLGNPGVASGQL--------HSVYRDSAGRVWSWGDNED 428

Query: 408 GQLG 411
           GQLG
Sbjct: 429 GQLG 432



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+   G V+++G N  GQ+G GT    W   P++++    +    AG   ++ 
Sbjct: 555 AGHSHSLALCGDGTVWAWGYNFDGQIGSGT--NNWHILPVQAVGLSSVTAITAGGYHSLA 612

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+++G +  G+   G   +  + +P  V +L    VV  A G++ +  L  +G 
Sbjct: 613 LRSDGTVWSWGYNGSGQLGNGALAS--LNAPGPVSNLTG--VVSIAAGDYHSLALRSDGT 668

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  + +  D ++G  +  N   P  + G      VV + AG  + +A+    +    ++ 
Sbjct: 669 VRAWGFNFDGQIGDGSLTNRHVPVMVAGMSG---VVSVIAGDHHSMAMRSDGT---TWAW 722

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQF 254
           G    G+LG G+R D   P  +E F
Sbjct: 723 GANTEGQLGDGTRNDSIIPVRVELF 747


>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
          Length = 484

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I +L    I+ AA G   T+ ++D 
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 183 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 240

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+  + +A G
Sbjct: 241 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACG 300

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 301 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 357

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 358 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 410

Query: 331 DVYSFG 336
              S+G
Sbjct: 411 STISWG 416



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 169 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 227

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +ML+   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 228 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 286

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+  +  A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 287 LPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 344

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++   L   +
Sbjct: 345 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQ--DLCGWR 393

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
              +A G   + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 394 IRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 452

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 453 MGYSHSLVIARD 464



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 28/297 (9%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP--------- 187
           V+   + + LK+ F+++  I  F       +G++  F   N   +G    P         
Sbjct: 35  VSKGTIFQRLKSAFLLKTRILLFKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNL 94

Query: 188 --NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
             N   PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     
Sbjct: 95  GQNLWGPH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRV 152

Query: 246 KHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
           + PRLIE    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP  
Sbjct: 153 EAPRLIEA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSP 208

Query: 305 VQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANV 359
            Q + + + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   
Sbjct: 209 AQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCE 268

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
           L P+ V    +  +    + + N ++ +      HT  L    +++++G G  G+LG
Sbjct: 269 LVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLG 325



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V  +HV
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHV 297

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--------MVPRLVKLFDFPGRGAT 349

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 350 QIYAGYTC-----SFAVSEVGGLFFWGA 372



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  +Q  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 346 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 399

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 400 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 459

Query: 163 VLSRE 167
           V++R+
Sbjct: 460 VIARD 464



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 99  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 143

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 144 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 188

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 189 GENKMGQLGL---GNQTD 203


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 48/380 (12%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VY FG+       +G   +   P+ + S   + + + + G     L++  G+V+ +G+ S
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGS 335

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--- 180
            G   + V     + +P++VESL  + V   + G + T  L+  G +YT  WG++     
Sbjct: 336 GGXLGHKVNMD--MGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYT--WGDNGSGID 391

Query: 181 -LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
            +G   + +   P  L G L    +  +A G  ++  ++   +   +++ G G  G LGH
Sbjct: 392 LVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS---TSGQLFTYGDGTFGVLGH 448

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRY 288
           G       P+ +E    L ++    A G WH A +            + G++ TWG G  
Sbjct: 449 GKLESISQPKEVESLSGLWVK--AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDK 506

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LGHG++E + +P  V  L D   + V+ G   T  ++  G VY+ G      LG+   
Sbjct: 507 GRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQA 566

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D              +   K  +E V +IS       + H  ALT  G LY +G G  G
Sbjct: 567 KDKS----------IAIVGGKLKDEFVKEISSG-----SYHVAALTSKGSLYTWGMGANG 611

Query: 409 QLGIELVNNQTERGNPERVD 428
           QLG+    +  +R +P  V+
Sbjct: 612 QLGL---GDTEDRNSPAVVE 628



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 30/287 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSG--QLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G   + A+T  G +Y++G N SG   +G      +W P  +   L G  I   A G    
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            ++S +GQ++ +G  +FG   +G    + ++ P+ VESL  ++V  AA G + TA +   
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLGHG--KLESISQPKEVESLSGLWVKAAACGPWHTAAIVEV 484

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                   ++ G+++T+  G+  RLGH  +   + P   +  L +   VQ++ G    + 
Sbjct: 485 RADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP-TCVAQLVDHDFVQVSCGRMLTVG 543

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQFQLLNLQPVVVAAGAWHAA 272
           L C  +   VY++G  + G+LG+    D+       +L ++F         +++G++H A
Sbjct: 544 LTCLGT---VYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFV------KEISSGSYHVA 594

Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            +   G + TWG G  G LG G+ E  + P VV+AL D +   +A G
Sbjct: 595 ALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACG 641



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 20/331 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  VT  G V+ +G  S G LGH    +   P+ + SL G+ +   + G  +T  +
Sbjct: 315 GGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCAL 374

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           + +G++Y +G +  G    G +  +    P +L   L    +   A G +  A++S  G+
Sbjct: 375 THSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQ 434

Query: 170 VYTFSWGNDARLGHH-----TEPNDVEPHPLL-------GTLENIPVVQIAAGYCYLLAL 217
           ++T+  G    LGH      ++P +VE    L       G      +V++ A       L
Sbjct: 435 LFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRAD-----RL 489

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                G  +++ G G  G+LGHG +  +  P  + Q  L++   V V+ G      +   
Sbjct: 490 KFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQ--LVDHDFVQVSCGRMLTVGLTCL 547

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
           G V T G   +G LG+   + +S+  V   L D     +++G Y    ++  G +Y++G 
Sbjct: 548 GTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWGM 607

Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSL 368
           G +  LG     D         L  + V S+
Sbjct: 608 GANGQLGLGDTEDRNSPAVVEALRDRQVESI 638



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           +G  H  A+TSKG +Y++G  ++GQLG G TE+   P  + +L+  ++   A G+G T  
Sbjct: 588 SGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAA 647

Query: 110 I 110
           I
Sbjct: 648 I 648



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G   ++ +T  G VY+ GS   GQLG+   +++        L+   + + ++G+  
Sbjct: 533 QVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYH 592

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
              ++  G +Y +G  + G  + G+  T+   SP +VE+L++  V   A G+ FTA +
Sbjct: 593 VAALTSKGSLYTWGMGANG--QLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAI 648


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  103 bits (258), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 100/373 (26%), Positives = 170/373 (45%), Gaps = 38/373 (10%)

Query: 53  GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
           G+S+A+ S   V+++G   SG LG+GT E+     P+R L G+   Q +AG G ++ +  
Sbjct: 646 GYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDLTGVE--QISAGEGHSLALRS 703

Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
            G  +A+G +++G    G   T   + P  V  L  +  V+A  G   +  L  +G V+ 
Sbjct: 704 DGTAWAWGDNAYGM--LGNNSTVTSSIPVQVSGLTGVSSVKA--GRLHSMALKSDGTVWA 759

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           + +  + +LG  +    + P  + G LE+  V+ I+AG  + + +    S   V++ G  
Sbjct: 760 WGYNTEGQLGDGSTTQRLVPVQVSG-LED--VIAISAGDYHSMVIK---SDGTVWAWGRN 813

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
             G+LG+ S T    P      Q+  L  V +++AG   +A V  DG    WG   YG L
Sbjct: 814 SNGQLGNNSTTGSLVP-----VQVPGLTGVALISAGTNTSAAVKSDGTALAWGSNTYGQL 868

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
             G+     +P  V     V A+ +   +  + ++  DG V+  G  +   +G+N+I D 
Sbjct: 869 CDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDS 928

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +         P     L  V      +S++  +Y   H+ AL   G ++ +G    GQLG
Sbjct: 929 K--------VPVQTLGLAGV------VSISAGLY---HSMALKSDGTIWGWGYNGYGQLG 971

Query: 412 IELVNNQTERGNP 424
               N+ T R  P
Sbjct: 972 D---NSTTSRLAP 981



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 55/386 (14%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G  + +G NS GQLG+ +T +   P  +  L G+  I  +AG   +M 
Sbjct: 477 AGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGLSGVSAI--SAGNYHSMA 534

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G++S G  + G   T +   P  ++ L     V A  G + +  L  +G 
Sbjct: 535 LKSDGTVWAWGRNSSG--QLGNNSTTVSLVP--IQVLTGTTSVSA--GTYHSMALKSDGA 588

Query: 170 VYTFSWGND--ARLGHHTEPNDVEP-------------HPLLGTLENIPVVQIAAGYCYL 214
           V+   WGN+   ++  +T  + + P                + + + I  +  ++G  Y 
Sbjct: 589 VW--GWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYG 646

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAV 273
            +LA + S   V++ G G  G LG+G+       +++  + + +L  V  ++AG  H+  
Sbjct: 647 YSLALK-SDKTVWAWGYGGSGVLGNGT-----GEQMLVGYPVRDLTGVEQISAGEGHSLA 700

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           +  DG    WG   YG LG+ +    S+P  V  L  V +  V  G   +  +  DG V+
Sbjct: 701 LRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSS--VKAGRLHSMALKSDGTVW 758

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           ++G      LG     DG   +    L P  V+ L+ V      I+++   Y   H+  +
Sbjct: 759 AWGYNTEGQLG-----DGSTTQR---LVPVQVSGLEDV------IAISAGDY---HSMVI 801

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQT 419
              G ++A+G    GQLG    NN T
Sbjct: 802 KSDGTVWAWGRNSNGQLG----NNST 823



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 96/377 (25%), Positives = 167/377 (44%), Gaps = 35/377 (9%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E S   A  GHS+A+ S G ++++G N+ GQLG+ +  +     P++ L G+  I  +AG
Sbjct: 319 EVSAISAAFGHSMALKSDGTLWTWGYNNRGQLGNNSITQSL--VPVQVLTGVASI--SAG 374

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--T 161
              ++ +   G V+A+G++ +G  ++G   T     P  V  L  +  + A   N +  +
Sbjct: 375 YDYSLAVKSDGTVWAWGRNYYG--QFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHS 432

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
             L  +G V+ + + +  +LG+++    + P   LG      VV I+AG  + +AL    
Sbjct: 433 LALKSDGTVWGWGYNSTGQLGNNSATQSLVPVQALGL---TGVVSISAGSNHSMALK--- 486

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRV 280
           S    +  G    G+LG+ S      P      Q+  L  V  ++AG +H+  +  DG V
Sbjct: 487 SDGTAWIWGGNSDGQLGNNSTAQSLVP-----VQVPGLSGVSAISAGNYHSMALKSDGTV 541

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             WG    G LG+ +     VP  +Q L    +  V+ G Y +  +  DG V+ +G  E 
Sbjct: 542 WAWGRNSSGQLGNNSTTVSLVP--IQVLTGTTS--VSAGTYHSMALKSDGAVWGWGNNEY 597

Query: 341 ASLGHNAIAD------GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
             +  N   D         N + +      V S +++         T+S     ++ AL 
Sbjct: 598 KKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIA-----TSSGGSYGYSLALK 652

Query: 395 ESGKLYAFGAGDKGQLG 411
               ++A+G G  G LG
Sbjct: 653 SDKTVWAWGYGGSGVLG 669



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 22/305 (7%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q +AG  H++A+ S G V+++G N  G+LG G+T     P  +  L  +  I AA   G
Sbjct: 271 AQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSAISAA--FG 328

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +   G ++ +G ++ G+    +    +  S   V+ L  +  + A  G  ++  + 
Sbjct: 329 HSMALKSDGTLWTWGYNNRGQ----LGNNSITQSLVPVQVLTGVASISA--GYDYSLAVK 382

Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
            +G V+  +WG +   + G+++  + + P  + G L  +  +   +   Y  +LA +  G
Sbjct: 383 SDGTVW--AWGRNYYGQFGNNSTIDSLVPIQVSG-LTGVTSISATSSNNYSHSLALKSDG 439

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
             V+  G    G+LG+ S T    P      Q L L  VV ++AG+ H+  +  DG    
Sbjct: 440 -TVWGWGYNSTGQLGNNSATQSLVP-----VQALGLTGVVSISAGSNHSMALKSDGTAWI 493

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG    G LG+ +     VP  V  L+ V AI  + G+Y +  +  DG V+++G   S  
Sbjct: 494 WGGNSDGQLGNNSTAQSLVPVQVPGLSGVSAI--SAGNYHSMALKSDGTVWAWGRNSSGQ 551

Query: 343 LGHNA 347
           LG+N+
Sbjct: 552 LGNNS 556



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 20/303 (6%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG GHS+A+ S G  +++G N+ G LG+ +T     P  +  L G+  ++  AG   
Sbjct: 690 QISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSSVK--AGRLH 747

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +M +   G V+A+G ++ G+   G    +LV  P  V  L+++  + A  G++ + V+  
Sbjct: 748 SMALKSDGTVWAWGYNTEGQLGDGSTTQRLV--PVQVSGLEDVIAISA--GDYHSMVIKS 803

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +G V+ +   ++ +LG+++    + P  + G      V  I+AG     A+    + +A 
Sbjct: 804 DGTVWAWGRNSNGQLGNNSTTGSLVPVQVPGL---TGVALISAGTNTSAAVKSDGTALA- 859

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
              G    G+L  GS      P  + +   +    +VVA    H+ ++  DG V  WG G
Sbjct: 860 --WGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANS--HSLILKLDGTV--WGCG 913

Query: 287 R--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           R  YG +G+ +     VP  VQ L     + ++ G Y +  +  DG ++ +G      LG
Sbjct: 914 RNDYGPIGNNSITDSKVP--VQTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLG 971

Query: 345 HNA 347
            N+
Sbjct: 972 DNS 974



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 84/321 (26%), Positives = 135/321 (42%), Gaps = 35/321 (10%)

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
           Q  AG    + +   G V+A+G + +G    G    ++V  P  V  L  +  + AA G+
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIV--PVQVSGLTEVSAISAAFGH 329

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
             +  L  +G ++T+ + N  +LG+++    + P  +L       V  I+AGY Y LA+ 
Sbjct: 330 --SMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQVL-----TGVASISAGYDYSLAVK 382

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
              S   V++ G    G+ G+ S  D   P  +     +       +    H+  +  DG
Sbjct: 383 ---SDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDG 439

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            V  WG+   G LG+ +     VP  VQAL     + ++ G   +  +  DG  + +G  
Sbjct: 440 TVWGWGYNSTGQLGNNSATQSLVP--VQALGLTGVVSISAGSNHSMALKSDGTAWIWGGN 497

Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
               LG+N+ A          L P  V  L  V+     IS  N      H+ AL   G 
Sbjct: 498 SDGQLGNNSTAQS--------LVPVQVPGLSGVS----AISAGNY-----HSMALKSDGT 540

Query: 399 LYAFGAGDKGQLGIELVNNQT 419
           ++A+G    GQLG    NN T
Sbjct: 541 VWAWGRNSSGQLG----NNST 557



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 16/258 (6%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   AG  HS+A+ S G V+++G N+ GQLG G+T +   P  +  L+   +I  +AG  
Sbjct: 739 SSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGLED--VIAISAGDY 796

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M+I   G V+A+G++S G  + G   T     P  V  L  + ++ A  G   +A + 
Sbjct: 797 HSMVIKSDGTVWAWGRNSNG--QLGNNSTTGSLVPVQVPGLTGVALISA--GTNTSAAVK 852

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G     +WG++   G   + ++++    +   E + V  ++       +L  +  G  
Sbjct: 853 SDGT--ALAWGSNT-YGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDG-T 908

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           V+  G    G +G+ S TD K P      Q L L  VV ++AG +H+  +  DG +  WG
Sbjct: 909 VWGCGRNDYGPIGNNSITDSKVP-----VQTLGLAGVVSISAGLYHSMALKSDGTIWGWG 963

Query: 285 WGRYGCLGHGNEECESVP 302
           +  YG LG  +      P
Sbjct: 964 YNGYGQLGDNSTTSRLAP 981


>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
 gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
 gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
 gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
          Length = 520

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I +L    I+ AA G   T+ ++D 
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 219 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 276

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 337 ANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 393

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 394 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 446

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 447 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 495



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +ML+   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 264 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 381 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 488

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 489 MGYSHSLVIARD 500



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 273

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 385

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 372 RLVKLFDFPG-----RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 420

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 481 GIFSEQVAMGYSHSLVIARD 500



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 224

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D +  I      +T+   ++ G VY +G C G+S  L H
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 89

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 90  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 206

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 264

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 265 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 317

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 318 STHTSAAKTQGGHVYMWGQCR 338



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
           LQ IR       AG  +L +    +++  G +  G    G VQ T     P+ ++SL   
Sbjct: 42  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98

Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
            +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V++
Sbjct: 99  KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156

Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           +A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A 
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
           G      V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           +++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + 
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321

Query: 387 NAHTFALTESGKLYAFG 403
           +A   A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 3/169 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  HS+AV + G V+S+GSN  GQLG  +      P+ I  L G  I+Q AAG   
Sbjct: 144 QVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAH 203

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ I+++G +  +GK+SFG+   G      V SP  V SL++  +  AA G   TAVL++
Sbjct: 204 SLAITNSGALLTWGKNSFGQLGLGTNDG--VLSPTCVSSLRSQHIAYAACGEDHTAVLTK 261

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
           EG V+TF  G+  +LGH++  +   P  ++  L  I V QI  G  Y L
Sbjct: 262 EGGVFTFGAGSSGQLGHNSLSHHCSPQMVVD-LMGIVVTQITCGRFYAL 309



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 16/276 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA-GAGRTML 109
           G  H+I +   G +YS GSN  GQ G     +  R   I + + +RI   ++ GA   + 
Sbjct: 42  GLNHTILLLQDGQIYSCGSNDYGQTGRQRNNK--RFARIDAFESMRITNVSSNGANHNLA 99

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           I+D   +YA+G +S G+     Q  K    +P+ ++SL    VVQ A G   +  +  +G
Sbjct: 100 INDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDG 159

Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            V  FSWG++   +LG  +  + VEP  +L  L    +VQIAAG  +  +LA   SG A+
Sbjct: 160 TV--FSWGSNRYGQLGIDSNVSSVEPKQIL-KLSGFYIVQIAAGGAH--SLAITNSG-AL 213

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGW 285
            + G    G+LG G+      P  +     L  Q +  AA G  H AV+ ++G V T+G 
Sbjct: 214 LTWGKNSFGQLGLGTNDGVLSPTCVSS---LRSQHIAYAACGEDHTAVLTKEGGVFTFGA 270

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
           G  G LGH +      P++V  L  +    +  G +
Sbjct: 271 GSSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRF 306



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 24/191 (12%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           +Y+ G    G+LG   +  ++  R   Q + L+   VV VA G  H+  V  DG V +WG
Sbjct: 106 IYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWG 165

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             RYG LG  +      PK +  L+    + +A G   +  ++  G + ++G     S G
Sbjct: 166 SNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWG---KNSFG 222

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA----HTFALTESGKLY 400
              +    G     VL+P  V+SL+           +  I + A    HT  LT+ G ++
Sbjct: 223 QLGLGTNDG-----VLSPTCVSSLR-----------SQHIAYAACGEDHTAVLTKEGGVF 266

Query: 401 AFGAGDKGQLG 411
            FGAG  GQLG
Sbjct: 267 TFGAGSSGQLG 277



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 21/190 (11%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +YS G    G+ G   R +++  R I+ F+ + +  V  + GA H   +     +  WG 
Sbjct: 55  IYSCGSNDYGQTGR-QRNNKRFAR-IDAFESMRITNVS-SNGANHNLAINDKNCIYAWGD 111

Query: 286 GRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
              G LG  ++  +     P+ +++L+    + VA G   +  V  DG V+S+G      
Sbjct: 112 NSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQ 171

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG ++          NV + +    LK     +VQI+        AH+ A+T SG L  +
Sbjct: 172 LGIDS----------NVSSVEPKQILKLSGFYIVQIAAGG-----AHSLAITNSGALLTW 216

Query: 403 GAGDKGQLGI 412
           G    GQLG+
Sbjct: 217 GKNSFGQLGL 226


>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
          Length = 483

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 163/361 (45%), Gaps = 42/361 (11%)

Query: 49  IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    I+ AA G   
Sbjct: 114 VSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNH 173

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  
Sbjct: 174 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDC 231

Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
           +G +Y+F      +LGH+++            D E  P              +  + N+ 
Sbjct: 232 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 291

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         
Sbjct: 292 VRDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 348

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           + AG   +  V + G +  WG        + + E    PK VQ L   K   +A G  ++
Sbjct: 349 IYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 401

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
            +V+ D    S+  G S + G     D   ++  +    Q V +L  +    V +  ++S
Sbjct: 402 IIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIYTEQVAMGYSHS 456

Query: 384 I 384
           +
Sbjct: 457 L 457



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 167 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAIPSPAQIMYNGQPITKMACGAEF 225

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 226 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 284

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 285 LPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 342

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 343 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 393

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 394 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 450

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 451 MGYSHSLVIARD 462



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 99  PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 156

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E   +L+ + +V AA G  H   + + G V  +G  + G LG GN+  +++P   Q + +
Sbjct: 157 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAIPSPAQIMYN 212

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 213 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 272

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 273 AIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 323



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 67/330 (20%)

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 78  GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 123

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
             +++ EG+++++      +LGH  +   VE   L+  L    +V  A G  + LAL   
Sbjct: 124 --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 180

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
            S   V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 181 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 233

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 234 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 293

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 294 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 345

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             QI    +      +FA++E G L+ +GA
Sbjct: 346 AAQIYAGYTC-----SFAVSEVGGLFFWGA 370



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 97  WGPHRYGCL--------SGVQVRTVVSGPCAAH-------SLLITTEGKLWSWGRNEKGQ 141

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L +  E +V  +   +     HT ALTE+G ++AF
Sbjct: 142 LGH-----GDTKR---VEAPKLIEVLSK--EVIVSAACGRN-----HTLALTETGSVFAF 186

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 187 GENKMGQLGL---GNQTD 201



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  +Q  AG   S AV+  G ++ +G+ ++      + E    P+ ++ L G +I   A 
Sbjct: 344 RGAAQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWKIRSLAC 397

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  I+  Q A+G   + 
Sbjct: 398 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 457

Query: 163 VLSRE 167
           V++R+
Sbjct: 458 VIARD 462


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
           [Equus caballus]
          Length = 911

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG  
Sbjct: 2   QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGA 61

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++ +G ++ +G++ FG+   G+        P L++SL+   +V    G   TA L+
Sbjct: 62  HSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALT 119

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           +EG V+TF  G   +LGH++  +++ P  +   + +I V QIA G  +  A    PS   
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 176

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
           +YS G G  G+LG GS ++ K P  ++
Sbjct: 177 IYSFGLGGNGQLGTGSTSNRKSPFTVK 203



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 26/225 (11%)

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV 263
           VQ+A GY + LAL+       V+  G    G+LG G     +  P+LI+   LL +  + 
Sbjct: 1   VQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKS--LLGIPFMQ 55

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           VAAG  H+ V+   G +  WG  ++G LG  +E     P ++++L   K +++  G+  T
Sbjct: 56  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHT 115

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             ++++G V++FG G    LGHN+ +     R    L   +VT          QI+    
Sbjct: 116 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ 165

Query: 384 IYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 423
                HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 166 -----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 205



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+AA
Sbjct: 1   VQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAA 58

Query: 210 G--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           G  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V +  G
Sbjct: 59  GGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCG 111

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 326
             H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+  V
Sbjct: 112 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 171

Query: 327 SEDGDVYSFGCGESASLG 344
              G +YSFG G +  LG
Sbjct: 172 PSSGRIYSFGLGGNGQLG 189



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 55  QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 114

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 115 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 172

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 173 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 204


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 10/312 (3%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G       PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  VV IA G   +  +A   +G  VY  G    G+LG G+ 
Sbjct: 162 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  +   Q + +Q   VA G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
             V    D +  I      +T+   ++ G VY +G C G+S  L H        +  A  
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 336

Query: 360 LTPQLVTSLKQV 371
            TP +   L  V
Sbjct: 337 ATPAVTWRLLSV 348



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEP 65

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 66  RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++I+ A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 182

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
           VV  A G      +   G VY + +  + +LG     N  +P P  +  L+ I V ++A 
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 240

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P    +E+ +++     + A  
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 293

Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
           + H +A   Q G V  WG  R
Sbjct: 294 STHTSAAKTQGGHVYMWGQCR 314



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 26/316 (8%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           LQ IR       AG  +L +    +++  G +  G    G+   +    P+ ++SL    
Sbjct: 18  LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC--LGLGDVRSTIEPRRLDSLNGKK 75

Query: 151 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           +   + G+    VL + EG V  F+WG++A  +LG+ T  + + P  +   L N  V+++
Sbjct: 76  IACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + L L    S   V++ G    G++G GS  ++  PR +    L N   V +A G
Sbjct: 134 ACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIACG 189

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
                 V   G V  WG+   G LG GN   +  P  V AL  ++   VA G   T V++
Sbjct: 190 QMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 249

Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 387
           ++G VY++G      L       G GN+ +N   P  VT  K   +R+++I+  +S + +
Sbjct: 250 DEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHTS 298

Query: 388 AHTFALTESGKLYAFG 403
           A   A T+ G +Y +G
Sbjct: 299 A---AKTQGGHVYMWG 311



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P+ V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                   GN   N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
              GQLG     N++ +  P  V ++
Sbjct: 260 NSYGQLG---TGNKSNQSYPTPVTVE 282


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 158/369 (42%), Gaps = 37/369 (10%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E +   AG  H +A    G V+++G N+ GQLG GTT +   P  +  L    ++  AAG
Sbjct: 400 ERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPGL--TNMVAVAAG 457

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ +   G V+A+G ++ G+   G   T   ++P  V  L  +  + A  G+     
Sbjct: 458 HHSSLALKADGTVWAWGDNANGQLGNGS--TTDRSNPTQVPGLTGVVSIAAGPGHAL--A 513

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +  +G ++T+   N  +LG  T  +   P  + G      VV +AAG  + L +    + 
Sbjct: 514 VKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGV---TGVVSVAAGLYHSLVVKVDGT- 569

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
             V++ G    G+LG G+ T    P      Q  NL  VV + AG +H+  +  DG V  
Sbjct: 570 --VWAWGSNYEGQLGGGTTTIRPVPS-----QTPNLTGVVAITAGLYHSLALKTDGTVWA 622

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG+  +G LG+GN   + VP  V   +    + +  G Y +  +  DG V+++G      
Sbjct: 623 WGYNLHGQLGNGNTTTQQVPTQVPGFS--GGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQ 680

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG                T     S     E               H+ AL   G  +A+
Sbjct: 681 LGDGTTTSRTTPTQVAGFTG---VSFLAAGEF--------------HSVALRTDGTAWAW 723

Query: 403 GAGDKGQLG 411
           G+ DKGQLG
Sbjct: 724 GSNDKGQLG 732



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 176/382 (46%), Gaps = 45/382 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++GSN +G+LG GTT +   P  ++ L  I+ I  AAG   ++ 
Sbjct: 155 AGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAI--AAGNAHSLA 212

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G+V+A+G +S G+      G +++  P LV  L N   + A   +     L R+  
Sbjct: 213 LDGTGRVWAWGSNSNGQLGDTTAGYRML--PALVPGLTNATGLSAGSNHS----LVRQAD 266

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
             T+ WG +   +LG  T  +   P  + G L  +  V  A     L +L  +  G  V+
Sbjct: 267 GTTWVWGANTYGQLGDGTTTSRSAPQQVSG-LAGVDGVLGAE----LHSLVLKSDGT-VW 320

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGA-WHAAVVGQDGRVCTWGW 285
           + G    G+LG G+    +  RL+   Q++ L  VV VAAG+  H+  V  +G V TWG 
Sbjct: 321 TWGSNQRGQLGDGT----QEQRLVP-VQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGH 375

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
              G LG G+    +VPK   AL  V+   VA G Y       DG V+++G      LG 
Sbjct: 376 NVEGQLGEGSSSYSAVPKRSHAL--VERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGD 433

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                      A  L P  V  L   N   V     +S+       AL   G ++A+G  
Sbjct: 434 GTT--------AQRLLPTQVPGL--TNMVAVAAGHHSSL-------ALKADGTVWAWGDN 476

Query: 406 DKGQLGIELVNNQTERGNPERV 427
             GQLG     + T+R NP +V
Sbjct: 477 ANGQLGN---GSTTDRSNPTQV 495



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 169/363 (46%), Gaps = 36/363 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V+++G N+ GQLG GTT     P  +  L    +++ AAG   ++ 
Sbjct: 105 AGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLG--EVVRVAAGFSHSLA 162

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +  G    G    +L+  P  V+ L  I  +  A GN  +  L   GR
Sbjct: 163 LKTDGTVWAWGSNGAGRLGDGTTTQRLM--PVQVQGLPTIKAI--AAGNAHSLALDGTGR 218

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ +   ++ +LG  T    + P  L+  L N     ++AG  +  +L  Q  G   +  
Sbjct: 219 VWAWGSNSNGQLGDTTAGYRMLP-ALVPGLTN--ATGLSAGSNH--SLVRQADGT-TWVW 272

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRY 288
           G    G+LG G+ T    P+     Q+  L  V    GA  H+ V+  DG V TWG  + 
Sbjct: 273 GANTYGQLGDGTTTSRSAPQ-----QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQR 327

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G +E   VP  V  L+ V A+   +G ++  V++ +G+V+++G      L     
Sbjct: 328 GQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMA-NGEVWTWGHNVEGQL----- 381

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
             G+G+   + +        K+ +  V + S+    Y   H  A    G ++A+G   KG
Sbjct: 382 --GEGSSSYSAVP-------KRSHALVERTSVAAGRY---HGLASKPDGTVWAWGDNAKG 429

Query: 409 QLG 411
           QLG
Sbjct: 430 QLG 432



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 164/368 (44%), Gaps = 37/368 (10%)

Query: 45  NSQAIAGPGHS-IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           N  A+A   HS +A+ + G V+++G N++GQLG+G+T +   P  +  L G  ++  AAG
Sbjct: 450 NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLTG--VVSIAAG 507

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
            G  + +   G ++ +G ++ G+   G      V  P   +      VV  A G + + V
Sbjct: 508 PGHALAVKADGTLWTWGDNNTGQLGDGTT----VDRPIPTQVPGVTGVVSVAAGLYHSLV 563

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           +  +G V+ +    + +LG  T    + P P   T     VV I AG  + LAL    + 
Sbjct: 564 VKVDGTVWAWGSNYEGQLGGGT--TTIRPVPSQ-TPNLTGVVAITAGLYHSLALKTDGT- 619

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V++ G  L G+LG+G+ T ++ P  +  F       V + AG +H+  +  DG V TW
Sbjct: 620 --VWAWGYNLHGQLGNGNTTTQQVPTQVPGFS----GGVSLGAGIYHSLAIKTDGSVWTW 673

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           G+   G LG G     + P  V     V    +A G++ +  +  DG  +++G  +   L
Sbjct: 674 GYNYRGQLGDGTTTSRTTPTQVAGFTGVS--FLAAGEFHSVALRTDGTAWAWGSNDKGQL 731

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G     DG    H     P L    + V  R +          +  T A    G ++A+G
Sbjct: 732 G-----DGSARWH---YAPTLS---RLVGARGLAAG-------DRFTAARKSDGTVWAWG 773

Query: 404 AGDKGQLG 411
               GQLG
Sbjct: 774 DNTYGQLG 781



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 178/415 (42%), Gaps = 73/415 (17%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS+A+ + G  +++GSN  GQLG G+    + P   R L G R +  AAG   T  
Sbjct: 706  AGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSR-LVGARGL--AAGDRFTAA 762

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
                G V+A+G +++G+      GT L T SP  V  L ++  + A  G+    V+  +G
Sbjct: 763  RKSDGTVWAWGDNTYGQLG---DGTTLATRSPAQVSGLTDVEGLAAGEGHVV--VVKMDG 817

Query: 169  RVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             V+T  WGN+A+  LG  T    + P  + G      VV +AAGY + LAL    +   V
Sbjct: 818  TVWT--WGNNAKGQLGDGTTTRRLVPTQVPGL---TGVVAVAAGYAHSLALKADGT---V 869

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            +  G  + G+LG G+ T    P   +   ++    + +A+G +H      DG +  WG+ 
Sbjct: 870  WGWGENIYGQLGDGTTTQRVAPTQAQGLTVV----LSMASGTYHGLARKADGTLWAWGYN 925

Query: 287  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             +G LG G       P +V +L+ V  + ++     +  +  DG V+++G   +  LG  
Sbjct: 926  AHGQLGIGTTTTRLAPTLVPSLSGV--VSLSATHQHSLALKPDGTVWAWGYNSNGQLGDG 983

Query: 347  AIADGQGNRHANVLTPQLVTSLKQV---------------------NER----------- 374
                    RH     P L +S+K V                     N+R           
Sbjct: 984  TTT----TRHVPTQAPSL-SSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPR 1038

Query: 375  --VVQISLTNSIYWNAHTFA----LTESGKLYAFGAGDKGQLG-----IELVNNQ 418
                Q++  NS+       A    ++  G +  FG  + GQLG     I L  NQ
Sbjct: 1039 ATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLIRLAPNQ 1093



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 163/363 (44%), Gaps = 36/363 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H++AV S G V+++G N+ GQLG+G+ +++    P+R+     I    AG   ++ 
Sbjct: 55  AGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQ--RVPVRAWGLWNISAVGAGDLHSLA 112

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+ +G ++FG+   G   T    +P  V  L    VV+ A G   +  L  +G 
Sbjct: 113 MKSDGTVWTWGGNNFGQLGDGT--TTGRQAPVQVPGLGE--VVRVAAGFSHSLALKTDGT 168

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 228
           V+ +      RLG  T    + P  + G    +P ++ IAAG  + LAL        V++
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMPVQVQG----LPTIKAIAAGNAHSLALDGTGR---VWA 221

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG  +      P L+            ++AG+ H+ V   DG    WG   Y
Sbjct: 222 WGSNSNGQLGDTTAGYRMLPALVPGLT----NATGLSAGSNHSLVRQADGTTWVWGANTY 277

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G LG G     S P+ V  L  V  +  A  +  + V+  DG V+++G  +   LG    
Sbjct: 278 GQLGDGTTTSRSAPQQVSGLAGVDGVLGA--ELHSLVLKSDGTVWTWGSNQRGQLG---- 331

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            DG   +    L P  V  L      VV ++  +      H+ A+  +G+++ +G   +G
Sbjct: 332 -DGTQEQR---LVPVQVMGL----SGVVAVAAGS----GQHSVAVMANGEVWTWGHNVEG 379

Query: 409 QLG 411
           QLG
Sbjct: 380 QLG 382



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 154/362 (42%), Gaps = 36/362 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AGPGH++AV + G ++++G N++GQLG GTT +  RP P +      ++  AAG   +++
Sbjct: 506 AGPGHALAVKADGTLWTWGDNNTGQLGDGTTVD--RPIPTQVPGVTGVVSVAAGLYHSLV 563

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G +   E + G   T +   P    +L  +  + A +  + +  L  +G 
Sbjct: 564 VKVDGTVWAWGSNY--EGQLGGGTTTIRPVPSQTPNLTGVVAITAGL--YHSLALKTDGT 619

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + +    +LG+        P  + G       V + AG  + LA+    S   V++ 
Sbjct: 620 VWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG---VSLGAGIYHSLAIKTDGS---VWTW 673

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ T    P  +  F  ++     +AAG +H+  +  DG    WG    G
Sbjct: 674 GYNYRGQLGDGTTTSRTTPTQVAGFTGVSF----LAAGEFHSVALRTDGTAWAWGSNDKG 729

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G+      P + +    V A  +A GD  T     DG V+++G      LG     
Sbjct: 730 QLGDGSARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTT- 785

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
                      +P  V+ L  V                 H   +   G ++ +G   KGQ
Sbjct: 786 -------LATRSPAQVSGLTDVEGLAAG---------EGHVVVVKMDGTVWTWGNNAKGQ 829

Query: 410 LG 411
           LG
Sbjct: 830 LG 831



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 163/367 (44%), Gaps = 46/367 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++G N  GQLG GTT     P  +    G+  +  AAG   ++ 
Sbjct: 656 AGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFL--AAGEFHSVA 713

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G  +A+G +  G+   G    +   +P L    + +     A G+ FTA    +G 
Sbjct: 714 LRTDGTAWAWGSNDKGQ--LGDGSARWHYAPTLS---RLVGARGLAAGDRFTAARKSDGT 768

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V+  +WG++   +LG  T      P  + G  +   V  +AAG  +++ +    +   V+
Sbjct: 769 VW--AWGDNTYGQLGDGTTLATRSPAQVSGLTD---VEGLAAGEGHVVVVKMDGT---VW 820

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG G+ T     R +   Q+  L  VV VAAG  H+  +  DG V  WGWG
Sbjct: 821 TWGNNAKGQLGDGTTT-----RRLVPTQVPGLTGVVAVAAGYAHSLALKADGTV--WGWG 873

Query: 287 R--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              YG LG G       P   Q L  V  + +A+G Y       DG ++++G      LG
Sbjct: 874 ENIYGQLGDGTTTQRVAPTQAQGLTVV--LSMASGTYHGLARKADGTLWAWGYNAHGQLG 931

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                          L P LV SL      VV +S T+      H+ AL   G ++A+G 
Sbjct: 932 IGTTT--------TRLAPTLVPSL----SGVVSLSATHQ-----HSLALKPDGTVWAWGY 974

Query: 405 GDKGQLG 411
              GQLG
Sbjct: 975 NSNGQLG 981



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 33/316 (10%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           R+   AAG   T+ +   G V+A+G +++G+   G    + V  P     L NI  V A 
Sbjct: 49  RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRV--PVRAWGLWNISAVGA- 105

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G+  +  +  +G V+T+   N  +LG  T      P  + G  E   VV++AAG+ + L
Sbjct: 106 -GDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGE---VVRVAAGFSHSL 161

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL    +   V++ G    G+LG G+ T    P  ++    +      +AAG  H+  + 
Sbjct: 162 ALKTDGT---VWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIK----AIAAGNAHSLALD 214

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
             GRV  WG    G LG        +P +V  L +  A  ++ G   + V   DG  + +
Sbjct: 215 GTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTN--ATGLSAGSNHSLVRQADGTTWVW 272

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G      LG         +R A    PQ V+ L  V + V+   L        H+  L  
Sbjct: 273 GANTYGQLGDGTTT----SRSA----PQQVSGLAGV-DGVLGAEL--------HSLVLKS 315

Query: 396 SGKLYAFGAGDKGQLG 411
            G ++ +G+  +GQLG
Sbjct: 316 DGTVWTWGSNQRGQLG 331



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 152/365 (41%), Gaps = 40/365 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ + G V+++G N  GQLG+G T  +  P  +    G   +   AG   ++ 
Sbjct: 606 AGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG--VSLGAGIYHSLA 663

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I   G V+ +G +  G+   G   T   T  Q+       F+   A G F +  L  +G 
Sbjct: 664 IKTDGSVWTWGYNYRGQLGDGTT-TSRTTPTQVAGFTGVSFL---AAGEFHSVALRTDGT 719

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 228
            + +   +  +LG  +      P     TL  +   + +AAG  +    A + S   V++
Sbjct: 720 AWAWGSNDKGQLGDGSARWHYAP-----TLSRLVGARGLAAGDRFT---AARKSDGTVWA 771

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG G+    + P      Q+  L  V  +AAG  H  VV  DG V TWG   
Sbjct: 772 WGDNTYGQLGDGTTLATRSPA-----QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNA 826

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G      VP  V  L  V  + VA G   +  +  DG V+ +G      LG   
Sbjct: 827 KGQLGDGTTTRRLVPTQVPGLTGV--VAVAAGYAHSLALKADGTVWGWGENIYGQLG--- 881

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG         T Q V +  Q     V +S+ +  Y   H  A    G L+A+G    
Sbjct: 882 --DGT--------TTQRV-APTQAQGLTVVLSMASGTY---HGLARKADGTLWAWGYNAH 927

Query: 408 GQLGI 412
           GQLGI
Sbjct: 928 GQLGI 932



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 22/259 (8%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS+A+ + G V+ +G N  GQLG GTT +  R  P ++ QG+ ++ + A      L
Sbjct: 855  AGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ--RVAPTQA-QGLTVVLSMASGTYHGL 911

Query: 110  ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
               A G ++A+G ++ G+   G   T+L  +P LV SL  +  + A   +  +  L  +G
Sbjct: 912  ARKADGTLWAWGYNAHGQLGIGTTTTRL--APTLVPSLSGVVSLSAT--HQHSLALKPDG 967

Query: 169  RVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
             V+ + + ++ +LG  T      P   P L +++      ++AG+ Y LA+    +   V
Sbjct: 968  TVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSSVK-----AVSAGFEYSLAVKADGT---V 1019

Query: 227  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            +S G    G+LG G+ T    P  +     + L     A     A VV  DG +  +G  
Sbjct: 1020 WSWGINDRGQLGSGTATPRATPTQVAGLNSVTLLLAARAH----ALVVSADGTMRGFGDN 1075

Query: 287  RYGCLGHGNEECESVPKVV 305
              G LG G+      P  V
Sbjct: 1076 EAGQLGAGDTLIRLAPNQV 1094


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 8/275 (2%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V++ A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N  +V IA G   + ++A   +G  V+  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVIVTIACGQ--MCSMAVVDTG-EVFVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 336
             V    D V  I      +T+   ++ G VY +G
Sbjct: 301 TPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 45  NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
           N Q I    G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ   I+  
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTI 210

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
           A G   +M + D G+V+ +G +  G+   G  G +   +P  + +L+ I V + A G   
Sbjct: 211 ACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAH 268

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
           T VL+ EG+VY +   +  +LG   + N   P P++  +E   V++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRVIEIAA 315



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 3/122 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G V+ +G N +GQLG G++  +  P  I +LQGIR+ + A G   T++++D G
Sbjct: 217 SMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVYA+G +S+G+   G +  +   +P +VE    +  + A      +A  ++ G VY   
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRVIEIAACHSAHTSAAKTQGGHVYM-- 333

Query: 175 WG 176
           WG
Sbjct: 334 WG 335



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +   + +A G   +  V + G+V+ +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 24/290 (8%)

Query: 28  KLVLRFLLAGEAC------CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
           +++ RFL++          C + N+ A+  PG+        VV S+G    GQLGHG T+
Sbjct: 36  EMLARFLISTPLLPESWRLCSKVNASAVNFPGN--------VVCSWGRGEDGQLGHGDTD 87

Query: 82  EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSP 140
           +   P  + +  G  I+    GA  T+  S +G+ VY++G   FG   +G      +  P
Sbjct: 88  DRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP 147

Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
             + +L+ + + Q + G+     ++ E +V ++    +  LG  T  +   P  +L   E
Sbjct: 148 --IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKIL-AFE 204

Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            I +  +AAG  + +A+        +Y  G G  G LG G   D   P   E+  +   +
Sbjct: 205 GIRIKMVAAGAEHSVAITEDGD---LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGDK 258

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
            V+V+ G  H   +   G + T GW +YG LGHG+ E   VP+ VQAL+D
Sbjct: 259 IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSD 308



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 27/276 (9%)

Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           L+++P L ES +    V A+  NF   V+   GR      G D +LGH    + + P  L
Sbjct: 42  LISTPLLPESWRLCSKVNASAVNFPGNVVCSWGR------GEDGQLGHGDTDDRLLPTKL 95

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
               +   +V +  G  Y +A +   SG  VYS G G  G+LGHG  +D   P  I   Q
Sbjct: 96  -SAFDGQDIVSVTCGADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQ 152

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
            L ++ +  + G  H   V  + +V +WG  + G LG G  +   VP+ + A   ++   
Sbjct: 153 GLRIKQI--SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKM 210

Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
           VA G   +  ++EDGD+Y +G G   +LG     D         L P+ V       +++
Sbjct: 211 VAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--------RLIPEKVNI---DGDKI 259

Query: 376 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           V +S      W  HT +++ SG LY  G    GQLG
Sbjct: 260 VMVSCG----WR-HTISISSSGGLYTHGWSKYGQLG 290



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 21/216 (9%)

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           A A    G  V S G G  G+LGHG   D   P  +  F   ++  V V  GA +     
Sbjct: 60  ASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VSVTCGADYTVARS 117

Query: 276 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           + G+ V +WGWG +G LGHG+     +P  ++AL  ++   ++ GD     V+ +  V S
Sbjct: 118 KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLS 177

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  ++  LG     D           PQ + + + +  ++V            H+ A+T
Sbjct: 178 WGRNQNGELGLGTTKDSH--------VPQKILAFEGIRIKMVAAG-------AEHSVAIT 222

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
           E G LY +G G  G LG+    +  +R  PE+V+ID
Sbjct: 223 EDGDLYGWGWGRYGNLGL---GDTNDRLIPEKVNID 255


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 39/341 (11%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ + S   + +   A G     +++  G+VY +G+   G    G +    ++SP++V+S
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDISSPKIVDS 352

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE---PNDVEPHPLLGTLENI 202
           L +I V + A G + T  L+  G VYT  WG D+      E    +    H     +E I
Sbjct: 353 LSDIRVKKVACGEYHTCALTDSGDVYT--WGKDSCSDLVDEGRIRSQWLTHKFSLPVEGI 410

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            +  IA G  +   ++   S   +++ G G  G LGHG+      P+ +E  + L ++ V
Sbjct: 411 SISSIACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSV 467

Query: 263 VVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
             A G WH A + +            G++ TWG    G LGH +   + VP  V  L D 
Sbjct: 468 --ACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY 525

Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 371
             + V+ G   T  ++  G V++ G  +   LG+  + D      A V+       LKQ 
Sbjct: 526 DFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD-----RAVVVEGM----LKQ- 575

Query: 372 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            E V  IS       + H   LT SG +Y +G G+ G+LG+
Sbjct: 576 -EYVKMISCG-----SYHVAVLTSSGSVYTWGKGENGELGL 610



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 140/304 (46%), Gaps = 48/304 (15%)

Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
           E  VQ +     P+L+ES   + V   A+G    A+++++G VY +  G   RLG   + 
Sbjct: 283 ERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDM 342

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
            D+    ++ +L +I V ++A G  +  AL    SG  VY+      GK       DE  
Sbjct: 343 -DISSPKIVDSLSDIRVKKVACGEYHTCALT--DSG-DVYT-----WGKDSCSDLVDEGR 393

Query: 248 PR---LIEQFQLLNLQPV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
            R   L  +F L    PV       +A G WH A+V   GR+ T+G G +G LGHGN   
Sbjct: 394 IRSQWLTHKFSL----PVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHS 449

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNA 347
            S PK V++L  +    VA G + T  + E            G ++++G  +   LGH  
Sbjct: 450 FSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGH-- 507

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
            AD     + N L P  V+ L  V+   VQ+S    +     T ALT  GK++A G+   
Sbjct: 508 -AD-----NVNKLVPTCVSQL--VDYDFVQVSCGRMM-----TLALTNMGKVFAMGSAKY 554

Query: 408 GQLG 411
           GQLG
Sbjct: 555 GQLG 558



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 24/291 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQL-GHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
            G  H+ A+T  G VY++G +S   L   G    +W        ++GI I   A G   T
Sbjct: 363 CGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHT 422

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            ++S  G+++ +G  +FG   +G   +   +SP+ VESLK + V   A G + TA +   
Sbjct: 423 AIVSSCGRLFTYGDGTFGVLGHGNYHS--FSSPKEVESLKGLCVRSVACGTWHTAAIIEV 480

Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
                   +  G+++T+   ++ RLGH    N + P   +  L +   VQ++ G    LA
Sbjct: 481 SAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLVDYDFVQVSCGRMMTLA 539

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVG 275
           L    +   V+++G    G+LG+    D    R +    +L  + V +++ G++H AV+ 
Sbjct: 540 LT---NMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 592

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             G V TWG G  G LG G+ E    P  V+AL D +   +  G   T  +
Sbjct: 593 SSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAI 643



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 25/253 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S    G  H+  V+S G ++++G  + G LGHG       P+ + SL+G+ +   A G  
Sbjct: 413 SSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTW 472

Query: 106 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
            T  I           +  G+++ +G    G   +     KLV  P  V  L +   VQ 
Sbjct: 473 HTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLV--PTCVSQLVDYDFVQV 530

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
           + G   T  L+  G+V+        +LG+ H +   V    + G L+   V  I+ G  +
Sbjct: 531 SCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV---VVEGMLKQEYVKMISCGSYH 587

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 268
           +  L    S  +VY+ G G  G+LG G   +   P  +E     Q   +   P    A  
Sbjct: 588 VAVLT---SSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAIC 644

Query: 269 WHAAVVGQDGRVC 281
            H  +   D   C
Sbjct: 645 LHKPISISDQSSC 657


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 16/289 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V + A G++ + VL+ +G V+ + + N  ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N   V IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 218

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 219 GNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H
Sbjct: 277 APVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 322



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 47/320 (14%)

Query: 4   KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
           K  IF   +E E Q ++Q C  G +   VL         + G  CC              
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65

Query: 42  RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
           RR +S   + IA      GP H +  T++G V+++G N+  QLG+GTT     P  I + 
Sbjct: 66  RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
           L   ++ + A G+  +++++  G+V+A+G ++ G+   G    + +  P+ V   L+N  
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKV 182

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
            V  A G   +  +   G VY + +  + +LG  +  N  +P P  +  L+ I V ++A 
Sbjct: 183 AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVAC 240

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
           GY + L L  +     VY+ G    G+LG G+++++ +P   ++E+ +++    +     
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPAPVIVEKDRIIE---IAACHS 294

Query: 268 AWHAAVVGQDGRVCTWGWGR 287
           A  +A   Q G V  WG  R
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR 314



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +  A+++A G   +  V   G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 214

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274


>gi|118373349|ref|XP_001019868.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89301635|gb|EAR99623.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 403

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 28/303 (9%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           A++SK  +Y++G   + + GH   +     P+ I +LQ I  +  + G    + +++  Q
Sbjct: 72  AISSKNELYTWGETKNSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQ 129

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
           +Y  G + +G    G+ G   +   QL +++KNI +   + G+ F+  L    +VY+  +
Sbjct: 130 LYVTGHNKYGAC--GISGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDINQQVYSSGF 187

Query: 176 GNDARLGHHTEPNDVEPHPL--LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                   H    D   + +  +  LE I +  I AG+C+  A+  Q  G  VY+ G G 
Sbjct: 188 RQ-----MHGNKEDQHQYQIKKIKELEGIAIKHINAGFCHS-AVVTQERG-EVYTWGSGN 240

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCL 291
             +LGHG+   +K P  I    L  ++ V  + G    H      DG+V +WG G  G L
Sbjct: 241 FYQLGHGNTKSQKTPLKINN--LSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKL 298

Query: 292 GHGNEEC------ESVPKVVQALNDVKAIHVA---TGDYTTFVVSEDGDVYSFGCGESAS 342
           GH N         ES P+ +Q L + K I +A   +G   + V+S+DG +++FGCG    
Sbjct: 299 GHQNSWSHEDPADESRPRPIQYLQE-KGIVIAKSISGGIHSAVLSQDGRLFTFGCGSDGR 357

Query: 343 LGH 345
           LGH
Sbjct: 358 LGH 360



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 26/355 (7%)

Query: 62  GVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
           G +Y++G NSSG L +   ++ E  P  +++ Q  + +      G    IS   ++Y +G
Sbjct: 26  GFLYTWGKNSSGCLANQKEDQGEIIPFKVKTNQKFKSVSTGGFFGAA--ISSKNELYTWG 83

Query: 121 KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           +     +  G Q  K  +  PQ + +L+NI  V  + GN+    L+ + ++Y        
Sbjct: 84  ETK--NSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQLYVTGHNKYG 139

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
             G  +  +++    L  T++NI +  I+AG  + L L        VYS G     +  H
Sbjct: 140 ACGI-SGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDI---NQQVYSSGF----RQMH 191

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEEC 298
           G++ D+   ++ +  +L  +    + AG  H+AVV Q+ G V TWG G +  LGHGN + 
Sbjct: 192 GNKEDQHQYQIKKIKELEGIAIKHINAGFCHSAVVTQERGEVYTWGSGNFYQLGHGNTKS 251

Query: 299 ESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 356
           +  P  +  L+ ++ +  + G+    T   S DG VYS+G G    LGH      +    
Sbjct: 252 QKTPLKINNLSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKLGHQNSWSHE--DP 309

Query: 357 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           A+   P+ +  L++       I +  SI    H+  L++ G+L+ FG G  G+LG
Sbjct: 310 ADESRPRPIQYLQEKG-----IVIAKSISGGIHSAVLSQDGRLFTFGCGSDGRLG 359



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 33  FLLAGEACCRREN-SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
           ++L  +     +N S    G  H +A+ ++  +Y  G N  G  G    +E    +   +
Sbjct: 98  YILVPQKIMNLQNISHVSCGNWHCLALNNQNQLYVTGHNKYGACGISGIDEINGFQLNDT 157

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           ++ I+I   +AG G ++ +    QVY+ G        +G +  +     + ++ L+ I +
Sbjct: 158 IKNIQICSISAGDGFSLYLDINQQVYSSGFRQM----HGNKEDQHQYQIKKIKELEGIAI 213

Query: 152 VQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
                G   +AV+++E G VYT+  GN  +LGH    +   P  +   L  I  V  + G
Sbjct: 214 KHINAGFCHSAVVTQERGEVYTWGSGNFYQLGHGNTKSQKTPLKI-NNLSGIEQVSCSRG 272

Query: 211 --YCYLLALACQPSGMAVYSVGCGLGGKLGHGSR------TDEKHPRLIEQFQLLNLQPV 262
             YC+  A +   S   VYS G G  GKLGH +        DE  PR I+  Q   +   
Sbjct: 273 EKYCHTTATS---SDGKVYSWGSGYKGKLGHQNSWSHEDPADESRPRPIQYLQEKGIVIA 329

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC------ESVPKVVQA--LNDVKAI 314
              +G  H+AV+ QDGR+ T+G G  G LGH   E       E  P+ +Q   LN+ K I
Sbjct: 330 KSISGGIHSAVLSQDGRLFTFGCGSDGRLGHIEAEKYVYLYREPFPREIQGPFLNN-KII 388

Query: 315 HVATGDYTTFVVSE 328
              +  Y    ++E
Sbjct: 389 DACSSYYFMAAIAE 402



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 19/142 (13%)

Query: 276 QDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           QDG + TWG    GCL +  E+  E +P  V+     K+  V+TG +    +S   ++Y+
Sbjct: 24  QDGFLYTWGKNSSGCLANQKEDQGEIIPFKVKTNQKFKS--VSTGGFFGAAISSKNELYT 81

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           +G  +++  GH      Q N++  +L PQ + +L+ ++     +S  N   W  H  AL 
Sbjct: 82  WGETKNSRNGH------QANKNY-ILVPQKIMNLQNIS----HVSCGN---W--HCLALN 125

Query: 395 ESGKLYAFGAGDKGQLGIELVN 416
              +LY  G    G  GI  ++
Sbjct: 126 NQNQLYVTGHNKYGACGISGID 147


>gi|219129772|ref|XP_002185055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403550|gb|EEC43502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 727

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 177/409 (43%), Gaps = 63/409 (15%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG-----RTMLISDAGQV 116
           V ++G    GQLGHG   +E  PR +R   G  +RI+Q +AG G      ++L++  G+V
Sbjct: 235 VAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLLLTSTGRV 294

Query: 117 YAFGKDSFGEAEYGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            +FG   +G   +G    K    V  PQ VE L ++ V   A G   +AV++ +G VYT+
Sbjct: 295 LSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTSDGDVYTW 354

Query: 174 SWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
             G   +LGH  +   + P  +  G LE+  V  I+ G  + LA+        V+S G G
Sbjct: 355 GDGFCGQLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVT---EDGEVFSWGLG 411

Query: 233 LGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG-----------QDGRV 280
             G LG   +  D      +  F +    PV  A     A +             +D   
Sbjct: 412 HFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVARIPDNVAPAVDSFPPRDAAA 471

Query: 281 CTWGWGRYGC--------------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
                GR                 L   +++C  +PKV+++L  +  +  + G   + ++
Sbjct: 472 PALLEGRNFAAELMAHLDLIANLSLDDSSDQC--IPKVIESLQGIPMVGASAGHRHSLLL 529

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE------RVVQISL 380
           S++G +YS G G    LGH    D Q   H     P  +T+  +  E      R++Q+S 
Sbjct: 530 SQEGALYSCGAGSGGCLGHG---DTQSQMH-----PVRITAFDEPEEDGSERTRILQMSA 581

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
              I     + A++  G +Y +G  D G++G+ +  NQ     P RV +
Sbjct: 582 GVDI-----SMAVSTRGSVYGWGKTDGGRIGLGMARNQVTL--PRRVSV 623



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 105/203 (51%), Gaps = 23/203 (11%)

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAV 273
           C   G  V + G G  G+LGHG R DE+ PR +       ++ V V+AG       H+ +
Sbjct: 228 CGAGGSGVAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLL 287

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKV-----VQALNDVKAIHVATGDYTTFVVSE 328
           +   GRV ++G G+YG LGHG    + +P V     V+ L  V+   VA G+  + VV+ 
Sbjct: 288 LTSTGRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTS 347

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           DGDVY++G G    LGH   AD +       L P+ VT+    +E V  IS  +      
Sbjct: 348 DGDVYTWGDGFCGQLGH---ADKRPQ-----LAPRQVTAGGLEDEVVASISCGSR----- 394

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           HT A+TE G+++++G G  G LG
Sbjct: 395 HTLAVTEDGEVFSWGLGHFGVLG 417



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 39/327 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-----WRPRPIRSLQGIRIIQAAAGAGRTM 108
           HS+ +TS G V SFG+   G LGHG +  +      RP+ +  L  +R+   AAG   + 
Sbjct: 284 HSLLLTSTGRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSA 343

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           +++  G VY +G    G+  +  +  +L         L++  V   + G+  T  ++ +G
Sbjct: 344 VVTSDGDVYTWGDGFCGQLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVTEDG 403

Query: 169 RVYTFSWGNDARLGHHTEPNDV------------EPHPLLGTLENIPVVQI-----AAGY 211
            V+++  G+   LG    P D             E  P+ G +  IPV +I      A  
Sbjct: 404 EVFSWGLGHFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGAVP-IPVARIPDNVAPAVD 462

Query: 212 CYLLALACQPSGM------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            +    A  P+ +      A       L   L     +D+  P++IE  Q + +  V  +
Sbjct: 463 SFPPRDAAAPALLEGRNFAAELMAHLDLIANLSLDDSSDQCIPKVIESLQGIPM--VGAS 520

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--------VKAIHVA 317
           AG  H+ ++ Q+G + + G G  GCLGHG+ + +  P  + A ++         + + ++
Sbjct: 521 AGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDGSERTRILQMS 580

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLG 344
            G   +  VS  G VY +G  +   +G
Sbjct: 581 AGVDISMAVSTRGSVYGWGKTDGGRIG 607



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 14/156 (8%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP------- 192
           P+++ESL+ I +V A+ G+  + +LS+EG +Y+   G+   LGH    + + P       
Sbjct: 505 PKVIESLQGIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFD 564

Query: 193 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLI 251
            P     E   ++Q++AG    +A++ + S   VY  G   GG++G G +R     PR +
Sbjct: 565 EPEEDGSERTRILQMSAGVDISMAVSTRGS---VYGWGKTDGGRIGLGMARNQVTLPRRV 621

Query: 252 EQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWG 284
             ++  +  PV+   V  G  H+ VVG DG +   G
Sbjct: 622 SVYREEDGSPVLAVDVECGYVHSIVVGLDGTIHMCG 657



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 14/137 (10%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--------QGIRIIQ 99
           A AG  HS+ ++ +G +YS G+ S G LGHG T+ +  P  I +         +  RI+Q
Sbjct: 519 ASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDGSERTRILQ 578

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-----ESLKNIFVVQA 154
            +AG   +M +S  G VY +GK   G    G+   + VT P+ V     E    +  V  
Sbjct: 579 MSAGVDISMAVSTRGSVYGWGKTDGGRIGLGMARNQ-VTLPRRVSVYREEDGSPVLAVDV 637

Query: 155 AIGNFFTAVLSREGRVY 171
             G   + V+  +G ++
Sbjct: 638 ECGYVHSIVVGLDGTIH 654


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 140/310 (45%), Gaps = 20/310 (6%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RP-IRSLQGIRIIQAAA 102
           A  G  H++A+T +G VYS+G  ++G LGHG ++ +  P    RP I S+  I  I  A 
Sbjct: 3   AACGKLHTVALTEEGRVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--AC 59

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T+ +   G ++ +G++ +G+  +G    K    P+ VE+L+    ++AA G   + 
Sbjct: 60  GEFHTLAVGQDGTLWTWGRNQYGQLGHG--DCKTHKLPRRVEALEKKICIKAAAGGQHSL 117

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           VL+   +VY F      +LG  ++        ++  L    V  I  GY + +AL     
Sbjct: 118 VLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALL---K 174

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG---- 278
              +YS G    G+LG G       P  +  F+   +Q +        A V    G    
Sbjct: 175 SEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVP 234

Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
              +V TWG G  G LGH       VPKVVQ L       VA G +++  + E   +Y++
Sbjct: 235 PLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTW 294

Query: 336 GCGESASLGH 345
           GC     LGH
Sbjct: 295 GCSREGQLGH 304



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 14/254 (5%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++AV   G ++++G N  GQLGHG  +    PR + +L+    I+AAAG   ++++
Sbjct: 60  GEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119

Query: 111 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++A +VYAFG + FG  + G++   K   +P +V  L+   V     G   +  L +  +
Sbjct: 120 TEANKVYAFGSNVFG--QLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQ 177

Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA--- 225
           +Y++   +  +LG  H   + V  H  L   +   V QI+ GY + +A   + +G     
Sbjct: 178 LYSWGRNDCGQLGLGHYRSSPVPEH--LTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPP 235

Query: 226 ---VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
              VY+ G G  G+LGH        P++++   LL      VAAG + +A + +  ++ T
Sbjct: 236 LEKVYTWGRGEEGQLGHDELYSRCVPKVVQ--TLLARGIRAVAAGGFSSAAIDEAKQLYT 293

Query: 283 WGWGRYGCLGHGNE 296
           WG  R G LGHG++
Sbjct: 294 WGCSREGQLGHGDD 307



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 16/188 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
           VYS GC   G LGHG+   +  P+ +++  + ++  +  +A G +H   VGQDG + TWG
Sbjct: 19  VYSWGCA-NGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQDGTLWTWG 77

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
             +YG LGHG+ +   +P+ V+AL     I  A G   + V++E   VY+FG      LG
Sbjct: 78  RNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLG 137

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
                    ++      P +V+ L++    V  I+   S     H+ AL +S +LY++G 
Sbjct: 138 LE-------SKVKYSAAPDIVSRLRRSG--VCHITCGYS-----HSMALLKSEQLYSWGR 183

Query: 405 GDKGQLGI 412
            D GQLG+
Sbjct: 184 NDCGQLGL 191



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 29/270 (10%)

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQI 207
           V AA G   T  L+ EGRVY++   N A LGH    + + P     PL+ ++ +I    I
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSI--TTI 57

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + LA+        +++ G    G+LGHG     K PR +E  +      +  AAG
Sbjct: 58  ACGEFHTLAVG---QDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALE--KKICIKAAAG 112

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
             H+ V+ +  +V  +G   +G LG     +  + P +V  L      H+  G   +  +
Sbjct: 113 GQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMAL 172

Query: 327 SEDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
            +   +YS+G   CG+   LGH          + +   P+ +T  K+   + +     ++
Sbjct: 173 LKSEQLYSWGRNDCGQ-LGLGH----------YRSSPVPEHLTMFKKSQVQQISCGYDHN 221

Query: 384 IYWNAHTF--ALTESGKLYAFGAGDKGQLG 411
           I + +      +    K+Y +G G++GQLG
Sbjct: 222 IAFVSEYAGPGVPPLEKVYTWGRGEEGQLG 251



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 45/331 (13%)

Query: 98  IQAAAGAGRTMLISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           + AA G   T+ +++ G+VY++G    + G      Q         L+ S+ +I  +  A
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--A 58

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAG 210
            G F T  + ++G ++T+      +LGH     H  P  VE       LE    ++ AAG
Sbjct: 59  CGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVE------ALEKKICIKAAAG 112

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAW 269
             + L L        VY+ G  + G+LG  S+      P ++ + +   +    +  G  
Sbjct: 113 GQHSLVLT---EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGV--CHITCGYS 167

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 328
           H+  + +  ++ +WG    G LG G+     VP+ +      +   ++ G D+    VSE
Sbjct: 168 HSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227

Query: 329 DG--------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
                      VY++G GE   LGH+ +         +   P++V +L     R V    
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELY--------SRCVPKVVQTLLARGIRAVAAGG 279

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +S        A+ E+ +LY +G   +GQLG
Sbjct: 280 FSSA-------AIDEAKQLYTWGCSREGQLG 303



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 23/157 (14%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-----VVQALNDVKAIHV 316
           V  A G  H   + ++GRV +WG    G LGHGN + + +PK     ++ ++  +  I  
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMPSITTI-- 57

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G++ T  V +DG ++++G  +   LGH     G    H     P+ V +L    E+ +
Sbjct: 58  ACGEFHTLAVGQDGTLWTWGRNQYGQLGH-----GDCKTHK---LPRRVEAL----EKKI 105

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
            I          H+  LTE+ K+YAFG+   GQLG+E
Sbjct: 106 CIKAAAG---GQHSLVLTEANKVYAFGSNVFGQLGLE 139



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 16/213 (7%)

Query: 38  EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIR 96
           EA  ++   +A AG  HS+ +T    VY+FGSN  GQLG     +    P  +  L+   
Sbjct: 99  EALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSG 158

Query: 97  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
           +     G   +M +  + Q+Y++G++  G+   G   +  V  P+ +   K   V Q + 
Sbjct: 159 VCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPV--PEHLTMFKKSQVQQISC 216

Query: 157 GNFFTAVLSRE---------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           G         E          +VYT+  G + +LGH    +   P  ++ TL    +  +
Sbjct: 217 GYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVP-KVVQTLLARGIRAV 275

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           AAG     + A       +Y+ GC   G+LGHG
Sbjct: 276 AAGG---FSSAAIDEAKQLYTWGCSREGQLGHG 305


>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 651

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 31/280 (11%)

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
            G++  LGH     G  NR   V  P+++ +L+ +  R V
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKV 619



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 18/304 (5%)

Query: 38  EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           E  CR   + S+  A P     G +  V+    VY +GSNSS QL  GT E+  +P+   
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           S    + I+  AG   T +IS  G V A GK S+G    G    +        E  ++I 
Sbjct: 401 SFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            V ++ G +  T   + EG V+++  G+  +LGH        P  + G L+   VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           GY +  A+        +Y+ G G  G+LGHG       P L++    +      V+ G+ 
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571

Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   + +DGR V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++ 
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 329 DGDV 332
            G V
Sbjct: 632 TGQV 635



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 26/252 (10%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++S    VY +   +  +L   T+   ++P  L  +  +   ++ A  YC  +      +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPK-LAPSFSDAQTIE-AGQYCTFVI----ST 420

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVC 281
             +V + G G  G+LG G   ++   + +      +++ V  + G+  H      +G V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           +WG G YG LGHGN   +  PK++Q  L     + V+ G   +  V+EDG++Y++G G+ 
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-L 399
             LGH     G  N   N+  P LV  +  V E    +S  +S     HT AL++ G+ +
Sbjct: 541 GRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSKDGRTV 583

Query: 400 YAFGAGDKGQLG 411
           ++FG GD G+LG
Sbjct: 584 WSFGGGDNGKLG 595


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  103 bits (256), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 14/297 (4%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  VT  G ++ FGSN+ GQLG GT     +P  +++L+  R+   A G   T++ 
Sbjct: 44  GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVF 103

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
           +  G +YA G ++  E + G+      TS  LVE   K   +   A G+  +A L+++GR
Sbjct: 104 TSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           +Y     ++ ++G   E N + P  + +G      V  ++ GY +   +       A+Y+
Sbjct: 162 LYMRGDNSEGQIGLGKESNALTPQEVSVGK----RVFWVSCGYYHSAFVTVDG---ALYT 214

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    GKLG  +     H ++ +Q   +  + V VA G  H   + ++  V ++G G++
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQF 272

Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           G LGHG    ES +P+VV+     +  H A G+  T +++++G +Y+FG G    LG
Sbjct: 273 GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 81/251 (32%), Positives = 131/251 (52%), Gaps = 18/251 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 108
           G  H++  TS+G +Y+ G N+ GQLG G   +      +   + QG  I   AAG+  + 
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG-PIKMLAAGSNTSA 154

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++  G++Y  G +S G+   G +   L  +PQ V   K +F V  + G + +A ++ +G
Sbjct: 155 ALTQDGRLYMRGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYHSAFVTVDG 210

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAV 226
            +YTF   +  +LG  TE   +  H +   + +IP  VVQ+A G  + +AL    +   V
Sbjct: 211 ALYTFGEKDSGKLGLSTE--KLANHKVPQQVTDIPDRVVQVACGGGHTVAL----TENEV 264

Query: 227 YSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           YS G G  G+LGHG+   E   PR++E F+   ++    A G  H A++  +G + T+G 
Sbjct: 265 YSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHA--ACGENHTALITDNGLLYTFGD 322

Query: 286 GRYGCLGHGNE 296
           GR+G LG G E
Sbjct: 323 GRHGKLGLGEE 333



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 82/317 (25%), Positives = 145/317 (45%), Gaps = 27/317 (8%)

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           ++ + G   T L+++ G+++ FG +++G+   G + T  V  P  V++L++  V   A G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT--VNKPTCVKALRSERVKLTACG 96

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              T V +  G +Y     N+ +LG     +    H +    +  P+  +AAG     AL
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                   +Y  G    G++G G  ++   P+ +     +  +   V+ G +H+A V  D
Sbjct: 157 T---QDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVD 209

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSF 335
           G + T+G    G LG   E+  +  KV Q + D+  + + VA G   T  ++E+ +VYSF
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSF 267

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G G+   LGH                    + L +V E   +  + ++     HT  +T+
Sbjct: 268 GLGQFGQLGHGTFI--------------FESRLPRVVEHFRKGRVKHAACGENHTALITD 313

Query: 396 SGKLYAFGAGDKGQLGI 412
           +G LY FG G  G+LG+
Sbjct: 314 NGLLYTFGDGRHGKLGL 330



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 15/231 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   S A+T  G +Y  G NS GQ+G G       P+ +    G R+   + G   +  
Sbjct: 148 AGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAF 205

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           ++  G +Y FG+   G  + G+   KL     PQ V  + +  VVQ A G   T  L+ E
Sbjct: 206 VTVDGALYTFGEKDSG--KLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALT-E 261

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
             VY+F  G   +LGH T    +    L   +E+    ++    C     A       +Y
Sbjct: 262 NEVYSFGLGQFGQLGHGTF---IFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 228 SVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           + G G  GKLG G    T++  P L  +F  L+     V  G  H  V+ +
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRF--LDYHVHSVTCGGCHMLVLAK 367



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G GH++A+T +  VYSFG    GQLGHGT   E R PR +   +  R+  AA G  
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            T LI+D G +Y FG    G+   G +       P L     +  V     G     VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366

Query: 166 R 166
           +
Sbjct: 367 K 367



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           +F L N  P+ ++ G  H A+V ++G++  +G   +G LG G +   + P  V+AL   +
Sbjct: 30  KFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSER 89

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
               A G   T V +  G++Y+ G      LG      G  N   +     LV    +  
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL-----GDCNDRTSF---HLVEFFNKQG 141

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
              +  + +N+      + ALT+ G+LY  G   +GQ+G+
Sbjct: 142 PIKMLAAGSNT------SAALTQDGRLYMRGDNSEGQIGL 175



 Score = 45.1 bits (105), Expect = 0.080,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 25/146 (17%)

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           + + G V T+G  ++          ++ P      NDV  + ++ GD  T +V+E+G ++
Sbjct: 9   IPESGAVFTFGKSKFA---------DNAPSKFWLKNDV-PLRISCGDEHTALVTENGKLF 58

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
            FG      LG              V  P  V +L+  +ERV   +   +     HT   
Sbjct: 59  MFGSNNWGQLGLGT--------KTTVNKPTCVKALR--SERVKLTACGRT-----HTLVF 103

Query: 394 TESGKLYAFGAGDKGQLGIELVNNQT 419
           T  G LYA G  ++GQLG+   N++T
Sbjct: 104 TSRGNLYACGGNNEGQLGLGDCNDRT 129


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 27/351 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
           VY++GSNSS QL    +++   P+ ++S    ++++A  G   T  +S  G V + GK S
Sbjct: 286 VYAWGSNSSHQLAELGSDKIVFPKKVKSFGNSQMLEA--GQYCTFAVSGDGCVRSCGKGS 343

Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYTFSWGNDARLG 182
           +G    G    +      + +  + I  + ++ G+   T  L+ EG ++++  G+  +LG
Sbjct: 344 YGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGDGDYGKLG 403

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
           H +      P  + G L    VV ++AGY +    AC      +++ G G  G+LG G  
Sbjct: 404 HGSSLTHKSPKIIEGPLARRIVVCVSAGYRHS---ACVTQEGQLFTWGEGDYGRLGLGDN 460

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESV 301
           T    P L++           V  G+ H  V+ QDG  V ++G G  G LGHG+      
Sbjct: 461 TSRNVPVLVKDIA----SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYR 516

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           PKV++++N +    +  G   +  +++ G V+S+GCG            G G+  A  + 
Sbjct: 517 PKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACL---------GCGSPDATFMK 567

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           P L+  L     RVV I+       + H  ALT + ++Y +G    GQ G+
Sbjct: 568 PTLIDELTFT--RVVDIT-----SGDGHCMALTHNNEVYCWGNNAMGQCGL 611



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 16/281 (5%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AA 101
           R+ S +    GH++A+T++G ++S+G    G+LGHG++     P+ I      RI+   +
Sbjct: 370 RKISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVS 429

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG   +  ++  GQ++ +G+  +G    G   ++ V  P LV+ + +   V    G+  T
Sbjct: 430 AGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNV--PVLVKDIASAGSV--VCGSSHT 485

Query: 162 AVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
            VL+++G  V++F  G++ +LGH        P  ++ ++  +   ++ AG  Y LAL   
Sbjct: 486 LVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPK-VIESINGMMFYKLCAGSQYSLAL--N 542

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
            SG  V+S GCG     G    T  K P LI++     +  V + +G  H   +  +  V
Sbjct: 543 DSGQ-VFSWGCGACLGCGSPDATFMK-PTLIDELTFTRV--VDITSGDGHCMALTHNNEV 598

Query: 281 CTWGWGRYG-C-LGHGNEECESVPKVVQALNDVKAIHVATG 319
             WG    G C LGH N    SVP  VQ LN+V    ++ G
Sbjct: 599 YCWGNNAMGQCGLGHTNSPI-SVPTQVQQLNNVTIHQISAG 638



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%)

Query: 48  AIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            + G  H++ +   G+ V+SFG+  +G+LGHG T   +RP+ I S+ G+   +  AG+  
Sbjct: 478 VVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQY 537

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ ++D+GQV+++G    G              P L++ L    VV    G+     L+ 
Sbjct: 538 SLALNDSGQVFSWG---CGACLGCGSPDATFMKPTLIDELTFTRVVDITSGDGHCMALTH 594

Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
              VY   WGN+A     LGH   P  V     +  L N+ + QI+AG  + +A    PS
Sbjct: 595 NNEVYC--WGNNAMGQCGLGHTNSPISVPTQ--VQQLNNVTIHQISAGTSHSIAYTAMPS 650

Query: 223 GMAVYS 228
              V S
Sbjct: 651 DRHVIS 656


>gi|392423407|ref|YP_006464398.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus acidiphilus SJ4]
 gi|391357873|gb|AFM43571.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus acidiphilus SJ4]
          Length = 1910

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 26/336 (7%)

Query: 35  LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
           LA         S   AG GH++AV S   V+S GSN+ GQLG+ +T     P  +  L  
Sbjct: 323 LAQPVQIDATKSTIAAGSGHTLAVRSDSTVWSAGSNTFGQLGNNSTANSSTPVQVSGLS- 381

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
             I+  +AG   +M +   G V+ +G+ + G+   G       ++P  V  L NI  V  
Sbjct: 382 -SIVGVSAGDSTSMALRSDGIVFVWGRGTEGQLGNGTYSNS--STPVQVPGLSNI--VSI 436

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCY 213
           + G +    L ++G V+ + +G +  LG++T      P      ++N+P +  I AG  +
Sbjct: 437 SCGGYHCMALRKDGAVFVWGYGYNGELGNNTYSCSATPL----QVQNLPKITCIGAGAYH 492

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
            LA+A   +    +S G    G+LG G+ T+   P  ++   + N +   V+ G +H+ +
Sbjct: 493 CLAVAYDGT---CWSWGYNNYGQLGDGTTTNRSIP--VQVIGITNAK--FVSGGMYHSVL 545

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
              DG    WGW  YG LG G+     VP  +   +  ++I VA G Y+T ++  D  VY
Sbjct: 546 QSTDGSFYGWGWNAYGQLGKGDNGDSYVPAGMVGWSG-QSI-VACG-YSTTIIGNDNTVY 602

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
           S G G    LG     +G  N     ++  L+ +L+
Sbjct: 603 STGYGGDGQLG-----NGTNNTSYTFVSTGLINTLR 633


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 48/364 (13%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q   G  H+  +T  G ++++G    G+LGHG  E    PR I +L+GI  +Q A G   
Sbjct: 275 QVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAY 334

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T  ++ +G++Y +G    G    G    +   +P  VE L +  V +   G+  + VL+R
Sbjct: 335 TAAVTASGELYTWGAGENGRLGLGDVADR--HTPSRVEGLHSK-VKEVYAGSVHSCVLTR 391

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-----IPVVQIAAGYCYLLALACQP 221
           EG VY F  G     GH    + ++P  L+ T        +  + +  G  + +AL CQ 
Sbjct: 392 EGTVYAF--GKHEYTGHGDHEDVLDPR-LIPTFSGGSGALVRQISVGPGGYHTMALTCQG 448

Query: 222 SGMAVYSVGCGLGGKLGHGS-----RTDE-----KHPRLIEQFQLLNLQPVVVAAGAWHA 271
               VY+ G     +LG G+     R  E       P+L+E    +N+  V V AG  H+
Sbjct: 449 Q---VYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNI--VKVVAGWGHS 503

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPK------------VVQALNDVKAIHVATG 319
           A +  DG++   G    G LG G+   +  P+            ++  L  +K   +A G
Sbjct: 504 AALTVDGQLYVCGRNYQGQLGLGSP--QGFPQNERGHPFQADFCLIDRLQHLKIKQIACG 561

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
              +  V+E+G+V+SFG G+   LGH +              P+LV +LK     ++ ++
Sbjct: 562 GEHSVAVAENGEVWSFGAGQKGQLGHESTTRED--------FPRLVQALKSTRREIMHVA 613

Query: 380 LTNS 383
             N+
Sbjct: 614 CGNN 617



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 172/383 (44%), Gaps = 31/383 (8%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E  QA+A P     V + GVV     +  G+ G G ++    P  ++ L G+ + Q   G
Sbjct: 224 EAFQALADP--RRVVFAMGVVDDGPHHEVGEGGEGWSDVS--PVVVQGLLGLSVQQVCCG 279

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
                +++D G+++ +G+  FG   +G +  + + SP+ +E+L+ I  VQ A G  +TA 
Sbjct: 280 GQHAAVLTDCGEIFTWGRGGFGRLGHGNR--EGLESPRRIEALEGIPCVQVACGFAYTAA 337

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           ++  G +YT+  G + RLG     +   P  + G   +  V ++ AG  +   L  + + 
Sbjct: 338 VTASGELYTWGAGENGRLGLGDVADRHTPSRVEGL--HSKVKEVYAGSVHSCVLTREGT- 394

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN---LQPVVVAAGAWHAAVVGQDGRV 280
             VY+ G       GHG   D   PRLI  F   +   ++ + V  G +H   +   G+V
Sbjct: 395 --VYAFG--KHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQV 450

Query: 281 CTWGWGRYGCLGHGN-----EECESV-----PKVVQALNDVKAIHVATGDYTTFVVSEDG 330
             WG  R   LG GN        E       P++V++L  +  + V  G   +  ++ DG
Sbjct: 451 YAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDG 510

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
            +Y  G      LG  +      N   +          +  + ++ QI+         H+
Sbjct: 511 QLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGE-----HS 565

Query: 391 FALTESGKLYAFGAGDKGQLGIE 413
            A+ E+G++++FGAG KGQLG E
Sbjct: 566 VAVAENGEVWSFGAGQKGQLGHE 588


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 21/318 (6%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR ++   G ++   A G   + ++  +G+V  +G++ +G+   G Q  +    P  V S
Sbjct: 20  PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQ--EQTEHPTFVGS 77

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L  +  +  + G   T V+S +GRV+++  G + +LGH +  N   P  ++  +    V+
Sbjct: 78  LFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTP-SVVQAMRGRDVL 136

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            +  G  + + +    +G  +Y+ G    G+ G GS +D   P+ +E  +   +Q    +
Sbjct: 137 AVTCGVGHTVIVL---AGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQH--AS 191

Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
            GA H AVV   G V T+G G  G LGHG+ +  S+P+ V AL  +    VA G+  T  
Sbjct: 192 CGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVC 251

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
            + D  V+ FG      LG ++ +      H  +  P+ +  LK   E  V++   N   
Sbjct: 252 AAFDHRVFGFGLNNVGQLGASSTS------HPYLSEPRQMEFLK---EEEVELCKCN--- 299

Query: 386 WNAHTFALTESGKLYAFG 403
             +   ALT  G L A+G
Sbjct: 300 -QSEVIALTRRGALRAWG 316



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            G  H++ V+  G V+S+G  ++GQLGHG+ +    P  +++++G  ++    G G T++
Sbjct: 88  CGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVI 147

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G++Y  G +  G+   GV  T  + SPQ VESL+   V  A+ G   TAV++  G 
Sbjct: 148 VLAGGELYTCGWNKNGQC--GVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGE 205

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+TF  G+  +LG H +  D+     +G L  I +  +A G  Y +   C      V+  
Sbjct: 206 VFTFGSGSCGQLG-HGDCQDLSMPRRVGALVGIVMSMVACGEEYTV---CAAFDHRVFGF 261

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           G    G+LG  S +   HP L E  Q+  L+
Sbjct: 262 GLNNVGQLGASSTS---HPYLSEPRQMEFLK 289



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
           G+ G G++   +HP  +    L  +  + V+ G  H  VV +DGRV +WG G  G LGHG
Sbjct: 59  GQCGTGTQEQTEHPTFVGS--LFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG 116

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           + +  + P VVQA+     + V  G   T +V   G++Y+ G  ++   G  + +D    
Sbjct: 117 SRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSD---- 172

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
               +L+PQ V SL+   E V   S         HT  +T  G+++ FG+G  GQLG
Sbjct: 173 ----LLSPQCVESLR--GEGVQHASCG-----AGHTAVVTGGGEVFTFGSGSCGQLG 218



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 8/250 (3%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R+      G  HS  V   G V  +G N  GQ G GT E+   P  + SL G+  +  + 
Sbjct: 29  RQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSC 88

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T+++S+ G+V+++G  + G+  +G +    +T+P +V++++   V+    G   T 
Sbjct: 89  GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDN--LTTPSVVQAMRGRDVLAVTCGVGHTV 146

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++   G +YT  W  + + G  +  + + P      +E++    +    C     A    
Sbjct: 147 IVLAGGELYTCGWNKNGQCGVGSTSDLLSPQ----CVESLRGEGVQHASCGAGHTAVVTG 202

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
           G  V++ G G  G+LGHG   D   PR +    L+ +   +VA G  +      D RV  
Sbjct: 203 GGEVFTFGSGSCGQLGHGDCQDLSMPRRVG--ALVGIVMSMVACGEEYTVCAAFDHRVFG 260

Query: 283 WGWGRYGCLG 292
           +G    G LG
Sbjct: 261 FGLNNVGQLG 270



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G +     PR++++   +  Q   VA G  H+A+V   G V  WG  +YG  G G +E  
Sbjct: 12  GEQVSSSTPRMLKK--AMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQT 69

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
             P  V +L  V  + V+ G   T VVSEDG V+S+G G +  LGH       G+R  N+
Sbjct: 70  EHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGH-------GSRD-NL 121

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            TP +V +++  +   V   +        HT  +   G+LY  G    GQ G+
Sbjct: 122 TTPSVVQAMRGRDVLAVTCGV-------GHTVIVLAGGELYTCGWNKNGQCGV 167



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 23/275 (8%)

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 196
           ++P++++      V   A G   +A++   G V    WG +      T   +   HP  +
Sbjct: 18  STPRMLKKAMGRQVRDVACGLVHSAMVMGSGEV--LCWGENKYGQCGTGTQEQTEHPTFV 75

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
           G+L  +  + ++ G  + + ++       V+S G G  G+LGHGSR +   P +++  + 
Sbjct: 76  GSLFGVACMSVSCGGAHTVVVS---EDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRG 132

Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
            ++  + V  G  H  +V   G + T GW + G  G G+      P+ V++L      H 
Sbjct: 133 RDV--LAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHA 190

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           + G   T VV+  G+V++FG G    LGH    D        +  P+ V +L       V
Sbjct: 191 SCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQD--------LSMPRRVGAL-------V 235

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            I ++       +T       +++ FG  + GQLG
Sbjct: 236 GIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLG 270



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
            A  G GH+  VT  G V++FGS S GQLGHG  ++   PR + +L GI +   A G   
Sbjct: 189 HASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEY 248

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           T+  +   +V+ FG ++ G+          ++ P+ +E LK   V            L+R
Sbjct: 249 TVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTR 308

Query: 167 EGRVYTFSWG 176
            G +   +WG
Sbjct: 309 RGALR--AWG 316


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 32/364 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GH +A+ S G V+++G N+SGQLG GT    W PR +  L G  ++  AAG+  ++ 
Sbjct: 407 AGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWVPRQVPELSG--VVAVAAGSSFSLA 464

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+++G +++G+  +G   T   + P  V  L  +  V A  G+     +  +G 
Sbjct: 465 VRYDGSVWSWGDNAYGQLGHG--STDASSVPLHVRELSEVVAVAA--GSMHALAVRADGT 520

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + + +  +LG   E      +  +       +V +AA + + LA+    +   V++ 
Sbjct: 521 VWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGT---VWAW 577

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G     +LG G+ T    P  +     + L    ++AG  ++  +  DG +  WG    G
Sbjct: 578 GNNTDSELGDGTTTRRLVPLRVNAPGTVAL----LSAGYNYSMAMRADGSLWAWGTNFAG 633

Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
            LG G+    +VP  VQ    V+A  +A G   +  V  DG ++++G      LG     
Sbjct: 634 QLGDGSTTSRAVPVRVQG--PVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLG----- 686

Query: 350 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 409
           DG    HA    P  V  +  V    V ++L         + A+   G L+A+G  D GQ
Sbjct: 687 DGTLTHHA---LPVRVPGMSGVVAVDVTLNL---------SLAVRSDGSLWAWGNNDVGQ 734

Query: 410 LGIE 413
           LG +
Sbjct: 735 LGTQ 738



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 37/360 (10%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV   G V++ G N  GQLG GTT     P  ++ L G+  +  AAG G ++ +   
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAAV--AAGHGHSLALRYD 116

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G +++G+     +  + V  P  V  L  +  V A  G+  +  +  +G V+ +
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTV--PVQVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172

Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                 +LG  T  +   P  + G      VV +AAG  + LA+    S   V++ G   
Sbjct: 173 GRNTSGQLGDGTRDDRAVPVQVTGLSG---VVSVAAGGNHSLAVRSDGS---VWAWGNNA 226

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
            G+LG         P  +E    +    V VAAG +H+  V  DG V  WG   YG LG 
Sbjct: 227 SGQLGGAPEAAYPVPWRVEDVSGV----VAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGD 282

Query: 294 GNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G  E  S  +PK V  L  V A  V+ G Y + VV  DG V+++G      LG       
Sbjct: 283 GKLEGNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLG------- 333

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            G   A+  +P  V  +       V ++         H+  +   G L+A+G+   GQ G
Sbjct: 334 -GGSRAHAASPVQVLGVSG----AVAVAAGYR-----HSLVVNSDGTLWAWGSNLDGQRG 383



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 170/376 (45%), Gaps = 59/376 (15%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
           +AG  HS+AV S G V+++G N+SGQLG GT ++   P  +  L G+  +  AAG   ++
Sbjct: 154 VAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVPVQVTGLSGV--VSVAAGGNHSL 211

Query: 109 LISDAGQVYAFGKDSFG------EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
            +   G V+A+G ++ G      EA Y V        P  VE +  +  V A  G + + 
Sbjct: 212 AVRSDGSVWAWGNNASGQLGGAPEAAYPV--------PWRVEDVSGVVAVAA--GQYHSL 261

Query: 163 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLA 216
            +  +G V+  +WG++   +LG      +    P     + +P    VV ++AG+ + L 
Sbjct: 262 AVRYDGTVW--AWGDNLYGQLGDGKLEGNSRWLP-----KQVPGLGGVVAVSAGFYHSLV 314

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVG 275
           +    +   V++ G    G+LG GSR     P      Q+L +   V VAAG  H+ VV 
Sbjct: 315 VRSDGT---VWAWGNNAYGQLGGGSRAHAASP-----VQVLGVSGAVAVAAGYRHSLVVN 366

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            DG +  WG    G  G G       P  V  L+ V  + VA G      +  DG V+++
Sbjct: 367 SDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSGV--VSVAAGGGHVLALLSDGTVWAW 424

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G   S  L       G G RH+    P+ V  L      VV ++  +S      + A+  
Sbjct: 425 GDNASGQL-------GDGTRHSR-WVPRQVPELSG----VVAVAAGSSF-----SLAVRY 467

Query: 396 SGKLYAFGAGDKGQLG 411
            G ++++G    GQLG
Sbjct: 468 DGSVWSWGDNAYGQLG 483



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 163/366 (44%), Gaps = 40/366 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+ V S G ++++GSN  GQ G GT      P  +  L G  ++  AAG G  + 
Sbjct: 357 AGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLA 414

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+   G + ++ V  P+ V  L  +  V A  G+ F+  +  +G 
Sbjct: 415 LLSDGTVWAWGDNASGQLGDGTRHSRWV--PRQVPELSGVVAVAA--GSSFSLAVRYDGS 470

Query: 170 VYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           V+  SWG++A  +LGH  T+ + V  H      E   VV +AAG  + LA+    +   V
Sbjct: 471 VW--SWGDNAYGQLGHGSTDASSVPLH----VRELSEVVAVAAGSMHALAVRADGT---V 521

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
           +  G    G+LG G   +    R     Q+  L  +V VAA   H+  V  DG V  WG 
Sbjct: 522 WGWGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGN 579

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
                LG G      VP  V A   V  +  + G   +  +  DG ++++G   +  LG 
Sbjct: 580 NTDSELGDGTTTRRLVPLRVNAPGTVALL--SAGYNYSMAMRADGSLWAWGTNFAGQLGD 637

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
            +             T + V    Q   R   ++   S     H+ A+   G L+A+G  
Sbjct: 638 GST------------TSRAVPVRVQGPVRASTLAAGQS-----HSMAVGSDGFLWAWGFN 680

Query: 406 DKGQLG 411
            +GQLG
Sbjct: 681 FEGQLG 686



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           S   AG  HS+AV S G ++++G N  GQLG GT      P  +  + G+  +       
Sbjct: 656 STLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVTLNL- 714

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
            ++ +   G ++A+G +  G  + G Q +  VT+
Sbjct: 715 -SLAVRSDGSLWAWGNNDVG--QLGTQPSTYVTT 745


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG         P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   + 
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
               S   G     G         P  I   +  NL  + ++ G  H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           G    G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ V+ I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313

Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
            G        + E  +    +  ++ A  L DV+  H+  G Y  FV +
Sbjct: 314 HGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +     
Sbjct: 6   GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  + AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            I+++ GD  T V+ +DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R     +    E  P         ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + LN+   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LN +K I V+ G Y +  +S+D  V+S+G      LG       
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q        +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNP 424
           +   N   +   P
Sbjct: 215 LSGRNVPVQSNKP 227



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG    P    P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE--- 246

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             HT  L + GK++ FG    GQLG      +      ER+D
Sbjct: 247 --HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T ++   G+V+ FG +S G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H E
Sbjct: 301 AYVHTTGQVISFGHGPSDTSKPTHPE 326


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 16/289 (5%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
           ++  G+N  G LG G  +    PR + SL G +I   + G+G   +L +  G+V+ +G +
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           ++ +   G     LV    +  +L N  V + A G++ + VL+ +G V+ + + N  ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
             +  N   P  + G L+N   V IA G   + ++A   +G  VY  G    G+LG GS 
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 242

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
            ++  P  I   Q + +Q V  A G  H  V+  +G+V  WG   YG LG GN+  +S P
Sbjct: 243 GNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
             V    D    + A H A   +T+   ++ G VY +G C G+S  L H
Sbjct: 301 APVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 346



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 5/168 (2%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
           ++ ++   G  HS+ +TS G V+++G N+SGQ+G G+T  +  PR +   LQ    +  A
Sbjct: 152 KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIA 211

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   +M + + G+VY +G +  G+   G  G +   +P  + +L+ I V + A G   T
Sbjct: 212 CGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAHT 269

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
            VL+ EG+VY +   +  +LG   + N   P P++  +E   +++IAA
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVI--VEKDRIIEIAA 315



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV + G VY +G N +GQLG G++  +  P  I +LQGIR+ + A G   T++++D G
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           QVYA+G +S+G+   G +  +   +P +VE    I  + A      +A  ++ G VY   
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPAPVIVEK-DRIIEIAACHSAHTSAAKTQGGHVYM-- 333

Query: 175 WG 176
           WG
Sbjct: 334 WG 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G +G G+   + +P +V   L +  A+++A G   +  V   G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             +     GN+     TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 405 GDKGQLGIELVNNQT 419
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 155/328 (47%), Gaps = 38/328 (11%)

Query: 98   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            I  A G     L++  G+V+ +G+++ G   +G+Q    V+ P+LVE L    +   A G
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVD--VSRPKLVEFLALTNIDFVACG 1141

Query: 158  NFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
             + T  +S  G ++T  WG    N   LGH ++ +   P  + G +E + V+ +A G  +
Sbjct: 1142 EYHTCAVSTSGDLFT--WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG-TW 1198

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA- 272
              ALA   +   +++ G G  G LGHG R    +P+ ++   L  L+ + VA G WH   
Sbjct: 1199 HSALAT--ANGKLFTFGDGAFGVLGHGDRESVSYPKEVKM--LSGLKTMKVACGVWHTVA 1254

Query: 273  ---VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
               V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D     +A G   T
Sbjct: 1255 IVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLT 1314

Query: 324  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
              ++  G V++ G      LG ++ +DG+         P LV   + V E V +IS  + 
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLG-SSNSDGK--------LPCLVQD-RLVGEFVEEISCGDH 1364

Query: 384  IYWNAHTFALTESGKLYAFGAGDKGQLG 411
                 H   LT   +++ +G G  G+LG
Sbjct: 1365 -----HVAVLTSRSEVFTWGKGSNGRLG 1387



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 149/282 (52%), Gaps = 23/282 (8%)

Query: 51   GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
            G  H+ AV++ G ++++G   ++ G LGHG+    W P+ +   ++G++++  A G   +
Sbjct: 1141 GEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHS 1200

Query: 108  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
             L +  G+++ FG  +FG   +G + +  V+ P+ V+ L  +  ++ A G + T     V
Sbjct: 1201 ALATANGKLFTFGDGAFGVLGHGDRES--VSYPKEVKMLSGLKTMKVACGVWHTVAIVEV 1258

Query: 164  LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
            +++ G      +++T+  G+  RLGH  +   + P   + +L +    QIA G+   +AL
Sbjct: 1259 MNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFQQIACGHTLTVAL 1317

Query: 218  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                SG  V+++G    G+LG  S +D K P L+ Q +L+      ++ G  H AV+   
Sbjct: 1318 TT--SGH-VFTMGGTSHGQLG-SSNSDGKLPCLV-QDRLVGEFVEEISCGDHHVAVLTSR 1372

Query: 278  GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVA 317
              V TWG G  G LGHG++E    P +V+AL +  VK+I  A
Sbjct: 1373 SEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 37/351 (10%)

Query: 37   GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
            G   CR        G  H   VT +G V+++G  + G+LGHG   +  RP+ +  L    
Sbjct: 1075 GTVNCRTVKIDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTN 1134

Query: 97   IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLK 147
            I   A G   T  +S +G ++ +G    G    G+ G          K V+ P  VE L+
Sbjct: 1135 IDFVACGEYHTCAVSTSGDLFTWGD---GIHNVGLLGHGSDLSHWIPKRVSGP--VEGLQ 1189

Query: 148  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
               V+  A G + +A+ +  G+++TF  G    LGH    +   P  +   L  +  +++
Sbjct: 1190 ---VLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEV-KMLSGLKTMKV 1245

Query: 208  AAGYCYLLALA-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
            A G  + +A+           S   +++ G G   +LGHG++     P  +      N Q
Sbjct: 1246 ACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQ 1305

Query: 261  PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATG 319
             +  A G      +   G V T G   +G LG  N + + +P +VQ  L       ++ G
Sbjct: 1306 QI--ACGHTLTVALTTSGHVFTMGGTSHGQLGSSNSDGK-LPCLVQDRLVGEFVEEISCG 1362

Query: 320  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
            D+   V++   +V+++G G +  LGH    D +        TP LV +LK+
Sbjct: 1363 DHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRK--------TPTLVEALKE 1405


>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
 gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
 gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
          Length = 513

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 160/369 (43%), Gaps = 59/369 (15%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T +G ++S+G N  GQLGHG  +    P+ I SL+G   + AA G   T+ +++ 
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G VYAFG++  G+   G +   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI--TKVACGAEFSMIMDCKGNLYSF 269

Query: 174 SWGNDARLGHH-----------------------------TEPNDVEPHPLLGTLENIPV 204
                 +LGH+                             T+   + P P      N+ V
Sbjct: 270 GCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVP------NVVV 323

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             IA G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         +
Sbjct: 324 RDIACGINHSLILDSQKR---VFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQI 380

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            AGA  +  V + G +  WG        + + +    PK VQ L   K   +A G  ++ 
Sbjct: 381 YAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSI 433

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           +V+ D    S+  G S + G     D   N+  +  T Q V +L  +    V       I
Sbjct: 434 IVAADESTISW--GPSPTFGELGYGD---NKAKSSTTAQEVKTLDGIYSDQV-------I 481

Query: 385 YWNAHTFAL 393
             N+HT  +
Sbjct: 482 MGNSHTLVV 490



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 36/281 (12%)

Query: 84  WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           W P     L G+++   A+G  A  ++LI+  G+++++G++  G+  +G    K +  P+
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG--DIKRIDVPK 185

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           L+ESLK    V AA G   T  L+  G VY F      +LG   +  D  P P       
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
            P+ ++A G  + + + C+ +   +YS GC   G+LGH S  D K+              
Sbjct: 245 QPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNS--DGKYIARAQRIEYDCELI 299

Query: 248 PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            R I  F       Q+L +  VVV   A G  H+ ++    RV +WG+G YG LGH  + 
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQR 359

Query: 298 CESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
            E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 360 DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 46/313 (14%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
            A  G  H++A+T  G VY+FG N  GQLG G   +   P P + L  G  I + A GA 
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAE 255

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------------------- 144
            +M++   G +Y+FG   +G+  +   G K +   Q +E                     
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDG-KYIARAQRIEYDCELIARRIAIFIEKTKDGQ 314

Query: 145 --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
              + N+ V   A G   + +L  + RV+++ +G   RLGH  + +++ P   L  L + 
Sbjct: 315 ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR--LVKLFDF 372

Query: 203 P---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           P     QI AG     A++ +  G+  +           + SR    +P+ ++   L   
Sbjct: 373 PGRGAAQIYAGATCSFAVS-EMGGLFFWGA--------TNTSRDSTMYPKAVQ--DLCGW 421

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHV 316
           +   +A G   + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  V
Sbjct: 422 KVRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQV 480

Query: 317 ATGDYTTFVVSED 329
             G+  T VV+ D
Sbjct: 481 IMGNSHTLVVARD 493



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  +A+G C   +L     G  ++S G    G+LGHG       P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E  +      V  A G  H   + ++G V  +G  + G LG GN+  ++VP   Q L + 
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244

Query: 312 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 366
           + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L  + + 
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304

Query: 367 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
              +  +    + + N +  +      H+  L    +++++G G  G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++   +  +LGH  +   ++   L+ +L+    V  A G  + LAL    S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              VY+ G    G+LG G++TD    P  I    L N QP+  VA GA  + ++   G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE + + +              + +V    +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   + ++     V+S+G G    LGH+   D         + P+LV           
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
           WG  RYGCL                   V+   VA+G     + +++ +G ++S+G  + 
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH  I          +  P+L+ SLK   E  V  +   +     HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215

Query: 401 AFGAGDKGQLGI 412
           AFG    GQLG+
Sbjct: 216 AFGENKMGQLGL 227



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q  AG   S AV+  G ++ +G+ ++      + +    P+
Sbjct: 365 RLVKLFDFPG-----RGAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPK 413

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G ++   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 414 AVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLD 473

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            I+  Q  +GN  T V++R+
Sbjct: 474 GIYSDQVIMGNSHTLVVARD 493


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 41/366 (11%)

Query: 72  SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
           +G   + TTE+   P+ + S   +     A G    +L++  G+++++G+   G+  +G+
Sbjct: 264 TGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 323

Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 187
           +    V  P+ + S++ +     A G+F T  +++ G +Y  SWG+       LGH  E 
Sbjct: 324 ETD--VQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 379

Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
           +   P  + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R     
Sbjct: 380 SCWIPKRVTGALQGLYVSYVACGPWHTAVVA---SSGQLFTFGDGSFGALGHGDRRSTSV 436

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 294
           PR ++   L  L    VA G WH A +                G+V TWG G  G LGHG
Sbjct: 437 PREVKI--LSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHG 494

Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           + + + +P+ V +L++     VA G   T  ++  G VY+ G      LG+      +GN
Sbjct: 495 DNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGN---PTAKGN 551

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
             A            +V   +V+ S+      + H   LT   ++Y +G G  GQLG   
Sbjct: 552 FPA------------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGT 599

Query: 415 VNNQTE 420
           + N+ E
Sbjct: 600 IENKRE 605



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 24/292 (8%)

Query: 51  GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
           G  H+ A+T  G +YS+G  +++   LGHG     W P+ +  +LQG+ +   A G   T
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHT 406

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
            +++ +GQ++ FG  SFG   +G + +  V  P+ V+ L  + V + A G + TA L   
Sbjct: 407 AVVASSGQLFTFGDGSFGALGHGDRRSTSV--PREVKILSGLIVTKVACGVWHTAALVEV 464

Query: 165 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
                     S  G+V+T+  G   +LGH      + P  ++ +L N  + Q+A G+   
Sbjct: 465 TNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVI-SLSNENICQVACGHSLT 523

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           ++L    S   VY++G    G+LG+ +       R+  +  ++      +A G++H AV+
Sbjct: 524 VSLT---STGHVYTMGSTAYGQLGNPTAKGNFPARV--EGDIVEASVEEIACGSYHVAVL 578

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
                + TWG G  G LGHG  E +  P VV  L + +   +  G   T V+
Sbjct: 579 TSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVI 630



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 37/312 (11%)

Query: 134 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
           T+ V  P+ +ES   +     A G     +++++G ++++  G   +LGH  E  DV+  
Sbjct: 272 TEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLE-TDVQQP 330

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
             + ++  +    +A G  +  A+  Q   +  +  G      LGHG+ +    P+ +  
Sbjct: 331 KFISSVRGLGFKSLACGDFHTCAIT-QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG 389

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
             L  L    VA G WH AVV   G++ T+G G +G LGHG+    SVP+ V+ L+ +  
Sbjct: 390 -ALQGLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIV 448

Query: 314 IHVATGDYTTFVV-------------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
             VA G + T  +             S  G V+++G GE   LGH       G+  A +L
Sbjct: 449 TKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGH-------GDNDAQLL 501

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
            P+ V SL   NE + Q++  +S+     T +LT +G +Y  G+   GQLG     N T 
Sbjct: 502 -PECVISLS--NENICQVACGHSL-----TVSLTSTGHVYTMGSTAYGQLG-----NPTA 548

Query: 421 RGN-PERVDIDL 431
           +GN P RV+ D+
Sbjct: 549 KGNFPARVEGDI 560



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           G G  L + +  D   P+ +E   +L+ Q   +A G  HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDVLLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           GHG E     PK + ++  +    +A GD+ T  +++ GD+YS+G G      HN    G
Sbjct: 320 GHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGT-----HNVDLLG 374

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            GN  ++   P+ VT   Q     + +S      W  HT  +  SG+L+ FG G  G LG
Sbjct: 375 HGN-ESSCWIPKRVTGALQ----GLYVSYVACGPW--HTAVVASSGQLFTFGDGSFGALG 427


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 16/288 (5%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 113
           +I VT    V++ G+N SG LG G  +    PR I +L G +I+  + G G  + I+ A 
Sbjct: 34  AIYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATAD 93

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 172
           G+V+++G + + +   G     L  +P LV + L    V++ A G+  T  L+ +G V+ 
Sbjct: 94  GEVFSWGHNGYSQLGNGTTNHGL--TPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFA 151

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           + + N  ++G  +  N   P  +   L+N  VV IA G   L ++A   SG  +Y  G  
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACG--QLCSMAVLDSG-EIYGWGYN 208

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG G+  +++ P  I   Q +++  + VA G  H   +  +G V  WG   YG LG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQGVSV--IQVACGYAHTLALTDEGFVYAWGANSYGQLG 266

Query: 293 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
            GN+  +++P ++    + + +V A H +   +T+   ++ G V  +G
Sbjct: 267 TGNKCNQALPTLINTDKERMAEVAACHTS---HTSAAKTQSGQVLMWG 311



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 10/253 (3%)

Query: 38  EACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGI 95
           +A C ++      G G  +A+ T+ G V+S+G N   QLG+GTT     P  + + L G 
Sbjct: 69  DALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGK 128

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQA 154
           R+I+ A G+  T+ ++  G+V+A+G ++ G+   G    +   +P+ V S L+N  VV  
Sbjct: 129 RVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKAVVNI 186

Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
           A G   +  +   G +Y + +  + +LG     N   P   +  L+ + V+Q+A GY + 
Sbjct: 187 ACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVSVIQVACGYAHT 245

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
           LAL     G  VY+ G    G+LG G++ ++  P LI   +   +  V     +  +A  
Sbjct: 246 LALT--DEGF-VYAWGANSYGQLGTGNKCNQALPTLINTDK-ERMAEVAACHTSHTSAAK 301

Query: 275 GQDGRVCTWGWGR 287
            Q G+V  WG  R
Sbjct: 302 TQSGQVLMWGQCR 314



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 152/321 (47%), Gaps = 27/321 (8%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P  +R ++   +  +AA     + ++D  +V+A G +  G    G+   +    P+ +++
Sbjct: 15  PEELRLIRQACVFGSAANEAIYVTVND--EVFALGTNCSGC--LGLGDLQSTIEPRRIDA 70

Query: 146 LKNIFVVQAAIGN-FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
           L    +V  + G     A+ + +G V  FSWG++  ++LG+ T  + + P  +   L   
Sbjct: 71  LCGKKIVSLSYGTGPHVAIATADGEV--FSWGHNGYSQLGNGTTNHGLTPALVSTNLLGK 128

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
            V+++A G  + +AL    +   V++ G    G++G GS  ++  PR +    L N   V
Sbjct: 129 RVIEVACGSHHTIALT---TDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKAVV 184

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +A G   +  V   G +  WG+   G LG GN   +  P  + AL  V  I VA G   
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAH 244

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           T  ++++G VY++G      L       G GN+  N   P L+ + K   ER+ +++  +
Sbjct: 245 TLALTDEGFVYAWGANSYGQL-------GTGNK-CNQALPTLINTDK---ERMAEVAACH 293

Query: 383 SIYWNAHTFALTESGKLYAFG 403
           + + +A   A T+SG++  +G
Sbjct: 294 TSHTSA---AKTQSGQVLMWG 311



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 24/208 (11%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G     +LG+G+      P L+    LL  + + VA G+ H   +  DG V  WG+
Sbjct: 96  VFSWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAWGY 154

Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 342
              G +G G+   +  P+ V + L +   +++A G   +  V + G++Y +G  C     
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLG 214

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LG+N      GN+     TP  + +L+ V+  V+Q++        AHT ALT+ G +YA+
Sbjct: 215 LGNN------GNQQ----TPCRIAALQGVS--VIQVACGY-----AHTLALTDEGFVYAW 257

Query: 403 GAGDKGQLGIELVNNQTERGNPERVDID 430
           GA   GQLG     N+  +  P  ++ D
Sbjct: 258 GANSYGQLG---TGNKCNQALPTLINTD 282



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S+AV   G +Y +G N +GQLG G    +  P  I +LQG+ +IQ A G   T+ ++D G
Sbjct: 193 SMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEG 252

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTF 173
            VYA+G +S+G+   G +  + +  P L+ + K      AA     T A  ++ G+V   
Sbjct: 253 FVYAWGANSYGQLGTGNKCNQAL--PTLINTDKERMAEVAACHTSHTSAAKTQSGQV--L 308

Query: 174 SWGN-------DARLGHHTEPNDV 190
            WG           L H +  +DV
Sbjct: 309 MWGQCRGQAVASPHLTHFSSTDDV 332


>gi|388497640|gb|AFK36886.1| unknown [Lotus japonicus]
          Length = 69

 Score =  102 bits (255), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 57/67 (85%), Gaps = 1/67 (1%)

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF-TAVLSR 166
           MLISD+GQVYAFGKDSFG+AEYGVQG+K V SPQLVESLKNIFVVQAAIGNFF +  + R
Sbjct: 1   MLISDSGQVYAFGKDSFGDAEYGVQGSKTVISPQLVESLKNIFVVQAAIGNFFHSCTVKR 60

Query: 167 EGRVYTF 173
              +Y F
Sbjct: 61  RQGLYIF 67


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG         P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   + 
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
               S   G     G         P  I   +  NL  + ++ G  H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           G    G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ V+ I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313

Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
            G        + E  +    +  ++ A  L DV+  H+  G Y  FV +
Sbjct: 314 HGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +     
Sbjct: 6   GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  + AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            I+++ GD  T V+ +DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R     +    E  P         ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + LN+   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LN +K I V+ G Y +  +S+D  V+S+G      LG       
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q        +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNP 424
           +   N   +   P
Sbjct: 215 LSGRNVPVQSNKP 227



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG    P    P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE--- 246

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             HT  L + GK++ FG    GQLG      +      ER+D
Sbjct: 247 --HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T ++   G+V+ FG +S G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H E
Sbjct: 301 AYVHTTGQVISFGHGPSDTSKPTHPE 326


>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
          Length = 427

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTET 125

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKTVQDLCGWRIRSLACGK-SSIIVAADE 353

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  V    V +  ++S+
Sbjct: 354 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGVFTEQVAMGYSHSL 402



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIR 338

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ V    VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVA 395

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 396 MGYSHSLVIARD 407



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHETIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGS 127

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 279 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 327

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 328 TVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 387

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            +F  Q A+G   + V++R+
Sbjct: 388 GVFTEQVAMGYSHSLVIARD 407



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HETIVSAACGRN-----HTLALTETGSVFAF 131

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG         P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   + 
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
               S   G     G         P  I   +  NL  + ++ G  H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           G    G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 39/298 (13%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ V+ I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313

Query: 285 WGRYGCLGHGNEECESVPKVVQALN---------------DVKAIHVATGDYTTFVVS 327
                   HG  + +S P   +AL                DV+  H+  G Y  FV +
Sbjct: 314 --------HGPSD-KSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R     +    E  P         ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + LN+   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LN +K I V+ G Y +  +S+D  V+S+G      LG       
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q        +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNP 424
           +   N   +   P
Sbjct: 215 LSGRNVPVQSNKP 227



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +     
Sbjct: 6   GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  + AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            I+++ GD  T V+ +DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG    P    P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE--- 246

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             HT  L + GK++ FG    GQLG      +      ER+D
Sbjct: 247 --HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T ++   G+V+ FG +S G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYVHTTGQVISFGHG 315


>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
          Length = 497

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 160/369 (43%), Gaps = 59/369 (15%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T +G ++S+G N  GQLGHG  +    P+ I SL+G   + AA G   T+ +++ 
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G VYAFG++  G+   G +   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI--TKVACGAEFSMIMDCKGNLYSF 269

Query: 174 SWGNDARLGHH-----------------------------TEPNDVEPHPLLGTLENIPV 204
                 +LGH+                             T+   + P P      N+ V
Sbjct: 270 GCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVP------NVVV 323

Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
             IA G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         +
Sbjct: 324 RDIACGINHSLILDSQKR---VFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQI 380

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
            AGA  +  V + G +  WG        + + +    PK VQ L   K   +A G  ++ 
Sbjct: 381 YAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSI 433

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           +V+ D    S+  G S + G     D   N+  +  T Q V +L  +           +I
Sbjct: 434 IVAADESTISW--GPSPTFGELGYGD---NKAKSSTTAQEVKTLDGIYS-------DQAI 481

Query: 385 YWNAHTFAL 393
             N+HT  +
Sbjct: 482 MGNSHTLVV 490



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 36/281 (12%)

Query: 84  WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           W P     L G+++   A+G  A  ++LI+  G+++++G++  G+  +G    K +  P+
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG--DIKRIDVPK 185

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           L+ESLK    V AA G   T  L+  G VY F      +LG   +  D  P P       
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
            P+ ++A G  + + + C+ +   +YS GC   G+LGH S  D K+              
Sbjct: 245 QPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNS--DGKYIARAQRIEYDCELI 299

Query: 248 PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
            R I  F       Q+L +  VVV   A G  H+ ++    RV +WG+G YG LGH  + 
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQR 359

Query: 298 CESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
            E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 360 DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 46/313 (14%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
            A  G  H++A+T  G VY+FG N  GQLG G   +   P P + L  G  I + A GA 
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAE 255

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------------------- 144
            +M++   G +Y+FG   +G+  +   G K +   Q +E                     
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDG-KYIARAQRIEYDCELIARRIAIFIEKTKDGQ 314

Query: 145 --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
              + N+ V   A G   + +L  + RV+++ +G   RLGH  + +++ P   L  L + 
Sbjct: 315 ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR--LVKLFDF 372

Query: 203 P---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           P     QI AG     A++ +  G+  +           + SR    +P+ ++   L   
Sbjct: 373 PGRGAAQIYAGATCSFAVS-EMGGLFFWGA--------TNTSRDSTMYPKAVQ--DLCGW 421

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHV 316
           +   +A G   + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +   
Sbjct: 422 KVRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQA 480

Query: 317 ATGDYTTFVVSED 329
             G+  T VV+ D
Sbjct: 481 IMGNSHTLVVARD 493



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  +A+G C   +L     G  ++S G    G+LGHG       P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
           E  +      V  A G  H   + ++G V  +G  + G LG GN+  ++VP   Q L + 
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244

Query: 312 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 366
           + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L  + + 
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304

Query: 367 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
              +  +    + + N +  +      H+  L    +++++G G  G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++   +  +LGH  +   ++   L+ +L+    V  A G  + LAL    S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              VY+ G    G+LG G++TD    P  I    L N QP+  VA GA  + ++   G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE + + +              + +V    +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   + ++     V+S+G G    LGH+   D         + P+LV           
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
           WG  RYGCL                   V+   VA+G     + +++ +G ++S+G  + 
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH  I          +  P+L+ SLK   E  V  +   +     HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215

Query: 401 AFGAGDKGQLGI 412
           AFG    GQLG+
Sbjct: 216 AFGENKMGQLGL 227



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q  AG   S AV+  G ++ +G+ ++      + +    P+
Sbjct: 365 RLVKLFDFPG-----RGAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPK 413

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G ++   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 414 AVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLD 473

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            I+  QA +GN  T V++R+
Sbjct: 474 GIYSDQAIMGNSHTLVVARD 493


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 163/368 (44%), Gaps = 34/368 (9%)

Query: 47  QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGA 104
            AIA  G H+ A+ S G V+ +G N+SGQLG G+  +   P  +  L  G+  I  AAG 
Sbjct: 414 TAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETI--AAGG 471

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++ +G V+ +G+++ G+   G   T    +P  V  L +  V   A G++ T  L
Sbjct: 472 WHTCALTSSGGVWCWGRNNSGQ--LGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCAL 528

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G V+ + +    +LG  T  +   P  + G    + V  IAAG  +  AL    S  
Sbjct: 529 TGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTV--IAAGRFHTCALT---SSG 583

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+  G    G+LG G+ T+   P  +     L      +AAG WH   +   G V  WG
Sbjct: 584 GVWCWGANFDGQLGDGTTTNRTTPVAVSG---LPSGVTAIAAGGWHTCALTSSGEVWCWG 640

Query: 285 WGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
              YG LG G     S P  V  L + V AI  A G   T  ++  G+V+ +G      L
Sbjct: 641 DNYYGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGWEHTCALTSSGEVWCWGDNYYGQL 698

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G     DG      N  TP  V+ L      V  I+    +Y   HT ALT SG +  +G
Sbjct: 699 G-----DGT---TTNRSTPGAVSGLP---SGVTAIAA--GVY---HTCALTGSGGVMCWG 742

Query: 404 AGDKGQLG 411
               GQLG
Sbjct: 743 NNGDGQLG 750



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 165/375 (44%), Gaps = 33/375 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+ S G V+ +G N+SGQLG GTT     P  +  L  G+  I  AAG   T 
Sbjct: 367 AGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAI--AAGGLHTC 424

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +  +G V+ +G ++ G+   G       ++P  V  L +  V   A G + T  L+  G
Sbjct: 425 ALMSSGGVWCWGLNNSGQLGDGSD--TDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSG 481

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+ +   N  +LG  +    + P  + G      V  IAAG  +  AL    SG  V+ 
Sbjct: 482 GVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGDYHTCAL--TGSG-GVWC 536

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G  L G+LG G+ TD   P  +     L     V+AAG +H   +   G V  WG    
Sbjct: 537 WGYNLSGQLGDGTTTDRSTPVAVSG---LTSGVTVIAAGRFHTCALTSSGGVWCWGANFD 593

Query: 289 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LG G     + P  V  L + V AI  A G + T  ++  G+V+ +G      LG   
Sbjct: 594 GQLGDGTTTNRTTPVAVSGLPSGVTAI--AAGGWHTCALTSSGEVWCWGDNYYGQLG--- 648

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG      N  TP  V+ L      V  I+      W  HT ALT SG+++ +G    
Sbjct: 649 --DGT---TTNRSTPGAVSGLP---SGVTAIAAG----WE-HTCALTSSGEVWCWGDNYY 695

Query: 408 GQLGIELVNNQTERG 422
           GQLG     N++  G
Sbjct: 696 GQLGDGTTTNRSTPG 710



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 153/364 (42%), Gaps = 32/364 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+T  G V  +G+N SGQLG+G T     P  +  L  G+  I  AAG   T 
Sbjct: 111 AGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI--AAGGDHTC 168

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +  +G V  +G + +G+   G    +   +P  V  L +  V   A G   T  L+  G
Sbjct: 169 ALMSSGGVMCWGDNYYGQLGDGTTTNRR--TPVAVSGLPS-GVTAIAAGGLHTCALTGSG 225

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+ + +    +LG  T          +G L +  +  IAAG  +  AL    S   V+ 
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALM---SSGGVWC 281

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG GS TD   P  +     L      +AAG +H   +   G V  WG   +
Sbjct: 282 WGRNDSGQLGDGSDTDSSTPVAVSG---LPSGVTAIAAGDYHTCALTGSGEVWCWGGNGF 338

Query: 289 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
           G LG G     S P  V  L + V+ I  A GDY T  +   G V+ +G   S  LG   
Sbjct: 339 GQLGDGTTTARSTPAAVSGLPSGVETI--AAGDYHTCALMSSGGVWCWGRNNSGQLG--- 393

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG     +   TP  V+ L      +    L        HT AL  SG ++ +G  + 
Sbjct: 394 --DGTTTARS---TPAAVSGLPSGVTAIAAGGL--------HTCALMSSGGVWCWGLNNS 440

Query: 408 GQLG 411
           GQLG
Sbjct: 441 GQLG 444



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 159/384 (41%), Gaps = 41/384 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+T  G V  +G N  GQLG GT      P  +  L  G+  I  AAG   T 
Sbjct: 60  AGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTAI--AAGNYHTC 117

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V  +G +  G+   G+  T   ++P  V  L +     AA G+   A++S  G
Sbjct: 118 ALTGSGGVRCWGANYSGQLGNGL--TFGRSTPGAVSGLPSGVTAIAAGGDHTCALMSSGG 175

Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
                 WG++   +LG  T  N   P  + G      V  IAAG  +  AL        V
Sbjct: 176 ---VMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSG--VTAIAAGGLHTCALTGSGE---V 227

Query: 227 YSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +  G    G+LG G+ T  +  P  +     L      +AAG  H   +   G V  WG 
Sbjct: 228 WCWGYNYYGQLGDGTTTYSRSTPAAVGG---LPSGMTAIAAGGLHTCALMSSGGVWCWGR 284

Query: 286 GRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              G LG G++   S P  V  L + V AI  A GDY T  ++  G+V+ +G       G
Sbjct: 285 NDSGQLGDGSDTDSSTPVAVSGLPSGVTAI--AAGDYHTCALTGSGEVWCWG-----GNG 337

Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
              + DG     +   TP  V+ L    E +           + HT AL  SG ++ +G 
Sbjct: 338 FGQLGDGTTTARS---TPAAVSGLPSGVETIAAG--------DYHTCALMSSGGVWCWGR 386

Query: 405 GDKGQLGIELVNNQTERGNPERVD 428
            + GQLG       T R  P  V 
Sbjct: 387 NNSGQLGD---GTTTARSTPAAVS 407



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 137/340 (40%), Gaps = 38/340 (11%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           LQG+  I  AAG   T  ++ +G V  +G + FG+   G   T+  ++P  V  L +  V
Sbjct: 52  LQGVTAI--AAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTR--STPGAVSGLPS-GV 106

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAA 209
              A GN+ T  L+  G V  +      +LG+        P    G +  +P  V  IAA
Sbjct: 107 TAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTP----GAVSGLPSGVTAIAA 162

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  +  AL    S   V   G    G+LG G+ T+ + P  +     L      +AAG  
Sbjct: 163 GGDHTCALM---SSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSG---LPSGVTAIAAGGL 216

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           H   +   G V  WG+  YG LG G      S P  V  L       +A G   T  +  
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMS 275

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G V+ +G  +S  LG  +  D          TP  V+ L      V  I+       + 
Sbjct: 276 SGGVWCWGRNDSGQLGDGSDTDSS--------TPVAVSGLP---SGVTAIAAG-----DY 319

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
           HT ALT SG+++ +G    GQLG       T R  P  V 
Sbjct: 320 HTCALTGSGEVWCWGGNGFGQLGD---GTTTARSTPAAVS 356



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 117/258 (45%), Gaps = 22/258 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+T  G V+ +G N SGQLG GTT +   P  +  L  G+ +I  AAG   T 
Sbjct: 520 AGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVI--AAGRFHTC 577

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            ++ +G V+ +G +  G+   G   T   T+P  V  L +  V   A G + T  L+  G
Sbjct: 578 ALTSSGGVWCWGANFDGQLGDGT--TTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSG 634

Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 224
            V+   WG++   +LG  T  N   P    G +  +P  V  IAAG+ +  AL    S  
Sbjct: 635 EVW--CWGDNYYGQLGDGTTTNRSTP----GAVSGLPSGVTAIAAGWEHTCALT---SSG 685

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+  G    G+LG G+ T+   P  +     L      +AAG +H   +   G V  WG
Sbjct: 686 EVWCWGDNYYGQLGDGTTTNRSTPGAVSG---LPSGVTAIAAGVYHTCALTGSGGVMCWG 742

Query: 285 WGRYGCLGHGNEECESVP 302
               G LG G     + P
Sbjct: 743 NNGDGQLGDGRPLYRTTP 760


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG         P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+   + 
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
               S   G     G         P  I   +  NL  + ++ G  H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           G    G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 39/298 (13%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ V+ I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313

Query: 285 WGRYGCLGHGNEECESVPKVVQALN---------------DVKAIHVATGDYTTFVVS 327
                   HG  + +S P   +AL                DV+  H+  G Y  FV +
Sbjct: 314 --------HGPSD-KSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F WG D+R     +    E  P         ++Q A+G  + L L    +   V S G  
Sbjct: 3   FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG       + P  I+  + LN+   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 51  SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E    PK +  LN +K I V+ G Y +  +S+D  V+S+G      LG       
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q        +PQ V SL+        I L       AH+FAL+  G  + +G+   GQL 
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214

Query: 412 IELVNNQTERGNP 424
           +   N   +   P
Sbjct: 215 LSGRNVPVQSNKP 227



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           GT   E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +     
Sbjct: 6   GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  + AL ++ 
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            I+++ GD  T V+ +DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 24/282 (8%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG    P    P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196

Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
           S  G   SFG G S S G  A++       +N   P  + +LK +   V+ IS  +    
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE--- 246

Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
             HT  L + GK++ FG    GQLG      +      ER+D
Sbjct: 247 --HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + +I  + 
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T ++   G+V+ FG +S G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG 176
           A +   G+V +F  G
Sbjct: 301 AYVHTTGQVISFGHG 315


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G ++++G N  GQLG G        P+ +  L GI + Q +AG  
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEA 201

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +S +G +Y++GK+ FG+   G+  T+   SP L+E+L N  V   A G   TA+L+
Sbjct: 202 HSMALSMSGNIYSWGKNEFGQL--GLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           ++G ++TF  G   +LGH++  N++ P  L+  L    V QIA G  + LA         
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLG--K 316

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           V+S G G  G+LG+G   D+  P
Sbjct: 317 VFSFGSGKEGQLGNGGTRDQLIP 339



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 22/215 (10%)

Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 257
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E    +
Sbjct: 135 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGI 191

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            L    ++AG  H+  +   G + +WG   +G LG  + E +  P +++AL++ K   +A
Sbjct: 192 PL--AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLA 249

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            G   T ++++DG +++FG G+   LGHN+          N L P LV  L     RV Q
Sbjct: 250 CGGSHTALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--AGNRVTQ 299

Query: 378 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 411
           I+      W  HT A +++ GK+++FG+G +GQLG
Sbjct: 300 IACGR---W--HTLAYVSDLGKVFSFGSGKEGQLG 329



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 25/269 (9%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ I+  + ++I     GA   +++S  G+ +          EY     K +    +++ 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSGGKPF----------EYDNYSMKHLRFESILQE 137

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENI 202
            K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  I
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLSGI 191

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
           P+ QI+AG  + +AL+   SG  +YS G    G+LG      +  P LIE   L N +  
Sbjct: 192 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +A G  H A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G + 
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306

Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
           T   VS+ G V+SFG G+   LG+    D
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 27/268 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H + ++S G  + + + S   L   +            LQ  +IIQ   G   ++ +
Sbjct: 105 GADHMLILSSGGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S  G+++A+G++  G+   G +     T+PQ+VE L  I + Q + G   +  LS  G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNI 212

Query: 171 YTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           Y  SWG +   +LG  HTE  D     L+  L+N  V  +A G  +  AL  Q  G+ ++
Sbjct: 213 Y--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLACGGSH-TALLTQ-DGL-LF 265

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  +E  P L+   +L   +   +A G WH  A V   G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVA--ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSG 323

Query: 287 RYGCLGHG--NEECESVPKVVQALNDVK 312
           + G LG+G   ++   +P  V +  D+K
Sbjct: 324 KEGQLGNGGTRDQLIPLPMKVSSNEDLK 351



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 3/151 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS+A++  G +YS+G N  GQLG   TE +  P  I +L   ++   A G  
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T L++  G ++ FG    G+   G   T+    P LV  L    V Q A G + T A +
Sbjct: 254 HTALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV 311

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           S  G+V++F  G + +LG+    + + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)

Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
           GGK         KH R     Q    + + +  G +H+  + + G +  WG   +G LG 
Sbjct: 115 GGKPFEYDNYSMKHLRFESILQ--EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGV 172

Query: 294 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAIAD 350
           G +    + P++V+ L+ +    ++ G+  +  +S  G++YS+G  E   LG  H    D
Sbjct: 173 GRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKD 232

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
                     +P L+ +L   N++V  ++   S     HT  LT+ G L+ FGAG  GQL
Sbjct: 233 ----------SPSLIEALD--NQKVEFLACGGS-----HTALLTQDGLLFTFGAGKHGQL 275

Query: 411 GIELVNNQ 418
           G     N+
Sbjct: 276 GHNSTQNE 283


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 189/426 (44%), Gaps = 46/426 (10%)

Query: 7   IFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYS 66
           ++  + +A   +L +       L LR L        R N+ A AG   S A+   G V+S
Sbjct: 198 VYNLIVQASSGNLTRTA----PLTLRVL--------RANTLA-AGGYFSAAIKPNGQVWS 244

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G N+ GQLG  TT       P ++      +  + G    + +++ G+V   G+D +G+
Sbjct: 245 WGDNTYGQLGRATTSPS-DSTPTQASLINDAVSISLGEYHAIALTNDGRVVTLGRDDYGQ 303

Query: 127 AEYG---VQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
              G     GT   T+P L +++    I  V    G + +  L+ EG VY +   +  +L
Sbjct: 304 LGDGPGDSSGTH--TAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQL 361

Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
           G  T     E   L+  L +  V+ +AAG  + LAL    S   V++ G    G+LG G 
Sbjct: 362 GLGTITAPQESPALIPGLSD--VIALAAGDDHTLALKADGS---VWAWGDNPNGELGTGD 416

Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
            T    P  +     +      +AAG  H+  +  DG V TWG+  +G LG+G+    +V
Sbjct: 417 ITPYSVPTAVSNLPGVK----AIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNV 472

Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
           P  V  L DV  + +A G   T  V  +G V ++G  +S  LG+ A    Q        T
Sbjct: 473 PVPVTGLTDV--VGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQ-------TT 523

Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 421
           P  V  +     R V+  LT  I+   H  AL + G + A+G+  +GQLG +   N ++ 
Sbjct: 524 PVDVQGIP--TGRSVR-GLTAGIF---HALALLDDGSMVAWGSNVQGQLG-DGTPNSSDT 576

Query: 422 GNPERV 427
             P  +
Sbjct: 577 AKPVSI 582


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 24/302 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT  G +Y FGSN+ GQLG        +P  +++L+  +++ A+ G   T+L 
Sbjct: 45  GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
           ++ G++Y+ G +S  E + G+  T   TS Q +      + + Q + G+  +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGK 162

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSG 223
           +  F WG+++  +LG       +E   +  T + I    P+  I+ GY Y  A   Q   
Sbjct: 163 L--FMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGY-YHSAFVTQDG- 211

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             +Y+ G    GKLG  S   +KH +  ++   L+ +  +V+ G  H   V +   V T+
Sbjct: 212 -ELYTFGEPENGKLGLPSDKLKKHKK-PQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTF 268

Query: 284 GWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           G G++G LGHG    E+ +PK V  L     ++V  G+  T V+++ G +Y+FG G    
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGK 328

Query: 343 LG 344
           LG
Sbjct: 329 LG 330



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 22/256 (8%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 106
           A  G  H++  T +G +YS G NS GQLG G T      + I       +I Q +AG+  
Sbjct: 94  ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNT 153

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +  ++  G+++ +G +S  E + G++   + ++PQ ++  K I  +  + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ 209

Query: 167 EGRVYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +G +YTF    + +LG    P+D      +P  + G    + +V  + G  + +A+  + 
Sbjct: 210 DGELYTFGEPENGKLGL---PSDKLKKHKKPQRVSGLSGKVKIV--SCGGEHTIAVTEK- 263

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
               VY+ G G  G+LGHG+   E   P+ ++      +  + V  G  H AV+   G +
Sbjct: 264 ---EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLL 318

Query: 281 CTWGWGRYGCLGHGNE 296
            T+G GR+G LG G E
Sbjct: 319 YTFGDGRHGKLGLGEE 334



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 158/358 (44%), Gaps = 39/358 (10%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           V   G +++FG +   +       + W       L+  +    + G   T+L++  G++Y
Sbjct: 10  VPDSGALFTFGKS---KFAENIPSKFW-------LKNDKPAHISCGDEHTVLVTGNGKLY 59

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            FG +++G+   G++    ++ P  V++LK+  VV A+ G   T + + +G++Y+    +
Sbjct: 60  VFGSNNWGQ--LGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNS 117

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
           + +LG            +        + Q++AG     AL        ++  G    G+L
Sbjct: 118 EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVD---GKLFMWGDNSEGQL 174

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G         P+ I+  + ++     ++ G +H+A V QDG + T+G    G LG  +++
Sbjct: 175 GLEKEAIYSTPQKIDIGKPISW----ISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDK 230

Query: 298 CES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGN 354
            +    P+ V  L+    I    G++T  V   + +VY+FG G+   LGH   I + Q  
Sbjct: 231 LKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT--EKEVYTFGLGQFGQLGHGTFIFETQLP 288

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           +  +VLT + +  +                    HT  +T+ G LY FG G  G+LG+
Sbjct: 289 KAVDVLTKKTILYV---------------TCGENHTAVITDKGLLYTFGDGRHGKLGL 331



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 17/177 (9%)

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           +F L N +P  ++ G  H  +V  +G++  +G   +G LG       S P  V+AL   K
Sbjct: 31  KFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK 90

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            +  + G   T + +E G +YS G      LG   + D  G            TS ++++
Sbjct: 91  VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLG---LGDTSGR-----------TSFQEIS 136

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
               Q  +      +  + ALT  GKL+ +G   +GQLG+E    +     P+++DI
Sbjct: 137 FFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLE---KEAIYSTPQKIDI 190



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 11/229 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG   S A+T  G ++ +G NS GQL  G  +E     P +   G  I   + G   
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQL--GLEKEAIYSTPQKIDIGKPISWISCGYYH 203

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +  ++  G++Y FG+   G+        K    PQ V  L     + +  G    AV  +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK 263

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           E  VYTF  G   +LGH T   + +    +  L    ++ +  G  +   +  +  G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK--GL-L 318

Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           Y+ G G  GKLG G    T++  P L   F    +Q   VA G  H  V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQ--SVACGGCHMLV 365


>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
 gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
          Length = 402

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 32/273 (11%)

Query: 84  WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
           W P     L G+R+    +G  A  ++LI+  G+++++G++  G+  +G   TK V +P+
Sbjct: 135 WGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPR 192

Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
           LVE L +  +V AA G   T  L+  G V+ F      +LG   +  D  P P       
Sbjct: 193 LVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNG 251

Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------EKHPR 249
            P+ ++A G  + + + C+ +   +YS GC   G+LGH S               E  PR
Sbjct: 252 QPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 308

Query: 250 LIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
            +  F       Q+L +  VVV   A GA H  V+    RV +WG+G YG LGH  ++ E
Sbjct: 309 RVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE 368

Query: 300 SVPKVVQALN--DVKAIHVATGDYTTFVVSEDG 330
            VP++V+  +     A  +  G   +F VSE G
Sbjct: 369 MVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVG 401



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 57/302 (18%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 83  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR +  L    I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 260

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 261 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377

Query: 255 QL 256
             
Sbjct: 378 DF 379



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 194

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 31/198 (15%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 205 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 264 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380

Query: 204 ---VVQIAAGYCYLLALA 218
                QI AGY    A++
Sbjct: 381 GRGASQIYAGYTCSFAVS 398



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 34/214 (15%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 220

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           A G   T V+     V+S+G G    LGH    D
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 367



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+LV  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLVEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 224

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 24/302 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ VT  G +Y FGSN+ GQLG        +P  +++L+  +++ A+ G   T+L 
Sbjct: 45  GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
           ++ G++Y+ G +S  E + G+  T   TS Q +      + + Q + G+  +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGK 162

Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSG 223
           +  F WG+++  +LG       +E   +  T + I    P+  I+ GY Y  A   Q   
Sbjct: 163 L--FMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGY-YHSAFVTQDG- 211

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             +Y+ G    GKLG  S   +KH +  ++   L+ +  +V+ G  H   V +   V T+
Sbjct: 212 -ELYTFGEPENGKLGLPSDKLKKHKK-PQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTF 268

Query: 284 GWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           G G++G LGHG    E+ +PK V  L     ++V  G+  T V+++ G +Y+FG G    
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGK 328

Query: 343 LG 344
           LG
Sbjct: 329 LG 330



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 22/256 (8%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 106
           A  G  H++  T +G +YS G NS GQLG G T      + I       +I Q +AG+  
Sbjct: 94  ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNT 153

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +  ++  G+++ +G +S  E + G++   + ++PQ ++  K I  +  + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ 209

Query: 167 EGRVYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           +G +YTF    + +LG    P+D      +P  + G    + +V  + G  + +A+  + 
Sbjct: 210 DGELYTFGEPENGKLGL---PSDKLKKHKKPQRVSGLSGKVKIV--SCGGEHTIAVTEK- 263

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
               VY+ G G  G+LGHG+   E   P+ ++      +  + V  G  H AV+   G +
Sbjct: 264 ---EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLL 318

Query: 281 CTWGWGRYGCLGHGNE 296
            T+G GR+G LG G E
Sbjct: 319 YTFGDGRHGKLGLGEE 334



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 158/358 (44%), Gaps = 39/358 (10%)

Query: 58  VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
           V   G +++FG +   +       + W       L+  R    + G   T+L++  G++Y
Sbjct: 10  VPDSGALFTFGKS---KFAENIPSKFW-------LKNDRPAHISCGDEHTVLVTGNGKLY 59

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            FG +++G+   G++    ++ P  V++LK+  VV A+ G   T + + +G++Y+    +
Sbjct: 60  VFGSNNWGQ--LGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNS 117

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
           + +LG            +        + Q++AG     AL        ++  G    G+L
Sbjct: 118 EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVD---GKLFMWGDNSEGQL 174

Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
           G         P+ I+  + ++     ++ G +H+A V QDG + T+G    G LG  +++
Sbjct: 175 GLEKEAIYSTPQKIDIGKPISW----ISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDK 230

Query: 298 CES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGN 354
            +    P+ V  L+    I    G++T  V   + +VY+FG G+   LGH   I + Q  
Sbjct: 231 LKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT--EKEVYTFGLGQFGQLGHGTFIFETQLP 288

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           +  +VLT + +  +                    HT  +T+ G LY FG G  G+LG+
Sbjct: 289 KAVDVLTKKTILYV---------------TCGENHTAVITDKGLLYTFGDGRHGKLGL 331



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 17/177 (9%)

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           +F L N +P  ++ G  H  +V  +G++  +G   +G LG       S P  V+AL   K
Sbjct: 31  KFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK 90

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            +  + G   T + +E G +YS G      LG   + D  G            TS ++++
Sbjct: 91  VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLG---LGDTSGR-----------TSFQEIS 136

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
               Q  +      +  + ALT  GKL+ +G   +GQLG+E    +     P+++DI
Sbjct: 137 FFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLE---KEAIYSTPQKIDI 190



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 11/229 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG   S A+T  G ++ +G NS GQL  G  +E     P +   G  I   + G   
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQL--GLEKEAIYSTPQKIDIGKPISWISCGYYH 203

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           +  ++  G++Y FG+   G+        K    PQ V  L     + +  G    AV  +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK 263

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           E  VYTF  G   +LGH T   + +    +  L    ++ +  G  +   +  +  G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK--GL-L 318

Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           Y+ G G  GKLG G    T++  P L   F    +Q   VA G  H  V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQ--SVACGGCHMLV 365


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 25/302 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++ +T KG V++ G NSSGQLG    +E  + P  +        +  AAG   +  
Sbjct: 69  GGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPD-PCVHIAAGRYHSAA 127

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+ +G+ Y +G++S G+   G +   +  +PQ +ESL  + +   A+G   +  L+  G+
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQ 187

Query: 170 VYTFSWGND--ARLGH---------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           V   SWG +    LGH           + N+  P  ++  LE + V  ++AG   L+  A
Sbjct: 188 V--LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPR-IIHCLEKLQVRSVSAG---LVHSA 241

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           C      +YS G G   +LG G+  D   P  I     ++     ++ G +H   + QDG
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS----SISCGGYHTGAITQDG 297

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            + TWG   +GCLG G     S P  +++L +     ++ G   T  +S DG ++S+G G
Sbjct: 298 DIYTWGSNEHGCLGSGF-RASSKPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355

Query: 339 ES 340
            S
Sbjct: 356 GS 357



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 33/305 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 107
           AG  HS A+TS G  Y +G NS GQLG G   +     P+ + SL G+R+   A G   +
Sbjct: 120 AGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHS 179

Query: 108 MLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           + +++ GQV ++G + FG   +G         + T   T P+++  L+ + V   + G  
Sbjct: 180 LGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT-PRIIHCLEKLQVRSVSAGLV 238

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A     G +Y+F  G+  +LG     +  +P P    + ++P V   +   Y      
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP----IPDLPRVSSISCGGYHTGAIT 294

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           Q     +Y+ G    G LG G R   K  RL    +    +   ++ G  H A +  DG 
Sbjct: 295 QDG--DIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSE---ISCGWKHTAAI-SDGY 348

Query: 280 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           + +WGW G YG            LG G +     P  ++  + + A+HV+ G   T  + 
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408

Query: 328 EDGDV 332
           E+ ++
Sbjct: 409 EEIEI 413



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 19/288 (6%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG   +  ++ P   R+L+       + G   T++++D G+V+A G +S G+
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
               ++ ++    P  V    +   V  A G + +A ++  G  Y +   ++ +LG    
Sbjct: 93  LGVPLK-SESSFDPVEVHGFPDP-CVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150

Query: 187 PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----- 240
              V   P  + +L  + +  +A G  + L LA   +G  V S G    G LGHG     
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ETGQ-VLSWGTNRFGCLGHGEMTGF 207

Query: 241 ----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
                 T+E  PR+I   +   LQ   V+AG  H+A     G + ++G G    LG GN 
Sbjct: 208 FDFFKDTNEYTPRIIHCLE--KLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN 265

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              S P  +  L  V +I  + G Y T  +++DGD+Y++G  E   LG
Sbjct: 266 NDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGSNEHGCLG 311



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 46/289 (15%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPH 193
           P L  +L++      + G   T +L+ +GRV+     +  +LG         +P +V   
Sbjct: 52  PVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGF 111

Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLI 251
           P        P V IAAG  +  A+    S    Y  G    G+LG G R    +  P+ +
Sbjct: 112 P-------DPCVHIAAGRYHSAAIT---SSGETYVWGRNSEGQLGLGKRAKSVYITPQKM 161

Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG---------NEECESVP 302
           E    + L+   +A G  H+  + + G+V +WG  R+GCLGHG          +  E  P
Sbjct: 162 ESLAGMRLK--ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTP 219

Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
           +++  L  ++   V+ G   +    + G +YSFG G    LG        GN + +   P
Sbjct: 220 RIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLG-------LGNNN-DASQP 271

Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
             +  L +V+      S++   Y   HT A+T+ G +Y +G+ + G LG
Sbjct: 272 CPIPDLPRVS------SISCGGY---HTGAITQDGDIYTWGSNEHGCLG 311



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 24/266 (9%)

Query: 163 VLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           V  + G+ +   WGN    RLG     +  EP  L   LE+     ++ G  + L L  +
Sbjct: 21  VSGKAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGAHTLILTDK 79

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
                V++ G    G+LG   +++    P  +  F      P V +AAG +H+A +   G
Sbjct: 80  GR---VFATGLNSSGQLGVPLKSESSFDPVEVHGFP----DPCVHIAAGRYHSAAITSSG 132

Query: 279 RVCTWGWGRYGCLGHGNEECESV---PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
               WG    G LG G +  +SV   P+ +++L  ++   +A G   +  ++E G V S+
Sbjct: 133 ETYVWGRNSEGQLGLG-KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSW 191

Query: 336 GCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           G      LGH  +       +  N  TP+++  L+++  R V   L        H+    
Sbjct: 192 GTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLV-------HSACAD 244

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTE 420
           +SG +Y+FG G   QLG+   N+ ++
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQ 270


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 43/330 (13%)

Query: 101 AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGN 158
             G   TML+S +  Q+Y+ G  SF   +   + T   +  P LV  LK+  + Q A G 
Sbjct: 101 VCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGR 160

Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL----LGTLENIPVVQIAAGYCYL 214
             T VL+ + RV++F  G++ +LG  +  N  +P P+    L  L NI  +++  G+ + 
Sbjct: 161 RHTLVLTEDFRVFSFGVGSEYQLGVGSTEN--QPLPVEIESLSKLGNI--IKLECGWGHS 216

Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAV 273
           L L    S   +++ G     + GHG   +  H P++I+     N +   +  G+     
Sbjct: 217 LVLT---SDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT----NYKFKNIFTGSDFNLA 269

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--------DVKAIH----VATGDY 321
           +  DGRVC+WG G +G LGHG+ +    PK++Q++         +   I+    VA G  
Sbjct: 270 ITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFS 329

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
              ++  DG + + G   +  LG     D       N L P  +       E+VV++S  
Sbjct: 330 HALIIDNDGKLLTLGWNGNGQLGSGVKGD-------NHLVPTKL-EFDFDGEKVVKVSAG 381

Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
            +     H+  +TESGKLY +G G+KG+LG
Sbjct: 382 RN-----HSACITESGKLYIWGNGNKGKLG 406



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 40/360 (11%)

Query: 44  ENSQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWR---PRPIRSLQGIRIIQ 99
           E    + G  H++ V+  K  +YS G  S   +     E  ++   P  +  L+  +I Q
Sbjct: 96  ECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQ 155

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVVQAAI 156
            A G   T+++++  +V++FG  S  E + GV  T+    P  +ESL    NI  ++   
Sbjct: 156 VAGGRRHTLVLTEDFRVFSFGVGS--EYQLGVGSTENQPLPVEIESLSKLGNIIKLECGW 213

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G+  + VL+ +G ++T+ +  D++ GH      +    ++ T  N     I  G  + LA
Sbjct: 214 GH--SLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLA 269

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------LLNLQPV----VVAA 266
           +    +   V S G G  G+LGHG   + + P+LI+  Q      L+N   +    +VA 
Sbjct: 270 IT---NDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVAC 326

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVP-KVVQALNDVKAIHVATGDYTTF 324
           G  HA ++  DG++ T GW   G LG G + +   VP K+    +  K + V+ G   + 
Sbjct: 327 GFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSA 386

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ-----VNERVVQIS 379
            ++E G +Y +G G    LG+       G    + LTP  +  + +      N++V+ IS
Sbjct: 387 CITESGKLYIWGNGNKGKLGN-------GKSVGDQLTPLELIDIDENNTDPSNQKVLNIS 439



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 29/198 (14%)

Query: 49  IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---------RIIQ 99
             G   ++A+T+ G V S+GS   GQLGHG T+    P+ I+S+Q +         RI +
Sbjct: 261 FTGSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYE 320

Query: 100 ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
               A G    ++I + G++   G +  G+   GV+G   +   +L        VV+ + 
Sbjct: 321 YKMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSA 380

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-VEPHPLLGTLENIPVVQIAAGYCYLL 215
           G   +A ++  G++Y +  GN  +LG+     D + P  L+   EN              
Sbjct: 381 GRNHSACITESGKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDEN-------------- 426

Query: 216 ALACQPSGMAVYSVGCGL 233
                PS   V ++ CG 
Sbjct: 427 --NTDPSNQKVLNISCGF 442



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 31/203 (15%)

Query: 226 VYSVGCGLGGKLGHGSR--TDEKHPRLIEQFQ-----------LLNLQPVVVAAGAWHAA 272
           +YS GCG+ GKLG  +     E  P  + +F              NL+   +  G +H  
Sbjct: 49  LYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGHYHTM 108

Query: 273 VVGQD-GRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDYTTFVVSE 328
           +V ++  ++ + GW  +  +   N+E      +P +V  L D K   VA G   T V++E
Sbjct: 109 LVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTLVLTE 168

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           D  V+SFG G    LG  +          N   P  + SL ++   ++++       W  
Sbjct: 169 DFRVFSFGVGSEYQLGVGST--------ENQPLPVEIESLSKLG-NIIKLECG----W-G 214

Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
           H+  LT  G ++ +G     Q G
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTG 237



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 15/112 (13%)

Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV--LTPQLVT 366
           ++++   +  G Y T +VS++ D   + CG ++ +  + +     N+  N   + P LVT
Sbjct: 93  DNLECKDIVCGHYHTMLVSKEKDQL-YSCGWTSFVAMDRV-----NKETNFKSIIPSLVT 146

Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
            LK    ++ Q++         HT  LTE  ++++FG G + QLG+    NQ
Sbjct: 147 PLKDF--KIKQVAGGRR-----HTLVLTEDFRVFSFGVGSEYQLGVGSTENQ 191


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 162/352 (46%), Gaps = 28/352 (7%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           VY+ G+  + QLG G  E+   P P++ L  G   I AAAG  +  L++   ++Y +G  
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
               A   ++  K +  P L E  +++ +V+   G      LS+ G VY   WGN +  G
Sbjct: 115 GV-YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYI--WGN-SEFG 170

Query: 183 HHTEPNDVEPH-PL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
                N    H P+ +    +  +V ++ G  +  A++       V++ G G+ G+LGH 
Sbjct: 171 QTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGR---VWTWGYGIDGQLGHN 227

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
              DE  P+ +   +   +  V      +   +   +GR+ T+G G  G LGHG      
Sbjct: 228 GTEDELKPKELTVIRGEGISRVTCGT-DFTGLLNETEGRLFTFGNGEAGQLGHGERGLCL 286

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            P VV  L++VK   VA G      +++DG  +S+G GE   LGH A  D         L
Sbjct: 287 EPSVV-PLDNVK--EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATED--------FL 335

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
            P+ + +L      VV +S         H+ ALTESG++Y +G    G+LG+
Sbjct: 336 KPEPIPTLGPAVG-VVSVSAG-----GGHSLALTESGQVYGWGFNASGRLGL 381



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 22/280 (7%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H IA++  G VY +G++  GQ G G  E +  P  +   +   I+  + G   +  +S  
Sbjct: 151 HGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKD 210

Query: 114 GQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVY 171
           G+V+ +G   +G + + G  GT+    P+ +  ++   + +   G  FT +L+  EGR++
Sbjct: 211 GRVWTWG---YGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLF 267

Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
           TF  G   +LGH      +EP  +   L+N  V ++AAG  ++LAL     G A +S G 
Sbjct: 268 TFGNGEAGQLGHGERGLCLEPSVV--PLDN--VKEVAAGGAHMLALT--KDGQA-WSWGW 320

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGWGR 287
           G  G+LGHG+  D   P  I       L P V    V+AG  H+  + + G+V  WG+  
Sbjct: 321 GEDGRLGHGATEDFLKPEPIP-----TLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNA 375

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 326
            G LG GNE     P +++AL D + +    G D++ F+ 
Sbjct: 376 SGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 3/112 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
           +  AG  H +A+T  G  +S+G    G+LGHG TE+  +P PI +L   + ++  +AG G
Sbjct: 298 EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGG 357

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
            ++ ++++GQVY +G ++ G    G + +  V +P L+++L +  V++A  G
Sbjct: 358 HSLALTESGQVYGWGFNASGRLGLGNESS--VMTPTLIKALADKRVLRAICG 407



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 72/244 (29%)

Query: 223 GMAVYSVGCGLGGKLGHGS----------------------------------------- 241
           G  VY+ G G   +LG G                                          
Sbjct: 52  GQGVYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYW 111

Query: 242 -----------RTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
                      R D++  +P L E  Q L +  V +  G  H   + ++G V  WG   +
Sbjct: 112 GSSGVYALLPMRRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIWGNSEF 169

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           G  G GN+E + +P  ++   D   + V+ G   +  VS+DG V+++G G    LGHN  
Sbjct: 170 GQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGT 229

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 407
            D         L P+ +T ++   E + +++          T  L E+ G+L+ FG G+ 
Sbjct: 230 ED--------ELKPKELTVIR--GEGISRVTCGTDF-----TGLLNETEGRLFTFGNGEA 274

Query: 408 GQLG 411
           GQLG
Sbjct: 275 GQLG 278



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS+A+T  G VY +G N+SG+LG G       P  I++L   R+++A  G   ++ 
Sbjct: 354 AGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLF 413

Query: 110 ISDA 113
           I+ A
Sbjct: 414 ITQA 417


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 153/300 (51%), Gaps = 15/300 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + +   V S G NS GQLG    +    P PI++L+ + +   + G   
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++  +P+ + +L  I ++Q + G++ +  LS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
           + +V  FSWG ++  +LG   E P+   P   + +LE IP+ Q+AAG  +  AL+ C  S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGTHSFALSLCGTS 202

Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
               +  G    G+L   G     +  + +    L NL  V ++ G  H AV+ QDG+V 
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258

Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
           T+G    G LG+     +  P++V+ ++ + +  +  G Y T   V   G V SFG G S
Sbjct: 259 TFGDNCSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  HS+AV  KG V+++G+ S GQLG G  +E  + P+ I +L GI+IIQ + G   ++ 
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +S   QV+++GK+S G+   G +      SPQ V SL+ I + Q A G   +  LS  G 
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGTHSFALSLCGT 201

Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +F WG+++     L     P        +G L+N+ VV I+ G  +   L        
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLT---QDGK 256

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
           V++ G    G+LG+    +++ P+L+E+   L  Q   +  G++H  A V   G+V ++G
Sbjct: 257 VFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313

Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
            G        + E  +    +  ++ A  L DV+  H+  G Y  FV +
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 78  GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           G    E + R      G  ++QAA+G   ++L+    +V + G +S G+   G +G +  
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
             P+ +++L+ + V   + G   +  +  +GRV+ +  G++ +LG   E  ++   P  +
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122

Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
            TL  I ++Q++ G+ + LAL+       V+S G    G+LG G     +  P+ +   +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
            + L    VAAG  H+  +   G    WG    G L   G       + P  + AL ++ 
Sbjct: 180 GIPL--AQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG 237

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
            ++++ GD  T V+++DG V++FG   S  LG++   + +G        PQLV   ++++
Sbjct: 238 VVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRG--------PQLV---ERID 286

Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
             V QI        + HT A    +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 20/222 (9%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++Q A+G  + L L    +   V S G    G+LG       + P  I+  + L +   +
Sbjct: 25  LLQAASGERHSLLLL---TNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVD--L 79

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
           V+ G  H+  V   GRV  WG G  G LG G  +E    PK +  LN +K I V+ G Y 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYH 139

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           +  +S+D  V+S+G      L       G G    +  +PQ V SL+        I L  
Sbjct: 140 SLALSKDSQVFSWGKNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
                 H+FAL+  G  + +G+   GQL +   N   +   P
Sbjct: 186 VAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKP 227



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 30/285 (10%)

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
           ++QAA G   + +L    RV   S G+++R  LG         P P+   LE + V  ++
Sbjct: 25  LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
            G  + LA+ C      V++ G G  G+LG G   +    P+ I    L  ++ + V+ G
Sbjct: 82  CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
            +H+  + +D +V +WG   +G LG G E   ++ P+ V++L  +    VA G   +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL 196

Query: 327 SEDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
           S  G  + +G    G+ A  G N  A  Q N+      P  + +LK +   VV IS  + 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPA--QSNK------PLSIGALKNLG--VVYISCGDE 246

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
                HT  LT+ GK++ FG    GQLG      +      ER+D
Sbjct: 247 -----HTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERID 286



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  + +GSNS+GQL   G     +  +P  I +L+ + ++  + 
Sbjct: 184 AQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISC 243

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
           G   T +++  G+V+ FG +  G+  Y     K    PQLVE +  + V Q   G++ T 
Sbjct: 244 GDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300

Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
           A +   G+V +F  G +D     H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 185/416 (44%), Gaps = 73/416 (17%)

Query: 46  SQAIAGPGHSIAVTS--KGVVYSFGSNSSGQLGHGTTEEEW------------RPRPIRS 91
           +Q I G   +  +T   +  V+S+GSN + +LGH   +               +P  +++
Sbjct: 97  NQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKA 156

Query: 92  LQGIRIIQAAAGAGRTMLISD-AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--- 147
           L+  +I   + G   +   S+ +G VY +G    G    G +   +V  PQ++E LK   
Sbjct: 157 LENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGR--LGNENEGVVQEPQVLECLKIAM 214

Query: 148 --NIFVVQAAIGNFFTAVL-----SREGRVYT---FSWGNDARL---------GHHTE-- 186
              + V+Q + G   T  L       EG       F WGN+ +L         G++ +  
Sbjct: 215 EIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQ 274

Query: 187 -------PNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
                  P+ ++P P     +N      ++ + A Y Y  AL    S   VY+ G G  G
Sbjct: 275 SAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALT---SNGNVYTWGSGEFG 331

Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
           +LG+     +  P+++++  L   Q   ++ G +H A + + G+V +WG G  G LGHG+
Sbjct: 332 RLGYMDIKKQPQPKVLKE--LTGFQVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGS 389

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 355
              E   + V AL ++  I ++ G+  T  ++  G+VYS+G G+   L            
Sbjct: 390 VLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSWGGGQLGQL-----------G 438

Query: 356 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           H + L   L   +  + + + QIS         H+ ALT+ GKL+ +G+ + GQLG
Sbjct: 439 HGDFLRQSLPIKVANLEDNIAQISAG-----KRHSSALTDDGKLFTWGSNEYGQLG 489



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 64/319 (20%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND-------- 189
           P+ V +L+   + Q   G+  T  +++    + FSWG++  A+LGH              
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 190 ---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
              V+   ++  LEN  +  ++ G  +  A + + SG+ VY  G GL G+LG+ +    +
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNE-SGL-VYGWGLGLNGRLGNENEGVVQ 202

Query: 247 HPRLIEQFQL---LNLQPVVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGH 293
            P+++E  ++   + ++ + ++ G  H   + Q            ++  WG      LG 
Sbjct: 203 EPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262

Query: 294 ------GNEECESV----------PKVVQALNDVKA-----IHVATGDYTTFVVSEDGDV 332
                  NE+ +S           P   Q   D K      I V    Y +  ++ +G+V
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322

Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
           Y++G GE   LG+  I             PQ     +    +V +ISL    Y+  H  A
Sbjct: 323 YTWGSGEFGRLGYMDIKK----------QPQPKVLKELTGFQVTRISLG---YY--HGAA 367

Query: 393 LTESGKLYAFGAGDKGQLG 411
           +TE G+++++G G  GQLG
Sbjct: 368 ITEQGQVFSWGRGINGQLG 386



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 39/192 (20%)

Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV------ 301
           P  +   +  N+  V+  +          +  V +WG  +   LGH   +          
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 302 ------PKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLGHNAIADGQGN 354
                 P +V+AL + K   ++ G   +F  S E G VY +G G +  LG+         
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGN--------E 196

Query: 355 RHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFAL----------TESGKLYA 401
               V  PQ++  LK   ++  +V+QIS   +     HT AL          T   KL+ 
Sbjct: 197 NEGVVQEPQVLECLKIAMEIKMKVLQISCGEN-----HTLALIQMPPQNEGETSQNKLFV 251

Query: 402 FGAGDKGQLGIE 413
           +G  DK QLG++
Sbjct: 252 WGNNDKLQLGMD 263


>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
 gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
 gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
 gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
 gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
          Length = 523

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 86  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I
Sbjct: 146 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 205

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 263

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 264 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 323

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 324 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   +  
Sbjct: 381 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 434

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +   
Sbjct: 435 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 488

Query: 375 VVQISLTNSI 384
            V +  ++S+
Sbjct: 489 QVAMGYSHSL 498



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 208 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 266

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 267 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 325

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 326 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 383

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 384 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 434

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 435 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 491

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 492 MGYSHSLVIARD 503



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 140 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 197

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 313

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 314 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 364



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 223

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 388

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 389 QIYAGYTC-----SFAVSEVGGLFFWGA 411



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 375 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 423

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 424 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 483

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 484 GIFSEQVAMGYSHSLVIARD 503



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 138 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 182

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 183 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 227

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 228 GENKMGQLGL---GNQTD 242


>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
 gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
 gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
           AltName: Full=Telophase disk protein of 60 kDa
 gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
 gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
 gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
 gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
 gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
          Length = 522

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 85  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 205 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 262

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   +  
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 433

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +   
Sbjct: 434 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 487

Query: 375 VVQISLTNSI 384
            V +  ++S+
Sbjct: 488 QVAMGYSHSL 497



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 265

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 325 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 382

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 383 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 433

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 434 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 491 MGYSHSLVIARD 502



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 197 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 374 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 422

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 423 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 482

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 483 GIFSEQVAMGYSHSLVIARD 502



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 226

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 15/301 (4%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           QA +G  HS+ + S   VYS G NS GQLG    +   +P PI++L  + I   + G   
Sbjct: 25  QAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEH 84

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
           ++ +   G+V+A+G  S G+   G +  ++   P  +++L  I ++Q + G++ +  LS 
Sbjct: 85  SIAVCHKGRVFAWGAGSEGQLGIG-EFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSE 143

Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +G+V  FSWG ++  +LG   + +       + +LE IP+ Q+AAG  +  AL+   +  
Sbjct: 144 DGQV--FSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSY 201

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
              S   G     G  S      P  I+  +  NL  + ++ G  H AV+ +DG+V T+G
Sbjct: 202 GWGSNSVGQLALSGENSTVQISKPHSIDALK--NLGVIYISCGYEHTAVLTKDGQVFTFG 259

Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
               G L +        P++V+ +   +   +  G Y T         Y +  G+  SLG
Sbjct: 260 DNSSGQLQNNPRGKRRGPQLVEGIKG-QVSKIECGSYHTI-------AYVYTTGQVVSLG 311

Query: 345 H 345
           H
Sbjct: 312 H 312



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 31/257 (12%)

Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
           F W  D+R          +P  L G  + + ++Q A+G  + L L    S   VYS G  
Sbjct: 3   FHWAADSR----------QPRRLNGR-DGLELLQAASGERHSLLLF---SNHRVYSCGDN 48

Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
             G+LG     + + P  I+    L++   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 49  SLGQLGQKREQNTEQPEPIQALGTLDID--LVSCGKEHSIAVCHKGRVFAWGAGSEGQLG 106

Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
            G  +E   +P  ++ L  +K I V+ G Y +  +SEDG V+S+G      LG    +  
Sbjct: 107 IGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSS 166

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           Q        +PQ VTSL+        I L       +H+FAL+ +G  Y +G+   GQL 
Sbjct: 167 QA-------SPQKVTSLEG-------IPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLA 212

Query: 412 IELVNNQTERGNPERVD 428
           +   N+  +   P  +D
Sbjct: 213 LSGENSTVQISKPHSID 229



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 21/290 (7%)

Query: 85  RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
           +PR +    G+ ++QAA+G   ++L+    +VY+ G +S G+   G +  +    P+ ++
Sbjct: 11  QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQ--LGQKREQNTEQPEPIQ 68

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
           +L  + +   + G   +  +  +GRV+ +  G++ +LG   E  ++   P+ + TL  I 
Sbjct: 69  ALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIK 127

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPV 262
           ++Q++ G+ + LAL+       V+S G    G+LG G ++  +  P+ +   + + L   
Sbjct: 128 IIQVSCGHYHSLALS---EDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPL--A 182

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE---SVPKVVQALNDVKAIHVATG 319
            VAAG  H+  +   G    WG    G L    E      S P  + AL ++  I+++ G
Sbjct: 183 QVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCG 242

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
              T V+++DG V++FG   S  L +N     +G        PQLV  +K
Sbjct: 243 YEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRG--------PQLVEGIK 284



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           +Q  AG  HS A++  G  Y +GSNS GQL   G  +T +  +P  I +L+ + +I  + 
Sbjct: 182 AQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISC 241

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G   T +++  GQV+ FG +S G+ +   +G +    PQLVE +K   V +   G++ T 
Sbjct: 242 GYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKR--RGPQLVEGIKGQ-VSKIECGSYHTI 298

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
                   Y ++ G    LGH   P     H
Sbjct: 299 -------AYVYTTGQVVSLGHGPRPTSNPTH 322


>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
          Length = 458

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR +  L    I+ AA G   T+L+ + 
Sbjct: 97  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLLPET 156

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 157 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 214

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 215 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 274

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 275 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 331

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 332 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 384

Query: 331 DVYSFG 336
              S+G
Sbjct: 385 STISWG 390



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++ +   G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 143 AACGRNHTLLLPETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 201

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 202 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 260

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 261 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 318

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 319 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 369

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 370 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 426

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 427 MGYSHSLVIARD 438



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 75  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEXPRLL 132

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H  ++ + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 133 EG---LSHEVIVSAACGRNHTLLLPETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 188

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 189 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 248

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 249 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 299



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 47/270 (17%)

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           + +++ EG+++++      +LGH  +   VE   LL  L +  +V  A G  + L L   
Sbjct: 98  SLLITTEGKLWSWGRNEKGQLGH-GDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLL--- 153

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
           P   +V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 154 PETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 209

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 210 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 269

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 270 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 321

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             QI    +      +FA++E G L+ +GA
Sbjct: 322 ASQIYAGYTC-----SFAVSEVGGLFFWGA 346



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 320 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 373

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 374 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 433

Query: 163 VLSRE 167
           V++R+
Sbjct: 434 VIARD 438



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 73  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 117

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT  L E+G ++AF
Sbjct: 118 LGH-----GDTKR---VEXPRLLEGLS--HEVIVSAACGRN-----HTLLLPETGSVFAF 162

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 163 GENKMGQLGL---GNQTD 177


>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
          Length = 427

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKVACGAEFSMIMDCKGNLYSF 183

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  V    V +  ++S+
Sbjct: 354 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGVFTEQVAMGYSHSL 402



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKVACGAEF 170

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ V    VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVA 395

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 396 MGYSHSLVIARD 407



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  VA GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKVACGAEFSMIMDCKGNL 180

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 279 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 327

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 328 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 387

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            +F  Q A+G   + V++R+
Sbjct: 388 GVFTEQVAMGYSHSLVIARD 407



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 19/308 (6%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+TS G V ++G N+ GQLG+GTT     P  +    GIRI+  A GA  ++ 
Sbjct: 94  AGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLA 153

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++  G + A+G +  G  + G       ++P  V    N  V   A G     VL+  G 
Sbjct: 154 LTSTGSLLAWGSNDTG--QLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGP 211

Query: 170 VYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 223
               +WG   + +LG  T  +   P P+     N+P    V  IA G  + LAL    + 
Sbjct: 212 AALLAWGANREGQLGDGTVVDRSRPVPV-----NLPTGLTVTAIAGGRDHSLALTSDDT- 265

Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
             V + G    G+LG G+ T    P  +     +  +   +AAG  H+  +  DG    W
Sbjct: 266 --VLAWGGNSHGQLGDGTTTGSLLP--VTVVLPVGAEATAIAAGRLHSLALTSDGTALAW 321

Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS 342
           G   +G LG+G+    S P  V      + I +A+ D      ++ +G   ++G      
Sbjct: 322 GGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGH 381

Query: 343 LGHNAIAD 350
           LG     D
Sbjct: 382 LGDGTTTD 389



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 152/365 (41%), Gaps = 37/365 (10%)

Query: 55  SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
           S AV S  ++ ++G N  GQLG GTT +   P  +R   G  +   AAG   ++ ++ AG
Sbjct: 48  SAAVMSDAIL-AWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAG 106

Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
            V A+G+++  E + G   T     P  V     I +V  A+G   +  L+  G +   +
Sbjct: 107 TVLAWGRNT--EGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSL--LA 162

Query: 175 WGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-ACQPSGMAV 226
           WG+       D  +   + P  V   P      N  V  IAAG  + L L A  P+ +  
Sbjct: 163 WGSNDTGQLGDGSVTSSSTPVAVRLPP------NTTVAAIAAGRDHNLVLTATGPAALLA 216

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G+LG G+  D   P  +     L +    +A G  H+  +  D  V  WG  
Sbjct: 217 W--GANREGQLGDGTVVDRSRPVPVNLPTGLTV--TAIAGGRDHSLALTSDDTVLAWGGN 272

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            +G LG G      +P  V      +A  +A G   +  ++ DG   ++G      LG+ 
Sbjct: 273 SHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNG 332

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
           + +D          +  +  SL     R++ I+  +S     H  A+T  G   A+G   
Sbjct: 333 STSDS---------SEPVAVSLPG-GTRLISIASRDS----DHNVAITTEGAALAWGLNS 378

Query: 407 KGQLG 411
           +G LG
Sbjct: 379 QGHLG 383



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 122/314 (38%), Gaps = 27/314 (8%)

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           ++SDA  + A+G +  G+   G   T   + P  V       V   A G+  +  L+  G
Sbjct: 51  VMSDA--ILAWGGNDGGQLGDGT--TTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAG 106

Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V  +    + +LG+ T  +  EP   +     I +V +A G  + LAL    S   + +
Sbjct: 107 TVLAWGRNTEGQLGNGTTTSSGEPV-AVSLPSGIRIVAVAVGADHSLALTSTGS---LLA 162

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-- 286
            G    G+LG GS T    P  +      N     +AAG  H  V+   G      WG  
Sbjct: 163 WGSNDTGQLGDGSVTSSSTPVAVRLPP--NTTVAAIAAGRDHNLVLTATGPAALLAWGAN 220

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
           R G LG G     S P  V     +    +A G   +  ++ D  V ++G G S    H 
Sbjct: 221 REGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWG-GNS----HG 275

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
            + DG        L P  VT +  V      I+         H+ ALT  G   A+G   
Sbjct: 276 QLGDGT---TTGSLLP--VTVVLPVGAEATAIA-----AGRLHSLALTSDGTALAWGGNH 325

Query: 407 KGQLGIELVNNQTE 420
            GQLG    ++ +E
Sbjct: 326 WGQLGNGSTSDSSE 339



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA- 102
           E +   AG  HS+A+TS G   ++G N  GQLG+G+T +   P  +    G R+I  A+ 
Sbjct: 298 EATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASR 357

Query: 103 GAGRTMLISDAGQVYAFGKDSFG 125
            +   + I+  G   A+G +S G
Sbjct: 358 DSDHNVAITTEGAALAWGLNSQG 380


>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
          Length = 427

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 354 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 402



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 395

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 396 MGYSHSLVIARD 407



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 279 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 327

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 328 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 387

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 388 GIFSEQVAMGYSHSLVIARD 407



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 86

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146


>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
          Length = 457

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 20  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGC 79

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I
Sbjct: 80  LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 139

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 140 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 197

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 198 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 257

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 258 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 314

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   +  
Sbjct: 315 DFPGRGASRIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 368

Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
            +A G  ++ +V+ D    S+G
Sbjct: 369 SLACGK-SSIIVAADESTISWG 389



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 142 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 200

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 201 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 259

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 260 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 317

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                +I AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 318 GRGASRIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 368

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 369 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 425

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 426 MGYSHSLVIARD 437



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 74  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 131

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 132 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 187

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 188 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 247

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 248 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 298



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 99  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 157

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 158 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 210

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 211 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 270

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 271 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 322

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           +I    +      +FA++E G L+ +GA
Sbjct: 323 RIYAGYTC-----SFAVSEVGGLFFWGA 345



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  S+  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 309 RLVKLFDFPG-----RGASRIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 357

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 358 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 417

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 418 GIFSEQVAMGYSHSLVIARD 437



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 72  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 116

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 117 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 161

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 162 GENKMGQLGL---GNQTD 176


>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
          Length = 564

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 127 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 186

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I
Sbjct: 187 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 246

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 247 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 304

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 305 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 364

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 365 QILPVPNVVVRDVACGANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 421

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   +  
Sbjct: 422 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 475

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +   
Sbjct: 476 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 529

Query: 375 VVQISLTNSI 384
            V +  ++S+
Sbjct: 530 QVAMGYSHSL 539



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 249 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 307

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 308 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 366

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 367 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 424

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 425 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 475

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 476 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 532

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 533 MGYSHSLVIARD 544



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 181 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 238

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 239 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 294

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 295 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 354

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 355 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 405



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 206 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 264

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 265 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 317

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 318 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 377

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 378 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 429

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 430 QIYAGYTC-----SFAVSEVGGLFFWGA 452



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 416 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 464

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 465 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 524

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 525 GIFSEQVAMGYSHSLVIARD 544



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 179 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 223

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 224 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 268

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 269 GENKMGQLGL---GNQTD 283


>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
           cuniculus]
          Length = 560

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 164/369 (44%), Gaps = 41/369 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 199 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 258

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ +   +G +Y+F
Sbjct: 259 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMITDCKGNLYSF 316

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 317 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 376

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 377 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 433

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 434 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 486

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+   A  
Sbjct: 487 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV-IARD 540

Query: 391 FALTESGKL 399
            A TE  KL
Sbjct: 541 EAETEKEKL 549



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 245 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 303

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M+    G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 304 SMITDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 362

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 363 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 420

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 421 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 471

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 472 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 528

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 529 MGYSHSLVIARD 540



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 177 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 234

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 235 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 290

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + +    G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 291 GQPITKMACGAEFSMITDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 350

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 351 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 401



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 202 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 260

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + +    G +
Sbjct: 261 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMITDCKGNL 313

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 314 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 373

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 374 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 425

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 426 QIYAGYTC-----SFAVSEVGGLFFWGA 448



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 412 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 460

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 461 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 520

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 521 GIFSEQVAMGYSHSLVIARD 540



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 175 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 219

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 220 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 264

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 265 GENKMGQLGL---GNQTD 279


>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
          Length = 427

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353

Query: 331 DVYSFG 336
              S+G
Sbjct: 354 STISWG 359



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKLKSSTAAQEVKTLDGIFSEQVA 395

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 396 MGYSHSLVIARD 407



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 342

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKLKSSTAAQEVKTLDGIFSEQVAMGYSHSL 402

Query: 163 VLSRE 167
           V++R+
Sbjct: 403 VIARD 407



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 86

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146


>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 260

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 25/254 (9%)

Query: 94  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
           G++I   AAG   T+++SD GQV+ +G    G+   G +  ++V+SP ++  + +  +VQ
Sbjct: 10  GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQ 68

Query: 154 A-------------------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
                               A G   +AV++  G V  F WG   + G  +  +++ P  
Sbjct: 69  GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSP-T 127

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            + +L  I +  +AAG   L    C  +   VY+ G    G+LG GS   E  PRL++  
Sbjct: 128 CVSSLLGIQIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCP 184

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
            L N+    ++ GA H A+V  +G+V +WGW +YG LG G+    ++P  V A+    A 
Sbjct: 185 SLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAK 243

Query: 315 HVATGDYTTFVVSE 328
           +VA G + T +++E
Sbjct: 244 NVACGWWHTLLLAE 257



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 7/179 (3%)

Query: 47  QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +AIA  G HS  +T  G V +FG    GQ G G+T++E  P  + SL GI+I   AAG  
Sbjct: 86  KAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLW 145

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAV 163
            T+  S  G VYAFG + FG  + G    +  T P+L++  SL+N+ V   + G   TA+
Sbjct: 146 HTVCTSADGDVYAFGGNQFG--QLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTAL 203

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           ++  G+V+++ W    +LG     +   P  +   +E      +A G+ + L LA  P+
Sbjct: 204 VTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV--AIEGCIAKNVACGWWHTLLLAESPT 260



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 58/293 (19%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
           P LV     + +   A G   T VLS  G+V+ + +G + +LG  +    V    ++  +
Sbjct: 2   PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61

Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
           ++  +VQ                                 GS + E H      F++   
Sbjct: 62  DSSSLVQ---------------------------------GSMSSEGH-----NFRIPGS 83

Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
               +A G  H+AV+   G V  +GWG YG  G G+ + E  P  V +L  ++   VA G
Sbjct: 84  CIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAG 143

Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT--SLKQVNERVVQ 377
            + T   S DGDVY+FG  +   L       G G+  A  L P+L+   SL+ VN + + 
Sbjct: 144 LWHTVCTSADGDVYAFGGNQFGQL-------GTGSDQAETL-PRLLDCPSLENVNVKTIS 195

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
                      HT  +T++GK++++G    GQLG+    +  +R  P  V I+
Sbjct: 196 CGAR-------HTALVTDNGKVFSWGWNKYGQLGL---GDVIDRNIPSEVAIE 238



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 29/248 (11%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQA-------- 100
           AG  H++ ++  G V+ +G    GQLG G+       P  I  +    ++Q         
Sbjct: 18  AGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSEGHN 77

Query: 101 -----------AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
                      A G   + +I+DAG V AFG   +G+   G    +L  SP  V SL  I
Sbjct: 78  FRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDEL--SPTCVSSLLGI 135

Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIA 208
            +   A G + T   S +G VY F      +LG  ++  +  P  L   +LEN+ V  I+
Sbjct: 136 QIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTIS 195

Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
            G  +    A       V+S G    G+LG G   D   P    +  +       VA G 
Sbjct: 196 CGARH---TALVTDNGKVFSWGWNKYGQLGLGDVIDRNIP---SEVAIEGCIAKNVACGW 249

Query: 269 WHAAVVGQ 276
           WH  ++ +
Sbjct: 250 WHTLLLAE 257


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  HS+A++  G ++++G N  GQLG G        P+ +  L GI + Q +AG  
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEA 201

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M +S +G +Y++GK+ FG+   G+  T+   SP L+E+L N  V   A G   TA+L+
Sbjct: 202 HSMALSMSGNIYSWGKNEFGQL--GLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           ++G ++TF  G   +LGH++  N++ P  L+  L    V QIA G  + LA         
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLG--K 316

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           V+S G G  G+LG+G   D+  P
Sbjct: 317 VFSFGSGKEGQLGNGGTRDQLIP 339



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 50/328 (15%)

Query: 89  IRSLQGIRIIQAAAGAGRTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           +RS++  R  Q    +GR   +   G   QV+             + G+  + +P+ ++ 
Sbjct: 47  LRSVEATR--QICCSSGRLAFLERGGAGVQVHQL-----------LPGSDGLRTPKCIKL 93

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
            KN+ +    +G     +LS +G+ + +    D     H     +        L+   ++
Sbjct: 94  GKNMKIHSMDLGADHMLILSSDGKPFEY----DNYSMKHLRFESI--------LQEKKII 141

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 264
           QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L  +    +
Sbjct: 142 QITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEH--LAGIPLAQI 196

Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
           +AG  H+  +   G + +WG   +G LG  + E +  P +++AL++ K   +A G   T 
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTA 256

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
           ++++DG +++FG G+   LGHN+          N L P LV  L     RV QI+     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--AGNRVTQIACGR-- 304

Query: 385 YWNAHTFA-LTESGKLYAFGAGDKGQLG 411
            W  HT A +++ GK+++FG+G +GQLG
Sbjct: 305 -W--HTLAYVSDLGKVFSFGSGKEGQLG 329



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 25/269 (9%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           P+ I+  + ++I     GA   +++S  G+ +          EY     K +    +++ 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSDGKPF----------EYDNYSMKHLRFESILQE 137

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENI 202
            K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  I
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTAPQ-IVEHLAGI 191

Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
           P+ QI+AG  + +AL+   SG  +YS G    G+LG      +  P LIE   L N +  
Sbjct: 192 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246

Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
            +A G  H A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G + 
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306

Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
           T   VS+ G V+SFG G+   LG+    D
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 27/268 (10%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H + ++S G  + + + S   L   +            LQ  +IIQ   G   ++ +
Sbjct: 105 GADHMLILSSDGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           S  G+++A+G++  G+   G +     T+PQ+VE L  I + Q + G   +  LS  G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNI 212

Query: 171 YTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           Y  SWG +   +LG  HTE  D     L+  L+N  V  +A G  +  AL  Q  G+ ++
Sbjct: 213 Y--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLACGGSH-TALLTQ-DGL-LF 265

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
           + G G  G+LGH S  +E  P L+   +L   +   +A G WH  A V   G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVA--ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSG 323

Query: 287 RYGCLGHG--NEECESVPKVVQALNDVK 312
           + G LG+G   ++   +P  V +  D+K
Sbjct: 324 KEGQLGNGGTRDQLIPLPMKVSSNEDLK 351



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 3/151 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS+A++  G +YS+G N  GQLG   TE +  P  I +L   ++   A G  
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T L++  G ++ FG    G+   G   T+    P LV  L    V Q A G + T A +
Sbjct: 254 HTALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV 311

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
           S  G+V++F  G + +LG+    + + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 20/160 (12%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 320
           + +  G +H+  + + G +  WG   +G LG G +    + P++V+ L  +    ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGE 200

Query: 321 YTTFVVSEDGDVYSFGCGESASLG--HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
             +  +S  G++YS+G  E   LG  H    D          +P L+ +L   N++V  +
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLDHTESKD----------SPSLIEALD--NQKVEFL 248

Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
           +   S     HT  LT+ G L+ FGAG  GQLG     N+
Sbjct: 249 ACGGS-----HTALLTQDGLLFTFGAGKHGQLGHNSTQNE 283



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 25/156 (16%)

Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
           N++   +  GA H  ++  DG+        Y      +   ES+      L + K I + 
Sbjct: 96  NMKIHSMDLGADHMLILSSDGKPF-----EYDNYSMKHLRFESI------LQEKKIIQIT 144

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            GDY +  +S+ G+++++G      LG        G +  +   PQ+V       E +  
Sbjct: 145 CGDYHSLALSKGGELFAWGQNLHGQLG-------VGRKFPSTTAPQIV-------EHLAG 190

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
           I L       AH+ AL+ SG +Y++G  + GQLG++
Sbjct: 191 IPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLD 226


>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus laevis]
          Length = 600

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 29/362 (8%)

Query: 3   QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG 62
           Q++ I KP+    ++       G W L    L + +  C R+          +I  T   
Sbjct: 53  QRQRICKPVIACTKRSTDMVDFGKWPL-FALLSSQDLSCIRQACVFGCSANEAIYTTQNN 111

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 121
            V+ FG N S  LG G  +    PR +  L G +I+  + G+G   +L ++ G+VY++G 
Sbjct: 112 EVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGH 171

Query: 122 DSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
           + + +   G  +QGT   T  Q+   L +  V+Q A G+  +  L+ +G V+++ + N  
Sbjct: 172 NGYSQLGNGNTIQGT---TPVQVCMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCG 228

Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
           ++G  T  N   P  +  +L++  VV I+AG    +AL        VY  G    G+LG 
Sbjct: 229 QVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALT---DNGHVYGWGYNGTGQLGL 285

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
           G+  ++  P      +L+  QP+    V  G  H   +   G +  WG   +G LG GN+
Sbjct: 286 GNTGNQLMP-----CRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNK 340

Query: 297 ECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGDVYSFG-----CGESASLGHNAI 348
             ++VP  V   + + +V A H       +   S+ G VY +G     C  S  L H   
Sbjct: 341 SNQTVPVKVGTNERMVEVTACHSTN---ISAAKSQSGQVYMWGLCRGQCLLSPHLTHFTC 397

Query: 349 AD 350
            D
Sbjct: 398 TD 399



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 12/205 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQAAAGAG 105
           Q   G  HS+A+TS G V+S+G N+ GQ+G GTT  +  PR +  SLQ   ++  +AG  
Sbjct: 202 QVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQT 261

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +M ++D G VY +G +  G+   G  G +L+  P  +   + I ++Q  +G   T  LS
Sbjct: 262 SSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFAQPICIIQVVLGYAHTLALS 319

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
            +G +Y +   +  +LG   + N   P   +GT E +  V++ A +   ++ A   SG  
Sbjct: 320 DQGVLYAWGANSHGQLGIGNKSNQTVPVK-VGTNERM--VEVTACHSTNISAAKSQSGQ- 375

Query: 226 VYSVG-----CGLGGKLGHGSRTDE 245
           VY  G     C L   L H + TD+
Sbjct: 376 VYMWGLCRGQCLLSPHLTHFTCTDD 400



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 21/215 (9%)

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L C   G  VYS G     +LG+G+      P  +   +LL+ + + VA G+ H+  +  
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTPVQV-CMELLSKKVIQVACGSHHSMALTS 215

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
           DG V +WG+   G +G G    +SVP KV  +L     + ++ G  ++  ++++G VY +
Sbjct: 216 DGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGW 275

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G   +  L       G GN    ++  +LV +          I +   +   AHT AL++
Sbjct: 276 GYNGTGQL-------GLGNTGNQLMPCRLVFAQP--------ICIIQVVLGYAHTLALSD 320

Query: 396 SGKLYAFGAGDKGQLGIELVNNQT---ERGNPERV 427
            G LYA+GA   GQLGI   +NQT   + G  ER+
Sbjct: 321 QGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNERM 355


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 178/399 (44%), Gaps = 42/399 (10%)

Query: 36  AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
           A E   R+     +AG  HS+ + + G V+S+G N+ GQLG G+T +   P P R  +  
Sbjct: 42  AAEGTSRQ--GSVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQN--PMPARVWRLF 97

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
            I    AG   ++ +   G V+++G ++ G+   G   ++ V +P  V  L N+  + A 
Sbjct: 98  SITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAP--VPGLTNVVAIAA- 154

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   + VL  +G V+ +      +LG  T    + P  +LG      V  IAAG  + L
Sbjct: 155 -GFSHSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGL---TGVKDIAAGNVHSL 210

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
           AL        +++ G  + G+LG G          +     +    V ++ G  H+ ++ 
Sbjct: 211 ALTADGR---LWTWGGNVDGQLGTGDLVGRSTAAALPGMTGV----VALSGGGSHSLILK 263

Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
            DG V +WG    G LG G+      P  V  L ++  + V  G   +  +  DG V+++
Sbjct: 264 MDGSVWSWGKNDAGQLGLGSVVSTPTPTQVPGLTEM--VAVTGGGQHSVALRVDGTVWAW 321

Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
           G    A LG     DG   +    L+P  VT L QV        L        H+ A+  
Sbjct: 322 GSNARAQLG-----DGTQTQR---LSPCQVTGLTQVKGVAAGGGL--------HSVAVKG 365

Query: 396 SGKLYAFGAGDKGQLG-----IELVNNQTERGNPERVDI 429
           +G+++A+G+  +GQ+G     ++LV   T R   ER D+
Sbjct: 366 NGEVWAWGSNSEGQVGDGTYLMKLVPT-TARVLVERADV 403



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 156/363 (42%), Gaps = 36/363 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V+S+G+N++GQLG GT      P P+  L    ++  AAG   +M+
Sbjct: 104 AGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGL--TNVVAIAAGFSHSMV 161

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+A+G ++ G+   G    +L      V+ L    V   A GN  +  L+ +GR
Sbjct: 162 LKADGTVWAWGLNAAGQLGDGTPTRRLTP----VQVLGLTGVKDIAAGNVHSLALTADGR 217

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
           ++T+    D +LG      D+        L  +  VV ++ G  + L L    S   V+S
Sbjct: 218 LWTWGGNVDGQLGT----GDLVGRSTAAALPGMTGVVALSGGGSHSLILKMDGS---VWS 270

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
            G    G+LG GS      P  +        + V V  G  H+  +  DG V  WG    
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVPGLT----EMVAVTGGGQHSVALRVDGTVWAWGSNAR 326

Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
             LG G +     P  V  L  VK +  A G   +  V  +G+V+++G      +G    
Sbjct: 327 AQLGDGTQTQRLSPCQVTGLTQVKGV-AAGGGLHSVAVKGNGEVWAWGSNSEGQVG---- 381

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            DG        L   + T+ + + ER   +S         HT AL   G  + +G   + 
Sbjct: 382 -DG------TYLMKLVPTTARVLVER-ADVSAG-----GGHTLALKPDGTAWGWGLNAQS 428

Query: 409 QLG 411
           QLG
Sbjct: 429 QLG 431



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 165/363 (45%), Gaps = 44/363 (12%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+AV   G V+++GSNS GQ+G GT   +  P   R L  +     +AG G T+ +   
Sbjct: 359 HSVAVKGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVL--VERADVSAGGGHTLALKPD 416

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G  + +G ++  +++ G   T     P  V +L  +  V A  G + +  L  +G V+  
Sbjct: 417 GTAWGWGLNA--QSQLGDGTTTARPLPVQVLNLTRVAAVSA--GTYHSLALKEDGTVW-- 470

Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            WG +    +G  T  N  +P  + GTL     + +A+G  + LAL+   S   V++ G 
Sbjct: 471 GWGANYWGAIGDGTALNRSQPVKVSGTLV---AMTVASGNFHSLALSVDGS---VWAWGD 524

Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG- 289
              G+LG G+ T  ++      F++ NL+ VV +AAG  H+  +  DG V  W WGR   
Sbjct: 525 NSLGQLGDGTVTPTRN----APFRVPNLEGVVSLAAGGEHSLALKADGTV--WVWGRQDT 578

Query: 290 CLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
           C    N      VP+ VQ L D  A+ V  G   + V+  DG ++++G      L     
Sbjct: 579 CADPENVGRVLRVPEQVQGLTD--AVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTF 636

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D         +TP  V  L      V+  S+ +       T AL   G  +A+G   +G
Sbjct: 637 TD--------RMTPARVDGLTG----VISFSVGSE-----QTLALKADGTAWAWGPNAQG 679

Query: 409 QLG 411
           QLG
Sbjct: 680 QLG 682



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 161/366 (43%), Gaps = 40/366 (10%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            +S+ +   G V S G+N+SGQLG GT      P P+  L   R I  A GA   + +   
Sbjct: 759  YSLGIALDGSVQSTGANASGQLGDGTLFPRAEPVPVIGLSECRAI--AGGATHGLALKTD 816

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G+V ++G ++  E E G   T    +P +V  L  +  +  A+G   +  L  +G V   
Sbjct: 817  GRVLSWGANA--EGELGDGTTVARRAPAVVGPLAGVLSI--AVGARHSLALLGDGSVQ-- 870

Query: 174  SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            +WG++   +LG  T  + V P  + G      V  IAAG  + LAL    +   V++ G 
Sbjct: 871  AWGSNIQGQLGDGTTVSRVLPVRVQGL---TGVAAIAAGDGFSLALKHDGT---VWAWGG 924

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG     D    R +   +   L  V  VAAG  H+  +  DG +  WG   YG 
Sbjct: 925  NTLGQLG-----DNTTLRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWAWGSNTYGE 979

Query: 291  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            LG G +  +  P  V +L  V A+    GD+ +  V+  G V+ +G  +   +G    ++
Sbjct: 980  LGDGTQARKLAPVQVTSLTGVSALDA--GDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSN 1037

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
             Q       L P  V  L         +++        H+ AL     ++A+G GD GQL
Sbjct: 1038 WQ-------LLPAQVPGLTSA------VAVAGG---GEHSLALLSDRSVWAWGHGDMGQL 1081

Query: 411  GIELVN 416
            G  + N
Sbjct: 1082 GTGMSN 1087



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 160/375 (42%), Gaps = 48/375 (12%)

Query: 44  ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
           E +   AG GH++A+   G  + +G N+  QLG GTT    RP P++ L   R+   +AG
Sbjct: 399 ERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTA--RPLPVQVLNLTRVAAVSAG 456

Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
              ++ + + G V+ +G + +G       GT L  S Q V+    +  +  A GNF +  
Sbjct: 457 TYHSLALKEDGTVWGWGANYWGAIG---DGTALNRS-QPVKVSGTLVAMTVASGNFHSLA 512

Query: 164 LSREGRVYTFSWGNDA--RLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           LS +G V+  +WG+++  +LG  T  P    P  +   LE   VV +AAG  + LAL   
Sbjct: 513 LSVDGSVW--AWGDNSLGQLGDGTVTPTRNAPFRVP-NLEG--VVSLAAGGEHSLALKAD 567

Query: 221 PSGMAVYSVG----CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
            +   V+  G    C     +G       +  R+ EQ Q L    V V AG  H+ V+  
Sbjct: 568 GT---VWVWGRQDTCADPENVG-------RVLRVPEQVQGLT-DAVAVRAGRCHSVVLRA 616

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           DG +  WG    G L  G       P  V  L  V  I  + G   T  +  DG  +++G
Sbjct: 617 DGTLWAWGRNAEGQLADGTFTDRMTPARVDGLTGV--ISFSVGSEQTLALKADGTAWAWG 674

Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
                 LG        G        P  V +L  V  R V +          H   L + 
Sbjct: 675 PNAQGQLG--------GGLSVPRTRPTQVPTLTDV--RTVAMGAV-------HALVLKDD 717

Query: 397 GKLYAFGAGDKGQLG 411
             L+A+G+  +GQ+G
Sbjct: 718 LTLWAWGSNAEGQVG 732



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 26/303 (8%)

Query: 47   QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
            +AIAG   H +A+ + G V S+G+N+ G+LG GTT     P  +  L G+  I  A GA 
Sbjct: 801  RAIAGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAPAVVGPLAGVLSI--AVGAR 858

Query: 106  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
             ++ +   G V A+G +  G+   G   ++++  P  V+ L  +  + A  G+ F+  L 
Sbjct: 859  HSLALLGDGSVQAWGSNIQGQLGDGTTVSRVL--PVRVQGLTGVAAIAA--GDGFSLALK 914

Query: 166  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             +G V+ +      +LG +T    + P   + T     V  +AAG  + LAL    +   
Sbjct: 915  HDGTVWAWGGNTLGQLGDNTTLRSLVP---VRTQALTGVTAVAAGRNHSLALKGDGT--- 968

Query: 226  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWG 284
            +++ G    G+LG G++  +  P      Q+ +L  V  + AG  H+  V   G+V  WG
Sbjct: 969  LWAWGSNTYGELGDGTQARKLAP-----VQVTSLTGVSALDAGDHHSLAVTSGGKV--WG 1021

Query: 285  WGR--YGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
            WGR  +G +G G     + +P  V  L    A+ VA G   +  +  D  V+++G G+  
Sbjct: 1022 WGRNQFGQVGKGVKSNWQLLPAQVPGLT--SAVAVAGGGEHSLALLSDRSVWAWGHGDMG 1079

Query: 342  SLG 344
             LG
Sbjct: 1080 QLG 1082



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 163/406 (40%), Gaps = 70/406 (17%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
             ++A+ + G  +++G N+ GQLG G +    RP  + +L  +R +  A GA   +++ D 
Sbjct: 660  QTLALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQVPTLTDVRTV--AMGAVHALVLKDD 717

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
              ++A+G ++ G+   G    +       + + + +     A    ++  ++ +G V + 
Sbjct: 718  LTLWAWGSNAEGQVGDGALDWQAAPVRSGLAASRGL-----AAATQYSLGIALDGSVQST 772

Query: 174  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
                  +LG  T     EP P++G  E      IA G  + LAL        V S G   
Sbjct: 773  GANASGQLGDGTLFPRAEPVPVIGLSE---CRAIAGGATHGLALKTDGR---VLSWGANA 826

Query: 234  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
             G+LG G+    + P ++     +    + +A GA H+  +  DG V  WG    G LG 
Sbjct: 827  EGELGDGTTVARRAPAVVGPLAGV----LSIAVGARHSLALLGDGSVQAWGSNIQGQLGD 882

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN------- 346
            G      +P  VQ L  V AI  A GD  +  +  DG V+++G      LG N       
Sbjct: 883  GTTVSRVLPVRVQGLTGVAAI--AAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLV 940

Query: 347  -----------AIADGQGNR------------------------HANVLTPQLVTSLKQV 371
                       A+A G+ +                          A  L P  VTSL  V
Sbjct: 941  PVRTQALTGVTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQVTSLTGV 1000

Query: 372  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
            +              + H+ A+T  GK++ +G    GQ+G  + +N
Sbjct: 1001 SALDAG---------DHHSLAVTSGGKVWGWGRNQFGQVGKGVKSN 1037



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 156/361 (43%), Gaps = 41/361 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 111
           HS+A++  G V+++G NS GQLG GT     R  P R  +L+G+  +  AAG   ++ + 
Sbjct: 509 HSLALSVDGSVWAWGDNSLGQLGDGTVTPT-RNAPFRVPNLEGV--VSLAAGGEHSLALK 565

Query: 112 DAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
             G V+ +G+ D+  + E      +++  P+ V+ L +   V+A  G   + VL  +G +
Sbjct: 566 ADGTVWVWGRQDTCADPE---NVGRVLRVPEQVQGLTDAVAVRA--GRCHSVVLRADGTL 620

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
           + +    + +L   T  + + P  + G      V+  + G    LAL    +    ++ G
Sbjct: 621 WAWGRNAEGQLADGTFTDRMTPARVDGL---TGVISFSVGSEQTLALKADGT---AWAWG 674

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG G       P  +     +      VA GA HA V+  D  +  WG    G 
Sbjct: 675 PNAQGQLGGGLSVPRTRPTQVPTLTDVR----TVAMGAVHALVLKDDLTLWAWGSNAEGQ 730

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           +G G  + ++ P V   L   + +  AT    +  ++ DG V S G   S  LG     D
Sbjct: 731 VGDGALDWQAAP-VRSGLAASRGLAAAT--QYSLGIALDGSVQSTGANASGQLG-----D 782

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
           G     A    P  V  L +   R +    T       H  AL   G++ ++GA  +G+L
Sbjct: 783 GTLFPRAE---PVPVIGLSEC--RAIAGGAT-------HGLALKTDGRVLSWGANAEGEL 830

Query: 411 G 411
           G
Sbjct: 831 G 831



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 31/257 (12%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            HS+A+   G V ++GSN  GQLG GTT     P  ++ L G+  I  AAG G ++ +   
Sbjct: 859  HSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVAAI--AAGDGFSLALKHD 916

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G V+A+G ++ G+         LV  P   ++L  +  V A  G   +  L  +G ++  
Sbjct: 917  GTVWAWGGNTLGQLGDNTTLRSLV--PVRTQALTGVTAVAA--GRNHSLALKGDGTLW-- 970

Query: 174  SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
            +WG++    LG  T+   + P  +  +L  +  +   AG  + LA+    SG  V+  G 
Sbjct: 971  AWGSNTYGELGDGTQARKLAPVQVT-SLTGVSALD--AGDHHSLAVT---SGGKVWGWGR 1024

Query: 232  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ------PVVVAAGAWHAAVVGQDGRVCTWGW 285
               G++G G +++         +QLL  Q       V VA G  H+  +  D  V  WG 
Sbjct: 1025 NQFGQVGKGVKSN---------WQLLPAQVPGLTSAVAVAGGGEHSLALLSDRSVWAWGH 1075

Query: 286  GRYGCLGHGNEECESVP 302
            G  G LG G       P
Sbjct: 1076 GDMGQLGTGMSNLRLSP 1092



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 13/192 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG G S+A+   G V+++G N+ GQLG  TT     P   ++L G+  +  AAG   ++ 
Sbjct: 905  AGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAV--AAGRNHSLA 962

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G ++A+G +++GE   G Q  KL  +P  V SL  +  + A  G+  +  ++  G+
Sbjct: 963  LKGDGTLWAWGSNTYGELGDGTQARKL--APVQVTSLTGVSALDA--GDHHSLAVTSGGK 1018

Query: 170  VYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            V+ +      ++G   + N  + P  + G       V +A G  + LAL    S   V++
Sbjct: 1019 VWGWGRNQFGQVGKGVKSNWQLLPAQVPGLTS---AVAVAGGGEHSLALLSDRS---VWA 1072

Query: 229  VGCGLGGKLGHG 240
             G G  G+LG G
Sbjct: 1073 WGHGDMGQLGTG 1084


>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 17/273 (6%)

Query: 43  RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           RE  + IA G  H++ +T  G VY+ G N+ GQLG  + E+ +   P+        +  +
Sbjct: 112 REMLKGIACGGAHTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVRIPKEAMHIS 170

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG   + +++  G++Y +G +S G+   G +  K V  P  V+SL  I + +AA+G+  +
Sbjct: 171 AGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHS 230

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-------PNDVEPHP-LLGTLENIPVVQIAAGYCY 213
             ++  G V+++  G   RLGH  E        +  E  P L+  LE I V  +AAG   
Sbjct: 231 IAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAG--- 287

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           +L  AC     AVY  G     ++  G       P LI    LL+ +   VA G +H  V
Sbjct: 288 MLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLIS--TLLDCEE--VACGGYHTCV 343

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
           + + G + +WG    GCLG+G+     +P+ V+
Sbjct: 344 LTKGGDLYSWGSNENGCLGNGSTSVSHLPERVE 376



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 22/294 (7%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG G  + +W P P  S     +   A G   T+ ++++G+VYA G ++FG 
Sbjct: 85  WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG- 143

Query: 127 AEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
            + G+   K   T P  V   K    + A   +  + V++ +G +Y +   ++ +LG   
Sbjct: 144 -QLGISDEKRFSTEPVEVRIPKEAMHISAGYNH--SCVVTADGELYMWGVNSNGQLGLGK 200

Query: 186 EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 240
           +       P  + +L+ I + + A G  + +A+A    G  V+S G G  G+LGHG    
Sbjct: 201 KSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVA---DGGEVFSWGDGRSGRLGHGHEST 257

Query: 241 -----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
                  T E  PRLI++ + + ++   VAAG  H+A V ++G V  +G      +  G 
Sbjct: 258 FLGFLKSTSEHTPRLIKELEGIKVKH--VAAGMLHSACVDENGAVYIFGERATNRVSFGE 315

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
               + P ++  L D +   VA G Y T V+++ GD+YS+G  E+  LG+ + +
Sbjct: 316 ANKATTPSLISTLLDCE--EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTS 367



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 146/341 (42%), Gaps = 58/341 (17%)

Query: 109 LISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
             SD+G+ +   +G   FG    G   ++   SP    S     +   A G   T  L+ 
Sbjct: 73  FASDSGKRFGAVWGNGDFGRLGLGNLDSQW--SPVPCSSFDREMLKGIACGGAHTLFLTE 130

Query: 167 EGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALA 218
            GRVY     N  +LG        TEP +V           IP   + I+AGY +   + 
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR----------IPKEAMHISAGYNHSCVVT 180

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQD 277
                  +Y  G    G+LG G ++  K   L  +   L+   +  AA G+ H+  V   
Sbjct: 181 ADGE---LYMWGVNSNGQLGLGKKS-AKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADG 236

Query: 278 GRVCTWGWGRYGCLGHGNEEC---------ESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
           G V +WG GR G LGHG+E           E  P++++ L  +K  HVA G   +  V E
Sbjct: 237 GEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDE 296

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
           +G VY FG  E A+   N ++ G+ N+     TP L+++L    E               
Sbjct: 297 NGAVYIFG--ERAT---NRVSFGEANK---ATTPSLISTLLDCEEVACG---------GY 339

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVD 428
           HT  LT+ G LY++G+ + G LG    N  T   + PERV+
Sbjct: 340 HTCVLTKGGDLYSWGSNENGCLG----NGSTSVSHLPERVE 376


>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
          Length = 333

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 17  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 76

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 77  GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 134

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 135 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 194

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 195 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 251

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 252 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 304

Query: 331 DVYSFG 336
              S+G
Sbjct: 305 STISWG 310



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 44/281 (15%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 63  AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 121

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 122 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 180

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 181 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 238

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 239 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 289

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES 300
            +        + +V  D    +WG    +G LG+G+ + +S
Sbjct: 290 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKS 327



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 16/219 (7%)

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           V  + +G C   +L     G  ++S G    G+LGHG     + PRLIE    L+ + +V
Sbjct: 6   VRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLIEG---LSHEVIV 61

Query: 264 VAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDY 321
            AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + + + I  +A G  
Sbjct: 62  SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMACGAE 120

Query: 322 TTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V    +  +    
Sbjct: 121 FSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 180

Query: 378 ISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
           + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 181 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 219



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 20  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 78

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 79  ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 131

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 132 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 191

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 192 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 243

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 244 QIYAGYTC-----SFAVSEVGGLFFWGA 266



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 18/98 (18%)

Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
           + +++ +G ++S+G  E   LGH     G   R   V  P+L+  L   +E +V  +   
Sbjct: 18  SLLITTEGKLWSWGRNEKGQLGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGR 67

Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
           +     HT ALTE+G ++AFG    GQLG+    NQT+
Sbjct: 68  N-----HTLALTETGSVFAFGENKMGQLGL---GNQTD 97


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 15/265 (5%)

Query: 63  VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
           V+ + G+  SG+LG G       P+ I   +  +++  + G   + + ++A  V  +G  
Sbjct: 36  VIIAVGNGESGRLGLGNENCCNIPKRINIKK--KVVGVSCGDEHSAVFTEANTVLTWGNG 93

Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
           + G    G + ++  T P L E      V Q + G+ +TAVL+  G+V+TF  G+  +LG
Sbjct: 94  TGGRLGTGDEISR--TQPVLPEH----KVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLG 147

Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
           H  + N + P  L+  L+   VV ++ G  ++ AL  +     V++ GCG  G+LGHGS 
Sbjct: 148 HGNDSNQLVP-KLVEELDTERVVSLSCGADHMAALNIEGD---VFTWGCGGNGRLGHGSE 203

Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESV 301
            D K P L++      L  + V  G +H  V   DG +  WGW  YG  G G + E +  
Sbjct: 204 RDSKKPVLVKGMN--GLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLT 261

Query: 302 PKVVQALNDVKAIHVATGDYTTFVV 326
           P +V+ L   + + VA G+  T  +
Sbjct: 262 PVLVEQLRGKRVLMVACGESHTMAL 286



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 55/279 (19%)

Query: 173 FSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-------------CYL--- 214
           FSWG  N  +LGHH E N   P  +   L   P V IA G              C +   
Sbjct: 3   FSWGLGNGGQLGHHDEENGSFPREV-SALRKKPSVIIAVGNGESGRLGLGNENCCNIPKR 61

Query: 215 -------LALACQPSGMAVYSV-------GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                  + ++C     AV++        G G GG+LG G       P L E       +
Sbjct: 62  INIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQPVLPEH------K 115

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
              ++ G+   AV+   G+V T+G G YG LGHGN+  + VPK+V+ L+  + + ++ G 
Sbjct: 116 VAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGA 175

Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
                ++ +GDV+++GCG +  LGH +  D +         P LV  +  +    V+   
Sbjct: 176 DHMAALNIEGDVFTWGCGGNGRLGHGSERDSK--------KPVLVKGMNGLVALTVECG- 226

Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL-VNNQ 418
                   H    T  G+LY +G    GQ G+ L V NQ
Sbjct: 227 ------GYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQ 259



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q   G   +  +T  G V++FG  S G+LGHG    +  P+ +  L   R++  + GA 
Sbjct: 117 AQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGAD 176

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
               ++  G V+ +G    G   +G +  +    P LV+ +  +  +    G +   V +
Sbjct: 177 HMAALNIEGDVFTWGCGGNGRLGHGSE--RDSKKPVLVKGMNGLVALTVECGGYHMGVTT 234

Query: 166 REGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            +G +Y + W       LG H E N + P  L+  L    V+ +A G  + +AL    S
Sbjct: 235 LDGELYMWGWNVYGQCGLGLHVE-NQLTP-VLVEQLRGKRVLMVACGESHTMALVSNNS 291



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 87/207 (42%), Gaps = 45/207 (21%)

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           V+S G G GG+LGH    +   PR   +   L  +P V+ A       VG          
Sbjct: 2   VFSWGLGNGGQLGHHDEENGSFPR---EVSALRKKPSVIIA-------VGN--------- 42

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
           G  G LG GNE C ++PK +      K + V+ GD  + V +E   V ++G G    LG 
Sbjct: 43  GESGRLGLGNENCCNIPKRINI--KKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLG- 99

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
                G        + P+          +V QIS  +   W A    LT +GK++ FG G
Sbjct: 100 ----TGDEISRTQPVLPE---------HKVAQISCGSD--WTA---VLTLAGKVFTFGVG 141

Query: 406 DKGQLG-----IELVNNQTERGNPERV 427
             G+LG      +LV    E  + ERV
Sbjct: 142 SYGKLGHGNDSNQLVPKLVEELDTERV 168


>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
          Length = 448

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 87  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 146

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 147 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 204

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 205 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 264

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 265 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 321

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 322 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 374

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 375 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 423



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 133 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 191

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 192 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 250

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 251 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 308

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++   L   +
Sbjct: 309 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQ--DLCGWR 357

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
              +A G   + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 358 IRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 416

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 417 MGYSHSLVIARD 428



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 65  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 122

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 123 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 178

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 179 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 238

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 239 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 289



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 47/270 (17%)

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           + +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL   
Sbjct: 88  SLLITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 146

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
            S   V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 147 GS---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 199

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 200 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 259

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 260 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 311

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             QI    +      +FA++E G L+ +GA
Sbjct: 312 ASQIYAGYTC-----SFAVSEVGGLFFWGA 336



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 310 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 363

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 364 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 423

Query: 163 VLSRE 167
           V++R+
Sbjct: 424 VIARD 428



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 63  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 107

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 108 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 152

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 153 GENKMGQLGL---GNQTD 167


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 23  QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 82

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G  + G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 83  HSFALSLSGAVFGWGMNNAG--QLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 141 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197

Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
           +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 226



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P   
Sbjct: 7   VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR- 65

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   +
Sbjct: 66  VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119

Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
           LL  Q VV ++ G  H AV+ + G V T+G G  G LGHG+   E  P+ V  L   +  
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVT 179

Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
            +A G  +T   V   G +Y+FGCG    LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 23/182 (12%)

Query: 248 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 305
           PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V
Sbjct: 10  PRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV 66

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
           ++L  +    VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q  
Sbjct: 67  RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
                   +VV IS         HT  LT+SG ++ FGAG  GQLG   +N++    NP 
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---NPR 168

Query: 426 RV 427
           RV
Sbjct: 169 RV 170



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 79  TTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
           TTE+    PR I+ L    I+Q + G    + ++  GQ + +GK+S G+   G +     
Sbjct: 2   TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-Q 60

Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
           TSPQ V SL+ I + Q A G   +  LS  G V+ +   N  +LG   E  D E    + 
Sbjct: 61  TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVK 119

Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
            L    VV I+ G  +   L    SG  V++ G G  G+LGHGS  DE +PR +   +L+
Sbjct: 120 LLRTQKVVYISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHGSMNDEVNPRRV--LELM 174

Query: 258 NLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
             +   +A G  H  A V   G +  +G G  G LG G   N +C S  K
Sbjct: 175 GSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 28/232 (12%)

Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 240
           T  + V    L+  L    ++Q++ G  + LALA        ++ G    G+LG G    
Sbjct: 2   TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFP 58

Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
           S+T  +  R +E   L       VAAG  H+  +   G V  WG    G LG  +E+   
Sbjct: 59  SQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 113

Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
            P  V+ L   K ++++ G+  T V+++ G V++FG G    LGH ++ D    R     
Sbjct: 114 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--- 170

Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
                  L+ +   V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 171 -------LELMGSEVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+  +G    ++  +P+ V  L    V Q A G   T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 161/348 (46%), Gaps = 28/348 (8%)

Query: 48  AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAG 105
           AIA G  H++ +T  G VY+ G N  GQLG  + ++ +   P+  S    +II  AAG  
Sbjct: 70  AIACGGAHTLFLTESGCVYAAGLNDFGQLGV-SVDKNYTTEPLEVSALPKKIIHIAAGYY 128

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  I+  G++Y +GK+S G+   G +    V+ P  VE L  I +   A+G+  +   +
Sbjct: 129 HSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAAT 188

Query: 166 REGRVYTFSWGNDARLGHHTEPN-------DVEPHP-LLGTLENIPVVQIAAGYCYLLAL 217
            +G   ++  G   RLGH  E +         E  P L+  LE I V  +AAG   LL  
Sbjct: 189 DQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAG---LLHS 245

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
           AC     +V+  G     K G     +   P +I +          VA G +H  V+   
Sbjct: 246 ACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQ----VACGGYHTCVISSS 301

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
           G + TWG    GCLG G  E    P+ ++   +      V+ G   T  +SE G+V+++G
Sbjct: 302 GELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISE-GNVFTWG 360

Query: 337 CGES----ASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQIS 379
            G S    +  GH++    GQG+   + + P++V   + V  R +Q+S
Sbjct: 361 WGGSYGTFSDDGHSSGGQLGQGS-DVDHIKPKMVEFEESV--RALQVS 405



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 19/288 (6%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG G+ E +WRP    +     ++  A G   T+ ++++G VYA G + FG 
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFG- 96

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHT 185
            + GV   K  T+  L  S     ++  A G + +A ++ +G +Y +   ++ +LG    
Sbjct: 97  -QLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKK 155

Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--- 242
             N V     +  L  I +  +A G  + +A   Q   +   S G G  G+LGHG     
Sbjct: 156 AANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEAL---SWGAGGSGRLGHGHESSL 212

Query: 243 ------TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
                 + E  PRLI + + + ++   VAAG  H+A + ++G V  +G       G    
Sbjct: 213 LGFFRTSSEYRPRLIRRLEGIKVKN--VAAGLLHSACIDENGSVFIFGERAMDKFGFREA 270

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           +  + P ++  L   K   VA G Y T V+S  G+++++G  E+  LG
Sbjct: 271 KNATAPSMISELPYSK--QVACGGYHTCVISSSGELFTWGSNENGCLG 316



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 123/301 (40%), Gaps = 31/301 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRT 107
           AG  HS A+T+ G +Y +G NS+GQLG G         P  +  L GI I   A G+  +
Sbjct: 125 AGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHS 184

Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLVESLKNIFVVQAAIGNFF 160
           +  +D G+  ++G    G   +G + + L          P+L+  L+ I V   A G   
Sbjct: 185 VAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLH 244

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALAC 219
           +A +   G V+ F      + G     N   P      +  +P   Q+A G  +   ++ 
Sbjct: 245 SACIDENGSVFIFGERAMDKFGFREAKNATAP----SMISELPYSKQVACGGYHTCVIS- 299

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
             S   +++ G    G LG G       P  IE     +  PV   +  W       +G 
Sbjct: 300 --SSGELFTWGSNENGCLGMGFMETIHFPERIE--GPFSKNPVSQVSCGWKHTAAISEGN 355

Query: 280 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           V TWGW G YG            LG G++     PK+V+    V+A+ V+ G   T  + 
Sbjct: 356 VFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAIL 415

Query: 328 E 328
           E
Sbjct: 416 E 416



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 54/326 (16%)

Query: 124 FGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           +G  ++G  G   + S   P +  +  +  +V  A G   T  L+  G VY     +  +
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQ 97

Query: 181 LG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
           LG      + TEP +V   P         ++ IAAGY +  A+        +Y  G    
Sbjct: 98  LGVSVDKNYTTEPLEVSALPK-------KIIHIAAGYYHSAAITADGE---LYMWGKNSN 147

Query: 235 GKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           G+LG G +       P  +E    ++++  +VA G+ H+      G   +WG G  G LG
Sbjct: 148 GQLGLGKKAANAVSVPSKVECLNGISIK--MVALGSEHSVAATDQGEALSWGAGGSGRLG 205

Query: 293 HGNEEC---------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
           HG+E           E  P++++ L  +K  +VA G   +  + E+G V+ FG       
Sbjct: 206 HGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFG------- 258

Query: 344 GHNAIADGQGNRHA-NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
                 D  G R A N   P +++ L    +               HT  ++ SG+L+ +
Sbjct: 259 --ERAMDKFGFREAKNATAPSMISELPYSKQVACG---------GYHTCVISSSGELFTW 307

Query: 403 GAGDKGQLGIELVNNQTERGNPERVD 428
           G+ + G LG+  +        PER++
Sbjct: 308 GSNENGCLGMGFMETIH---FPERIE 330



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 20/275 (7%)

Query: 152 VQAAIGNFFTAVLSREGRVYTFS--WGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
           +Q+ +G  F   LS       F+  WGN    RLG  +  +   P  +    ++  +V I
Sbjct: 13  LQSKLGLGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRP-AVCSAFDHHSLVAI 71

Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
           A G  + L L    SG  VY+ G    G+LG     D+ +     +   L  + + +AAG
Sbjct: 72  ACGGAHTLFLT--ESG-CVYAAGLNDFGQLG--VSVDKNYTTEPLEVSALPKKIIHIAAG 126

Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTFV 325
            +H+A +  DG +  WG    G LG G +     SVP  V+ LN +    VA G   +  
Sbjct: 127 YYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVA 186

Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQGN-RHANVLTPQLVTSLKQVNERVVQISLTNSI 384
            ++ G+  S+G G S  LGH   +   G  R ++   P+L+  L+ +  + V   L    
Sbjct: 187 ATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLL--- 243

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 419
               H+  + E+G ++ FG     + G     N T
Sbjct: 244 ----HSACIDENGSVFIFGERAMDKFGFREAKNAT 274


>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
          Length = 522

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 85  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 205 VLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 262

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   +  
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 433

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +   
Sbjct: 434 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 487

Query: 375 VVQISLTNSI 384
            V +  ++S+
Sbjct: 488 QVAMGYSHSL 497



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 265

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 325 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 382

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 383 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 433

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 434 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 491 MGYSHSLVIARD 502



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V+AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 197 EG---LSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTETGS 222

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 374 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 422

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 423 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 482

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 483 GIFSEQVAMGYSHSLVIARD 502



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVLAACGRN-----HTLALTETGSVFAF 226

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 67/383 (17%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L    I+  + G   T+ +
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQ---LVESLKNIFVVQAAIGNFFTAVLSR 166
           +D GQVYA+G DS G+   G+ G++  +  P+    +   KNI + +           SR
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRKSIFMPVDKNIRIKECK------KTASR 151

Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
           +  V T               +++ P   L     + V                 S   V
Sbjct: 152 KSWVSTLC-------------SELAPDSHLAESGQVAV-----------------SASEV 181

Query: 227 YSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
           +  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+   G +  WG 
Sbjct: 182 FCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 239

Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
            ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++FG G    LGH
Sbjct: 240 NKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 299

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGA 404
           N+ +     R    L   +VT          QI+         HT A    SG++Y+FG 
Sbjct: 300 NSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFVPSSGRIYSFGL 344

Query: 405 GDKGQLGIELVNNQ----TERGN 423
           G  GQLG    +N+    T +GN
Sbjct: 345 GGNGQLGTGSTSNRKSPFTVKGN 367



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 18/252 (7%)

Query: 4   KRAIFKPMTEAERQDLKQKCGG--SWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK 61
           +++IF P+ +  R    +K     SW   L        C        +A  G  +AV S 
Sbjct: 129 RKSIFMPVDKNIRIKECKKTASRKSWVSTL--------CSELAPDSHLAESGQ-VAV-SA 178

Query: 62  GVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
             V+ +G N  GQLG G   +++  P+ I+SL GI  +Q AAG   + +++ +G ++ +G
Sbjct: 179 SEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 238

Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
           ++ FG+     +  + V  P L++SL++  +V    G   TA L++EG V+TF  G   +
Sbjct: 239 RNKFGQLGLNDENDRYV--PYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 296

Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           LGH++  +++ P  +   + +I V QIA G  +  A    PS   +YS G G  G+LG G
Sbjct: 297 LGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTG 353

Query: 241 SRTDEKHPRLIE 252
           S ++ K P  ++
Sbjct: 354 STSNRKSPFTVK 365



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
           Q  AG  HS  +T  G ++ +G N  GQLG     + + P  ++SL+  +I+    G   
Sbjct: 217 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDH 276

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
           T  ++  G V+ FG   +G+   G   T    +P+ V  L    V Q A G   T A + 
Sbjct: 277 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 334

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
             GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 335 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 366



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 92/219 (42%), Gaps = 35/219 (15%)

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
            VY+ GC   G+LGH     EK  +  EQ   L+ Q +V V+ G  H   +   G+V  W
Sbjct: 54  TVYTCGCNDLGQLGH-----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAW 108

Query: 284 GWGRYGCLG-HGNEECESVPKVVQALNDVKAIHV----ATGDYTTFV------------V 326
           G    G LG  G+EEC  VP+    +   K I +     T    ++V            +
Sbjct: 109 GLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHL 168

Query: 327 SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
           +E G V +    E    G N     G G       +PQL+ SL       + I       
Sbjct: 169 AESGQV-AVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL-------LGIPFMQVAA 220

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 424
             AH+F LT SG ++ +G    GQLG+   N++ +R  P
Sbjct: 221 GGAHSFVLTLSGAIFGWGRNKFGQLGL---NDENDRYVP 256



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 283 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCGE-----AHTLALNDKGQVY 106

Query: 401 AFGAGDKGQLGI 412
           A+G    GQLG+
Sbjct: 107 AWGLDSDGQLGL 118



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 6/112 (5%)

Query: 235 GKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
           G+LG G   +E    PR  + F  +N +   V  G  H   V  DG V T G    G LG
Sbjct: 10  GQLGLGGIDEEIVLEPRKSDFF--INKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
           H  E+    P+ V AL+    + V+ G+  T  +++ G VY++G      LG
Sbjct: 68  H--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 23/320 (7%)

Query: 43  RENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQA 100
           R+N ++I AG  HS  +   G VY++G    GQLGH   TE E  P  +  ++       
Sbjct: 35  RKNVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAV 94

Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNF 159
           A G   T++++D G +Y +G++  G+   G    K   SP L++S  N+  V+  A G F
Sbjct: 95  ACGRNHTVVVTDNGLIYTWGENKAGQ--LGTGDLKSSNSPVLIDSALNLPSVLSIACGEF 152

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            T  +  EG ++++      +LGH        P  ++G  + I  ++ A G  + L L  
Sbjct: 153 HTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKI-CIRAACGGQHTLVLT- 210

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
                 +Y+ G    G+LG  +R+D+    P +++  +      V+   G  H+  + ++
Sbjct: 211 --DANKIYAWGSNAYGQLGL-NRSDKAVLQPDIVDHLRRSGACHVL--CGYSHSMALMKN 265

Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGD----- 331
            ++ TWG    G LG G+     VP++V AL  V+   +A G D+    V+++ +     
Sbjct: 266 EQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPP 325

Query: 332 ---VYSFGCGESASLGHNAI 348
              VYS+G GE   LGHN +
Sbjct: 326 LEHVYSWGRGEEGQLGHNEL 345



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 18/213 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H++A+  +G ++S+G N  GQLGHG T+  + P  +  +     I+AA G   T+++
Sbjct: 150 GEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVL 209

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +DA ++YA+G +++G+     +  K V  P +V+ L+         G   +  L +  ++
Sbjct: 210 TDANKIYAWGSNAYGQLGLN-RSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQI 268

Query: 171 YTFSWG-NDA---RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQ----- 220
           YT  WG ND     LGH+T      P P L+  L ++ V QIA GY + +A         
Sbjct: 269 YT--WGRNDCGQLGLGHYTH----SPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG 322

Query: 221 -PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
            P    VYS G G  G+LGH        PR++E
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 32/305 (10%)

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESL------KNIFVVQAAIGNFFTAVLSREGR 169
           VY++GK+ +G+   G+  T  V  P  + SL      KN+  + A  G   +AV++ +G 
Sbjct: 1   VYSWGKNKYGQ--LGLGHTNNVPLPTGILSLSDPLNRKNVRSIGA--GKSHSAVIAEDGD 56

Query: 170 VYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           VYT+  G + +LGH      ++EPH ++  +EN     +A G  + + +    +G+ +Y+
Sbjct: 57  VYTWGRGWEGQLGHDVVTEIELEPH-IVPKMENRGSSAVACGRNHTVVVT--DNGL-IYT 112

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
            G    G+LG G       P LI+    LNL  V+ +A G +H   +  +G + +WG  +
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDS--ALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LGHGN +    P  V  +     I  A G   T V+++   +Y++G      LG N 
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLN- 229

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
                      VL P +V  L++     V    +       H+ AL ++ ++Y +G  D 
Sbjct: 230 ------RSDKAVLQPDIVDHLRRSGACHVLCGYS-------HSMALMKNEQIYTWGRNDC 276

Query: 408 GQLGI 412
           GQLG+
Sbjct: 277 GQLGL 281



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 34/372 (9%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWRPRPIRSL------QGIRIIQAAAGAGRTMLISDAGQVY 117
           VYS+G N  GQLG G T     P  I SL      + +R I   AG   + +I++ G VY
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSI--GAGKSHSAVIAEDGDVY 58

Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
            +G+   G+  + V  T++   P +V  ++N      A G   T V++  G +YT+    
Sbjct: 59  TWGRGWEGQLGHDVV-TEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENK 117

Query: 178 DARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
             +LG     +   P  L+ +  N+P V+ IA G  + +A+  + +   ++S G    G+
Sbjct: 118 AGQLGTGDLKSSNSP-VLIDSALNLPSVLSIACGEFHTVAICIEGT---IWSWGRNQCGQ 173

Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGN 295
           LGHG+      P  +    +     +  A G  H  V+    ++  WG   YG LG + +
Sbjct: 174 LGHGNTKTCYFPTQV--VGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRS 231

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---CGESASLGHNAIADGQ 352
           ++    P +V  L    A HV  G   +  + ++  +Y++G   CG+   LGH       
Sbjct: 232 DKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQ-LGLGH------- 283

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF--ALTESGKLYAFGAGDKGQL 410
              + +   P+LVT+L+ V  + +     + + + A      +     +Y++G G++GQL
Sbjct: 284 ---YTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQL 340

Query: 411 G-IELVNNQTER 421
           G  EL++  T R
Sbjct: 341 GHNELLSRCTPR 352



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 21/276 (7%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAA 101
           R +S    G  H++ VT  G++Y++G N +GQLG G  +    P  I S L    ++  A
Sbjct: 89  RGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIA 148

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
            G   T+ I   G ++++G++  G+  +G   TK    P  V  +     ++AA G   T
Sbjct: 149 CGEFHTVAICIEGTIWSWGRNQCGQLGHG--NTKTCYFPTQVVGMAKKICIRAACGGQHT 206

Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            VL+   ++Y  +WG++A  +LG +     V    ++  L       +  GY + +AL  
Sbjct: 207 LVLTDANKIY--AWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM- 263

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-- 277
                 +Y+ G    G+LG G  T    P L+   + + +Q   +A G  H      D  
Sbjct: 264 --KNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQ--IACGYDHCVAFVADEV 319

Query: 278 -------GRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
                    V +WG G  G LGH        P++V+
Sbjct: 320 EPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 24/321 (7%)

Query: 42  RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQ 99
           R +   AIA G  H++ +T  G VY+ G N  GQLG  +  + +   P+    +  +++Q
Sbjct: 63  RNKTLNAIACGGAHTLFLTEDGCVYATGLNDFGQLGV-SESKHYSVEPLCVFGEEKKVVQ 121

Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
            +AG   +  I+  G++Y +GK++ G+   G +   +V  P  VE LK I +  AA+G+ 
Sbjct: 122 ISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSE 181

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDV-------EPHP-LLGTLENIPVVQIAAGY 211
            +  +S  G  +++  G   RLGH  E + +       E  P L+  LE I V  +AAG 
Sbjct: 182 HSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAG- 240

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
             LL  AC      V+  G     KL     +D   P LI +          VA G +H 
Sbjct: 241 --LLNSACTDENGCVFVFGERGIEKLRLKEMSDATKPSLISELP----SSKEVACGGYHT 294

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDG 330
            V+   G + TWG    GCLG G+ +   +P+ VQ          V+ G   T  +SE G
Sbjct: 295 CVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISE-G 353

Query: 331 DVYSFGCGES----ASLGHNA 347
            V+++G G S    + +GH++
Sbjct: 354 RVFTWGWGGSNGTFSEVGHSS 374



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 143/340 (42%), Gaps = 44/340 (12%)

Query: 90  RSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE 144
           RS   + +   A G G        DAG+ +A     +G  +YG  G   + S   P +  
Sbjct: 4   RSFSKLHLSLRAPGLGFPTRSFSRDAGKRFA---ALWGNGDYGRLGLGNLDSQWKPVVCP 60

Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIP 203
           + +N  +   A G   T  L+ +G VY     +  +LG   ++   VEP  + G  E   
Sbjct: 61  AFRNKTLNAIACGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFG--EEKK 118

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQP 261
           VVQI+AGY +  A+        +Y  G    G+LG G R       P  +E  + +N++ 
Sbjct: 119 VVQISAGYNHSCAITVDGE---LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIK- 174

Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---------ESVPKVVQALNDVK 312
            + A G+ H+  +   G   +WG G  G LGHG+E           E  P++++ L  +K
Sbjct: 175 -MAALGSEHSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIK 233

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
             +VA G   +    E+G V+ FG           I   +    ++   P L++ L    
Sbjct: 234 VKYVAAGLLNSACTDENGCVFVFG--------ERGIEKLRLKEMSDATKPSLISELPSSK 285

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
           E               HT  LT SG+LY +G+ + G LGI
Sbjct: 286 EVACG---------GYHTCVLTNSGELYTWGSNENGCLGI 316



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 133/296 (44%), Gaps = 33/296 (11%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGA 104
           Q  AG  HS A+T  G +Y +G N+SGQLG G       P P  +  L+GI I  AA G+
Sbjct: 121 QISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGS 180

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLVESLKNIFVVQAAIG 157
             ++ ISD G  +++G    G   +G + + L         +P+L++ L+ I V   A G
Sbjct: 181 EHSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAG 240

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
              +A     G V+ F      +L    E +D     L+  L +   V     +  +L  
Sbjct: 241 LLNSACTDENGCVFVFGERGIEKL-RLKEMSDATKPSLISELPSSKEVACGGYHTCVLTN 299

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVG 275
           + +     +Y+ G    G LG GS +D  H  L E+ Q   L+  V  V+ G  H A + 
Sbjct: 300 SGE-----LYTWGSNENGCLGIGS-SDVIH--LPEKVQGPFLKSSVSQVSCGWKHTAAI- 350

Query: 276 QDGRVCTWGWG------------RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
            +GRV TWGWG              G LGHG++     P  V    DVKA+ V+ G
Sbjct: 351 SEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCG 406



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 38/351 (10%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG G  + +W+P    + +   +   A G   T+ +++ G VYA G + FG 
Sbjct: 37  WGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTEDGCVYATGLNDFG- 95

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
            + GV  +K  +   L    +   VVQ + G   +  ++ +G +Y +      +LG    
Sbjct: 96  -QLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGELYMWGKNTSGQLGLGKR 154

Query: 187 PNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-- 243
             ++ P P  +  L+ I +   A G  + +A++    G A +S G G+ G+LGHG  +  
Sbjct: 155 APNIVPLPTKVEYLKGINIKMAALGSEHSVAIS---DGGAAFSWGIGVSGRLGHGHESSV 211

Query: 244 -------DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
                   E  PRLI+  + + ++   VAAG  ++A   ++G  C + +G  G      +
Sbjct: 212 LGFFKSYSEYTPRLIKDLEGIKVK--YVAAGLLNSACTDENG--CVFVFGERGIEKLRLK 267

Query: 297 ECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
           E      P ++  L   K   VA G Y T V++  G++Y++G  E+  LG    +    +
Sbjct: 268 EMSDATKPSLISELPSSK--EVACGGYHTCVLTNSGELYTWGSNENGCLGIG--SSDVIH 323

Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               V  P L +S+ QV           S  W  HT A++E G+++ +G G
Sbjct: 324 LPEKVQGPFLKSSVSQV-----------SCGWK-HTAAISE-GRVFTWGWG 361


>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
          Length = 520

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 83  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 202

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 260

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 261 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   +  
Sbjct: 378 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 431

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +   
Sbjct: 432 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFTE 485

Query: 375 VVQISLTNSI 384
            V +  ++S+
Sbjct: 486 QVAMGYSHSL 495



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 205 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 264 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 381 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 488

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 489 MGYSHSLVIARD 500



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 220

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 385

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 372 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 420

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 481 GIFTEQVAMGYSHSLVIARD 500



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 224

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ + G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 31  QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 90

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 91  HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 148

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LAL   PS   
Sbjct: 149 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALV--PSSGL 205

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +Y+ GCG  G+LG G   + K P
Sbjct: 206 IYAFGCGAKGQLGTGHTCNVKCP 228



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P   
Sbjct: 15  VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR- 73

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   +
Sbjct: 74  VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 127

Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
           LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   +  
Sbjct: 128 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVT 187

Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
            +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 188 QIACGRQHTLALVPSSGLIYAFGCGAKGQLG 218



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 28/241 (11%)

Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
           G+D +LG  T  + V    L+  L    ++Q++ G  + LALA   +    ++ G    G
Sbjct: 1   GSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA---ADGQFFTWGKNSHG 57

Query: 236 KLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
           +LG G    S+T  +  R +E   L       VAAG  H+  +   G V  WG    G L
Sbjct: 58  QLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQL 112

Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
           G  +E+    P  V+ L   K ++++ G+  T V+++ G V++FG G    LGH+++ D 
Sbjct: 113 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 172

Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQL 410
              R            L+ +   V QI+         HT AL   SG +YAFG G KGQL
Sbjct: 173 VNPRRV----------LELMGSEVTQIACGRQ-----HTLALVPSSGLIYAFGCGAKGQL 217

Query: 411 G 411
           G
Sbjct: 218 G 218



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 24/199 (12%)

Query: 232 GLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G  G+LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G
Sbjct: 1   GSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 57

Query: 290 CLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            LG G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +  
Sbjct: 58  QLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 117

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D +   H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  G
Sbjct: 118 KDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCG 162

Query: 409 QLGIELVNNQTERGNPERV 427
           QLG + VN++    NP RV
Sbjct: 163 QLGHDSVNDEV---NPRRV 178



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 114/238 (47%), Gaps = 12/238 (5%)

Query: 71  SSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
           S GQLG  TTE+    PR I+ L    I+Q + G    + ++  GQ + +GK+S G+   
Sbjct: 2   SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 61

Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
           G +     TSPQ V SL+ I + Q A G   +  LS  G V+ +   N  +LG   E  D
Sbjct: 62  GKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KD 119

Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
            E    +  L    VV I+ G  +   L    SG  V++ G G  G+LGH S  DE +PR
Sbjct: 120 RESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSVNDEVNPR 176

Query: 250 LIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
            +   +L+  +   +A G  H  A+V   G +  +G G  G LG G   N +C S  K
Sbjct: 177 RV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 232



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 83  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 142

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S G+   G        +P+ V  L    V Q A G   T A++
Sbjct: 143 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 200

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 201 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 233


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 166/359 (46%), Gaps = 31/359 (8%)

Query: 56  IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
           + V  K  VY +GSNSS QL  G  E+     P++S    ++ Q  AG   T  I   G 
Sbjct: 342 VGVYEKSDVYVWGSNSSHQLAEGNQEKIL--MPVKSKMFTQVQQVEAGQYCTFAIHWDGS 399

Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
           V A GK S+G    G    + +    L++  +K +   + + G+  T  L+  G VY++ 
Sbjct: 400 VSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGH--TLALAETGVVYSWG 457

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            G+  +LGH       +P  + G      +  I AGY +  A+        +Y+ G G  
Sbjct: 458 DGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT---DDGKLYTWGEGDH 514

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGR-VCTWGWGRYGCLG 292
           G+LGHG       P      Q+  L  V  VA G+ H  VV +DG+ V ++G G +G LG
Sbjct: 515 GRLGHGDSNARYVPT-----QVAGLAEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLG 569

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
            G       P+VV+AL  +    V  G + +  ++  G+VY++G G        AI  G+
Sbjct: 570 TGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSG--------AIL-GK 620

Query: 353 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           G+  A V  P  V  L Q   R+V IS  ++     H  ALT+  +++A+G    GQ G
Sbjct: 621 GSADAIVNLPMYVEDLAQY--RIVDISAGDN-----HCLALTDEHEVFAWGTNSMGQCG 672



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 27/348 (7%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-G 105
           Q  AG   + A+   G V + G  S G+LG G +  +  P+ I     ++ + ++ G+ G
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDG 442

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKNIFVVQAAIGNFFT 161
            T+ +++ G VY++G   +G+  +G   T    + +T P L +++K I       G   +
Sbjct: 443 HTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHA-----GYRHS 497

Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
           A ++ +G++YT+  G+  RLGH        P  + G  E   V  +A G  + L ++   
Sbjct: 498 AAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAE---VGSVACGSSHTLVVS--K 552

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
            G  V+S G G  GKLG G       P+++E  Q L +Q V   AG W +  +   G V 
Sbjct: 553 DGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKV--CAGTWFSMALTTAGEVY 610

Query: 282 TWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
           TWG G    LG G+ +   ++P  V+ L   + + ++ GD     ++++ +V+++G   +
Sbjct: 611 TWGSG--AILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWG---T 665

Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            S+G      GQG+  + +  P  V  L+ V+ R +    ++S+ W +
Sbjct: 666 NSMGQC----GQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 24/348 (6%)

Query: 47   QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
            + I G   +  + S G V + G  S G+LG G +++      I SLQG  I   A     
Sbjct: 3361 KIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGS 3420

Query: 105  -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             G ++ ++++G+V+++G   FG+  +G    +    P+ +E+L+   VVQ A G   +AV
Sbjct: 3421 DGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ--RRPRQIEALQTEQVVQVACGFKHSAV 3478

Query: 164  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPS 222
            ++ +G+++TF  G+  +LG  +  N   P  ++  LE   + Q+A G   L   AC    
Sbjct: 3479 VTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMA-LEGYRIGQVACG---LNHTACVSTD 3534

Query: 223  GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
            GM V++ G G  GKLG G  T +  P+ +E   + NL    V  G      + +DG+V  
Sbjct: 3535 GMTVWTFGEGDYGKLGLGYATMKLLPQKVE--TVCNLGIKKVGCGTHLTLFLTKDGKVFV 3592

Query: 283  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
             G  R        E     P+++ +L+D     +A G      ++  G V  +G      
Sbjct: 3593 CGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQ 3652

Query: 343  LG--HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            LG  H ++      RH     P+++T L     R +    T+S  W+A
Sbjct: 3653 LGLPHVSLV-----RH-----PEIITELSDKGIRQISTGRTHSAAWSA 3690



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 155/359 (43%), Gaps = 36/359 (10%)

Query: 61   KGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
            K   Y +GS+  GQL   G+  +     P  + S    R I    G   T +I   G V 
Sbjct: 3326 KCKAYMWGSDRHGQLAELGYSAS----VPVQVESFSIARKI--ICGQNCTFVIQSDGTVL 3379

Query: 118  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFS 174
            A G+ S+G    G   +  + S  ++ SL+   +   A     +  +  L+  G V+++ 
Sbjct: 3380 ACGEGSYGRLGQG--NSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWG 3437

Query: 175  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
             G+  +LGH        P  +   L+   VVQ+A G+ +    A   S   +++ G G  
Sbjct: 3438 DGDFGKLGHGNPDRQRRPRQI-EALQTEQVVQVACGFKHS---AVVTSDGKLFTFGNGDF 3493

Query: 235  GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGH 293
            GKLG GS  ++K P  +   +   +  V  A G  H A V  DG  V T+G G YG LG 
Sbjct: 3494 GKLGLGSVANKKLPERVMALEGYRIGQV--ACGLNHTACVSTDGMTVWTFGEGDYGKLGL 3551

Query: 294  GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
            G    + +P+ V+ + ++    V  G + T  +++DG V  F CG      H+       
Sbjct: 3552 GYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKV--FVCGIDRMPWHSLF----- 3604

Query: 354  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
             R   V  PQ++TSL          S+ +      H   LT  GK+  +G   +GQLG+
Sbjct: 3605 -RERAVFKPQIMTSLSDY-------SIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL 3655



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 34/253 (13%)

Query: 168  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
            G+   + WG+D R G   E         LG   ++PV Q+ +       +  Q     + 
Sbjct: 3325 GKCKAYMWGSD-RHGQLAE---------LGYSASVPV-QVESFSIARKIICGQNCTFVIQ 3373

Query: 228  SVG----CGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRV 280
            S G    CG G  G+LG G+  D     +I   Q   +  +  + G+  H+  + + G V
Sbjct: 3374 SDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEV 3433

Query: 281  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             +WG G +G LGHGN + +  P+ ++AL   + + VA G   + VV+ DG +++FG G+ 
Sbjct: 3434 FSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDF 3493

Query: 341  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KL 399
              LG  ++A+ +         P+ V +L+    R+ Q++   +     HT  ++  G  +
Sbjct: 3494 GKLGLGSVANKK--------LPERVMALE--GYRIGQVACGLN-----HTACVSTDGMTV 3538

Query: 400  YAFGAGDKGQLGI 412
            + FG GD G+LG+
Sbjct: 3539 WTFGEGDYGKLGL 3551



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 16/246 (6%)

Query: 38   EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
            EA    +  Q   G  HS  VTS G +++FG+   G+LG G+   +  P  + +L+G RI
Sbjct: 3459 EALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRI 3518

Query: 98   IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
             Q A G   T  +S D   V+ FG+  +G+   G    KL+  PQ VE++ N+ + +   
Sbjct: 3519 GQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLL--PQKVETVCNLGIKKVGC 3576

Query: 157  GNFFTAVLSREGRVYTFSWGNDARLGHHT---EPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            G   T  L+++G+V  F  G D R+  H+   E    +P  ++ +L +  +  +A G  +
Sbjct: 3577 GTHLTLFLTKDGKV--FVCGID-RMPWHSLFRERAVFKPQ-IMTSLSDYSIEDLAVGTEH 3632

Query: 214  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---AGAWH 270
            +L L    +   V   G    G+LG    +  +HP +I +     ++ +      + AW 
Sbjct: 3633 VLFLT---TCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSAAWS 3689

Query: 271  AAVVGQ 276
            A  + Q
Sbjct: 3690 APPLPQ 3695



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 16/272 (5%)

Query: 40  CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRII 98
           C  ++ S +    GH++A+   GVVYS+G    G+LGHG      +P  I     G  I 
Sbjct: 429 CVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIK 488

Query: 99  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
              AG   +  ++D G++Y +G+   G   +G    + V  P  V  L  +  V  A G+
Sbjct: 489 YIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYV--PTQVAGLAEVGSV--ACGS 544

Query: 159 FFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
             T V+S++G+ V++F  G   +LG   E   V    ++  L+ + + ++ AG  + +AL
Sbjct: 545 SHTLVVSKDGKTVWSFGSGEHGKLG-TGELGKVYRPQVVEALQGLTIQKVCAGTWFSMAL 603

Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
               +   VY+ G   G  LG GS     + P  +E   L   + V ++AG  H   +  
Sbjct: 604 T---TAGEVYTWGS--GAILGKGSADAIVNLPMYVE--DLAQYRIVDISAGDNHCLALTD 656

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
           +  V  WG    G  G G+  C  + + ++ +
Sbjct: 657 EHEVFAWGTNSMGQCGQGH-TCSPITRPLKVI 687



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 21/158 (13%)

Query: 273  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
            V+  DG V   G G YG LG GN +      V+ +L       +AT    D  +  ++E 
Sbjct: 3371 VIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAES 3430

Query: 330  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
            G+V+S+G G+   LGH     G  +R      P+ + +L+   E+VVQ++         H
Sbjct: 3431 GEVFSWGDGDFGKLGH-----GNPDRQRR---PRQIEALQ--TEQVVQVACGFK-----H 3475

Query: 390  TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
            +  +T  GKL+ FG GD G+LG+  V N   +  PERV
Sbjct: 3476 SAVVTSDGKLFTFGNGDFGKLGLGSVAN---KKLPERV 3510


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 31/340 (9%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H++A+ S G ++++G N  GQLG  +T   + P  + +L     +  +AG   ++ +
Sbjct: 687  GENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLAL 744

Query: 111  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
               G V+AFG + +G+   G   ++   +P  V+ L  +  + A  G  F+  L  +G V
Sbjct: 745  KSDGTVWAFGYNGYGQLGDGTTSSQR--TPVQVKDLTGVVAIAA--GKDFSLALKSDGTV 800

Query: 171  YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +  SWG +    LG+ T      P  +    +   V  IAAG  + +AL    S   V++
Sbjct: 801  W--SWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFA 852

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
             G    G+LG+ S   +  P    Q  +  ++ +  AAG +H   +  DG V +WG+  Y
Sbjct: 853  WGYNGNGELGNSSTISQSTPV---QSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGY 907

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG+GN    SVP  +  L  + +I  A G+  +     DG +YS+G   +  LG+   
Sbjct: 908  GQLGNGNNTSRSVPAAIPGLASIASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTT 965

Query: 349  AD--------GQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             D        G     A+   P  V+ L+  ++ V  ++L
Sbjct: 966  VDTNVPHKVIGPNINPADTTAPAAVSDLRVSSQNVRSLTL 1005



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           H++ + S G V+ +G N  GQLG GT+     P  + +L G+++I  A G   T+ +   
Sbjct: 640 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 697

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G ++ +G + +G  + G   T    SP  V +L N   V A  G   +  L  +G V+ F
Sbjct: 698 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 753

Query: 174 SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
            +    +LG  T  +   P     L G      VV IAAG  + LAL    +   V+S G
Sbjct: 754 GYNGYGQLGDGTTSSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGT---VWSWG 804

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
               G+LG+G+ T    P  ++   L +++   +AAG +H   + +DG V  WG+   G 
Sbjct: 805 QNTYGELGNGTTTRSSVP--VQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYNGNGE 860

Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
           LG+ +   +S P V   +  +K I  A G Y T  +  DG V+S+G      LG+     
Sbjct: 861 LGNSSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLGN----- 912

Query: 351 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
             GN  +  + P  +  L  +       +          + A    G LY++G    GQL
Sbjct: 913 --GNNTSRSV-PAAIPGLASIASIAAGEN---------QSIAYGNDGILYSWGRNANGQL 960

Query: 411 G 411
           G
Sbjct: 961 G 961



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 18/257 (7%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  HS+A+ S G V++FG N  GQLG GTT  +  P  ++ L G+  I  AAG   ++ 
Sbjct: 736 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAI--AAGKDFSLA 793

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +   G V+++G++++GE   G   T   + P  V  L ++  + A  G++    L ++G 
Sbjct: 794 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 849

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V+ + +  +  LG+ +  +  +  P+   +  I    IAAG  + LAL    +   V+S 
Sbjct: 850 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALKSDGT---VWSW 902

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG+G+ T    P  I     +      +AAG   +   G DG + +WG    G
Sbjct: 903 GYNGYGQLGNGNNTSRSVPAAIPGLASI----ASIAAGENQSIAYGNDGILYSWGRNANG 958

Query: 290 CLGHGNEECESVP-KVV 305
            LG+G     +VP KV+
Sbjct: 959 QLGNGTTVDTNVPHKVI 975



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 31/185 (16%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G+ +    P        L   P+ V+    H   +  DG V  WG+  +G LG G     
Sbjct: 610 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNST 669

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           SVP  V  L  +K I  A G+  T  +  DG ++++G      LG     D    R++ V
Sbjct: 670 SVPGKVINLTGMKMI--AGGENHTVALRSDGTLHTWGYNGYGQLGD----DSTTTRYSPV 723

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNA------HTFALTESGKLYAFGAGDKGQLGIE 413
                     QV+      +LTN   W A      H+ AL   G ++AFG    GQLG  
Sbjct: 724 ----------QVS------TLTN---WTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDG 764

Query: 414 LVNNQ 418
             ++Q
Sbjct: 765 TTSSQ 769


>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1271

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 166/412 (40%), Gaps = 38/412 (9%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAA 101
           SQ  +G  HS+A+ S G +Y++G NSSGQ+G  +T     P    +P  +         A
Sbjct: 207 SQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNKPANASDQFTFTTIA 266

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNF 159
           AG   ++ I   G +YA+G ++ G+   G    KL  V  P+           Q +    
Sbjct: 267 AGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFTWTQVSARWD 326

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP--------LLGTLENIPVVQIAAGY 211
            T  L     +Y + W    +LG+ + P   + +P        L+ T   +   Q++AG 
Sbjct: 327 HTLALGSNHNLYAWGWNGYGQLGNTSVPTGSD-NPAAYSSKPVLVSTPAGVTFTQLSAGR 385

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            + LAL    S   +Y+ G    G+LG G+      P  + Q   +       +AG    
Sbjct: 386 YHSLALG---SDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPAGVTFS--QFSAGDTSC 440

Query: 272 AVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA----IHVATGDYTTFVV 326
             +  +G +  WGW  YG LG G N E    P ++   +   A      V   D     +
Sbjct: 441 FAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLAI 500

Query: 327 SEDGDVYSFGCGESASLGHNAI-ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 385
             DG++YS+G  E   LG   I  DG     + +  P +V        +    +  N+ +
Sbjct: 501 GSDGNLYSWGLNEYGQLGIKDINTDG-----SYISRPHIVDQSTSSTAQKFTWTQINAGW 555

Query: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELV-----NNQTERGNPERVDIDLS 432
               + AL   G LY +G  + GQLG   V     N+Q  R  P      LS
Sbjct: 556 --RESSALGSDGNLYTWGWNNGGQLGDPTVPIGTDNSQAMRLTPSLAAFPLS 605



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 32/339 (9%)

Query: 93  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---- 148
           +GI+  Q  +GA  ++ +   G +YA+G +S G+   G   T L  +P       N    
Sbjct: 202 RGIKFSQITSGATHSLALGSDGSLYAWGDNSSGQV--GDNSTTLRQTPVKTNKPANASDQ 259

Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPL---LGTLENIP 203
                 A G+  +  +  +G +Y  +WGN+ R  LG  T  N + P  +    G      
Sbjct: 260 FTFTTIAAGDHSSLAIGSDGNLY--AWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFT 317

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPV 262
             Q++A + + LAL    S   +Y+ G    G+LG+ S  T   +P       +L   P 
Sbjct: 318 WTQVSARWDHTLALG---SNHNLYAWGWNGYGQLGNTSVPTGSDNPAAYSSKPVLVSTPA 374

Query: 263 VV-----AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
            V     +AG +H+  +G D ++  WG    G LG G +     P  V+    V     +
Sbjct: 375 GVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPAGVTFSQFS 434

Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
            GD + F +S +GD+Y++G      LG  + A+ +  R   +++P    S      RV  
Sbjct: 435 AGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDR--RTPTLISPPDGASAGFTWARV-- 490

Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
                 +  + H  A+   G LY++G  + GQLGI+ +N
Sbjct: 491 ------MVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDIN 523



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 162/404 (40%), Gaps = 52/404 (12%)

Query: 46   SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGA 104
            SQ  AG  HS+A+ S G VYS+G+N  GQLG GT  +   P  I    G+ R  Q +AG 
Sbjct: 764  SQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAGT 823

Query: 105  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTK----LVTSPQLVESLKNIFVVQ---AAIG 157
            G ++ +   G V+A+G +S G+       T       +SP  V++   +         I 
Sbjct: 824  GFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGIS 883

Query: 158  NFFTAVLSREGRVYTFSWGND------------ARLGHHTEPNDVEPHPLLGTLENIPVV 205
               T VL+ +G+   + WG++            A  G  T P  V+     G        
Sbjct: 884  AGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRP--VQVATPQGETTGFHYA 941

Query: 206  QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLN----L 259
            Q++AG  + LA   Q  G A +  G    G LG+ S    +      ++     N     
Sbjct: 942  QVSAGGSHSLATDTQ--GRA-WGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGF 998

Query: 260  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
             P  + AG+ H+  +   GR+ +WG    G LG G+    + P +V    +V      TG
Sbjct: 999  NPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFTQLTG 1058

Query: 320  DY---TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
                  +  + ++G+++ +G   S  LG      G  NR   +  P  +    +V     
Sbjct: 1059 SRVSGNSLALDQNGNIWGWGQNSSGMLGTGGT--GSLNRPTKMSNPSGIDHFVKVCAGT- 1115

Query: 377  QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 420
                        HT A+   G    +G   +G+LG    NN TE
Sbjct: 1116 -----------GHTLAVASDGSTLGWGDNSQGRLG----NNATE 1144



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 144/366 (39%), Gaps = 48/366 (13%)

Query: 93   QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
            +GIR  Q +AG   ++ +   G VY++G + +G+   G   T  +T  Q+ +        
Sbjct: 759  RGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGT-ATDRLTPVQIPKPTGVNRFT 817

Query: 153  QAAIGNFFTAVLSREGRVYTFSWGNDARLG-----------HHTEPNDVEPHPLLGTLEN 201
            Q + G  F+  L  +G V+ +   +  +LG           + + P  V+  P   T  N
Sbjct: 818  QVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQ-APSGMTATN 876

Query: 202  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
              +  I+AG  ++LA+  Q  G A +  G    GKLG  + T           Q+   Q 
Sbjct: 877  FTLTGISAGITHVLAVDGQ--GRA-WGWGSNEFGKLGVPASTVATTGITTRPVQVATPQG 933

Query: 262  VV-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQAL---- 308
                     V+AG  H+      GR   WG  + G LG+ ++   +      VQA     
Sbjct: 934  ETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTN 993

Query: 309  --NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLV 365
                     +  G   +  + + G ++S+G   +  LG   + D       + V  P  V
Sbjct: 994  PSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELG---LGDTTTRTAPSMVAMPANV 1050

Query: 366  TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL---GIELVNNQTERG 422
            ++  Q+    V          + ++ AL ++G ++ +G    G L   G   +N  T+  
Sbjct: 1051 STFTQLTGSRV----------SGNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMS 1100

Query: 423  NPERVD 428
            NP  +D
Sbjct: 1101 NPSGID 1106



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
           V  A   ++   V+ GD  +  +  DG+VYS+G  +   LG     D         LTP 
Sbjct: 754 VPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATD--------RLTPV 805

Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 415
            +     VN R  Q+S          + AL   G ++A+G    GQLG   +
Sbjct: 806 QIPKPTGVN-RFTQVSAGTGF-----SLALDGQGHVWAWGLNSSGQLGSNAI 851


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 12/301 (3%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H   ++  G ++++G    G+LGHG  E    P+ + +L  I +     G   T+ 
Sbjct: 136 AGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIA 195

Query: 110 IS-DAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
           +S  AG  +Y +G + FG+   G  G      P+ V       +V    G    AV+   
Sbjct: 196 LSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSS 255

Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           G ++T+  G+  RLGH    N  +P  L+ +L    VV +A G  + LAL        ++
Sbjct: 256 GALFTWGRGDHGRLGHGDTENRYQP-TLVSSLYGHVVVAVALGGGHSLALT---KAGELF 311

Query: 228 SVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
           S G G  G+LGHGS ++ +  P+ ++ F  +++  ++ ++AG +H+     DG V  WG 
Sbjct: 312 SWGRGENGQLGHGSYQSQQLAPKQLQFF--VDMPKIIGISAGGYHSVAQLDDGSVYAWGM 369

Query: 286 GRYGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
             YG LG G+ +    ++P+ +     ++   ++ G   T  ++ D  +YS+GCG    L
Sbjct: 370 SDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRL 429

Query: 344 G 344
           G
Sbjct: 430 G 430



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 153/334 (45%), Gaps = 37/334 (11%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           RII   AGA    +IS +G+++ +G+  +G   +G + +  +++P+ V +L NI +    
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEES--ISTPKQVVALANIPMKYVF 187

Query: 156 IGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
            G   T  LS       ++WGN+   +LG     +D    P     E++ V     G   
Sbjct: 188 CGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLP-----ESVAV----PGAKR 238

Query: 214 LLAL-------ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
           L+AL       A   S  A+++ G G  G+LGHG   +   P L+    L     V VA 
Sbjct: 239 LVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSS--LYGHVVVAVAL 296

Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDV-KAIHVATGDYTTF 324
           G  H+  + + G + +WG G  G LGHG+ + + + PK +Q   D+ K I ++ G Y + 
Sbjct: 297 GGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSV 356

Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              +DG VY++G  +   LG     DG  N    +L P+ +        R   IS     
Sbjct: 357 AQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGI--------RFKTISCGFQ- 407

Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
               HT ALT    +Y++G G  G+LG     NQ
Sbjct: 408 ----HTVALTSDNTIYSWGCGLGGRLGTFNEKNQ 437



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 7/238 (2%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG   +  + S G ++++G    G+LGHG TE  ++P  + SL G  ++  A G G ++ 
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLA 303

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           ++ AG+++++G+   G+  +G   ++ +   QL   +    ++  + G + +     +G 
Sbjct: 304 LTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGS 363

Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
           VY +   +   LG   ++   +     +     I    I+ G+ + +AL    S   +YS
Sbjct: 364 VYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALT---SDNTIYS 420

Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
            GCGLGG+LG  +  ++  P       + N QPVV +AG     V+G+   V     G
Sbjct: 421 WGCGLGGRLGTFNEKNQCAPIAC---NIPNYQPVVFSAGEISTIVIGKKNTVVATSSG 475



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 134/284 (47%), Gaps = 13/284 (4%)

Query: 64  VYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
           +Y++G+N  GQLG G   +++   P  +      R++   AGA R  +I  +G ++ +G+
Sbjct: 204 LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGR 263

Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
              G   +G   T+    P LV SL    VV  A+G   +  L++ G ++++  G + +L
Sbjct: 264 GDHGRLGHG--DTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQL 321

Query: 182 GHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
           GH + +   + P  L   ++   ++ I+AG  + +A   Q    +VY+ G    G LG G
Sbjct: 322 GHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVA---QLDDGSVYAWGMSDYGILGTG 378

Query: 241 SRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
              D     P+ I   + +  +   ++ G  H   +  D  + +WG G  G LG  NE+ 
Sbjct: 379 DSDDGAINIPQRILMPRGIRFK--TISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436

Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           +  P +   + + + +  + G+ +T V+ +   V +   G +++
Sbjct: 437 QCAP-IACNIPNYQPVVFSAGEISTIVIGKKNTVVATSSGLTST 479


>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
          Length = 507

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 146 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 205

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 206 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 263

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 264 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 323

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 324 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 380

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 381 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 433

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 434 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 482



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 192 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 250

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 251 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 309

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 310 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 367

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 368 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 418

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 419 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 475

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 476 MGYSHSLVIARD 487



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 124 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 181

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 182 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 237

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 238 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 297

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 298 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 348



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 149 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 207

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 208 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 260

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 261 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 320

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 321 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 372

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 373 QIYAGYTC-----SFAVSEVGGLFFWGA 395



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 369 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 422

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 423 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 482

Query: 163 VLSRE 167
           V++R+
Sbjct: 483 VIARD 487



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 122 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 166

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 167 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 211

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 212 GENKMGQLGL---GNQTD 226


>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
           africana]
          Length = 523

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)

Query: 7   IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
           I +P    ER  L+  KC G        +W L+ R  +  +    R   Q + GP     
Sbjct: 86  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145

Query: 53  ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
                           HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    I
Sbjct: 146 XSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 205

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
           + AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A G
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 263

Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
             F+ ++  +G +Y+F      +LGH+++            D E  P             
Sbjct: 264 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 323

Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
            +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ F
Sbjct: 324 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380

Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
                    + AG   +  V + G +  WG        + + E    PK VQ L   K  
Sbjct: 381 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIR 434

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +   
Sbjct: 435 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFTE 488

Query: 375 VVQISLTNSI 384
            V +  ++S+
Sbjct: 489 QVAMGYSHSL 498



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 208 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 266

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 267 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 325

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 326 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 383

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 384 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 434

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 435 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 491

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 492 MGYSHSLVIARD 503



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G    + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 140 PH-RYGCXSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 197

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 313

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 314 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 364



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 223

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 388

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 389 QIYAGYTC-----SFAVSEVGGLFFWGA 411



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 375 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 423

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G +I   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 424 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 483

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 484 GIFTEQVAMGYSHSLVIARD 503



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGC         S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 138 WGPHRYGCX--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 182

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 183 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 227

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 228 GENKMGQLGL---GNQTD 242


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 21/316 (6%)

Query: 50  AGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
           AG  H   VT +  +Y++     G+   GQL HG       P+ +    GI I QA  G 
Sbjct: 490 AGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGE 549

Query: 105 GRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
             T++++++G VY+ G D +G     G+ G+ ++T P  +++L  + VV  A G+     
Sbjct: 550 DFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLT-PIKIDALSKLKVVSIACGDCHVVA 608

Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPS 222
           L+  G VYT+  G   RLG   + ND     L+   E    +V+I  G      L     
Sbjct: 609 LTNIGSVYTWGNGEHGRLGLGNQ-NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGH 667

Query: 223 GMAVYSVGC---GLGGKLGHGSRTDEKHPRLIEQFQLL--------NLQPVVVAAGAWHA 271
            +A  +  C    L   +     TD+   +    +  L        + + V +A+G  H+
Sbjct: 668 LLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHS 727

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT-GDYTTFVVSEDG 330
           AVV + GR+ T+G   +G LG G+ +  + P +V  L + K + +   GD  T V + D 
Sbjct: 728 AVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTVVATADN 787

Query: 331 DVYSFGCGESASLGHN 346
            ++S+GCGE+  LG N
Sbjct: 788 QIFSWGCGENGRLGLN 803



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 46/354 (12%)

Query: 98  IQAAAGAGRTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
           I+ +AG     +++   ++Y +     G +  G+  +G +   +  +P+ V+    I + 
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRA--MYRTPKRVDFFTGIPIK 543

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHH-TEPNDVEPHPLLGTLENIPVVQIAA 209
           QA  G  FT +L+  G VY  S G+D    LG      ++V     +  L  + VV IA 
Sbjct: 544 QAVCGEDFTIILTESGDVY--SCGSDYYGCLGCEGIYGSNVLTPIKIDALSKLKVVSIAC 601

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G C+++AL    S   VY+ G G  G+LG G++ D   P+L+   +  N   V +  G  
Sbjct: 602 GDCHVVALTNIGS---VYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNY-IVKITCGRD 657

Query: 270 HAAVVGQDGRVCTWGWGRYGCLG-------HGNEECES---------VPKVVQALNDVKA 313
           +  ++  +G +  +G      L         GN +  S         +P  V+ L   + 
Sbjct: 658 NTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRI 717

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           + +A+G   + VV E G + +FG   S + G   + D Q         P LV+ L    E
Sbjct: 718 VSMASGKSHSAVVDEFGRLLTFG---SNTFGELGLGDYQSRNF-----PSLVSGLLNGKE 769

Query: 374 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
               +++ N    +  T   T   +++++G G+ G+LG+ L N  T+  +P+ +
Sbjct: 770 ----VTICNC--GDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPI 817



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 21/173 (12%)

Query: 262 VVVAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
           + V+AG  H AVV  +  + TW     G    G L HGN      PK V     +     
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQA 545

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
             G+  T +++E GDVYS G      LG       +G   +NVLTP  + +L ++  +VV
Sbjct: 546 VCGEDFTIILTESGDVYSCGSDYYGCLG------CEGIYGSNVLTPIKIDALSKL--KVV 597

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
            I+       + H  ALT  G +Y +G G+ G+LG+    NQ +   P+ V +
Sbjct: 598 SIACG-----DCHVVALTNIGSVYTWGNGEHGRLGL---GNQNDFNLPQLVTL 642



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 24/179 (13%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLG-------HGTTEEEWR---------PRPIRSLQG 94
           G  ++  +TS G + +FG+N   +L         G T++            P P+R L+ 
Sbjct: 655 GRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRS 714

Query: 95  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQ 153
            RI+  A+G   + ++ + G++  FG ++FGE   G   ++    P LV  L N   V  
Sbjct: 715 YRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSR--NFPSLVSGLLNGKEVTI 772

Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PHPLLGTLENIPVVQIAA 209
              G+ FT V + + +++++  G + RLG +      +   P P+ G+L    VV +AA
Sbjct: 773 CNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIFGSLH--KVVSMAA 829


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 159/384 (41%), Gaps = 37/384 (9%)

Query: 47  QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGA 104
            AIA  G H+ A TS G V  +G+N SGQLG GTT     P  +  L  G+  I  AAG 
Sbjct: 274 TAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASGVTAI--AAGD 331

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++ +G V+ +G + FG+   G   T   ++P  V  L +  V   A G+F T  L
Sbjct: 332 SHTCALTSSGGVWCWGYNFFGQLGDGT--TTDRSTPVAVSGLGS-GVTAIAAGDFHTCAL 388

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
              G V  +    D +LG  T      P  + G +    V  IAAG  +  A   + S  
Sbjct: 389 MSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG--VTAIAAGDDHTCA---RTSSG 443

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V   G    G+LG G+ TD   P  +     L      +AAG  H   +   G V  WG
Sbjct: 444 GVMCWGDNWSGQLGDGTTTDRSTPVAVSG---LGSGVTAIAAGGSHTCALMSSGGVWCWG 500

Query: 285 WGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
               G LG G       P  V  L ++V AI  A+G   T  ++  G V  +G   S  L
Sbjct: 501 RNSSGQLGDGTTTDRGTPVAVSGLPSEVTAI--ASGGVHTCALTSSGGVMCWGANWSGQL 558

Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 403
           G     DG     +   TP  V+ L      +    L        HT ALT SG ++ +G
Sbjct: 559 G-----DGTTTARS---TPVAVSGLPSGVMAIAAGDL--------HTCALTSSGGVWCWG 602

Query: 404 AGDKGQLGIELVNNQTERGNPERV 427
           A   GQLG       T R  P  V
Sbjct: 603 ANSSGQLGD---GTTTARSTPVAV 623



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 153/379 (40%), Gaps = 34/379 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+ A TS G V  +G N SGQLG GTT +   P  +  L G  +   AAG   T  
Sbjct: 176 AGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCA 234

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +  +G V+ +G +  G+   G   T   ++P  V  L +  V   A G F T   +  G 
Sbjct: 235 LMSSGGVWCWGDNWSGQLGDGT--TTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTSSGG 291

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  +      +LG  T      P  + G      V  IAAG  +  AL    S   V+  
Sbjct: 292 VMCWGANWSGQLGDGTTTARSTPVAVSGLASG--VTAIAAGDSHTCAL---TSSGGVWCW 346

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ TD   P  +     L      +AAG +H   +   G V  WG  + G
Sbjct: 347 GYNFFGQLGDGTTTDRSTPVAVSG---LGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDG 403

Query: 290 CLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            LG G     S P  V  L + V AI  A GD  T   +  G V  +G   S  LG    
Sbjct: 404 QLGDGTTTTRSTPVAVSGLVSGVTAI--AAGDDHTCARTSSGGVMCWGDNWSGQLGDGTT 461

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D          TP  V+ L      V  I+   S     HT AL  SG ++ +G    G
Sbjct: 462 TDRS--------TPVAVSGL---GSGVTAIAAGGS-----HTCALMSSGGVWCWGRNSSG 505

Query: 409 QLGIELVNNQTERGNPERV 427
           QLG       T+RG P  V
Sbjct: 506 QLGD---GTTTDRGTPVAV 521



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 154/364 (42%), Gaps = 33/364 (9%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+ A+TS G V+ +G N  GQLG GTT +   P  +  L G  +   AAG   T  
Sbjct: 329 AGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGDFHTCA 387

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +  +G V  +G++  G+   G   T+  ++P  V  L +  V   A G+  T   +  G 
Sbjct: 388 LMSSGGVRCWGRNKDGQLGDGTTTTR--STPVAVSGLVS-GVTAIAAGDDHTCARTSSGG 444

Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           V    WG++   +LG  T  +   P  + G      V  IAAG  +  AL    S   V+
Sbjct: 445 V--MCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIAAGGSHTCALM---SSGGVW 497

Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
             G    G+LG G+ TD   P  +     L  +   +A+G  H   +   G V  WG   
Sbjct: 498 CWGRNSSGQLGDGTTTDRGTPVAVSG---LPSEVTAIASGGVHTCALTSSGGVMCWGANW 554

Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
            G LG G     S P  V  L     + +A GD  T  ++  G V+ +G   S  LG   
Sbjct: 555 SGQLGDGTTTARSTPVAVSGLPS-GVMAIAAGDLHTCALTSSGGVWCWGANSSGQLG--- 610

Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
             DG     +   TP  V+ L      +   S         HT ALT SG ++ +GA   
Sbjct: 611 --DGTTTARS---TPVAVSGLPSGVTAIAAGSF--------HTCALTSSGGVWCWGANWS 657

Query: 408 GQLG 411
           GQLG
Sbjct: 658 GQLG 661



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 148/363 (40%), Gaps = 31/363 (8%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG  H+ A TS G V  +G N SGQLG GTT +   P  +  L G  +   AAG   T  
Sbjct: 431 AGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCA 489

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           +  +G V+ +G++S G+   G   T    +P  V  L +  V   A G   T  L+  G 
Sbjct: 490 LMSSGGVWCWGRNSSGQLGDGT--TTDRGTPVAVSGLPS-EVTAIASGGVHTCALTSSGG 546

Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           V  +      +LG  T      P  + G      V+ IAAG  +  AL    S   V+  
Sbjct: 547 VMCWGANWSGQLGDGTTTARSTPVAVSGLPSG--VMAIAAGDLHTCALT---SSGGVWCW 601

Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
           G    G+LG G+ T    P  +     L      +AAG++H   +   G V  WG    G
Sbjct: 602 GANSSGQLGDGTTTARSTPVAVSG---LPSGVTAIAAGSFHTCALTSSGGVWCWGANWSG 658

Query: 290 CLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            LG G+    S P  V  L + V AI  A G + T   +  G V+ +       LG  + 
Sbjct: 659 QLGDGSYTDSSTPVAVSGLPSGVTAI--AAGRFHTCARTGSGGVWCWASNRYGQLGDGSY 716

Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
            D        V    LV+ +  +   VV            HT A T SG +  +GA   G
Sbjct: 717 TD----SSTPVAVSGLVSGVTAIAAGVV------------HTCARTSSGGVMCWGANSSG 760

Query: 409 QLG 411
           QLG
Sbjct: 761 QLG 763



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 153/382 (40%), Gaps = 40/382 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
           AG  H+ A+TS G V  +G N  GQLG GTT +   P  +  L  G+  I  AAG   T 
Sbjct: 74  AGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVTAI--AAGYAHTC 131

Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
            +  +G V  +G +  G+   G   T   ++P  V  L +  V   A G+  T   +  G
Sbjct: 132 ALMSSGGVMCWGDNWSGQLGDGT--TTDRSTPVAVSGLAS-GVTAIAAGDDHTCARTSSG 188

Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
            V    WG++   +LG  T  +   P  + G      V  IAAG  +  AL    S   V
Sbjct: 189 GV--MCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIAAGGSHTCALM---SSGGV 241

Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           +  G    G+LG G+ TD   P  +     L      +AAG +H       G V  WG  
Sbjct: 242 WCWGDNWSGQLGDGTTTDRSTPVAVSG---LASGVTAIAAGGFHTCARTSSGGVMCWGAN 298

Query: 287 RYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
             G LG G     S P  V  L + V AI  A GD  T  ++  G V+ +G      LG 
Sbjct: 299 WSGQLGDGTTTARSTPVAVSGLASGVTAI--AAGDSHTCALTSSGGVWCWGYNFFGQLGD 356

Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
               D          TP  V+ L      V  I+       + HT AL  SG +  +G  
Sbjct: 357 GTTTDRS--------TPVAVSGL---GSGVTAIAAG-----DFHTCALMSSGGVRCWGRN 400

Query: 406 DKGQLGIELVNNQTERGNPERV 427
             GQLG       T R  P  V
Sbjct: 401 KDGQLGD---GTTTTRSTPVAV 419



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 137/339 (40%), Gaps = 39/339 (11%)

Query: 92  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
           LQG+  I  AAG   T  ++ +G V  +G++ FG+   G   T   ++P  V  L +  V
Sbjct: 66  LQGVTAI--AAGGAHTCALTSSGGVMCWGRNGFGQLGDGT--TTDRSTPVAVSGLTS-GV 120

Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
              A G   T  L   G V    WG++   +LG  T  +   P  + G      V  IAA
Sbjct: 121 TAIAAGYAHTCALMSSGGV--MCWGDNWSGQLGDGTTTDRSTPVAVSGLASG--VTAIAA 176

Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
           G  +  A   + S   V   G    G+LG G+ TD   P  +     L      +AAG  
Sbjct: 177 GDDHTCA---RTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSG---LGSGVTAIAAGGS 230

Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSE 328
           H   +   G V  WG    G LG G     S P  V  L + V AI  A G + T   + 
Sbjct: 231 HTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAI--AAGGFHTCARTS 288

Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
            G V  +G   S  LG     DG     +   TP  V+ L      V  I+  +S     
Sbjct: 289 SGGVMCWGANWSGQLG-----DGTTTARS---TPVAVSGLA---SGVTAIAAGDS----- 332

Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           HT ALT SG ++ +G    GQLG       T+R  P  V
Sbjct: 333 HTCALTSSGGVWCWGYNFFGQLGD---GTTTDRSTPVAV 368



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 108/250 (43%), Gaps = 15/250 (6%)

Query: 47  QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGA 104
            AIA  G H+ A+TS G V  +G+N SGQLG GTT     P  +  L  G+  I  AAG 
Sbjct: 529 TAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSGVMAI--AAGD 586

Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
             T  ++ +G V+ +G +S G+   G   T   ++P  V  L +  V   A G+F T  L
Sbjct: 587 LHTCALTSSGGVWCWGANSSGQLGDGT--TTARSTPVAVSGLPS-GVTAIAAGSFHTCAL 643

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
           +  G V+ +      +LG  +  +   P  + G      V  IAAG  +  A   +    
Sbjct: 644 TSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPSG--VTAIAAGRFHTCA---RTGSG 698

Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
            V+       G+LG GS TD   P  +     L      +AAG  H       G V  WG
Sbjct: 699 GVWCWASNRYGQLGDGSYTDSSTPVAVSG---LVSGVTAIAAGVVHTCARTSSGGVMCWG 755

Query: 285 WGRYGCLGHG 294
               G LG G
Sbjct: 756 ANSSGQLGDG 765


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 17/307 (5%)

Query: 43  RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
           RE  + IA G  H++ +T  G VY+ G N+ GQLG  + E+ +   P+        +  +
Sbjct: 129 REMLKGIACGGAHTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVRIPKEAMHIS 187

Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
           AG   + +++  G++Y +G +S G+   G +  K V  P  V+SL  I + +AA+G+  +
Sbjct: 188 AGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHS 247

Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-------PNDVEPHP-LLGTLENIPVVQIAAGYCY 213
             ++  G V+++  G   RLGH  E        +  E  P L+  LE I V  +AAG   
Sbjct: 248 IAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAG--- 304

Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
           +L  AC     AVY  G     ++  G       P LI    LL+ +   VA G +H  V
Sbjct: 305 MLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLIS--TLLDCEE--VACGGYHTCV 360

Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
           + + G + +WG    GCLG+G+     +P+ V+       +   +  +        G ++
Sbjct: 361 LTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIF 420

Query: 334 SFGCGES 340
           ++G G S
Sbjct: 421 TWGWGGS 427



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 22/294 (7%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG G  + +W P P  S     +   A G   T+ ++++G+VYA G ++FG 
Sbjct: 102 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG- 160

Query: 127 AEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
            + G+   K   T P  V   K    + A  G   + V++ +G +Y +   ++ +LG   
Sbjct: 161 -QLGISDEKRFSTEPVEVRIPKEAMHISA--GYNHSCVVTADGELYMWGVNSNGQLGLGK 217

Query: 186 EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 240
           +       P  + +L+ I + + A G  + +A+A    G  V+S G G  G+LGHG    
Sbjct: 218 KSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVA---DGGEVFSWGDGRSGRLGHGHEST 274

Query: 241 -----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
                  T E  PRLI++ + + ++   VAAG  H+A V ++G V  +G      +  G 
Sbjct: 275 FLGFLKSTSEHTPRLIKELEGIKVKH--VAAGMLHSACVDENGAVYIFGERATNRVSFGE 332

Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
               + P ++  L D +   VA G Y T V+++ GD+YS+G  E+  LG+ + +
Sbjct: 333 ANKATTPSLISTLLDCE--EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTS 384



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 41/254 (16%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG---------TTEEEWRPRPIRSLQGIRI 97
           +A  G  HSIAV   G V+S+G   SG+LGHG          +  E  PR I+ L+GI++
Sbjct: 239 RAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKV 298

Query: 98  IQAAAGAGRTMLISDAGQVYAFGKD-----SFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
              AAG   +  + + G VY FG+      SFGEA          T+P L+ +L +    
Sbjct: 299 KHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANK-------ATTPSLISTLLD--CE 349

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
           + A G + T VL++ G +Y++    +  LG+ +      P  + G     PV +++ G+ 
Sbjct: 350 EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWK 409

Query: 213 YLLALACQPSGMAVYSVGCG------------LGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
           +  A+    SG A+++ G G             GG+LGHGS  D   P  I+  +  N++
Sbjct: 410 HTAAI----SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGE--NVK 463

Query: 261 PVVVAAGAWHAAVV 274
            V V+ G  H   +
Sbjct: 464 VVQVSCGFNHTGAI 477



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 145/335 (43%), Gaps = 50/335 (14%)

Query: 111 SDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
           SD+G+ +   +G   FG    G   ++   SP    S     +   A G   T  L+  G
Sbjct: 92  SDSGKRFGAVWGNGDFGRLGLGNLDSQW--SPVPCSSFDREMLKGIACGGAHTLFLTESG 149

Query: 169 RVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMA 225
           RVY     N  +LG   E     EP  +      IP   + I+AGY +   +        
Sbjct: 150 RVYATGLNNFGQLGISDEKRFSTEPVEV-----RIPKEAMHISAGYNHSCVVTADGE--- 201

Query: 226 VYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
           +Y  G    G+LG G ++ +    P  ++    + ++    A G+ H+  V   G V +W
Sbjct: 202 LYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRA--ALGSDHSIAVADGGEVFSW 259

Query: 284 GWGRYGCLGHGNEEC---------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
           G GR G LGHG+E           E  P++++ L  +K  HVA G   +  V E+G VY 
Sbjct: 260 GDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYI 319

Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
           FG  E A+   N ++ G+ N+     TP L+++L    E               HT  LT
Sbjct: 320 FG--ERAT---NRVSFGEANK---ATTPSLISTLLDCEEVACG---------GYHTCVLT 362

Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVD 428
           + G LY++G+ + G LG    N  T   + PERV+
Sbjct: 363 KGGDLYSWGSNENGCLG----NGSTSVSHLPERVE 393


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 153/364 (42%), Gaps = 65/364 (17%)

Query: 34  LLAGEAC---CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           L+ G+ C   CR E  +A AG  +++     G V+++G+NS GQLG GTT       P+ 
Sbjct: 25  LVNGDGCSFVCRLETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVD 84

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
              G+ + + AAG    + +     ++A+G++  G+ + GV  T    SP  V     + 
Sbjct: 85  FSNGMVVKRVAAGGSHALAVLSDKTLWAWGRN--GDGQLGVGSTTSSFSPVKVPGRTGVE 142

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-----------------H 193
           VV  A   F +A +  +G+V T+ +    +LG+ +  +   P                 H
Sbjct: 143 VVAMAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYH 202

Query: 194 PL------------------------LGTLENIP--------VVQIAAGYCYLLALACQP 221
            L                          T  N P        V  ++AG  + LAL    
Sbjct: 203 MLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDG 262

Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
           +   V++ G    G+LG GS TD   P      Q+  L  VV VAAG +HA  +  DG V
Sbjct: 263 T---VWAWGQNNQGQLGIGSFTDRPSP-----VQVPRLTGVVEVAAGQFHALALRLDGTV 314

Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
             WG+   G LG G     S P  V  L  V  + VA GD  +  V  DG VY++G   +
Sbjct: 315 WAWGFNGSGQLGDGTTLSRSSPVQVPGLTGV--VSVAAGDGHSVAVLSDGRVYTWGRNSA 372

Query: 341 ASLG 344
             LG
Sbjct: 373 GQLG 376



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 175/406 (43%), Gaps = 41/406 (10%)

Query: 34  LLAGEAC---CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
           L+ G+ C   CR E  + +AG   ++   + G ++++G N SGQLG  +T     P  + 
Sbjct: 448 LVNGDGCSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVS 507

Query: 91  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
           +     +   AAG   ++ +   G+++++G +S   ++ GV    L +            
Sbjct: 508 TASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSL--SQLGVSRDTLGSRASPALVSGVSG 565

Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP-------NDVEPHPLLGTLENIP 203
           VV  A G   + V+   G+V  + +    ++G    P       +  EP  L        
Sbjct: 566 VVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLF------S 619

Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
           ++ +AAG  + LAL    S   V++ G    G+LG GS  D   P  + +   +    V 
Sbjct: 620 ILGVAAGQNHSLALR---SDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRV----VS 672

Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
           V AG +H+  +  DG V  WG    G LG G    + +P  V  L+ V  + VA G   +
Sbjct: 673 VVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLSGV--VAVAAGGRHS 730

Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 383
             +  DG V+++G   +  +       G G+  + +  P  V  L    + V+ ++  ++
Sbjct: 731 LALRADGTVWAWGYNSNGQI-------GDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDT 783

Query: 384 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
                H+ A+   G++  +G  D GQLG     N T+R  P  V +
Sbjct: 784 -----HSVAVLSGGRVRTWGQNDSGQLG--YATNNTDRSTPGEVTL 822



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 138/276 (50%), Gaps = 28/276 (10%)

Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGY 211
           +AA G  +T +   +G V+T+   +  +LG  T    +   P+     N  VV+ +AAG 
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPV--DFSNGMVVKRVAAGG 98

Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
            + LA+    S   +++ G    G+LG GS T    P  ++      ++ V +AA  +++
Sbjct: 99  SHALAVL---SDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNS 153

Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
           A V  DG+V TWG+  YG LG+G+   +S P  V AL+D+K + V  G Y    +   G 
Sbjct: 154 AAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSV--GKYHMLALRSGGT 211

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           V+++G   S  LG  + ++ Q N      TPQ    LK V      +S  +S     H+ 
Sbjct: 212 VWAWGFNGSGQLGLGSGSNTQYN------TPQQAAVLKGV----ASVSAGDS-----HSL 256

Query: 392 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
           AL   G ++A+G  ++GQLGI    + T+R +P +V
Sbjct: 257 ALRWDGTVWAWGQNNQGQLGI---GSFTDRPSPVQV 289



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 22/259 (8%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           +S AV S G V ++G N+ GQLG+G+T ++  P  + +L  I+ +  + G    + +   
Sbjct: 152 NSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGV--SVGKYHMLALRSG 209

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+A+G +  G+   G        +PQ    LK +  V A  G+  +  L  +G V+ +
Sbjct: 210 GTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSA--GDSHSLALRWDGTVWAW 267

Query: 174 SWGNDARLG---HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
              N  +LG       P+ V+   L G      VV++AAG  + LAL    +   V++ G
Sbjct: 268 GQNNQGQLGIGSFTDRPSPVQVPRLTG------VVEVAAGQFHALALRLDGT---VWAWG 318

Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
               G+LG G+      P      Q+  L  VV VAAG  H+  V  DGRV TWG    G
Sbjct: 319 FNGSGQLGDGTTLSRSSP-----VQVPGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAG 373

Query: 290 CLGHGNEECESVPKVVQAL 308
            LG G+++    P   QAL
Sbjct: 374 QLGDGSQDALPHPTPGQAL 392



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 154/380 (40%), Gaps = 46/380 (12%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
           AG GHS+AV S G VY++G NS+GQLG G+ +    P P ++L  +  +           
Sbjct: 350 AGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHPTPGQAL--LPFVCGNHRLEPEEQ 407

Query: 110 ISDAGQVYAFGKDSFGEAEYGV----QGTKLVTSP----QLVESLKNIFVV-----QAAI 156
             D   +   G  +   AE G      G K          LV      FV      +   
Sbjct: 408 CDDGNSINGDGCSALCLAESGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVA 467

Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
           G  FT     +G+++ +      +LG  +  N + P   + T     V  +AAG  + LA
Sbjct: 468 GAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVS-VSTASLTDVKNVAAGGFHSLA 526

Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
           L    S   ++S G     +LG  SR D    R            V VAAG  H+ VV  
Sbjct: 527 LG---SDGKLWSWGSNSLSQLGV-SR-DTLGSRASPALVSGVSGVVAVAAGETHSLVVLS 581

Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKV-----VQALNDVKAIHVATGDYTTFVVSEDGD 331
           +G+V  WG+  YG +G G   C  VP        +  N    + VA G   +  +  DG 
Sbjct: 582 NGKVSAWGYNGYGQIGDG---CSPVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638

Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
           V+++G   S  LG  ++ D           P  V  L +V      +S+   +Y   H+ 
Sbjct: 639 VWAWGRNNSGQLGDGSLVD--------RTRPVQVARLNRV------VSVVAGLY---HSL 681

Query: 392 ALTESGKLYAFGAGDKGQLG 411
           AL   G ++A+G    GQLG
Sbjct: 682 ALRSDGTVWAWGDNGSGQLG 701


>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
          Length = 521

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L    I+ AA G   T+ +++ 
Sbjct: 160 HSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTET 219

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 220 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 277

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 278 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 337

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 338 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTC 394

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 395 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 447

Query: 331 DVYSFG 336
              S+G
Sbjct: 448 STISWG 453



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 206 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 264

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 265 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 323

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 324 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 381

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++   L   +
Sbjct: 382 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQ--DLCGWR 430

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
              +A G   + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 431 IRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 489

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 490 MGYAHSLVIARD 501



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 138 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-TLWSWGRNEKGQLGHGDTKRVEAPKLI 195

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 196 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 251

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 252 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 311

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 312 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 362



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG ++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 163 LITTEGTLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 221

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 222 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 274

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 275 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 334

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 335 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAA 386

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 387 QIYAGYTC-----SFAVSEVGGLFFWGA 409



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  +Q  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 373 RLVKLFDFPG-----RGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 421

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 422 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 481

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 482 GIFTEQVAMGYAHSLVIARD 501



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 136 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGTLWSWGRNEKGQ 180

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 181 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 225

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 226 GENKMGQLGL---GNQTD 240


>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
          Length = 488

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 127 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 186

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 187 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 244

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 245 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 304

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 305 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 361

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 362 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 414

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 415 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 463



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 173 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 231

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 232 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 290

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 291 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 348

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 349 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 399

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ + +  VA
Sbjct: 400 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 456

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 457 MGYSHSLVIARD 468



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 105 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 162

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 163 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 218

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 219 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 278

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 279 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 329



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 47/270 (17%)

Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
           + +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL   
Sbjct: 128 SLLITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 186

Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
            S   V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 187 GS---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 239

Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 240 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 299

Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 300 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 351

Query: 375 VVQISLTNSIYWNAHTFALTESGKLYAFGA 404
             QI    +      +FA++E G L+ +GA
Sbjct: 352 ASQIYAGYTC-----SFAVSEVGGLFFWGA 376



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 43  RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
           R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+ ++ L G RI   A 
Sbjct: 350 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 403

Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
           G    ++ +D   +      +FGE  YG    K  T+ Q V++L  IF  Q A+G   + 
Sbjct: 404 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 463

Query: 163 VLSRE 167
           V++R+
Sbjct: 464 VIARD 468



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 103 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 147

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 148 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 192

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 193 GENKMGQLGL---GNQTD 207


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H +A+ S G  +++G NS GQLG G     +  P+ +RSL+GI + Q AAG  
Sbjct: 23  QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            +  +S +G V+ +G ++ G+   G+   K   SP  V+ L+   VV  + G   TAVL+
Sbjct: 83  HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
           + G V+TF  G+  +LGH +  ++V P  +L  L    V QIA G  + LA    PS   
Sbjct: 141 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197

Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
           +Y+ GCG  G+LG G   + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P   
Sbjct: 7   VAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQR- 65

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   +
Sbjct: 66  VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119

Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
           LL  Q VV ++ G  H AV+ + G V T+G G YG LGH +   E  P+ V  L   +  
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVT 179

Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
            +A G  +T   V   G +Y+FGCG    LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 23/182 (12%)

Query: 248 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 305
           PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V
Sbjct: 10  PRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66

Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 365
           ++L  +    VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q  
Sbjct: 67  RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124

Query: 366 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 425
                   +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP 
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV---NPR 168

Query: 426 RV 427
           RV
Sbjct: 169 RV 170



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 253
           L+  L    ++Q++ G  + LALA   S    ++ G    G+LG G     +  P+ +  
Sbjct: 12  LIQKLNQQTILQVSCGNWHCLALA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 68

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
            + + L  V  AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K 
Sbjct: 69  LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126

Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 373
           ++++ G+  T V+++ G V++FG G    LGH+++ D    R            L+ +  
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV----------LELMGS 176

Query: 374 RVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 411
            V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 177 EVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)

Query: 86  PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
           PR I+ L    I+Q + G    + ++  GQ + +GK+S G+   G +      SPQ V S
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68

Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
           L+ I + Q A G   +  LS  G V+ +   N  +LG   E  D E    +  L    VV
Sbjct: 69  LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127

Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
            I+ G  +   L    SG  V++ G G  G+LGH S  DE +PR +   +L+  +   +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182

Query: 266 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
            G  H  A V   G +  +G G  G LG G   N +C S  K
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 46  SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
           +Q  AG  HS A++  G V+ +G N++GQLG    ++   P  ++ L+  +++  + G  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
            T +++ +G V+ FG  S+G+  +     ++  +P+ V  L    V Q A G   T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192

Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
              G +Y F  G   +LG     N   P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 25/302 (8%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
           G  H++ +T KG V++ G NSSGQLG     E  + P  +        +  AAG   +  
Sbjct: 69  GGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPD-PCVHIAAGRYHSAA 127

Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
           I+ +G+ Y +G++S G+   G +   +  +PQ +ESL  + +   A+G   +  L+  G+
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQ 187

Query: 170 VYTFSWGND--ARLGH---------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
           V   SWG +    LGH           + N+  P  ++  LE + +  ++AG   L+  A
Sbjct: 188 V--LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPR-IIHCLEKLQIRSVSAG---LVHSA 241

Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
           C      +YS G G   +LG G+  D   P  I     ++     ++ G +H   + QDG
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS----SISCGGYHTGAITQDG 297

Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            + TWG   +GCLG G     S P  +++L +     ++ G   T  +S DG ++S+G G
Sbjct: 298 DIYTWGSNEHGCLGSGF-RASSKPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355

Query: 339 ES 340
            S
Sbjct: 356 GS 357



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 33/305 (10%)

Query: 50  AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 107
           AG  HS A+TS G  Y +G NS GQLG G   +     P+ + SL G+R+   A G   +
Sbjct: 120 AGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHS 179

Query: 108 MLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
           + +++ GQV ++G + FG   +G         + T   T P+++  L+ + +   + G  
Sbjct: 180 LGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT-PRIIHCLEKLQIRSVSAGLV 238

Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
            +A     G +Y+F  G+  +LG     +  +P P    + ++P V   +   Y      
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP----IPDLPRVSSISCGGYHTGAIT 294

Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
           Q     +Y+ G    G LG G R   K  RL    +    +   ++ G  H A +  DG 
Sbjct: 295 QDG--DIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSE---ISCGWKHTAAI-SDGY 348

Query: 280 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
           + +WGW G YG            LG G +     P  ++  + + A+HV+ G   T  + 
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408

Query: 328 EDGDV 332
           E+ ++
Sbjct: 409 EEIEI 413



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 19/288 (6%)

Query: 67  FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
           +G+   G+LG   +  ++ P   R+L+       + G   T++++D G+V+A G +S G+
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92

Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
               ++  +    P  V    +   V  A G + +A ++  G  Y +   ++ +LG    
Sbjct: 93  LGVPLK-RESSFDPVEVHGFPDP-CVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150

Query: 187 PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--- 242
              V   P  + +L  + +  +A G  + L LA   +G  V S G    G LGHG     
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ETGQ-VLSWGTNRFGCLGHGEMTGF 207

Query: 243 ------TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
                 T+E  PR+I   + L ++   V+AG  H+A     G + ++G G    LG GN 
Sbjct: 208 FDFFKDTNEYTPRIIHCLEKLQIRS--VSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN 265

Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
              S P  +  L  V +I  + G Y T  +++DGD+Y++G  E   LG
Sbjct: 266 NDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGSNEHGCLG 311



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 42/287 (14%)

Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG----HHTEPNDVEPHPL 195
           P L  +L++      + G   T +L+ +GRV+     +  +LG      +  + VE H  
Sbjct: 52  PVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGF 111

Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQ 253
                  P V IAAG  +  A+    S    Y  G    G+LG G R    +  P+ +E 
Sbjct: 112 -----PDPCVHIAAGRYHSAAIT---SSGETYVWGRNSEGQLGLGKRAKSVYITPQKMES 163

Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG---------NEECESVPKV 304
              + L+   +A G  H+  + + G+V +WG  R+GCLGHG          +  E  P++
Sbjct: 164 LAGMRLK--ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRI 221

Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 364
           +  L  ++   V+ G   +    + G +YSFG G    LG        GN + +   P  
Sbjct: 222 IHCLEKLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLG-------LGNNN-DASQPCP 273

Query: 365 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
           +  L +V+      S++   Y   HT A+T+ G +Y +G+ + G LG
Sbjct: 274 IPDLPRVS------SISCGGY---HTGAITQDGDIYTWGSNEHGCLG 311



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 24/263 (9%)

Query: 166 REGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
           + G+ +   WGN    RLG     +  EP  L   LE+     ++ G  + L L  +   
Sbjct: 24  KAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGAHTLILTDKGR- 81

Query: 224 MAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
             V++ G    G+LG    R     P  +  F      P V +AAG +H+A +   G   
Sbjct: 82  --VFATGLNSSGQLGVPLKRESSFDPVEVHGFP----DPCVHIAAGRYHSAAITSSGETY 135

Query: 282 TWGWGRYGCLGHGNEECESV---PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
            WG    G LG G +  +SV   P+ +++L  ++   +A G   +  ++E G V S+G  
Sbjct: 136 VWGRNSEGQLGLG-KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTN 194

Query: 339 ESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
               LGH  +       +  N  TP+++  L+++  R V   L        H+    +SG
Sbjct: 195 RFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLV-------HSACADDSG 247

Query: 398 KLYAFGAGDKGQLGIELVNNQTE 420
            +Y+FG G   QLG+   N+ ++
Sbjct: 248 TIYSFGQGSMCQLGLGNNNDASQ 270


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 11/287 (3%)

Query: 57  AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
           A T +  V+ +G N   QLG     +   P    +L  + ++Q A G+     ++  G+V
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 480

Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
           YA G+ + G    G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++ 
Sbjct: 481 YACGEATNGRLGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 539

Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
            G+D +LGH +  N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  
Sbjct: 540 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 595

Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
           G+LGHG  T +  P++++   LL  + + VA G+  A  +    +G V +WG G +G LG
Sbjct: 596 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 653

Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
            G  E  ++P+ ++ LN      +  G   +  +++ G V+++G G 
Sbjct: 654 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGR 700



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 169 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
           R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 425 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 481

Query: 228 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
           + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 482 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 541

Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
             G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 542 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 601

Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 406
                    +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 602 D--------NTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 648

Query: 407 KGQLG 411
            G+LG
Sbjct: 649 FGKLG 653



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 13/246 (5%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
           Q   G     AVT +G VY+ G  ++G+LG G +      PR I +L    + + A  +G
Sbjct: 463 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSG 522

Query: 106 ---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
               T L  D G+V+++G+   G  + G         P+L+E+LK   +   A G+  +A
Sbjct: 523 GRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 579

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
            L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G      LA    
Sbjct: 580 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALTDE 638

Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
           G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G V 
Sbjct: 639 GL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGVVW 694

Query: 282 TWGWGR 287
           TWG GR
Sbjct: 695 TWGKGR 700


>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
          Length = 655

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 40/354 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR I  L    I+ AA G   T+ +++ 
Sbjct: 294 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 353

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 354 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 411

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 412 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 471

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 472 ANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 528

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 529 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 581

Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
              S+  G S + G     D   ++  +    Q V +L  +    V +  ++S+
Sbjct: 582 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 630



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 340 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 398

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 399 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 457

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 458 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 515

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 516 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 566

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 567 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 623

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 624 MGYSHSLVIARD 635



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 272 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 329

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 330 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 385

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 386 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 445

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 446 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 496



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL     
Sbjct: 297 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT---E 352

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
             +V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 353 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 408

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 409 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 468

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 469 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 520

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 521 QIYAGYTC-----SFAVSEVGGLFFWGA 543



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++      + E    P+
Sbjct: 507 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 555

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 556 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 615

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 616 GIFTEQVAMGYSHSLVIARD 635



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 270 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 314

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 315 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 359

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 360 GENKMGQLGL---GNQTD 374


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 31/340 (9%)

Query: 51   GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
            G  H++A+ S G ++++G N  GQLG  +T   + P  + +L     +  +AG   ++ +
Sbjct: 762  GENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLAL 819

Query: 111  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
               G V+AFG + +G+   G   ++   +P  V+ L  +  + A  G  F+  L  +G V
Sbjct: 820  KSDGTVWAFGYNGYGQLGDGTTSSQR--TPVQVKDLTGVVAIAA--GKDFSLALKSDGTV 875

Query: 171  YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
            +  SWG +    LG+ T      P  +    +   V  IAAG  + +AL    S   V++
Sbjct: 876  W--SWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFA 927

Query: 229  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
             G    G+LG+ S   +  P    Q  +  ++ +  AAG +H   +  DG V +WG+  Y
Sbjct: 928  WGYNGNGELGNSSTISQSTPV---QSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGY 982

Query: 289  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
            G LG+GN    SVP  +  L  + +I  A G+  +     DG +YS+G   +  LG+   
Sbjct: 983  GQLGNGNNTSRSVPAAIPGLASIASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTT 1040

Query: 349  AD--------GQGNRHANVLTPQLVTSLKQVNERVVQISL 380
             D        G     A+   P  V+ L+  ++ V  ++L
Sbjct: 1041 VDTNVPHKVIGPNINPADTTAPAAVSDLRVSSQNVRSLTL 1080



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 54   HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
            H++ + S G V+ +G N  GQLG GT+     P  + +L G+++I  A G   T+ +   
Sbjct: 715  HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 772

Query: 114  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
            G ++ +G + +G  + G   T    SP  V +L N   V A  G   +  L  +G V+ F
Sbjct: 773  GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 828

Query: 174  SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
             +    +LG  T  +   P     L G      VV IAAG  + LAL    S   V+S G
Sbjct: 829  GYNGYGQLGDGTTSSQRTPVQVKDLTG------VVAIAAGKDFSLALK---SDGTVWSWG 879

Query: 231  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
                G+LG+G+ T    P  ++   L +++   +AAG +H   + +DG V  WG+   G 
Sbjct: 880  QNTYGELGNGTTTRSSVP--VQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYNGNGE 935

Query: 291  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
            LG+ +   +S P V   +  +K I  A G Y T  +  DG V+S+G      LG+     
Sbjct: 936  LGNSSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLGN----- 987

Query: 351  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410
              GN  +  + P  +  L  +       +          + A    G LY++G    GQL
Sbjct: 988  --GNNTSRSV-PAAIPGLASIASIAAGEN---------QSIAYGNDGILYSWGRNANGQL 1035

Query: 411  G 411
            G
Sbjct: 1036 G 1036



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 125/256 (48%), Gaps = 17/256 (6%)

Query: 50   AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
            AG  HS+A+ S G V++FG N  GQLG GTT  +  P  ++ L G+  I  AAG   ++ 
Sbjct: 811  AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAI--AAGKDFSLA 868

Query: 110  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
            +   G V+++G++++GE   G   T   + P  V  L ++  + A  G++    L ++G 
Sbjct: 869  LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 924

Query: 170  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
            V+ + +  +  LG+ +  +  +  P+   +  I    IAAG  + LAL    S   V+S 
Sbjct: 925  VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALK---SDGTVWSW 977

Query: 230  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
            G    G+LG+G+ T    P  I     +      +AAG   +   G DG + +WG    G
Sbjct: 978  GYNGYGQLGNGNNTSRSVPAAIPGLASI----ASIAAGENQSIAYGNDGILYSWGRNANG 1033

Query: 290  CLGHGNEECESVPKVV 305
             LG+G     +VP  V
Sbjct: 1034 QLGNGTTVDTNVPHKV 1049



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 31/185 (16%)

Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
           G+ +    P        L   P+ V+    H   +  DG V  WG+  +G LG G     
Sbjct: 685 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNST 744

Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
           SVP  V  L  +K I  A G+  T  +  DG ++++G      LG     D    R++ V
Sbjct: 745 SVPGKVINLTGMKMI--AGGENHTVALRSDGTLHTWGYNGYGQLGD----DSTTTRYSPV 798

Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNA------HTFALTESGKLYAFGAGDKGQLGIE 413
                     QV+      +LTN   W A      H+ AL   G ++AFG    GQLG  
Sbjct: 799 ----------QVS------TLTN---WTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDG 839

Query: 414 LVNNQ 418
             ++Q
Sbjct: 840 TTSSQ 844


>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
          Length = 427

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)

Query: 54  HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
           HS+ +T++G ++S+G N  GQLGHG T+    PR +  L    I+ AA G   T+ +++ 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTET 125

Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
           G V+AFG++  G+   G Q   + +  Q++ + + I   + A G  F+ ++  +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183

Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
                 +LGH+++            D E  P              +  + N+ V  +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243

Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
             + L L  Q     V+S G G  G+LGH  + DE  PRL++ F         + AG   
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300

Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
           +  V + G +  WG        + + E    PK VQ L   +   +A G  ++ +V+ D 
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353

Query: 331 DVYSFG 336
              S+G
Sbjct: 354 STISWG 359



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 48  AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
           A  G  H++A+T  G V++FG N  GQLG G  + +  P P + +  G  I + A GA  
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170

Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
           +M++   G +Y+FG   +G+  +   G K +   Q +E                      
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229

Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
             + N+ V   A G   T VL  + RV+++ +G   RLGH  + +++ P   L  L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287

Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
                QI AGY       C     AV  VG        + SR    +P+ ++      ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338

Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
            +        + +V  D    +WG    +G LG+G+ + +S    + V+ L+ +    VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 395

Query: 318 TGDYTTFVVSED 329
            G   + V++ D
Sbjct: 396 MGYSHSLVIARD 407



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 101

Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157

Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 28  KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
           +LV  F   G     R  SQ  AG   S AV+  G ++ +G+ ++ +      E    P+
Sbjct: 279 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 327

Query: 88  PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
            ++ L G RI   A G    ++ +D   +      +FGE  YG    K  T+ Q V++L 
Sbjct: 328 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 387

Query: 148 NIFVVQAAIGNFFTAVLSRE 167
            IF  Q A+G   + V++R+
Sbjct: 388 GIFTEQVAMGYSHSLVIARD 407



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
           LGH     G   R   V  P+LV  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLVEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 403 GAGDKGQLGIELVNNQTE 420
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 158/316 (50%), Gaps = 22/316 (6%)

Query: 51  GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
           G  H+  +   G V++FG N+ GQLG G T+   +P  I+SL+  ++ Q A G   T+L 
Sbjct: 33  GDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGRSHTLLA 92

Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
           +++G++Y+FG ++  +   G+   K V SP +++ L++  V   + G + + VL+ +G V
Sbjct: 93  TESGKIYSFGCNNDRQLGLGLDDEK-VCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSV 151

Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSV 229
           Y +  G + +LG      DV  H     L+ +  VV IA GY Y  AL    +G  + + 
Sbjct: 152 YLWGGGEEGQLGF---GEDVTKHETPERLDVDDEVVCIACGY-YHTALVT--AGGKLLTF 205

Query: 230 GCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
           G    GKLG GS T D   P++++  +      V VA G  H  A+ G    V T+G G 
Sbjct: 206 GETDEGKLGRGSDTGDNCLPKVVDGIE---GHVVSVACGGAHTVAITGW--LVYTFGNGS 260

Query: 288 YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
            G LGHGN   ++  P  +      K    + G+  T +V++ G +++ G G      H 
Sbjct: 261 SGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGENHTALVTDRGQLWTCGDGR-----HG 315

Query: 347 AIADGQGNRHANVLTP 362
            +A G+ N  AN   P
Sbjct: 316 KLALGEEN-FANQFKP 330



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 27/319 (8%)

Query: 96  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
           +++  + G   T L++  G+V+ FG +++G  + G+  TK VT P  ++SLK   V Q A
Sbjct: 26  KVLHISCGDEHTSLLAGDGRVFTFGDNAWG--QLGLGHTKPVTKPTRIKSLKAEKVHQVA 83

Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
            G   T + +  G++Y+F   ND +LG   +   V    ++  LE+  V  ++AG  +  
Sbjct: 84  CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSC 143

Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
            L  + S   VY  G G  G+LG G   T  + P  ++    ++ + V +A G +H A+V
Sbjct: 144 VLTDKGS---VYLWGGGEEGQLGFGEDVTKHETPERLD----VDDEVVCIACGYYHTALV 196

Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
              G++ T+G    G LG G++  ++ +PKVV  + +   + VA G   T  ++    VY
Sbjct: 197 TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAIT-GWLVY 254

Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
           +FG G S  LGH       GN      TP  +   K    R              HT  +
Sbjct: 255 TFGNGSSGQLGH-------GNMLLQADTPHKIVWQKPTKVRSASCG-------ENHTALV 300

Query: 394 TESGKLYAFGAGDKGQLGI 412
           T+ G+L+  G G  G+L +
Sbjct: 301 TDRGQLWTCGDGRHGKLAL 319



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 22/257 (8%)

Query: 47  QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAG 105
           Q   G  H++  T  G +YSFG N+  QLG G  +E+   P  I+ L+   +   +AG  
Sbjct: 81  QVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMY 140

Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
            + +++D G VY +G    G+  +G   TK  T  +L    +   VV  A G + TA+++
Sbjct: 141 HSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDE---VVCIACGYYHTALVT 197

Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
             G++ TF   ++ +LG  ++  D     ++  +E   VV +A G  + +A+    +G  
Sbjct: 198 AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACGGAHTVAI----TGWL 252

Query: 226 VYSVGCGLGGKLGHGS---RTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGR 279
           VY+ G G  G+LGHG+   + D  H +++ Q      +P  V   + G  H A+V   G+
Sbjct: 253 VYTFGNGSSGQLGHGNMLLQADTPH-KIVWQ------KPTKVRSASCGENHTALVTDRGQ 305

Query: 280 VCTWGWGRYGCLGHGNE 296
           + T G GR+G L  G E
Sbjct: 306 LWTCGDGRHGKLALGEE 322



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 16/178 (8%)

Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
           +F +   + + ++ G  H +++  DGRV T+G   +G LG G+ +  + P  +++L   K
Sbjct: 19  KFWIREDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEK 78

Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
              VA G   T + +E G +YSFGC     L       G G     V +P   T +K + 
Sbjct: 79  VHQVACGRSHTLLATESGKIYSFGCNNDRQL-------GLGLDDEKVCSP---TVIKGLE 128

Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
              V++ L+  +Y   H+  LT+ G +Y +G G++GQLG     + T+   PER+D+D
Sbjct: 129 SHAVKM-LSAGMY---HSCVLTDKGSVYLWGGGEEGQLGFG--EDVTKHETPERLDVD 180


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.135    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,123,500,378
Number of Sequences: 23463169
Number of extensions: 307741785
Number of successful extensions: 800090
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3387
Number of HSP's successfully gapped in prelim test: 1923
Number of HSP's that attempted gapping in prelim test: 696235
Number of HSP's gapped (non-prelim): 37690
length of query: 432
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 287
effective length of database: 8,957,035,862
effective search space: 2570669292394
effective search space used: 2570669292394
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)