BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014023
(432 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
VP + +L + + V G + +++ G VY++G G+ LGH + +V
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4239
Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4240 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 407
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287
Query: 408 GQLG 411
GQ G
Sbjct: 3288 GQQG 3291
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4215
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325
Query: 396 SGKLYA 401
+GKL A
Sbjct: 4326 AGKLPA 4331
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720
Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
H ALTE +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 14/298 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ G+ RLGH ++ + +P + G L +V +A G + LA+ SG VY+
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3281
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G G+ G+G+ T + P L++ +
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3308
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)
Query: 164 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4003
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
LGH+ D L P+LV +L+ RV+ I+ + +A T LT+ +++
Sbjct: 4124 RLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVWS 4170
Query: 402 FGAGDKGQLG 411
+G GD G+LG
Sbjct: 4171 WGDGDYGKLG 4180
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L++ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 359
VP + +L + + V G + +++ G VY++G G+ LGH + +V
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4237
Query: 360 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4238 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 395
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323
Query: 396 SGKLYA 401
+GKL A
Sbjct: 4324 AGKLPA 4329
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 409 QLG 411
Q G
Sbjct: 3288 QQG 3290
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 39/325 (12%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719
Query: 385 YWNAHTFALTESGKLYAFGAGDKGQ 409
H ALTE +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3282
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3167 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ G+ RLGH ++ + +P + G L +V +A G + LA+ SG VY+
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3280
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G G+ G+G+ T + P L++ +
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3307
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 19/250 (7%)
Query: 164 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT--- 4001
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 342 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 401
LGH+ D L P+LV +L+ RVV I+ + +A T LT+ +++
Sbjct: 4122 RLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWS 4168
Query: 402 FGAGDKGQLG 411
+G GD G+LG
Sbjct: 4169 WGDGDYGKLG 4178
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308
Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 408
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358
Query: 409 QLGI 412
QLGI
Sbjct: 359 QLGI 362
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 187
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
+G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 248 YGWSKYGQLGHGDLEDH--------LIPHKLEALS--NSFISQISGG----WR-HTMALT 292
Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
GKLY +G GQ+G V N ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 389 HTFALTESGKLYAFGAGDKGQLG 411
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 18/345 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
G G N +V P LVT L+ N R + +S W A
Sbjct: 4324 GL-----GHTN---HVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 229 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 404
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 405 GDKGQLGIELVNNQTERGNPERVDI 429
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 157
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 158 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 276 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307
Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTE 420
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
V F WG + +LG + L+ +L IP +Q+AAG + ++L L SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG D P L++ L + + V + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
G YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 419 TERGN 423
T +GN
Sbjct: 340 TVKGN 344
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
V F WG + +LG E L+ +L IP +Q+AAG + ++L L SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG D P L++ L + + V + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
G YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 419 TERGN 423
T +GN
Sbjct: 340 TVKGN 344
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 19/300 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
V F WG + +LG T+ LL +L IP +Q+AAG + ++L L SG A
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG D P L++ L + + V + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
G YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 363
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 418
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 419 TERGN 423
T +GN
Sbjct: 340 TVKGN 344
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+V PQ+ + + V + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 77
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 191
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 394
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 395 ESGKLYAFGAGDKGQLG 411
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 44 ENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E +Q G H++A V S G++Y+FG + GQLG G T P P++ Q +A
Sbjct: 295 EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSA 354
Query: 103 GAGRTMLISDAGQVYAFGKDSF 124
A R Q+++ G +F
Sbjct: 355 RADR-FKYHIVKQIFSGGDQTF 375
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4050 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 4110 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4167
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4168 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4223
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4224 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4281
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 358
+P +++L + + V G + +++ G VY++G G+ LGH ++ +
Sbjct: 4282 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DH 4333
Query: 359 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
V P+ V +L+ ++++ I+ T S+ H A ++SG++Y +G D+GQLG
Sbjct: 4334 VRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 4379
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 31/380 (8%)
Query: 36 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 2964 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 3019
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R I A G+ ++S G+VYA G+ + G GV T V P + L+ V + A
Sbjct: 3020 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLRQYVVKKVA 3077
Query: 156 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 3136
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
A++ Q +Y+ G G G+LGHG T + P+L+ L + V VA G+ A
Sbjct: 3137 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 3191
Query: 274 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 3251
Query: 332 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 391
V+++G G+ LGH G++H V PQ + L+ RV+ +++ H
Sbjct: 3252 VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 3296
Query: 392 ALTESGKLYAFGAGDKGQLG 411
A+T++G++YA+G D GQ G
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQG 3316
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4095 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4154
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 4155 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4212
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4270
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L L V V G+ + + + G V TWG G + LGH
Sbjct: 4271 YGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4328
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG + Q
Sbjct: 4329 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 4387
Query: 354 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 396
P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4388 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4416
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 155/342 (45%), Gaps = 22/342 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3139
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3253
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3254 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-----VSEDGDVYSFGCGESAS 342
+G G GN P +V L+ V VA G + S D + +
Sbjct: 3312 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEE-------KRGP 3364
Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
+ ++ D G + + + +LKQ + + Q SL+ S+
Sbjct: 3365 VPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESL 3406
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 37/339 (10%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 153
+I Q A + +++S G++Y + + + EAE P +E + ++F+
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 619
Query: 154 A--AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 620 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 677
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 678 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 734
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 792
Query: 332 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
+Y++ G++ LGH + QG P+LV+SL+ ++R+V ++++ AH
Sbjct: 793 LYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 838
Query: 391 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
AL+ SG+++ +G D Q+ V+++ P V +
Sbjct: 839 LALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSL 877
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3235 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3294
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3344
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 729 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 786
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQ+Y +GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 843
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
G V F WG ND++ P V PLL T L ++P + C
Sbjct: 844 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 887
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 791
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
++YT WG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 792 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 842
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ S YS+G+ +LGHG T P I +L+ + G + I+
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G + +G+ ++ +G + + P LV +L + VV A+ G+ + L+ EG V+
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
+ G+ +LG+ ++P +E++P VQ + AG + +AL+ + + +
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSVALSSE-GQLYTWGKA 799
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
LG +L S PRL+ Q + V VA H + G V +GWGR
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQHKRI--VDVAVSVAHCLALSSSGEV--FGWGR 852
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
+ L G G H NV P + L+Q + V + H ALT GK+
Sbjct: 3048 NGRL-------GLGVTH-NVPLPHQLPVLRQYVVKKVAVH-----SGGKHALALTLDGKV 3094
Query: 400 YAFGAGDKGQLGIELVNNQTERGNPERVD 428
+++G G+ G+LG N+T P V+
Sbjct: 3095 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3120
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 102
+ AG S+A++S+G +Y++G + LGH E + PR + SLQ RI+ A
Sbjct: 776 RVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 833
Query: 103 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 143
+ +S +G+V+ +G+ DS V L+ +P LV
Sbjct: 834 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 875
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 30/334 (8%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 373 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 405
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
++Q A+G + L L + V S G G+LG + P I+ + L + +
Sbjct: 25 LLQAASGERHSLLLL---TNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVD--L 79
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 322
V+ G H+ V GRV WG G G LG G +E PK + LND+K I V+ G Y
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 382
+ +S+D V+S+G L G G + +PQ V SL+ I L
Sbjct: 140 SLALSKDSQVFSWGKNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185
Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
AH+FAL+ G + +G+ GQL + N + P V
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 208
++QAA G + +L RV S G+++R LG P P+ LE + V ++
Sbjct: 25 LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 267
G + LA+ C V++ G G G+LG G + P+ I L +++ + V+ G
Sbjct: 82 CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCG 136
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 326
+H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
S G SFG G S S G A++ +N P V +LK + VV IS +
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245
Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
AHT LT+ GK++ FG GQLG + ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 16/289 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N SG LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N V+ IA G + ++A +G VY G G+LG GS
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMSIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q V A G H V+ +G++ WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
V D + A H A +T+ S+ G VY +G C G+S L H
Sbjct: 301 TPVVVEKDRIIEIAACHSA---HTSAAKSQGGHVYMWGQCRGQSVILPH 346
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
C + + +IA G S+AV G VY +G N +GQLG G++ + P + +LQGIR+
Sbjct: 201 CLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ A G T++++D GQ+YA+G +S+G+ G + + +P +VE I + A
Sbjct: 261 RVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSA 319
Query: 159 FFTAVLSREGRVYTFSWG 176
+A S+ G VY WG
Sbjct: 320 HTSAAKSQGGHVYM--WG 335
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P +V L + + +A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
+ GN+ TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 405 GDKGQLGIELVNNQT 419
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 16/315 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N SG LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N V+ IA G + ++A +G VY G G+LG GS
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q V A G H V+ +G++ WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRH 356
V D + A H A +T+ ++ G VY +G C G+S L H+ +
Sbjct: 301 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVF 357
Query: 357 ANVLTPQLVTSLKQV 371
A TP + L V
Sbjct: 358 ACFATPAVTWRLLSV 372
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF- 173
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Query: 174 -SWGNDARLGHHT 185
G L HHT
Sbjct: 336 QCRGQSVILPHHT 348
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
+ GN+ TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 405 GDKGQLGIELVNNQT 419
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 42/364 (11%)
Query: 46 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 124 SCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACG 183
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T+ +++ G VY FG++ G+ G Q T V SP ++ +V+ A G F+ +
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMI 241
Query: 164 LSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLE 200
+ +G +Y+F +LGH+++ D E P + +
Sbjct: 242 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVP 301
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
N+ +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 302 NVVARDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG 358
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+ G + + + G + WG + + + E PK VQ L K +A G
Sbjct: 359 ATQIYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGK 412
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
+ V ++D + G S + G D N+ + T Q V +L V V +
Sbjct: 413 SSIIVAADDSTI---SWGPSPTFGELGYGD---NKPKSSTTAQEVKTLDGVYSEQVVMGY 466
Query: 381 TNSI 384
++S+
Sbjct: 467 SHSL 470
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 112 PH-RYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169
Query: 252 EQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
E + V+VAA G H + ++G V T+G + G LG GN+ + N
Sbjct: 170 EGLG----EEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN 225
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
+ VA G + +V G++YSFGC E LGHN+ IA Q L P+ V
Sbjct: 226 GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRV 285
Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
+ + + + N + + HT L +++++G G G+LG
Sbjct: 286 AIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 37/140 (26%)
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
WG RYGCL +DV+ V +G + +++ +G ++S+G +
Sbjct: 110 WGPHRYGCL-----------------SDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDK 152
Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
LGH G R + P+L+ L + E +V + + HT ALTE+G +Y
Sbjct: 153 GQLGH-----GDTKR---LEAPKLIEGLGE--EVIVAAACGRN-----HTLALTENGTVY 197
Query: 401 AFGAGDKGQLGIELVNNQTE 420
FG GQLG NQT+
Sbjct: 198 TFGENKLGQLG---QGNQTD 214
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q G S A++ G ++ +G ++ + E P+
Sbjct: 347 RLVKLFDFPG-----RGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPK 395
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G +I A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 396 AVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLD 455
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
++ Q +G + V++R+
Sbjct: 456 GVYSEQVVMGYSHSLVIARQ 475
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + +A +G VY G G+LG G+
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
V D + I +T+ ++ G VY +G C G+S L H + A
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 360
Query: 360 LTPQLVTSLKQV 371
TP + L V
Sbjct: 361 ATPAVTWRLLSV 372
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 89
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 90 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 206
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 264
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 265 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 317
Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
+ H +A Q G V WG R
Sbjct: 318 STHTSAAKTQGGHVYMWGQCR 338
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 42 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98
Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321
Query: 387 NAHTFALTESGKLYAFG 403
+A A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283
Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
GQLG N++ + P V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 10/312 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + +A +G VY G G+LG G+
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 359
V D + I +T+ ++ G VY +G C G+S L H + A
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACF 360
Query: 360 LTPQLVTSLKQV 371
TP + L V
Sbjct: 361 ATPAVTWRLLSV 372
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 89
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 90 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 206
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 264
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 265 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 317
Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
+ H +A Q G V WG R
Sbjct: 318 STHTSAAKTQGGHVYMWGQCR 338
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 149
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 42 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98
Query: 150 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 386
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321
Query: 387 NAHTFALTESGKLYAFG 403
+A A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 286 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283
Query: 405 GDKGQLGIELVNNQTERGNPERVDID 430
GQLG N++ + P V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 40/354 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 219 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 276
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 337 ANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 393
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 394 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 446
Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
S+ G S + G D ++ + Q V +L + V + ++S+
Sbjct: 447 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 495
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 381 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 488
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 489 MGYSHSLVIARD 500
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 251 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310
Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
+ + + + N + + HT L +++++G G G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 385
Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
QI + +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 372 RLVKLFDFPG-----RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 420
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 481 GIFSEQVAMGYSHSLVIARD 500
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179
Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 224
Query: 403 GAGDKGQLGIELVNNQTE 420
G GQLG+ NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 160/369 (43%), Gaps = 59/369 (15%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T +G ++S+G N GQLGHG + P+ I SL+G + AA G T+ +++
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G VYAFG++ G+ G + + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI--TKVACGAEFSMIMDCKGNLYSF 269
Query: 174 SWGNDARLGHH-----------------------------TEPNDVEPHPLLGTLENIPV 204
+LGH+ T+ + P P N+ V
Sbjct: 270 GCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVP------NVVV 323
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
IA G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 324 RDIACGINHSLILDSQKR---VFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQI 380
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
AGA + V + G + WG + + + PK VQ L K +A G ++
Sbjct: 381 YAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSI 433
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
+V+ D S+ G S + G D N+ + T Q V +L + V I
Sbjct: 434 IVAADESTISW--GPSPTFGELGYGD---NKAKSSTTAQEVKTLDGIYSDQV-------I 481
Query: 385 YWNAHTFAL 393
N+HT +
Sbjct: 482 MGNSHTLVV 490
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 84 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
W P L G+++ A+G A ++LI+ G+++++G++ G+ +G K + P+
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG--DIKRIDVPK 185
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
L+ESLK V AA G T L+ G VY F +LG + D P P
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
P+ ++A G + + + C+ + +YS GC G+LGH S D K+
Sbjct: 245 QPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNS--DGKYIARAQRIEYDCELI 299
Query: 248 PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
R I F Q+L + VVV A G H+ ++ RV +WG+G YG LGH +
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQR 359
Query: 298 CESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 360 DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 46/313 (14%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
A G H++A+T G VY+FG N GQLG G + P P + L G I + A GA
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAE 255
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDG-KYIARAQRIEYDCELIARRIAIFIEKTKDGQ 314
Query: 145 --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
+ N+ V A G + +L + RV+++ +G RLGH + +++ P L L +
Sbjct: 315 ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR--LVKLFDF 372
Query: 203 P---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
P QI AG A++ + G+ + + SR +P+ ++ L
Sbjct: 373 PGRGAAQIYAGATCSFAVS-EMGGLFFWGA--------TNTSRDSTMYPKAVQ--DLCGW 421
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHV 316
+ +A G + +V D +WG +G LG+G+ + +S + V+ L+ + + V
Sbjct: 422 KVRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQV 480
Query: 317 ATGDYTTFVVSED 329
G+ T VV+ D
Sbjct: 481 IMGNSHTLVVARD 493
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V +A+G C +L G ++S G G+LGHG P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
E + V A G H + ++G V +G + G LG GN+ ++VP Q L +
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 312 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 366
+ I VA G + ++ G++YSFGC E LGHN+ IA Q + L + +
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 367 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
+ + + + N + + H+ L +++++G G G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ + +LGH + ++ L+ +L+ V A G + LAL S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
VY+ G G+LG G++TD P I L N QP+ VA GA + ++ G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE + + + + +V +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
A G + ++ V+S+G G LGH+ D + P+LV
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378
Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
QI + +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 340
WG RYGCL V+ VA+G + +++ +G ++S+G +
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170
Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
LGH I + P+L+ SLK E V + + HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215
Query: 401 AFGAGDKGQLGI 412
AFG GQLG+
Sbjct: 216 AFGENKMGQLGL 227
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q AG S AV+ G ++ +G+ ++ + + P+
Sbjct: 365 RLVKLFDFPG-----RGAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPK 413
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G ++ A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 414 AVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLD 473
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
I+ Q +GN T V++R+
Sbjct: 474 GIYSDQVIMGNSHTLVVARD 493
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 85 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 205 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 262
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 433
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 374
+A G ++ +V+ D S+ G S + G D ++ + Q V +L +
Sbjct: 434 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 487
Query: 375 VVQISLTNSI 384
V + ++S+
Sbjct: 488 QVAMGYSHSL 497
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 265
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 325 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 382
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 383 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 433
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 434 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 491 MGYSHSLVIARD 502
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 197 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 365
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312
Query: 366 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 411
+ + + + N + + HT L +++++G G G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 376
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387
Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGA 404
QI + +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 374 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 422
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 423 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 482
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 483 GIFSEQVAMGYSHSLVIARD 502
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181
Query: 343 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 226
Query: 403 GAGDKGQLGIELVNNQTE 420
G GQLG+ NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 27/318 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + LQG I Q +
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 432
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
G T+ ++D GQ+YAFG D YG G V+ P+++E ++ N F V Q +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSC 487
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLL 215
G+ VL+R VY++ G RLG +E + P + + I VQ +LL
Sbjct: 488 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLL 547
Query: 216 A-----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP---RLIEQFQLLNLQPVVVAAG 267
LAC + + + G + H + + + L +Q ++ +A G
Sbjct: 548 TQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR--TIAPG 605
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVV 326
H A + + GR+ T+G + G LG GN + + + L + I V+ GD T
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAA 665
Query: 327 SEDGDVYSFGCGESASLG 344
++D ++++G G + L
Sbjct: 666 TDDNHIFAWGNGGNGRLA 683
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 32/291 (10%)
Query: 138 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 184
++PQ ++ +K+ Q GN AV++ E +YT W N +LGH +
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVNMQGGTKLHGQLGHGDKASY 414
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+P VE L+ + Q++ G + + C +Y+ G G +G +
Sbjct: 415 RQPKHVE------KLQGKAIHQVSCGDDFTV---CVTDEGQLYAFGSDYYGCMGVDKVSG 465
Query: 245 EKHPRLIEQFQL--LNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P ++E QL PV V+ G H V+ ++ V +WG G YG LG +EE
Sbjct: 466 ---PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
P+ V + + V G TF++++ G V + G E LG N G N A
Sbjct: 523 PQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
P T+ + +++ + HT A+ E G+L FG GQLG+
Sbjct: 583 P--YTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV 631
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 39/290 (13%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPL 195
P+ VE L+ + Q + G+ FT ++ EG++Y F G+D + + P +EP L
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAF--GSDYYGCMGVDKVSGPEVLEPMQL 474
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
L N PV Q++ G +++ L VYS GCG G+LG S D P+ ++ +
Sbjct: 475 NFFLSN-PVEQVSCGDNHVVVLT---RNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPK 530
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------NEECESVP----- 302
L + V V G ++ Q G+V G + LG +E VP
Sbjct: 531 ALII--VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSF 588
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 589 TLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGG 645
Query: 363 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
L ++V+++S + T A T+ ++A+G G G+L +
Sbjct: 646 PLG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM 684
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 23/172 (13%)
Query: 264 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VA 317
V AG H AVV + + TW G +G LGHG++ PK V+ L KAIH V+
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG-KAIHQVS 432
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
GD T V+++G +Y+FG +G + ++ + VL P + ++ V Q
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPE------VLEPMQLNFF--LSNPVEQ 484
Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
+S ++ H LT + ++Y++G G+ G+LG+ +++ + P+RVD+
Sbjct: 485 VSCGDN-----HVVVLTRNKEVYSWGCGEYGRLGL---DSEEDYYTPQRVDV 528
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 143/318 (44%), Gaps = 27/318 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + LQG I Q +
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 432
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
G T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSC 487
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLL 215
G+ VL+R VY++ G RLG +E + P + + I VQ +LL
Sbjct: 488 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLL 547
Query: 216 A-----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP---RLIEQFQLLNLQPVVVAAG 267
LAC + + + G + H + + + L +Q ++ +A G
Sbjct: 548 TQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR--TIAPG 605
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVV 326
H A + + GR+ T+G + G LG GN + + + L + I V+ GD T
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAA 665
Query: 327 SEDGDVYSFGCGESASLG 344
++D ++++G G + L
Sbjct: 666 TDDNHIFAWGNGGNGRLA 683
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 138 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 184
++PQ ++ +K+ Q GN AV++ E +YT W N +LGH +
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVNMQGGTKLHGQLGHGDKASY 414
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+P VE L+ + Q++ G + + C +Y+ G G +G
Sbjct: 415 RQPKHVE------KLQGKAIRQVSCGDDFTV---CVTDEGQLYAFGSDYYGCMGVDKVAG 465
Query: 245 EKHPRLIEQFQL--LNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P ++E QL PV V+ G H V+ ++ V +WG G YG LG +EE
Sbjct: 466 ---PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 361
P+ V + + V G TF++++ G V + G E LG N G N A
Sbjct: 523 PQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 362 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
P T+ + +++ + HT A+ E G+L FG GQLG+
Sbjct: 583 P--YTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV 631
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 43/292 (14%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF------SWGNDARLGHHTEPNDVEPH 193
P+ VE L+ + Q + G+ FT ++ EG++Y F G D G P +EP
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG----PEVLEPM 472
Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L L N PV Q++ G +++ L VYS GCG G+LG S D P+ ++
Sbjct: 473 QLNFFLSN-PVEQVSCGDNHVVVLT---RNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------NEECESVP--- 302
+ L + V V G ++ Q G+V G + LG +E VP
Sbjct: 529 PKALII--VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTT 586
Query: 303 --KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 587 SFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLL 643
Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
L ++V+++S + T A T+ ++A+G G G+L +
Sbjct: 644 GGPLG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM 684
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 264 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V AG H AVV + + TW G +G LGHG++ PK V+ L V+
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
GD T V+++G +Y+FG +G + +A + VL P + ++ V Q+
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE------VLEPMQLNFF--LSNPVEQV 485
Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
S ++ H LT + ++Y++G G+ G+LG+ +++ + P++VD+
Sbjct: 486 SCGDN-----HVVVLTRNKEVYSWGCGEYGRLGL---DSEEDYYTPQKVDV 528
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 15/300 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + S VYS G NS GQLG + RP PI++L + + + G
Sbjct: 26 QAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEH 85
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ + LS
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+G V FSWG ++ LG ++ + + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 DGHV--FSWGRNSEGQLGLGKNSRSQAIPQK--VKSLEGIPLAQVAAGGTHSFALSLTGT 200
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G++ E+ + L NL + ++ G H AV+ ++G+V
Sbjct: 201 S---FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVF 257
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
T+G G L + P++++ + V I A+ +V + G V S G G S
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYT-TGQVVSLGRGPS 316
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 137/265 (51%), Gaps = 14/265 (5%)
Query: 85 RPRPIRS-LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
+PR +++ GI ++QAA+G ++L+ +VY+ G +S+G+ G + + P+ +
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQ--LGQRRDQSTERPEPI 68
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
++L ++ V + G + + +G+V+ + G++ +LG E ++ P + L I
Sbjct: 69 QALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGI 127
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQP 261
++Q++ G+ + LAL+ V+S G G+LG G + + P+ ++ + + L
Sbjct: 128 KIIQVSCGHYHSLALS---EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL-- 182
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVAT 318
VAAG H+ + G WG R G L GN+ E + P + AL ++ I+++
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 319 GDYTTFVVSEDGDVYSFGCGESASL 343
G T V++E+G V++FG S L
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 30/241 (12%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
FSW +R +P L I ++Q A+G + L L S VYS G
Sbjct: 3 FSWAAGSR----------KPRRLKAGTSGIELLQAASGEHHSLLLF---SNHRVYSCGDN 49
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ L++ +V+ G H+ V G+V WG G G LG
Sbjct: 50 SWGQLGQRRDQSTERPEPIQALNDLHVD--LVSCGKEHSVAVCHKGKVFAWGAGSEGQLG 107
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
G +E +P ++AL +K I V+ G Y + +SEDG V+S+G LG G
Sbjct: 108 IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-----G 162
Query: 352 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
+ +R + PQ V SL+ I L H+FAL+ +G + +G+ GQL
Sbjct: 163 KNSRSQAI--PQKVKSLEG-------IPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA 213
Query: 412 I 412
+
Sbjct: 214 L 214
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 28/268 (10%)
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
I ++QAA G + +L RVY+ SWG +LG + + P P+ L ++ V
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWG---QLGQRRDQSTERPEPI-QALNDLHVD 77
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVV 264
++ G + +A+ C V++ G G G+LG G + P I+ L ++ + V
Sbjct: 78 LVSCGKEHSVAV-CHKG--KVFAWGAGSEGQLGIGEFKEISFMPTKIKA--LAGIKIIQV 132
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTT 323
+ G +H+ + +DG V +WG G LG G N +++P+ V++L + VA G +
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHS 192
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTN 382
F +S G + +G S L + GN+ + P + +LK N V+ IS
Sbjct: 193 FALSLTGTSFGWGSNRSGQLALS------GNKVKEQIYKPHSIGALK--NLSVIYISCGY 244
Query: 383 SIYWNAHTFALTESGKLYAFGAGDKGQL 410
HT LTE G+++ FG GQL
Sbjct: 245 E-----HTAVLTEEGQVFTFGGNSSGQL 267
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A+G H+ ++ + RV + G +G LG ++ P+ +QALND+ V+ G +
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
V G V+++G G L G G P + +L + +++Q+S
Sbjct: 88 AVCHKGKVFAWGAGSEGQL-------GIGEFKEISFMPTKIKALAGI--KIIQVSCG--- 135
Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 427
+ H+ AL+E G ++++G +GQLG L N + P++V
Sbjct: 136 --HYHSLALSEDGHVFSWGRNSEGQLG--LGKNSRSQAIPQKV 174
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSN SGQL G+ E+ ++P I +L+ + +I +
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
G T ++++ GQV+ FG +S G+ + + + PQL+E +
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQ--RGPQLIEGI 284
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G P+ + L G+ + Q +AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++GK+ G+ G+ T+ P L+E L N V A G +A+L+
Sbjct: 202 HSMALSMSGNIYSWGKNECGQL--GLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLG--K 316
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G D+ P
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMP 339
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 25/269 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ I+ + ++I GA +++S G+ + EY K + +++
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF----------EYDNYSMKHLRFESILQE 137
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENI 202
K ++Q G++ + LS+ G + F+WG + +LG + P+ P ++ L +
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAGV 191
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+ QI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 192 PLAQISAGEAHSMALSM--SG-NIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVE 246
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
VA G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306
Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
T VS+ G V+SFG G+ LG+ D
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNGGTRD 335
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 257
L+ ++QI G + LAL+ G +++ G L G+LG G + P+++E L
Sbjct: 135 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LA 189
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ ++AG H+ + G + +WG G LG G+ E + P +++ L++ K VA
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA 249
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
G + ++++DG +++FG G+ LGHN+ N L P LV L V RV Q
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGYRVTQ 299
Query: 378 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 411
I+ W HT A +++ GK+++FG+G GQLG
Sbjct: 300 IACGR---W--HTLAYVSDLGKVFSFGSGKDGQLG 329
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 25/261 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H + ++S G + + + S L + LQ +IIQ G ++ +
Sbjct: 105 GAEHMLILSSDGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S G+++A+G++ G+ G + T+PQ+VE L + + Q + G + LS G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212
Query: 171 YTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
Y SWG + +LG HTE D +P L+ L+N V +A G + AL Q G+ ++
Sbjct: 213 Y--SWGKNECGQLGLGHTESKD-DP-SLIEGLDNQKVEFVACGGSH-SALLTQ-DGL-LF 265
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S +E P L+ +L+ + +A G WH A V G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVA--ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSG 323
Query: 287 RYGCLGHGNEECESVPKVVQA 307
+ G LG+G + +P V+
Sbjct: 324 KDGQLGNGGTRDQLMPLPVKV 344
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A++ G +YS+G N GQLG G TE + P I L ++ A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
+ L++ G ++ FG G+ G T+ P LV L V Q A G + T A +
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G D +LG+ + + P P+
Sbjct: 312 SDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 109
G HS +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAY 310
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+SD G+V++FG G+ G +L+ P V S
Sbjct: 311 VSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSS 346
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 320
+ + G +H+ + + G + WG +G LG G + + P++V+ L V ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 321 YTTFVVSEDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 377
+ +S G++YS+G CG+ LGH D P L+ L N++V
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQ-LGLGHTESKDD----------PSLIEGLD--NQKVEF 247
Query: 378 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
++ S H+ LT+ G L+ FGAG GQLG N+
Sbjct: 248 VACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 283
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 38/202 (18%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L C P +AV G G G ++ G+RT P+ I+ + N++ V GA H
Sbjct: 56 LCCSPGRLAVLERG-GAGVQVHQLLAGSGGART----PKCIKLGK--NMKIHSVDQGAEH 108
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
++ DG+ Y + ES+ L + K I + GDY + +S+ G
Sbjct: 109 MLILSSDGKPF-----EYDNYSMKHLRFESI------LQEKKIIQITCGDYHSLALSKGG 157
Query: 331 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 390
+++++G LG G + + TPQ+V L V + QIS AH+
Sbjct: 158 ELFAWGQNLHGQLG-------VGRKFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 203
Query: 391 FALTESGKLYAFGAGDKGQLGI 412
AL+ SG +Y++G + GQLG+
Sbjct: 204 MALSMSGNIYSWGKNECGQLGL 225
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 46 SQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
+Q G H++A V+ G V+SFGS GQLG+G T ++ P P++
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 171/390 (43%), Gaps = 71/390 (18%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPR--PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
VY FGS S +LG G E + +RPR PI S + ++ A G + +S G+VY +
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 120 G-----------KDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
G KD E V L +P VE +L ++ V + + TA ++
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 168 GRVYTFSWG----NDARLGH-HTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQP 221
G F+WG +D LG+ ++ EP T +P + Q+A G +++AL
Sbjct: 193 G--CCFTWGTFRCSDGVLGYSDSQKRTAEP-----TQMRLPEICQLATGTDHIIALT--- 242
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--------VVVAAGAWHAAV 273
+ VY+ G G +LG R++E+ +L L P + V AG++H+
Sbjct: 243 TTGKVYTWGNGQQFQLGR---------RMLERRRLQGLTPQPLALKNIISVGAGSYHSFA 293
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECE-----SVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+ GRV WG G E+ E + P +V AL + G++ T + E
Sbjct: 294 IDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLE 353
Query: 329 DGDVYSFGCGESASLG-------HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
DG V ++G + LG + D +GN + + TP ++ L V+Q+
Sbjct: 354 DGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYY-LSTPTIIPGLTN----VIQV--- 405
Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
+ H A+T GK+Y++G+ + ++G
Sbjct: 406 --VCGTHHNLAVTSDGKVYSWGSAENYEVG 433
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 144/342 (42%), Gaps = 34/342 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL--V 143
P+P+R + I L ++ VY FG S E G + +V P+L +
Sbjct: 48 PKPVRVPGSAKRINKIP-----ELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPI 102
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT--LEN 201
S + VV A+G +A LS +GRVYT+ +D LG T+ E + LE
Sbjct: 103 LSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEG 162
Query: 202 IPV-VQIAAGYCYLLALACQPS-GMAVYSVGCGL--------GGKLGHGSRTDEKHPRLI 251
P V+ A + + + C + A+ GC G LG+ + R
Sbjct: 163 TPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS----DSQKRTA 218
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV-QALND 310
E Q+ + +A G H + G+V TWG G+ LG E + + Q L
Sbjct: 219 EPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL 278
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 370
I V G Y +F + G VY++G + G + +G A + P LV +L+
Sbjct: 279 KNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEG---AVITKPTLVDALEG 335
Query: 371 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
N + S+T + HT AL E G++ A+G D+ QLGI
Sbjct: 336 YNVK----SITGGEH---HTLALLEDGRVLAWGRDDRHQLGI 370
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 145/361 (40%), Gaps = 59/361 (16%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEE-------------EWRPRPIR-SLQGIRIIQ 99
HS A++ G VY++G N LG T ++ E P + +L +R+ +
Sbjct: 119 HSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTK 178
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T I+D G + +G + G ++ T+ L I Q A G
Sbjct: 179 VICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI--CQLATGTD 236
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHT----EPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
L+ G+VYT+ G +LG + P PL L+NI + + AG +
Sbjct: 237 HIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL--ALKNI--ISVGAGSYHSF 292
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-----HPRLIEQFQLLNLQPVVVAAGAWH 270
A+ + VY+ G + + G +E+ P L++ + N++ + G H
Sbjct: 293 AIDNK---GRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSIT--GGEHH 347
Query: 271 AAVVGQDGRVCTWGWGRYGCLG--------------HGNEECESVPKVVQALNDVKAIHV 316
+ +DGRV WG LG GN S P ++ L +V I V
Sbjct: 348 TLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNV--IQV 405
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS--LKQVNER 374
G + V+ DG VYS+G E+ + GQG+ +V P LV S +K+V R
Sbjct: 406 VCGTHHNLAVTSDGKVYSWGSAENYEV-------GQGDNDEDVAVPTLVRSKAIKEVAIR 458
Query: 375 V 375
V
Sbjct: 459 V 459
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 119/288 (41%), Gaps = 74/288 (25%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--------RII 98
Q G H IA+T+ G VY++G+ QLG E R LQG+ II
Sbjct: 230 QLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLER-------RRLQGLTPQPLALKNII 282
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK---LVTSPQLVESLKNIFVVQAA 155
AG+ + I + G+VYA+G + + V+ + ++T P LV++L+ V
Sbjct: 283 SVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSIT 342
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-IP--VVQIAAGYC 212
G T L +GRV +WG D R H LG +N +P VV+ G
Sbjct: 343 GGEHHTLALLEDGRV--LAWGRDDR--HQ-----------LGIPDNALPETVVKDEKGNN 387
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
Y L+ P +I L N+ + V G H
Sbjct: 388 YYLST------------------------------PTIIP--GLTNV--IQVVCGTHHNL 413
Query: 273 VVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVV--QALNDVKAIHVA 317
V DG+V +WG +G G N+E +VP +V +A+ +V AI VA
Sbjct: 414 AVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEV-AIRVA 460
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 42/269 (15%)
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTL---ENIPVVQIAAGYCYLLALACQPSGMAV 226
VY F G+ LG E DV P L + + + VV +A G + AL+ V
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHD---GRV 129
Query: 227 YSVGCGLGGKLG---------HGSRTD----EKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
Y+ G LG +G + D E P +E L +L+ V A
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG-ALSHLRVTKVICSDNLTAA 188
Query: 274 VGQDGRVCTWGWGRYGC----LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
+ +G C + WG + C LG+ + + + L ++ +ATG ++
Sbjct: 189 ITDNG--CCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI--CQLATGTDHIIALTTT 244
Query: 330 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 389
G VY++G G+ LG + R LTPQ + +LK + IS+ Y H
Sbjct: 245 GKVYTWGNGQQFQLGRRMLE----RRRLQGLTPQPL-ALKNI------ISVGAGSY---H 290
Query: 390 TFALTESGKLYAFGAGDKGQLGIELVNNQ 418
+FA+ G++YA+G Q GIE+ + +
Sbjct: 291 SFAIDNKGRVYAWGLNITRQCGIEVEDEE 319
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ VY G G +LG G + PRL + V +A G H+A + DGRV
Sbjct: 71 LNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVY 130
Query: 282 TWGWGRYGCLGH-------------GNEECESVP-KVVQALNDVKAIHVATGDYTTFVVS 327
TWG LG N+ E P KV AL+ ++ V D T ++
Sbjct: 131 TWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAIT 190
Query: 328 EDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 384
++G +++G C + LG+ +D Q R A +L + Q++
Sbjct: 191 DNGCCFTWGTFRCSDGV-LGY---SDSQ-KRTAEPTQMRL--------PEICQLATGTD- 236
Query: 385 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 422
H ALT +GK+Y +G G + QLG ++ + +G
Sbjct: 237 ----HIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q + G H++AVTS G VYS+GS + ++G G +E+ P +RS + AGAG
Sbjct: 404 QVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGAG 463
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 168/391 (42%), Gaps = 72/391 (18%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H T G+V + G GQLG G E R +P ++QA AG T+ +S +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVVQAEAGGMHTVCLSKS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTDDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
F WG N+ +G EP P+ L ++PVV++A+G +L+ L +Y
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-DVPVVKVASGNDHLVMLTADGD---LY 194
Query: 228 SVGCGLGGKLGH-------------------------GSRTDEKHPRLIEQFQLLNLQPV 262
++GCG G+LG SR H R + F
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF-------- 246
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGD 320
GA+ + +G V +G Y LG G E C + N K+ + + G
Sbjct: 247 ---CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQ 303
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
+ T + +G YS G E LG G+G ++ P L++ L V+ S+
Sbjct: 304 HHTVCMDSEGKAYSLGRAEYGRLGL-----GEGAEEKSI--PTLISRLPAVSSVACGASV 356
Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
+A+T+ G+++A+G G QLG
Sbjct: 357 G---------YAVTKDGRVFAWGMGTNYQLG 378
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 30/318 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA AG H++ ++ G VYSFG N G LG T+ E P + +++Q +AG
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE----------------PNDVEPHPLLGTLENIPVVQIA 208
+ +G +YT G +LG E P V +L + + V+
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV----MLKSRGSRGHVRFQ 243
Query: 209 AGYC-YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
+C A G VY G +LG P+ + F+ V + G
Sbjct: 244 DAFCGAYFTFAISHEGH-VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG 302
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H + +G+ + G YG LG G E +S+P ++ L V + VA G + V
Sbjct: 303 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSS--VACGASVGYAV 360
Query: 327 SEDGDVYSFGCGESASLG 344
++DG V+++G G + LG
Sbjct: 361 TKDGRVFAWGMGTNYQLG 378
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 125/318 (39%), Gaps = 37/318 (11%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 88
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y+F ++ LG T E P L+ VVQ++AG + AL V+ G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-KVVQVSAGDSHTAALT---DDGRVFLWG 144
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G K + Q Q L++ V VA+G H ++ DG + T G G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 203
Query: 291 LGH---------GNEECES--VPKVVQALNDVKAIHVATGD-----YTTFVVSEDGDVYS 334
LG G + E VPK V + HV D Y TF +S +G VY
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYG 263
Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
FG LG + PQ +TS K + V S HT +
Sbjct: 264 FGLSNYHQLGTPGT--------ESCFIPQNLTSFKNSTKSWVGFS-----GGQHHTVCMD 310
Query: 395 ESGKLYAFGAGDKGQLGI 412
GK Y+ G + G+LG+
Sbjct: 311 SEGKAYSLGRAEYGRLGL 328
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 26/315 (8%)
Query: 34 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSL 92
++ G+ + + Q AG H+ A+T G V+ +GS G E + P++
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLV 143
+ +++ A+G ++++ G +Y G G+ G QG + + P+ V
Sbjct: 170 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 144 E-----SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
S ++ A G +FT +S EG VY F N +LG + P L
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSF 289
Query: 199 LENIPV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 256
+ V + G + + C S YS+G G+LG G +EK P LI +
Sbjct: 290 KNSTKSWVGFSGGQHHTV---CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA 346
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVKAI 314
++ VA GA V +DGRV WG G LG G +E V + + L + +
Sbjct: 347 VS----SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVL 402
Query: 315 HVATGDYTTFVVSED 329
V++G T ++ +D
Sbjct: 403 SVSSGGQHTVLLVKD 417
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + + G V T G G G LG G E P +V DV + G T +S+
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSK 84
Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
G VYSFGC + +LG + +G ++V ++ E+VVQ+S +S
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS----- 129
Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 431
HT ALT+ G+++ +G+ I L+ + P +V +D+
Sbjct: 130 HTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDV 172
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 16/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT +Y FGSN+ GQLG G+ +P I++L+ ++ AA G T++
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G VYA G ++ G+ G + T Q+V + Q + G +A L+ +G++
Sbjct: 103 TDTGGVYAAGGNNEGQLGLGDTDDR-DTFHQIVFFTPADTIKQLSAGANTSAALTEDGKL 161
Query: 171 YTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
F WG+++ ++G + N PH + +G P+ I+ GY Y A +Y
Sbjct: 162 --FMWGDNSEGQIGLEDKSNVCIPHEVTVGK----PISWISCGY-YHSAFVTMDG--ELY 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G GKLG + H R ++ + + + VA G H V+ + V +G G+
Sbjct: 213 TFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTE-KVVYAFGLGQ 270
Query: 288 YGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G LG G E S PK+++ + D K H++ G+ T +++E G +Y+FG G LG
Sbjct: 271 FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGR 106
A G H++ T G VY+ G N+ GQLG G T++ I I Q +AGA
Sbjct: 92 AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANT 151
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ G+++ +G +S E + G++ V P V K I + + G + +A ++
Sbjct: 152 SAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTM 207
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G +YTF + +LG E N P +LG E V+Q+A G + + L +
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEK---- 261
Query: 225 AVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LG G+ E P++IE+ + + + ++ G H A++ + G + T+
Sbjct: 262 VVYAFGLGQFGQLGLGTFLFETSEPKIIERIK--DQKICHISCGENHTALMTELGLLYTF 319
Query: 284 GWGRYGCLGHGNE 296
G GR+G LG G E
Sbjct: 320 GDGRHGKLGLGME 332
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 138/313 (44%), Gaps = 52/313 (16%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTAVLS 165
L+ D G V+ FGK F E + S KN + + G+ TA+++
Sbjct: 7 LVPDTGAVFTFGKTKFAEN---------------IPSKFWFKNDIPICLSCGDEHTAIVT 51
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++Y F N +LG ++ ++P + L+ V A G + L ++ G
Sbjct: 52 GNNKLYMFGSNNWGQLGLGSKAAIIKPT-CIKALKPEKVKLAACGRNHTL-VSTDTGG-- 107
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF-QLLNLQPV----VVAAGAWHAAVVGQDGRV 280
VY+ G G+LG G D + F Q++ P ++AGA +A + +DG++
Sbjct: 108 VYAAGGNNEGQLGLGDTDDR------DTFHQIVFFTPADTIKQLSAGANTSAALTEDGKL 161
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
WG G +G ++ +P V + I + G Y + V+ DG++Y+FG E+
Sbjct: 162 FMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTMDGELYTFGEPEN 219
Query: 341 ASLG-HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
LG N + N +PQ V + ERV+Q++ HT LTE +
Sbjct: 220 GKLGLPNELL-------MNHRSPQRVLGIP---ERVIQVAC-----GGGHTVVLTEK-VV 263
Query: 400 YAFGAGDKGQLGI 412
YAFG G GQLG+
Sbjct: 264 YAFGLGQFGQLGL 276
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 155/362 (42%), Gaps = 39/362 (10%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
V G V++FG + + W I I + G T +++ ++Y
Sbjct: 8 VPDTGAVFTFGKT---KFAENIPSKFWFKNDIP-------ICLSCGDEHTAIVTGNNKLY 57
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
FG +++G+ G+ + P +++LK V AA G T V + G VY N
Sbjct: 58 MFGSNNWGQ--LGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNN 115
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+ +LG + H ++ + Q++AG AL ++ G G++
Sbjct: 116 EGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT---EDGKLFMWGDNSEGQI 172
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G +++ P ++ +P+ ++ G +H+A V DG + T+G G LG NE
Sbjct: 173 GLEDKSNVCIPH-----EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE 227
Query: 297 EC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
P+ V + + + I VA G T V++E VY+FG G+ LG G
Sbjct: 228 LLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG-------LGT 278
Query: 355 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 414
P+++ +K ++++ IS + HT +TE G LY FG G G+LG+ +
Sbjct: 279 FLFETSEPKIIERIK--DQKICHISCGEN-----HTALMTELGLLYTFGDGRHGKLGLGM 331
Query: 415 VN 416
N
Sbjct: 332 EN 333
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F N P+ ++ G H A+V + ++ +G +G LG G++ P ++AL K
Sbjct: 29 KFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK 88
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
A G T V ++ G VY+ G LG D TP ++KQ++
Sbjct: 89 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP--ADTIKQLS 146
Query: 373 ERVVQISLTNSIYWNAHTF-ALTESGKLYAFGAGDKGQLGIELVNN 417
A+T ALTE GKL+ +G +GQ+G+E +N
Sbjct: 147 -------------AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSN 179
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 58/226 (25%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP------RPI----------- 89
Q AG S A+T G ++ +G NS GQ+G P +PI
Sbjct: 144 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSA 203
Query: 90 -----------------------------RSLQGI-----RIIQAAAGAGRTMLISDAGQ 115
RS Q + R+IQ A G G T+++++
Sbjct: 204 FVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-V 262
Query: 116 VYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
VYAFG FG + G+ GT L + P+++E +K+ + + G TA+++ G +YTF
Sbjct: 263 VYAFGLGQFG--QLGL-GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTF 319
Query: 174 SWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQIAAGYCYLLALA 218
G +LG E + P L V IA G C++L A
Sbjct: 320 GDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 22/301 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS VT +Y FGSN+ GQLG G+ +P +++L+ ++ AA G T++
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G VYA G ++ E + G+ T+ + ++ + + Q + G+ +A L+ +GR
Sbjct: 103 TEGGNVYATGGNN--EGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGR 160
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+ F WG+++ ++G N P + +G PV I+ GY Y A + V
Sbjct: 161 L--FMWGDNSEGQIGLKNVSNVCVPQQVTIGK----PVSWISCGY-YHSAFVTTDGELYV 213
Query: 227 YSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+ G GKLG ++ + + P+L+ + +Q VA G H V+ ++ V T+G
Sbjct: 214 F--GEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFG 267
Query: 285 WGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G++G LG G E S PKV++ + D +++ G+ T ++++ G +Y+FG G L
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKL 327
Query: 344 G 344
G
Sbjct: 328 G 328
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 28/259 (10%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGR 106
A G H++ T G VY+ G N+ GQLG G TEE I +I Q +AG+
Sbjct: 92 AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNT 151
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ G+++ +G +S E + G++ V PQ V K + + + G + +A ++
Sbjct: 152 SAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVTT 207
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT------LENIP--VVQIAAGYCYLLALA 218
+G +Y F + +LG P+ LLG + IP V+Q+A G + + L
Sbjct: 208 DGELYVFGEPENGKLGL--------PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL- 258
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ AVY+ G G G+LG G+ E P++IE + + ++ G H A++
Sbjct: 259 ---TENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTIS--YISCGENHTALITDI 313
Query: 278 GRVCTWGWGRYGCLGHGNE 296
G + T+G GR+G LG G E
Sbjct: 314 GLMYTFGDGRHGKLGLGLE 332
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 147/356 (41%), Gaps = 77/356 (21%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
L+ D+G V+ FGK F E G K KN V + G+ +AV++
Sbjct: 7 LMPDSGAVFTFGKSKFAENNPG----KFW--------FKNDVPVHLSCGDEHSAVVTGNN 54
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++Y F N +LG ++ +P + L+ V A G + L G VY+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKP-TCVKALKPEKVKLAACGRNHTLVST---EGGNVYA 110
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G T+E++ + F + ++AG+ +A + +DGR+ WG
Sbjct: 111 TGGNNEGQLGLGD-TEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSE 169
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG-HNA 347
G +G N VP+ V V I + G Y + V+ DG++Y FG E+ LG N
Sbjct: 170 GQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ 227
Query: 348 IADGQGNRHANVLTPQLVTSLKQVNERVVQIS--------LT-NSIYW------------ 386
+ N TPQLV+ ++ E+V+Q++ LT N++Y
Sbjct: 228 LL-------GNHRTPQLVS---EIPEKVIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277
Query: 387 --------------------------NAHTFALTESGKLYAFGAGDKGQLGIELVN 416
HT +T+ G +Y FG G G+LG+ L N
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F N PV ++ G H+AVV + ++ +G +G LG G++ S P V+AL K
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK 88
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 372
A G T V +E G+VY+ G LG + D + +V++ TS
Sbjct: 89 VKLAACGRNHTLVSTEGGNVYATGGNNEGQLG---LGDTEERNTFHVIS--FFTS----E 139
Query: 373 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 417
++ Q+S ++ + ALTE G+L+ +G +GQ+G++ V+N
Sbjct: 140 HKIKQLSAGSNT-----SAALTEDGRLFMWGDNSEGQIGLKNVSN 179
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 95/235 (40%), Gaps = 23/235 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S A+T G ++ +G NS GQ+G P+ + + + I + G
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYH 201
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G++Y FG+ G+ Q +PQLV + V+Q A G T VL+
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLT- 259
Query: 167 EGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
E VYTF G +LG +EP +ENI I+ C A
Sbjct: 260 ENAVYTFGLGQFGQLGLGTFLFETSEPK---------VIENIRDQTISYISCGENHTALI 310
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAV 273
+Y+ G G GKLG G H P L F L +VA G H V
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNF--LRFIVKLVACGGCHMVV 363
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 143/334 (42%), Gaps = 39/334 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
Q AG H VT + +Y++ GS GQLGHG +P+ + LQG + + +
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVS 414
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G+ T+ I+D GQ+Y+FG D +G V P LV+ N V Q + G+
Sbjct: 415 CGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHI 474
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+R VY++ G RLG +E + P V++ G C ++ + C
Sbjct: 475 MALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQK----------VEVQRGLC-IVNVCCGS 523
Query: 222 SGMAVYS-----VGCGLG--GKLGHGSRTD--------EKHP-----RLIEQFQLLNLQP 261
G + + + CGL KLG T ++ P L +Q ++
Sbjct: 524 DGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRS 583
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGD 320
++ G H A + + GR+ T+G + G LG G+ + + + L + I V+ GD
Sbjct: 584 --ISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGD 641
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 354
T + D ++++G G + L QG+
Sbjct: 642 EFTTAATADNHIFAWGNGGNGRLAMTPNERPQGS 675
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 264 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V AG H AVV + + TW G +G LGHG+ PK V+ L V+
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
G T ++++G +YSFG LG N A + VL P LV +NE V Q+
Sbjct: 416 GSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSE------VLEPLLVDFF--LNEPVDQV 467
Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 429
S +S H ALT S +Y++G G+ G+LG+ +++ + +P++V++
Sbjct: 468 SCGDS-----HIMALTRSKSVYSWGCGEYGRLGL---DSEDDVYSPQKVEV 510
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 38/294 (12%)
Query: 138 TSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 184
T+PQ ++ K + Q G+ AV++ E +YT W N +LGH +
Sbjct: 339 TTPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYT--WVNMQGGSKLHGQLGHGDRASY 396
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG--HGSR 242
+P VE L+ V +++ G + + C +YS G G LG +
Sbjct: 397 RQPKHVE------KLQGKSVQKVSCGSDFTV---CITDEGQLYSFGSDYYGCLGVNQSAG 447
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P L++ F LN V+ G H + + V +WG G YG LG +E+ P
Sbjct: 448 SEVLEPLLVDFF--LNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSP 505
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 362
+ V+ + ++V G +F+++ G V + G E LG N G N A P
Sbjct: 506 QKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVP 565
Query: 363 QLVTSL---KQVN-ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 412
TSL KQ++ ++ IS + HT A+ E G+L FG+ GQLG+
Sbjct: 566 -YTTSLTLAKQLSFYKIRSISPGRT-----HTAAIDERGRLLTFGSNKCGQLGV 613
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 20/255 (7%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGR 106
A G H++ T G VY+ G N+ GQLG G TEE I R I Q +AG+
Sbjct: 92 AACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNT 151
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ G+++ +G +S E + G++ V PQ V K I + + G + +A ++
Sbjct: 152 SAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVTT 207
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPS 222
EG++YTF +LG + N P P+ G IP VVQ+A G + + L +
Sbjct: 208 EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG----IPGKVVQVACGGGHTVVLTEK-- 261
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
AVY+ G G G+LG G+ E P+ IE + + +A G H A++ G +
Sbjct: 262 --AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKIS--FIACGENHTALITDMGLMY 317
Query: 282 TWGWGRYGCLGHGNE 296
T+G GR+G LG G E
Sbjct: 318 TFGDGRHGKLGLGLE 332
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 26/303 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT +Y FGSN+ GQLG G+ +P +++L+ ++ AA G T++
Sbjct: 43 GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-----GNFFTAVLS 165
++ G+VYA G ++ E + G+ T+ ++ L+ + F Q I G+ +A L+
Sbjct: 103 TEGGKVYAAGGNN--EGQLGLGDTEERSTFHLI----SFFTSQRKIKQLSAGSNTSAALT 156
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPS 222
+G + F WG+++ ++G N P + +G P+ I+ GY + + +
Sbjct: 157 EDGEL--FMWGDNSEGQIGLENVTNVCVPQQVTVGK----PISWISCGYYHSAFVTTE-- 208
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
+Y+ G GKLG ++ H R+ + + + V VA G H V+ + V T
Sbjct: 209 -GQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTEKA-VYT 265
Query: 283 WGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
+G G++G LG G E SVPK ++ + D K +A G+ T ++++ G +Y+FG G
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHG 325
Query: 342 SLG 344
LG
Sbjct: 326 KLG 328
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 29/320 (9%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T +++ ++Y FG +++G+ G + T V+ P V++LK V AA G
Sbjct: 41 SCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST--VSKPTCVKALKPEKVKFAACGRNH 98
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T V + G+VY N+ +LG H + + Q++AG AL
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT-- 156
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
++ G G++G + T+ P+ Q+ +P+ ++ G +H+A V +G+
Sbjct: 157 -EDGELFMWGDNSEGQIGLENVTNVCVPQ-----QVTVGKPISWISCGYYHSAFVTTEGQ 210
Query: 280 VCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
+ T+G G LG N+ +P+ V + K + VA G T V++E VY+FG
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA-VYTFGL 268
Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
G+ LG + T TS+ + E + ++ HT +T+ G
Sbjct: 269 GQFGQLG--------------LGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 398 KLYAFGAGDKGQLGIELVNN 417
+Y FG G G+LG+ L N+
Sbjct: 315 LMYTFGDGRHGKLGLGLENS 334
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 15/245 (6%)
Query: 33 FLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL 92
F L +R+ Q AG S A+T G ++ +G NS GQ+G P+ +
Sbjct: 130 FHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIF 150
+ I I + G + ++ GQ+Y FG+ G + G+ LV PQ V +
Sbjct: 190 KPISWI--SCGYYHSAFVTTEGQLYTFGEPECG--KLGLPNQLLVNHRMPQPVPGIPGK- 244
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
VVQ A G T VL+ E VYTF G +LG T + + +++ + IA G
Sbjct: 245 VVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACG 303
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
+ + G+ +Y+ G G GKLG G + T++ P L F +Q +V+ G
Sbjct: 304 ENHTALITDM--GL-MYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQ--LVSCGG 358
Query: 269 WHAAV 273
H V
Sbjct: 359 CHTLV 363
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G GH++ +T K VY+FG GQLG GT E P+ I ++ +I A G
Sbjct: 247 QVACGGGHTVVLTEK-AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGEN 305
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T LI+D G +Y FG G+ G++ + P L + V + G T V +
Sbjct: 306 HTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V T+G ++ E++P NDV ++ GD T VV+ + +Y FG
Sbjct: 12 GAVFTFGKTQFA---------ENIPSKFWFRNDVPTF-LSCGDEHTAVVTGNNKLYMFGS 61
Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
LG + + V P V +LK + HT TE G
Sbjct: 62 NNWGQLGLGS--------KSTVSKPTCVKALKPEKVKFAACGRN-------HTLVSTEGG 106
Query: 398 KLYAFGAGDKGQLGI 412
K+YA G ++GQLG+
Sbjct: 107 KVYAAGGNNEGQLGL 121
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 177/391 (45%), Gaps = 72/391 (18%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
H T G+V + G GQLG G + E +P + LQ ++QA AG T+ ++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLNQ 84
Query: 113 AGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTEDGRV 140
Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
F WG N+ +G EP P+ L ++PVV++A+G +L+ L +
Sbjct: 141 --FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-DMPVVKVASGNDHLVMLTTDGD---L 193
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQF----------QLLNLQPVVVAA---------- 266
Y++GCG G+LG R+ E F +LL + V++ +
Sbjct: 194 YTLGCGEQGQLG----------RVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQ 243
Query: 267 ----GAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGD 320
GA+ + ++G V +G Y LG G C + N K+ + + G
Sbjct: 244 DAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQ 303
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
+ T + +G YS G E LG G+G ++ P L++ L V+ S+
Sbjct: 304 HHTICMDSEGKAYSLGRAEYGRLGL-----GEGAEEKSI--PTLISRLPVVSSVACGASV 356
Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
+A+++ G+++A+G G QLG
Sbjct: 357 G---------YAVSKDGRVFAWGMGTNYQLG 378
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 139/324 (42%), Gaps = 30/324 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA AG H++ + G VYSFG N G LG T+ E P + +++Q +AG
Sbjct: 71 QAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE----------------PNDVEPHPLLGTLENIPVVQIA 208
+ +G +YT G +LG E P V LL + + V+
Sbjct: 188 TTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV----LLKSRGSRGRVRFQ 243
Query: 209 AGYC-YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
+C L A G VY G +LG P+ + F+ V + G
Sbjct: 244 DAFCGAYLTFAISREGH-VYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGG 302
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H + +G+ + G YG LG G E +S+P ++ L V + VA G + V
Sbjct: 303 QHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS--VACGASVGYAV 360
Query: 327 SEDGDVYSFGCGESASLGHNAIAD 350
S+DG V+++G G + LG D
Sbjct: 361 SKDGRVFAWGMGTNYQLGTGQDED 384
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 126/318 (39%), Gaps = 37/318 (11%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ G V G+ G+ G + P LV L++ VVQA G T L++ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQV 88
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y+F ++ LG T E P L+ VVQ++AG + AL V+ G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-KVVQVSAGDSHTAALT---EDGRVFLWG 144
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G K + Q Q L++ V VA+G H ++ DG + T G G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQ 203
Query: 291 LGHGNE-----------ECESVPKVVQ-----ALNDVKAIHVATGDYTTFVVSEDGDVYS 334
LG E E VPK V + V+ G Y TF +S +G VY
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYG 263
Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
FG LG A+ PQ +TS K + V S HT +
Sbjct: 264 FGLSNYHQLGTPGT--------ASCFIPQNLTSFKNSTKSWVGFS-----GGQHHTICMD 310
Query: 395 ESGKLYAFGAGDKGQLGI 412
GK Y+ G + G+LG+
Sbjct: 311 SEGKAYSLGRAEYGRLGL 328
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 30/317 (9%)
Query: 34 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSL 92
++ G+ + + Q AG H+ A+T G V+ +GS G E + P++
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLV 143
+ +++ A+G ++++ G +Y G G+ G QG + + P+ V
Sbjct: 170 LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 144 -----ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
S + A G + T +SREG VY F N +LG + P L
Sbjct: 230 LLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSF 289
Query: 199 LENIPV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 256
+ V + G + + C S YS+G G+LG G +EK P LI +
Sbjct: 290 KNSTKSWVGFSGGQHHTI---CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 344
Query: 257 LNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVK 312
PVV VA GA V +DGRV WG G LG G +E P + + L +
Sbjct: 345 ----PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV 400
Query: 313 AIHVATGDYTTFVVSED 329
+ V++G T ++ +D
Sbjct: 401 VLTVSSGGQHTVLLVKD 417
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + + G V T G G G LG G E P +V L DV + G T +++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLNQ 84
Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 388
G VYSFGC + +LG + +G ++V ++ E+VVQ+S +S
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS----- 129
Query: 389 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 431
HT ALTE G+++ +G+ I L+ + P +V +D+
Sbjct: 130 HTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDM 172
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 176/391 (45%), Gaps = 72/391 (18%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
H T G+V + G GQLG G + E +P + LQ ++QA AG T+ +S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQ 84
Query: 113 AGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTEDGRV 140
Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
F WG N+ +G EP P+ L + PVV++A+G +L+ L +
Sbjct: 141 --FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-DAPVVKVASGNDHLVMLTNDGD---L 193
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQF----------QLLNLQPVVVAA---------- 266
Y++GCG G+LG R+ E F +LL + V++ +
Sbjct: 194 YTLGCGEQGQLG----------RVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQ 243
Query: 267 ----GAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGD 320
GA+ + ++G V +G Y LG G C + N K+ + + G
Sbjct: 244 DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQ 303
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 380
+ T + +G YS G E LG G+G ++ P L++ L V+ S+
Sbjct: 304 HHTVCMDSEGKAYSLGRAEYGRLGL-----GEGAEEKSI--PTLISRLPVVSSVACGASV 356
Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
+A+++ G+++A+G G QLG
Sbjct: 357 G---------YAVSKDGRVFAWGMGTNYQLG 378
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 139/322 (43%), Gaps = 26/322 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA AG H++ ++ G VYSFG N G LG T+ E P + +++Q +AG
Sbjct: 71 QAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ + VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLL----GTLENIPVVQIAA 209
+ +G +YT G +LG E + P +L GT +
Sbjct: 188 TNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFC 247
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + A++ + VY G +LG P+ + F+ V + G
Sbjct: 248 GAYFTFAISREGH---VYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQH 304
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +G+ + G YG LG G E +S+P ++ L V + VA G + VS+
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS--VACGASVGYAVSK 362
Query: 329 DGDVYSFGCGESASLGHNAIAD 350
DG V+++G G + LG D
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDED 384
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ G V G+ G+ G + P LV L++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y+F ++ LG T E P L+ VVQ++AG + AL V+ G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-KVVQVSAGDSHTAALT---EDGRVFLWG 144
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
G K + Q QL PVV VA+G H ++ DG + T G G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQL--DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQG 202
Query: 290 CLGHGNEECES-----------VPKVVQ-----ALNDVKAIHVATGDYTTFVVSEDGDVY 333
LG E + VP+ V V+ G Y TF +S +G VY
Sbjct: 203 QLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY 262
Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 393
FG LG G G + PQ +TS K + V S HT +
Sbjct: 263 GFGLSNYHQLG----TPGTG----SCFIPQNLTSFKNSTKSWVGFS-----GGQHHTVCM 309
Query: 394 TESGKLYAFGAGDKGQLGI 412
GK Y+ G + G+LG+
Sbjct: 310 DSEGKAYSLGRAEYGRLGL 328
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 30/317 (9%)
Query: 34 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSL 92
++ G+ + + Q AG H+ A+T G V+ +GS G E + P++
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLV 143
+++ A+G +++++ G +Y G G+ G QG + P+ V
Sbjct: 170 LDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCV 229
Query: 144 -----ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
+ + A G +FT +SREG VY F N +LG + P L
Sbjct: 230 LLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSF 289
Query: 199 LENIPV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 256
+ V + G + + C S YS+G G+LG G +EK P LI +
Sbjct: 290 KNSTKSWVGFSGGQHHTV---CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL-- 344
Query: 257 LNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVK 312
PVV VA GA V +DGRV WG G LG G +E P + + L +
Sbjct: 345 ----PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV 400
Query: 313 AIHVATGDYTTFVVSED 329
+ V++G T ++ +D
Sbjct: 401 VLTVSSGGQHTVLLVKD 417
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V T G G G LG G E P +V L DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQSGQVYS 90
Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 395 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 430
E G+++ +G+ I L+ + P +V +D
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLD 171
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 162/379 (42%), Gaps = 42/379 (11%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+ P H T G V + G GQLG G E R +P I+QAAAG T+
Sbjct: 31 VTHPSHG---TVGGQVLTLGQGDVGQLGLGEDIME-RKKPALVTLTEDIVQAAAGGMHTV 86
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ +G +Y FG + G P VE + VVQ + G+ TA L+ +G
Sbjct: 87 CLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEK--VVQVSAGDSHTAALTEDG 144
Query: 169 RVYTF-SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
RV+ F S+ ++ + EP P+ + N PV++IA+G +L+ L +Y
Sbjct: 145 RVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI-NTPVIKIASGNDHLVLLTVDGD---LY 200
Query: 228 SVGCGLGGKLGHGSR--TDEKHPRLIEQF---QLLNLQPV--------VVAAGAWHAAVV 274
+ GCG G+LG T+ + +E+ Q ++L+ V GA+ V
Sbjct: 201 TSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAV 260
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKA-IHVATGDYTTFVVSEDGDV 332
Q+G V +G Y LG N + P+ + + N K+ I + G + T V +G
Sbjct: 261 SQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKA 320
Query: 333 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 392
YS G E LG A+ Q P + L ++N S+ ++A
Sbjct: 321 YSLGRAEYGRLGLGENAEEQSE-------PTPIPDLPKINSVASGASV---------SYA 364
Query: 393 LTESGKLYAFGAGDKGQLG 411
++ G ++A+G G QLG
Sbjct: 365 VSTDGCVFAWGMGTNLQLG 383
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 152/352 (43%), Gaps = 37/352 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA AG H++ + + G +Y+FG N G LG T+EE +P + +++Q +AG
Sbjct: 77 QAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSH 136
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ FG SF + GV G + S V+ N V++ A GN +L
Sbjct: 137 TAALTEDGRVFVFG--SFRDNN-GVIGLLEPMKKSMVPVQVQINTPVIKIASGNDHLVLL 193
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ----------------IA 208
+ +G +YT G +LG P LE + V Q +
Sbjct: 194 TVDGDLYTSGCGEQGQLGR--VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVF 251
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G + A++ + VY G +LG + P+ + F+ + + G
Sbjct: 252 CGAYFTFAVSQEGH---VYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQ 308
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
H V +G+ + G YG LG G N E +S P + L + + VA+G ++ VS
Sbjct: 309 HHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINS--VASGASVSYAVS 366
Query: 328 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 379
DG V+++G G + LG D V +P+ +T + V+ +S
Sbjct: 367 TDGCVFAWGMGTNLQLGTGEEED--------VWSPEQMTGKHLEDREVLSVS 410
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 127/327 (38%), Gaps = 40/327 (12%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
GQV G+ G+ G + P LV ++I VQAA G T L G +YTF
Sbjct: 41 GQVLTLGQGDVGQLGLG-EDIMERKKPALVTLTEDI--VQAAAGGMHTVCLGASGSIYTF 97
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
++ LG T E P G +E VVQ++AG + AL V+ G
Sbjct: 98 GCNDEGALGRDTSEEGSEMQP--GKVELAEKVVQVSAGDSHTAALT---EDGRVFVFGSF 152
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G K + Q Q +N + +A+G H ++ DG + T G G G LG
Sbjct: 153 RDNNGVIGLLEPMKKSMVPVQVQ-INTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG 211
Query: 293 HGNEECES-----------VPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
E + VP+ + + V V G Y TF VS++G VY FG
Sbjct: 212 RVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGL 271
Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
LG N A PQ +TS K + + S HT + G
Sbjct: 272 SNYHQLGTK-------NTQA-CYAPQNLTSFKNSTKSWIGFS-----GGQHHTVCVDSEG 318
Query: 398 KLYAFGAGDKGQLGIELVNNQTERGNP 424
K Y+ G + G+LG L N E+ P
Sbjct: 319 KAYSLGRAEYGRLG--LGENAEEQSEP 343
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 27/299 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSLQGIRIIQAAAGAG 105
Q AG H+ A+T G V+ FGS G E + P++ +I+ A+G
Sbjct: 129 QVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQINTPVIKIASGND 188
Query: 106 RTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLVESLK-----NIFV 151
+L++ G +Y G G+ G +G + + PQ + LK +
Sbjct: 189 HLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH-LKAKGSGRVHF 247
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV-VQIAAG 210
G +FT +S+EG VY F N +LG P L + + + G
Sbjct: 248 QDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGG 307
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAW 269
+ + C S YS+G G+LG G +E+ P I +N VA+GA
Sbjct: 308 QHHTV---CVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKIN----SVASGAS 360
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVV 326
+ V DG V WG G LG G EE P+ + + L D + + V++G T ++
Sbjct: 361 VSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLL 419
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++ V S+G YS G G+LG G EE+ P PI L +I A+GA +
Sbjct: 307 GQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLP--KINSVASGASVSYA 364
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV--ESLKNIFVVQAAIGNFFTAVLSRE 167
+S G V+A+G + + G + V SP+ + + L++ V+ + G T +L R+
Sbjct: 365 VSTDGCVFAWGMGT--NLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVRK 422
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats.
Identities = 91/384 (23%), Positives = 168/384 (43%), Gaps = 79/384 (20%)
Query: 45 NSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---GIRI 97
N Q I G HS +T +G +Y+FG G+LGHG E P+ + Q +R+
Sbjct: 186 NQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVE------------ 144
+ A G ++ ++ G+VY++G + + G + S PQL+
Sbjct: 246 VSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNN 305
Query: 145 ----------------------------SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+ I +V+ + G +AV++ +G ++TF G
Sbjct: 306 NNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRG 365
Query: 177 NDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+ RLG + ++ P L+ +L+ ++ +++G + L L + G+ V+S G G
Sbjct: 366 DHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK--GL-VFSFGRNDQG 422
Query: 236 KLGHGSRTDEKH-PRLIEQFQLLN------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
+LG G ++++ P+ I+ FQ + + V+AG +H+ + + WG Y
Sbjct: 423 QLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDY 482
Query: 289 GCLG-----HGNEECESVPKVVQA----LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G LG G+ ++P ++ + +++VK I V++G +S DG +YS+GC
Sbjct: 483 GVLGTSIDVQGDR---NLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNA 539
Query: 340 SASLGHNAIADGQGNRHANVLTPQ 363
LG + N LTP+
Sbjct: 540 GQRLGFKS--------DENQLTPK 555
Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
I+I++ + G R+ +I+D G ++ FG+ G G Q + ++P+LV+SL+ F++
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIP--VVQ 206
+ G + VL+ +G V++F + +LG T P ++ + P +++
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLL--NLQPV 262
++AG + +A++ Y+ G G LG + D P LI ++ N++ +
Sbjct: 458 VSAGGYHSIAIS---DNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V++G H + DG + +WG LG ++E + PK
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK------------------K 556
Query: 323 TFVVSEDGDVYSFGCGE 339
F+ S+D F CGE
Sbjct: 557 CFINSKDSKPLLFTCGE 573
Score = 62.8 bits (151), Expect = 5e-09, Method: Composition-based stats.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 67/325 (20%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVV 205
+V + G ++ ++ +G +YTF G +LGH ++ P VE T ++ VV
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVE---FFQTKPSLRVV 246
Query: 206 QIAAGYCYLLALA-CQPSGMAVYSVG----CGLGGKLGHGSRTDEKH-PRLIE------- 252
IA G + LAL C VYS G C LG LG+GS + P+LI
Sbjct: 247 SIANGGKHSLALTICG----KVYSWGGNDSCQLG--LGNGSSSSYYSLPQLINFNISYNN 300
Query: 253 -------------------------------QFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
++ V ++ G +AV+ G +
Sbjct: 301 NNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLF 360
Query: 282 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
T+G G +G LG G + +S PK+VQ+L I +++G + V++ G V+SFG +
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRND 420
Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
LG ++ Q + Q+ ++ I++ H+ A++++
Sbjct: 421 QGQLGIGCFSNQQ------TIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDT 474
Query: 400 YAFGAGDKGQLGIELVNNQTERGNP 424
YA+G D G LG ++ Q +R P
Sbjct: 475 YAWGRSDYGVLGTS-IDVQGDRNLP 498
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 42/195 (21%)
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV---QALND 310
++ N Q +V ++ GA H++ + G + T+G G G LGHGN E S PK+V Q
Sbjct: 183 EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPS 242
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---- 366
++ + +A G + ++ G VYS+G +S LG G G+ + PQL+
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGL-----GNGSSSSYYSLPQLINFNIS 297
Query: 367 -----------------------------SLKQVNERVVQISLTNSIYWNAHTFALTESG 397
+ + +I + + +T+ G
Sbjct: 298 YNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKG 357
Query: 398 KLYAFGAGDKGQLGI 412
L+ FG GD G+LG+
Sbjct: 358 LLFTFGRGDHGRLGL 372
Score = 55.8 bits (133), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 226 VYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+++ G G G+LG G ++ + P+L++ Q + + +++G H+ V+ G V ++
Sbjct: 359 LFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFI--IDMSSGGGHSLVLTNKGLVFSF 416
Query: 284 GWGRYGCLGHGN-EECESVPKVVQALND--------VKAIHVATGDYTTFVVSEDGDVYS 334
G G LG G +++PK +Q + I V+ G Y + +S++ D Y+
Sbjct: 417 GRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYA 476
Query: 335 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 394
+G + LG + D QG+R+ P L+ S V + V I +++ H A++
Sbjct: 477 WGRSDYGVLGTSI--DVQGDRN----LPVLINSNSVVVDNVKFIDVSSGF---QHNVAMS 527
Query: 395 ESGKLYAFGAGDKGQLGIELVNNQ 418
G LY++G +LG + NQ
Sbjct: 528 IDGSLYSWGCNAGQRLGFKSDENQ 551
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 16/282 (5%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PH 193
+++P + L N V+Q ++G +++ GR+ T+ + G T P VE P
Sbjct: 329 ISTPLRLPML-NTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGAVEQMQPQ 386
Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+ LE V I + C L C + + G G G LGHG+ D P+++E
Sbjct: 387 FISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEA 446
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
LL + V V+ GA H V + V +WG G G LG ++ + P+ V D +A
Sbjct: 447 --LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEA 504
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH----ANVLTPQLVTSLK 369
V G + ++S + + G LG + ++ + V QLV S
Sbjct: 505 QRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAP 564
Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
E++V I + AH+ A+TE G+ + FG+ GQLG
Sbjct: 565 LNTEKIVYIDI-----GTAHSVAVTEKGQCFTFGSNQHGQLG 601
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 158/364 (43%), Gaps = 46/364 (12%)
Query: 88 PIR-SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV--- 143
P+R + +IQ + G + M ++ +G++ + S G E + G PQ +
Sbjct: 332 PLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRF 391
Query: 144 -ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
E + + + G+ FT L+ G + TF G++ LGH NDV ++ L
Sbjct: 392 LEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNF-NDVTQPKIVEALLGY 450
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+VQ++ G ++LA+ + V+S G G G+LG ++ P+ + Q V
Sbjct: 451 ELVQVSCGASHVLAVTNE---REVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRV 507
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG----HGNEECESVPKV--------VQA--L 308
+ G + ++ ++ G R+ LG G EE S +V VQ+ L
Sbjct: 508 L--CGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPL 565
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
N K +++ G + V+E G ++FG + LG + R + V P V+ L
Sbjct: 566 NTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSH------RRSSRV--PYQVSGL 617
Query: 369 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 428
+ +T + +A T A+ G++Y +G G +G+LG + + G P+ V
Sbjct: 618 Q---------GITMAACGDAFTLAIGAEGEVYTWGKGARGRLG----RKEEDFGIPKPVQ 664
Query: 429 IDLS 432
+D S
Sbjct: 665 LDES 668
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 28/279 (10%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+ +T +G++ +FGS S+G LGHG + +P+ + +L G ++Q + GA + +++
Sbjct: 410 TTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNER 469
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-GNFFTAVLSREGRVYTF 173
+V+++G+ G Q + PQ V SL F Q + G + ++S + ++
Sbjct: 470 EVFSWGRGDNGRLGLATQDSH--NCPQQV-SLPADFEAQRVLCGVDCSMIMSTQHQILAC 526
Query: 174 SWGNDARLGHHT-----EPND---VEPHPLLGTLENIP-----VVQIAAGYCYLLALACQ 220
+LG EP+ VE L +++ P +V I G + +A+
Sbjct: 527 GNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVT-- 584
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGR 279
++ G G+LG R + P +Q+ LQ + +AA G +G +G
Sbjct: 585 -EKGQCFTFGSNQHGQLGCSHRRSSRVP-----YQVSGLQGITMAACGDAFTLAIGAEGE 638
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V TWG G G LG EE +PK VQ L++ A V +
Sbjct: 639 VYTWGKGARGRLGR-KEEDFGIPKPVQ-LDESHAFTVTS 675
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 135/321 (42%), Gaps = 26/321 (8%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPI-RSLQG---IRI 97
E Q G + VT G + ++ + S SG+ E+ +P+ I R L+G + I
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTI 400
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ G T ++D G + FG S G +G VT P++VE+L +VQ + G
Sbjct: 401 KSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHG--NFNDVTQPKIVEALLGYELVQVSCG 458
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
++ E V+++ G++ RLG T+ + P + + ++ G + +
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQ-VSLPADFEAQRVLCGVDCSMIM 517
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ------FQLLNLQP------VVVA 265
+ Q + + G KLG + + P Q FQL+ P V +
Sbjct: 518 STQ---HQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYID 574
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
G H+ V + G+ T+G ++G LG + VP V L + A GD T
Sbjct: 575 IGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITM--AACGDAFTLA 632
Query: 326 VSEDGDVYSFGCGESASLGHN 346
+ +G+VY++G G LG
Sbjct: 633 IGAEGEVYTWGKGARGRLGRK 653
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+AVT KG ++FGSN GQLG P + LQGI + AA G T+ I
Sbjct: 576 GTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITM--AACGDAFTLAI 633
Query: 111 SDAGQVYAFGKDSFG-----EAEYGV 131
G+VY +GK + G E ++G+
Sbjct: 634 GAEGEVYTWGKGARGRLGRKEEDFGI 659
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 120/285 (42%), Gaps = 19/285 (6%)
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGT--LENI 202
+ N VVQ A G A ++R GR+ + G P VE P P + LE
Sbjct: 329 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQ 388
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V I C AC + + G G G LGHGS TD P ++E LL + V
Sbjct: 389 SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA--LLGYEMV 446
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
VA GA H + + + WG G G LG G E S P+ V +A V G +
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDS 506
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQGN-RHANV---LTPQLVTSLKQVNERVVQI 378
+ +++ G + G LG + ++ G+ H V L+ L+ S E ++ I
Sbjct: 507 SMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSI 566
Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 423
L AH+ A+T SG Y FG+ GQLG T RG+
Sbjct: 567 DL-----GTAHSAAVTASGDCYTFGSNQHGQLG-----TNTRRGS 601
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 47/364 (12%)
Query: 88 PIR-SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ----- 141
P+R + ++Q AAG + ++ +G++ + G A G V PQ
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGSLLPGAVEQPQPQFIS 382
Query: 142 -LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+E + + A G+FFTA L+ G + TF G++ LGH + D+ ++ L
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSL-TDISQPTIVEALL 441
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+VQ+A G ++LAL+ + +++ G G G+LG G+R P+ + Q
Sbjct: 442 GYEMVQVACGASHVLALSTE---RELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQ 498
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--HGNEECESVP--KVVQAL-------- 308
VV G + ++ G+ G R+ LG H + E VP +V +AL
Sbjct: 499 RVV--CGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSA 556
Query: 309 --NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 366
+ + + G + V+ GD Y+FG + LG N +G+R P V
Sbjct: 557 PLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNT---RRGSR-----APCKVQ 608
Query: 367 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 426
L+ + +V +A T A+ ++Y++G G +G+LG + G P
Sbjct: 609 GLEGIKMAMVACG-------DAFTVAIGAESEVYSWGKGARGRLG----RRDEDAGLPRP 657
Query: 427 VDID 430
V +D
Sbjct: 658 VQLD 661
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 21/262 (8%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG+ + +P + +L G ++Q A GA + +S +++
Sbjct: 406 LTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELF 465
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
A+G+ G G + + + PQ V + G + +L+ G+
Sbjct: 466 AWGRGDSGRLGLGTRESH--SCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNR 523
Query: 178 DARLG--HHTEPNDVEPH---------PLLGT--LENIPVVQIAAGYCYLLALACQPSGM 224
+LG H + + PH LLG+ L+ P++ I G + + A SG
Sbjct: 524 FNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAH--SAAVTASG- 580
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
Y+ G G+LG +R + P ++ + + + +VA G +G + V +WG
Sbjct: 581 DCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKM--AMVACGDAFTVAIGAESEVYSWG 638
Query: 285 WGRYGCLGHGNEECESVPKVVQ 306
G G LG +E+ +P+ VQ
Sbjct: 639 KGARGRLGRRDEDA-GLPRPVQ 659
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 31 LRFLLAGEACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
L F L G A +E +I G HS AVT+ G Y+FGSN GQLG T P +
Sbjct: 548 LSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKV 607
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-N 148
+ L+GI++ A G T+ I +VY++GK + G + L QL E+
Sbjct: 608 QGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYT 667
Query: 149 IFVVQAAIGNFFTAVLS 165
+ V GN AV S
Sbjct: 668 VTSVSCCHGNTLLAVRS 684
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRP-RPIRSLQGIRIIQ 99
+E + + G S+ +T G + GSN +LG H + EE P + + ++
Sbjct: 495 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLG 554
Query: 100 AAA-----------GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
+A G + ++ +G Y FG + G + G + +P V+ L+
Sbjct: 555 SAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHG--QLGTNTRRGSRAPCKVQGLEG 612
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDV---EPHP 194
I + A G+ FT + E VY++ G RLG E P V E HP
Sbjct: 613 IKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHP 665
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 155/328 (47%), Gaps = 29/328 (8%)
Query: 83 EWRPRPIRSLQGIRIIQAAA----GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
+W + S Q I I+ A A + ++D +V+ FG + G + LV
Sbjct: 6 KWPIFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLV- 64
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLL 196
P+ +E L + + G+ +LS E V ++WG++ ++LG+ T + P +
Sbjct: 65 -PKKLEGLCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQGIAPVQVC 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L VV++A G + +ALA V++ G G++G GS ++ PR +
Sbjct: 123 TNLLIKQVVEVACGSHHSMALAADGE---VFAWGYNNCGQVGSGSTANQPTPRKVTN--C 177
Query: 257 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
L+++ VV +A G + V +G V WG+ G LG GN + P V AL+ V
Sbjct: 178 LHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQ 237
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 375
+ G T ++++G +Y++G L G GN++ N+L+P + K ERV
Sbjct: 238 IVCGYAHTLALTDEGLLYAWGANTYGQL-------GTGNKN-NLLSPAHIMVEK---ERV 286
Query: 376 VQISLTNSIYWNAHTFALTESGKLYAFG 403
V+I+ +S + +A A T+ G +Y +G
Sbjct: 287 VEIAACHSAHTSA---AKTQGGHVYMWG 311
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAG 105
+ G HS+A+ + G V+++G N+ GQ+G G+T + PR + + I R++ A G
Sbjct: 132 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQT 191
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D G+VY +G + G+ G G +L +P V +L ++ V Q G T L+
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
EG +Y + +LG + N + P ++ +E VV+IAA
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIM--VEKERVVEIAA 291
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 13/252 (5%)
Query: 40 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRII 98
C ++ S + H + T GVVY++G N QLG+GTT + P + +L +++
Sbjct: 72 CGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVV 131
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIG 157
+ A G+ +M ++ G+V+A+G ++ G+ G + +P+ V + +I VV A G
Sbjct: 132 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTPRKVTNCLHIKRVVGIACG 189
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ + G VY + + + +LG N + P + L ++ V QI GY + LAL
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHSVCVNQIVCGYAHTLAL 248
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVG 275
G+ +Y+ G G+LG G++ + P ++E+ +++ + A +A
Sbjct: 249 T--DEGL-LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVE---IAACHSAHTSAAKT 302
Query: 276 QDGRVCTWGWGR 287
Q G V WG R
Sbjct: 303 QGGHVYMWGQCR 314
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VY+ G +LG+G+ P + LL Q V VA G+ H+ + DG V WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + P KV L+ + + +A G ++ V ++G+VY +G + LG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
GN + N LTP V +L V + + AHT ALT+ G LYA+GA
Sbjct: 215 -------LGN-NGNQLTPVRVAALHSV-------CVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 405 GDKGQLGIELVNN 417
GQLG NN
Sbjct: 260 NTYGQLGTGNKNN 272
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G LG G P+ +E ++ + +G H + +DG V WG
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G P +V L + + VA G + + ++ DG+V+++G +G
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
+ A N TP+ VT+ + +RVV I+ + + A+ ++G++Y +G
Sbjct: 162 SGSTA--------NQPTPRKVTNCLHI-KRVVGIACGQT-----SSMAVLDNGEVYGWGY 207
Query: 405 GDKGQLGIELVNNQTERGNPERV 427
GQLG+ N + P RV
Sbjct: 208 NGNGQLGL---GNNGNQLTPVRV 227
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 254 FQLLNLQPV-------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
F LL+ Q + V A A V + V +G CLG G+ + VPK ++
Sbjct: 10 FTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE 69
Query: 307 AL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQ 363
L +K++ +G + + +EDG VY++G HN + G G + + Q
Sbjct: 70 GLCGKKIKSLSYGSGPHV-LLSTEDGVVYAWG--------HNGYSQLGNGTTNQGIAPVQ 120
Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
+ T+L + ++VV+++ + H+ AL G+++A+G + GQ+G NQ
Sbjct: 121 VCTNL--LIKQVVEVACGSH-----HSMALAADGEVFAWGYNNCGQVGSGSTANQ 168
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 16/256 (6%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGI 95
EA C ++ G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 69 EALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK 128
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
++I+ A G+ +M ++ G+++A+G ++ G+ G + T ++ L VV A
Sbjct: 129 QVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-PTPRKVTNCLHTKRVVNIA 187
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + + G VY + + + +LG N + P + L + V QI GY + L
Sbjct: 188 CGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHGMCVNQIVCGYAHTL 246
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----A 271
AL G+ +Y+ G G+LG GS+ + L+ Q++ + V+ A H +
Sbjct: 247 ALT--DEGL-LYAWGANTYGQLGTGSKNN-----LLSPTQIMVEKERVIEIAACHSTHTS 298
Query: 272 AVVGQDGRVCTWGWGR 287
A Q G V WG R
Sbjct: 299 AAKTQGGHVYMWGQCR 314
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VY+ G +LG+G+ P + LL Q + VA G+ H+ + DG + WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + P KV L+ + +++A G ++ V + G+VY +G + LG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLG 214
Query: 345 HNAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKLYAF 402
GN + N LTP V +L VN+ V AHT ALT+ G LYA+
Sbjct: 215 -------LGN-NGNQLTPVRVAALHGMCVNQIVCGY---------AHTLALTDEGLLYAW 257
Query: 403 GAGDKGQLGIELVNN 417
GA GQLG NN
Sbjct: 258 GANTYGQLGTGSKNN 272
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 143/303 (47%), Gaps = 25/303 (8%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
A + ++D +V+ FG + G + LV P+ +E+L + + G+ +
Sbjct: 31 ANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEALCGKKIKSLSYGSGPHVL 88
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ E V ++WG++ ++LG+ T + P + L V+++A G + +ALA
Sbjct: 89 LTTEDGV-VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
+++ G G++G GS ++ PR + L+ + VV +A G + V G V
Sbjct: 148 E---LFAWGYNNCGQVGSGSTANQPTPRKVTN--CLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
WG+ G LG GN + P V AL+ + + G T ++++G +Y++G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 341 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 400
LG G N N+L+P T + ERV++I+ +S + +A A T+ G +Y
Sbjct: 263 GQLG-----TGSKN---NLLSP---TQIMVEKERVIEIAACHSTHTSA---AKTQGGHVY 308
Query: 401 AFG 403
+G
Sbjct: 309 MWG 311
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G LG G P+ +E ++ + +G H + +DG V WG
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G P +V L + I VA G + + ++ DG+++++G +G
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 161
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
+ A N TP+ VT+ +RVV I+ + + A+ +SG++Y +G
Sbjct: 162 SGSTA--------NQPTPRKVTNCLHT-KRVVNIACGQT-----SSMAVLDSGEVYGWGY 207
Query: 405 GDKGQLGIELVNNQTERGNPERV 427
GQLG+ N + P RV
Sbjct: 208 NGNGQLGL---GNNGNQLTPVRV 227
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVA 317
+ V A A V + V +G CLG G+ + VPK ++AL +K++
Sbjct: 23 KACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYG 82
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVV 376
+G + + +EDG VY++G HN + G G + + Q+ T+L + ++V+
Sbjct: 83 SGPHV-LLTTEDGVVYAWG--------HNGYSQLGNGTTNQGIAPVQVCTNL--LIKQVI 131
Query: 377 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
+++ + H+ AL G+L+A+G + GQ+G NQ
Sbjct: 132 EVACGSH-----HSMALAADGELFAWGYNNCGQVGSGSTANQ 168
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 46/289 (15%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG + +P + +L G ++Q A GA + +S G+++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELF 471
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
A+G+ G G + + PQ V + G + +L+ GRV
Sbjct: 472 AWGRGDGGRLGLGTRESH--NCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNR 529
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+LG D EP +P Q+ AL+ P G A
Sbjct: 530 FNKLGLDHLSLDEEP---------VPYQQVEE------ALSFTPLGSAP----------- 563
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
++Q LL V G H+A + G T+G ++G LG +
Sbjct: 564 -------------LDQEPLL-----CVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRR 605
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
P VQ L +K + VA GD T V +G+VYS+G G LG
Sbjct: 606 VSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRR 654
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 121/284 (42%), Gaps = 19/284 (6%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPL 195
++SP + L N VVQ A G A ++R GR+ + G P VE P P
Sbjct: 327 LSSPLRLPML-NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQ 385
Query: 196 LGT--LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+ LE V I C L AC + + G G G LGHG+ TD P ++E
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEA 445
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
LL + V VA GA H + DG + WG G G LG G E + P+ V +A
Sbjct: 446 --LLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEA 503
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA------DGQGNRHANVLTPQLVTS 367
V G ++ +++ G V + G LG + ++ Q A TP
Sbjct: 504 QRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAP 563
Query: 368 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
L Q E ++ + L AH+ A+T SG Y FG+ GQLG
Sbjct: 564 LDQ--EPLLCVDL-----GTAHSAAITASGDCYTFGSNQHGQLG 600
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRP----------RPIR 90
+E + + G S+ +TS G V + GSN +LG H + +EE P P+
Sbjct: 501 QEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLG 560
Query: 91 S--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
S L ++ G + I+ +G Y FG + G + G ++ +P V+ L+
Sbjct: 561 SAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHG--QLGTSSRRVSRAPCRVQGLEG 618
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDV---EPHPLLGT 198
I +V A G+ FT + EG VY++ G RLG E P V E HP + T
Sbjct: 619 IKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVT 675
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS A+T+ G Y+FGSN GQLG + P ++ L+GI+++ A G T+ +
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV-VQAAIGNFFTAVLS 165
G+VY++GK + G + L QL E+ + V GN AV S
Sbjct: 635 GAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSCCHGNTLLAVRS 690
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 34/167 (20%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H + + + G V+S+G+ GQLGHGT E E PR + +LQG+R+ + AAG ++ +
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCL 228
Query: 111 SDAGQVYAFGKDSFGE------------------AEYGVQGTK----------------L 136
S+ G +Y +G + G+ E G K +
Sbjct: 229 SETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAI 288
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
P L++ V A+ G+ TAV++R G +YT+ WG +LGH
Sbjct: 289 QPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGH 335
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+R+ Q GA +L+ AGQV+++G G+ +G +L P+L+E+L+ + + +
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAEL--EPRLLEALQGLRMAKV 218
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP---NDVEPHPLL-----GTLENIPVVQ 206
A G + + LS G +Y + W +L T N E G E + V
Sbjct: 219 AAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVAD 278
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
A ++ A QP P L++ L V+ +
Sbjct: 279 AGAPAHFI---AIQP-------------------------FPALLDLP--LGSDAVMASC 308
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTF 324
G+ H AVV + G + TWGWG+YG LGH + P V+ ++ V G + T+
Sbjct: 309 GSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTY 368
Query: 325 VVSEDGD 331
V + + D
Sbjct: 369 VYAMERD 375
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA H ++ G+V +WG GR+G LGHG E E P++++AL ++ VA G + + +
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCL 228
Query: 327 SEDGDVYSFGCGESASLG--------------------------HNAIADGQGNRHANVL 360
SE GD+Y +G ES L A+AD H +
Sbjct: 229 SETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAI 288
Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411
P + V S + HT +T +G+LY +G G GQLG
Sbjct: 289 QPFPALLDLPLGSDAVMASCGSR-----HTAVVTRTGELYTWGWGKYGQLG 334
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 302 PKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 360
P Q L +++ + G ++ G V+S+G G LGH + L
Sbjct: 151 PPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLE--------AEL 202
Query: 361 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL---VNN 417
P+L+ +L+ + R+ +++ W H+ L+E+G +Y +G + GQL + N
Sbjct: 203 EPRLLEALQGL--RMAKVAAGG---W--HSVCLSETGDIYIWGWNESGQLALPTRSGTEN 255
Query: 418 QTERGNPERVDID 430
+ ER ++ D
Sbjct: 256 KAEREEATELNED 268
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 47/339 (13%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAAGAGRTM 108
AG H++ +T G +YSFG N G LG T+E+ +P + L G + +A +
Sbjct: 81 AGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSAC 140
Query: 109 LISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
L+ D G+V+A+G +DS G + G K ++ ++ A G +L+
Sbjct: 141 LLED-GRVFAWGSFRDSHGNMGLTIDGNKRTP----IDLMEGTVCCSIASGADHLVILTT 195
Query: 167 EGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLLGTLENIPVVQI-AAGYCYL 214
G+V+T +LG +E + + P L+ T P I A YC
Sbjct: 196 AGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAK-PFEAIWATNYCTF 254
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAW 269
+ + +++ G +L H ++ E F L ++ + +A G
Sbjct: 255 MR---ESQTQVIWATGLNNFKQLAHETKGKE--------FALTPIKTELKDIRHIAGGQH 303
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H ++ D + G YG LG G+ ++ P +V+ L + K + V G+ ++ V+
Sbjct: 304 HTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTI 362
Query: 329 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 367
DG +YS+G G + LG + DG + L P +V S
Sbjct: 363 DGKLYSWGSGVNNQLG---VGDGD-----DELEPIVVVS 393
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 45/367 (12%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAGQVYAFG 120
G V G+ GQLG G E+ + + + GI + +AG ++++ +G +Y+FG
Sbjct: 42 GNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFG 99
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--- 177
+ G + P L++ + A G+ +A L +GRV F+WG+
Sbjct: 100 CNDEGALGRDTSEDGSESKPDLIDLPGKALCISA--GDSHSACLLEDGRV--FAWGSFRD 155
Query: 178 -DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+G + N P L+ E IA+G +L+ L + V++VGC G+
Sbjct: 156 SHGNMGLTIDGNKRTPIDLM---EGTVCCSIASGADHLVILT---TAGKVFTVGCAEQGQ 209
Query: 237 LGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-------AVVGQDGRVCTW--GWG 286
LG S R+ R ++ L Q ++ A + A + + W G
Sbjct: 210 LGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLN 269
Query: 287 RYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ L H + E ++ + L D++ H+A G + T +++ D G E LG
Sbjct: 270 NFKQLAHETKGKEFALTPIKTELKDIR--HIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 346 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 405
+ D V P +V K++ E++V + ++A+T GKLY++G+G
Sbjct: 328 GDVKD-------VVEKPTIV---KKLTEKIVSVGC-----GEVCSYAVTIDGKLYSWGSG 372
Query: 406 DKGQLGI 412
QLG+
Sbjct: 373 VNNQLGV 379
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 30/310 (9%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+A C AG HS + G V+++GS G T + + PI ++G
Sbjct: 124 LPGKALC------ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEG 177
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE----AEYGVQGT------KLVTSPQLVE 144
A+GA ++++ AG+V+ G G+ +E + G L+ QL+
Sbjct: 178 TVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLII 237
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRV-YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ F A N+ T + + +V + N +L H T+ + P+ L++I
Sbjct: 238 TRAKPFEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI- 295
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPV 262
IA G + + L + + VG G+LG G D + P ++++ L + V
Sbjct: 296 -RHIAGGQHHTVILT---TDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKK---LTEKIV 348
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV-KAIHVAT--G 319
V G + V DG++ +WG G LG G+ + E P VV + N K + +A+ G
Sbjct: 349 SVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGG 408
Query: 320 DYTTFVVSED 329
+ F+V D
Sbjct: 409 QHAIFLVKAD 418
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V G G G LG G + E ++ A+ ++ G V+++ GD+YSFGC
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILER-KRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGC 100
Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
+ +LG + DG ++ P L+ + + + IS +S H+ L E G
Sbjct: 101 NDEGALGRDTSEDGSESK------PDLI----DLPGKALCISAGDS-----HSACLLEDG 145
Query: 398 KLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 431
+++A+G+ G +G+ + N+ R IDL
Sbjct: 146 RVFAWGSFRDSHGNMGLTIDGNK-------RTPIDL 174
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 113/286 (39%), Gaps = 62/286 (21%)
Query: 189 DVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--E 245
D+ L + IP V I+AG + L L SG +YS GC G LG + D E
Sbjct: 60 DILERKRLSPVAGIPDAVDISAGGMHNLVLT--KSG-DIYSFGCNDEGALGRDTSEDGSE 116
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECESVPK 303
P LI+ L + + ++AG H+A + +DGRV WG R +G +G + + P
Sbjct: 117 SKPDLID----LPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP- 171
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNR-HANVL 360
+ + +A+G +++ G V++ GC E LG G+G R ++L
Sbjct: 172 -IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLL 230
Query: 361 TP-QLV----------------TSLKQVNERVVQISLTNSIYWNAH-------------- 389
P QL+ T +++ +V+ + N+ AH
Sbjct: 231 RPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT 290
Query: 390 --------------TFALTESGKLYAFGAGDKGQLGIELVNNQTER 421
T LT K G + G+LG+ V + E+
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEK 336
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VY+ G LGHGS+ + HP L++ F + V +H+ + Q G+V T G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G LGHG+E+ VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+VYT G RLGH E + P L+ L Q+AA + + L VY+
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPR-LVEGLNGHNCSQVAAAKDHTVVLT---EDGCVYT 252
Query: 229 VGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-- 285
G + +LG + PR I+ L + VAAG +H + ++ V T G
Sbjct: 253 FGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG 311
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 340 SAS 342
AS
Sbjct: 372 MAS 374
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q + HS+ ++ KG VY+ G G+LGHG + PR + L G Q AA
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDH 240
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVL 164
T+++++ G VY FG + F + + P+ +++ LK ++ A G F T +
Sbjct: 241 TVVLTEDGCVYTFGLNIFHQLGI-IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLW 299
Query: 165 SREGRVYTFSWGNDARLGHHTEPN 188
+RE VYT N +LG +PN
Sbjct: 300 TREA-VYTMGL-NGGQLGCLLDPN 321
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGC 337
V TWG LGHG++ + P++V + + V + + +S+ G VY+ G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
G LGH D Q L P+LV L N V + HT LTE G
Sbjct: 204 GPGGRLGH---GDEQ-----TCLVPRLVEGLNGHNCSQVAAA-------KDHTVVLTEDG 248
Query: 398 KLYAFGAGDKGQLGI 412
+Y FG QLGI
Sbjct: 249 CVYTFGLNIFHQLGI 263
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 29 LVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR- 85
LV R + L G C SQ A H++ +T G VY+FG N QLG
Sbjct: 218 LVPRLVEGLNGHNC-----SQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNV 272
Query: 86 PRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV----QGTKLVTS 139
PR I++ L+G II AAG T+L + VY G + G G K VT+
Sbjct: 273 PRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMG---LNGGQLGCLLDPNGEKCVTA 328
Query: 140 PQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFS 174
P+ V +L K+I + A + T ++ G +Y +
Sbjct: 329 PRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLA 365
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV---SEDGDVYSFGC 337
C W ++G V +Q + A+ + D T VV ++ DVY++G
Sbjct: 101 CVWSLLKHG-----------VSLYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGD 149
Query: 338 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 397
+ +LGH + Q ++H P+LV + + Q+ L H+ L++ G
Sbjct: 150 NTNFTLGHGS----QNSKHH----PELVDLFSRSGIYIKQVVLC-----KFHSVFLSQKG 196
Query: 398 KLYAFGAGDKGQLG 411
++Y G G G+LG
Sbjct: 197 QVYTCGHGPGGRLG 210
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 140/358 (39%), Gaps = 51/358 (14%)
Query: 40 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 99
C R + G GHS VT G ++ G N GQLG G TE+ P +SL G I Q
Sbjct: 46 CKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQ 105
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGN 158
A G T+++++ GQV + G +SFG + GV G + PQ +E K V AA G
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFG--QLGVPHGPRRCVVPQAIELHKEKVVCIAA-GL 162
Query: 159 FFTAVLSREGRVYTFSWGND-ARLGHHTEPNDV--------EPHPLLGTLENIPVVQIAA 209
+ G V F WG A G P EP + G LEN + + A
Sbjct: 163 RHAVAATASGIV--FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLA 219
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----PRLIEQFQLLNLQPVVVA 265
G + +L VY + G HG +E P+ IE N + +
Sbjct: 220 GSDHSASLT---DAGEVY-----VWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIW 271
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---------VPKVVQALNDVKAIHV 316
+G H + G++ TWG YG LG E E +P + + H
Sbjct: 272 SGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHC 331
Query: 317 ATGDYTTFVVSED------GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 368
TG SE G YS+G E H DG ANV P+ V +L
Sbjct: 332 LTGATEVSCGSEHNLAIIGGVCYSWGWNE-----HGMCGDG---TEANVWAPKPVQAL 381
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 130/308 (42%), Gaps = 44/308 (14%)
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+S+G+ G + L+ QL + K V + G +AV++ G ++ D +L
Sbjct: 23 NSYGQLGLGHKEDVLLPQ-QLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQL 81
Query: 182 G-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-- 238
G HTE D+ +L P+ Q+A G+ + + L V S G G+LG
Sbjct: 82 GLGHTE--DIPYFTPCKSLFGCPIQQVACGWDFTIMLT---ENGQVLSCGSNSFGQLGVP 136
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
HG R P+ IE L + V +AAG HA G V WG G C G C
Sbjct: 137 HGPRRCVV-PQAIE---LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASC---GRRLC 189
Query: 299 E----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
P V L + KA+ V G + +++ G+VY +G + L + A
Sbjct: 190 PGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA- 248
Query: 349 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN--AHTFALTESGKLYAFGAGD 406
A + PQ + + NE+V I W+ H A TE+GK++ +G D
Sbjct: 249 --------AFLPVPQKIEAHCFQNEKVTAI-------WSGWTHLVAQTETGKMFTWGRAD 293
Query: 407 KGQLGIEL 414
GQLG +L
Sbjct: 294 YGQLGRKL 301
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 117/304 (38%), Gaps = 47/304 (15%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGI-----RIIQ 99
Q G +I +T G V S GSNS GQLG HG PR Q I +++
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG-------PRRCVVPQAIELHKEKVVC 157
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-----VTSPQLVESLKNIFVVQA 154
AAG + + +G V+ +G G L P V L+N +
Sbjct: 158 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 217
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLLGTLENIPVVQIAAG 210
G+ +A L+ G VY + +L + P +E H +N V I +G
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAH----CFQNEKVTAIWSG 273
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-----KHPRLIEQFQLLNLQP---- 261
+ +L+A Q +++ G G+LG T E K + + N P
Sbjct: 274 WTHLVA---QTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPH 330
Query: 262 -----VVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
V+ G+ H A++G G +WGW +G G G E PK VQAL +
Sbjct: 331 CLTGATEVSCGSEHNLAIIG--GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLL 388
Query: 316 VATG 319
V G
Sbjct: 389 VGCG 392
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 23/287 (8%)
Query: 70 NSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAE 128
NS GQLG G E+ P+ + R + + G G + +++D G ++ G + G +
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDG--Q 80
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEP 187
G+ T+ + +SL + Q A G FT +L+ G+V + + +LG H
Sbjct: 81 LGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR 140
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL---GGKLGHGSRTD 244
V P + L VV IAAG + A+A SG+ V+ G GL G +L G
Sbjct: 141 RCVVPQAI--ELHKEKVVCIAAGLRH--AVAATASGI-VFQWGTGLASCGRRLCPGQTLP 195
Query: 245 ----EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 299
K P + + N + + V AG+ H+A + G V WG ++G L NE
Sbjct: 196 LFFTAKEPSRVTGLE--NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFL 251
Query: 300 SVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP+ ++A + K + +G +E G ++++G + LG
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
C ++ G H++A+ GV YS+G N G G GT W P+P+++L +
Sbjct: 331 CLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLV 389
Query: 101 AAGAGRTMLI 110
GAG ++ +
Sbjct: 390 GCGAGHSLAL 399
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 36/170 (21%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + + G V+S+G GQLGHGT E E PR + +LQG+ + + AAG ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 111 SDAGQVYAFGKDSFGE--------AEYGVQGTKLVTS----------------------- 139
S+ G +Y +G + G+ AE G + T
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFI 285
Query: 140 -----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
P L++ V+A+ G+ TAV++R G +YT+ WG +LGH
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA HA ++ G+V +WG GR+G LGHG E E P++++AL + VA G + + V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 327 SEDGDVYSFGCGESASLG---HNAIADGQG-NRHANVLTPQ------------------- 363
SE GD+Y +G ES L N DG+ R A L
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFI 285
Query: 364 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 423
V + + + + + HT +T +G+LY +G G GQLG E + T
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE---DTTSLDR 342
Query: 424 PERVD 428
P RV+
Sbjct: 343 PRRVE 347
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 36/241 (14%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+R Q GA +L+ AGQV+++G G+ +G +L P+L+E+L+ + + +
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLVMAEV 215
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G + + +S G +Y + W +L P E+ V A
Sbjct: 216 AAGGWHSVCVSETGDIYIWGWNESGQLAL----------PTRNLAEDGETVAREA----- 260
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQ-LLNL----QPVVVAAGA 268
G V G G+ P + ++ F LL+L V + G+
Sbjct: 261 --TELNEDGSQVKRTG---------GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGS 309
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVV 326
H AVV + G + TWGWG+YG LGH + P+ V+ D ++ V G + T+V
Sbjct: 310 RHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVY 369
Query: 327 S 327
+
Sbjct: 370 A 370
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
+++A + G ++ G V+S+G G LGH + L P+L+ +L+
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLE--------AELEPRLLEALQ 208
Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
+ V + + H+ ++E+G +Y +G + GQL + N
Sbjct: 209 GL----VMAEVAAGGW---HSVCVSETGDIYIWGWNESGQLALPTRN 248
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 108/252 (42%), Gaps = 20/252 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G GHS VT +G ++ G N GQLG G TEE P +SL G I Q A G T+++
Sbjct: 57 GGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIIL 116
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQV + G +SFG + GV G + PQ +E L+ VV A G + G
Sbjct: 117 TENGQVLSCGSNSFG--QLGVPHGPRRCVIPQAIELLREK-VVSIAAGLRHALAATASGT 173
Query: 170 VYTFSWGND-ARLGHHTEPNDV--------EPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
V F WG A G P EP + G LEN V + AG + +L
Sbjct: 174 V--FQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTG-LENSQAVCVLAGSDHSASLT-- 228
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y G G+L P+ IE N + V +G H G+V
Sbjct: 229 -DAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKV 286
Query: 281 CTWGWGRYGCLG 292
TWG YG LG
Sbjct: 287 FTWGRADYGQLG 298
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 38/314 (12%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ A ++A+G +S+G+ G + ++++ QL + K+ + + G +AV++ EG
Sbjct: 11 VPTAAALFAWGANSYGQLGLGHK-EDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++ D +LG HTE +V +L + Q+A G+ + + L V S
Sbjct: 70 LFVCGLNKDGQLGLGHTE--EVLYFTPCKSLLGCAIQQVACGWDFTIILT---ENGQVLS 124
Query: 229 VGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
G G+LG HG R P+ IE LL + V +AAG HA G V WG G
Sbjct: 125 CGSNSFGQLGVPHGPRRCVI-PQAIE---LLREKVVSIAAGLRHALAATASGTVFQWGTG 180
Query: 287 -----RYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
R C G + P V L + +A+ V G + +++ G++Y +G +
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNK 240
Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN--AHTFALTESG 397
L A A +L PQ + + NE++ + W+ H A T +G
Sbjct: 241 HGQLASQA---------AFLLLPQRIEARCFQNEKIAAV-------WSGWTHLVAQTVTG 284
Query: 398 KLYAFGAGDKGQLG 411
K++ +G D GQLG
Sbjct: 285 KVFTWGRADYGQLG 298
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 133/306 (43%), Gaps = 21/306 (6%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTMLI 110
P S AV + ++++G+NS GQLG G E+ + + + I + G G + ++
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVV 64
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G ++ G + G+ G L +P +SL + Q A G FT +L+ G+V
Sbjct: 65 TDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQV 122
Query: 171 YTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+ + +LG H V P + L VV IAAG + ALA SG V+
Sbjct: 123 LSCGSNSFGQLGVPHGPRRCVIPQAI--ELLREKVVSIAAGLRH--ALAATASGT-VFQW 177
Query: 230 GCGL---GGKLGHGSRTD----EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G GL G +L G K P + + N Q V V AG+ H+A + G +
Sbjct: 178 GTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLE--NSQAVCVLAGSDHSASLTDAGELYV 235
Query: 283 WGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
WG ++G L +P+ ++A + K V +G + G V+++G +
Sbjct: 236 WGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADY 294
Query: 341 ASLGHN 346
LG
Sbjct: 295 GQLGRT 300
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 117/304 (38%), Gaps = 47/304 (15%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGI-----RIIQ 99
Q G +I +T G V S GSNS GQLG HG PR Q I +++
Sbjct: 105 QVACGWDFTIILTENGQVLSCGSNSFGQLGVPHG-------PRRCVIPQAIELLREKVVS 157
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-----VTSPQLVESLKNIFVVQA 154
AAG + + +G V+ +G G L P V L+N V
Sbjct: 158 IAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLLGTLENIPVVQIAAG 210
G+ +A L+ G +Y + +L P +E +N + + +G
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEAR----CFQNEKIAAVWSG 273
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLG------HGSRTDEKHPRLI---EQFQLLNLQP 261
+ +L+A Q V++ G G+LG G ++++ P L Q + P
Sbjct: 274 WTHLVA---QTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLP 330
Query: 262 VV-----VAAGAWHAAVVGQDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
+ ++ G+ H V G VC +WGW +G G G E PK V L +H
Sbjct: 331 CLTGATEISCGSEHNLAV--IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLH 388
Query: 316 VATG 319
V G
Sbjct: 389 VGCG 392
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 13 EAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSS 72
E+E+QD G K L C ++ G H++AV GV +S+G N
Sbjct: 308 ESEKQDPSLPGSGPQKGTPSCLP-----CLTGATEISCGSEHNLAVIG-GVCHSWGWNEH 361
Query: 73 GQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G G GT + W P+P+ L+ + GAG ++ + + A G+
Sbjct: 362 GMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQLPALPALGQ 410
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 25/288 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGAGRTM 108
G HS + S G +++FG GQLGHG + P R + G+ ++ Q A G T+
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTR-VNGLICKVTQIACGRAHTV 893
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++D G+V G S+G+ K+ L L + V A + + ++ +
Sbjct: 894 VLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPL--PLGPLRVRDIATHYYHSICITEDN 951
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
RV F WG N E + ++ I Q+ PS + +
Sbjct: 952 RV--FEWGR----------NPQELKMRMFVMKKIRSAQLKNTE--------DPSSPSPST 991
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G L + + L E L+ V VA G H+A++ +G + TWG G
Sbjct: 992 NGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLD 1051
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LGHGN+ P V N K ++V+ G+ T ++DG V+++G
Sbjct: 1052 YQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWG 1099
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 146/368 (39%), Gaps = 76/368 (20%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
RPR I A GA +++S +GQ+ A+G + FG+ G ++ Q+
Sbjct: 777 RPRAI-----------ACGAEHILVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVDG 824
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTLENI 202
I + A G F +A + +G ++TF WG +LGH N + P + G +
Sbjct: 825 DWPAI--EKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI--C 880
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V QIA G + + L +G + CG G G D K L L+
Sbjct: 881 KVTQIACGRAHTVVLT--DTGRVLV---CGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVR 935
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWG--------------RYGCLGHGNEECE-------SV 301
+A +H+ + +D RV WG R L + + S
Sbjct: 936 DIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGST 995
Query: 302 PKV-----------------VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
P+V V+ D + VA G + +++ +G +Y++G G LG
Sbjct: 996 PRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLG 1055
Query: 345 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 404
H GN++ + Q+ + + V +SL N+ HT A T+ G ++A+G
Sbjct: 1056 H-------GNKNERMEPHQV---FEPNGAKWVNVSLGNN-----HTIASTDDGSVFAWGK 1100
Query: 405 GDKGQLGI 412
D GQ G+
Sbjct: 1101 NDFGQCGV 1108
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VAT 318
+P +A GA H V+ G++ WG R+G G G+ + + Q D AI +A
Sbjct: 777 RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS--FRIANLHQVDGDWPAIEKIAC 834
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
G + + + DG +++FG G LGH G ++N L P V L +V QI
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHG------GRNNSNQLVPTRVNGLIC---KVTQI 885
Query: 379 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 413
+ AHT LT++G++ G+G GQ+G++
Sbjct: 886 ACG-----RAHTVVLTDTGRVLVCGSGSYGQMGVD 915
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS +TS+G +Y++G QLGHG E P + G + + + G T+
Sbjct: 1030 GLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIAS 1089
Query: 111 SDAGQVYAFGKDSFGE 126
+D G V+A+GK+ FG+
Sbjct: 1090 TDDGSVFAWGKNDFGQ 1105
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 140/360 (38%), Gaps = 57/360 (15%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G GHS VT G ++ G N GQLG G TEE R + L+G I Q A G T+++
Sbjct: 57 GGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIML 116
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQV + G ++FG + GV G + PQ +E L+ V AA G + G
Sbjct: 117 TEKGQVLSCGSNAFG--QLGVPHGPRKCVVPQAIECLREKVVCVAA-GLRHALATTATGS 173
Query: 170 VYTFSWGND-ARLGHHTEPND--------VEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
V F WG A G P EP + G LEN V AG + +L
Sbjct: 174 V--FQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTG-LENSTAVCAVAGSDHSASLT-D 229
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+ V+ G+ HG P+ IE + + V +G H +
Sbjct: 230 TGELYVW-------GRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTE 282
Query: 277 DGRVCTWGWGRYGCLGHGNEECE------------------SVPKVVQALNDVKAIHVAT 318
G+V TWG YG LG E E SVP + L A ++
Sbjct: 283 TGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--ATEISC 340
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 378
G V D S+G E H DG +NV TP V +L R++ +
Sbjct: 341 GSEHNLAVIRD-KCCSWGWNE-----HGMCGDGT---ESNVWTPTPVQALPPSPSRLLLV 391
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 136/301 (45%), Gaps = 21/301 (6%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTMLISDA 113
S V++ V++++G+NS GQLG G E+ + P+ + Q I G G + +++D
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDG 67
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G ++ G + G + G+ T+ V + + L+ + Q A G FT +L+ +G+V +
Sbjct: 68 GDLFVCGLNKDG--QLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSC 125
Query: 174 SWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LG H V P + E VV +AAG + ALA +G +V+ G G
Sbjct: 126 GSNAFGQLGVPHGPRKCVVPQAIECLREK--VVCVAAGLRH--ALATTATG-SVFQWGTG 180
Query: 233 L---GGKLGHGSRTD----EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
L G +L G K P + + N V AG+ H+A + G + WG
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGLE--NSTAVCAVAGSDHSASLTDTGELYVWGR 238
Query: 286 GRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
++G L +P+ ++A D K V +G +E G V+++G + L
Sbjct: 239 NKHGQLA-SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQL 297
Query: 344 G 344
G
Sbjct: 298 G 298
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 138/325 (42%), Gaps = 40/325 (12%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREG 168
+S A ++A+G +S+G+ G+ + V PQ + +++ G +AV++ G
Sbjct: 11 VSAAAVLFAWGANSYGQ--LGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGG 68
Query: 169 RVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
++ D +LG HTE +V + L P+ Q+A G+ + + L V
Sbjct: 69 DLFVCGLNKDGQLGLGHTE--EVLRFTICKPLRGCPIRQVACGWDFTIMLT---EKGQVL 123
Query: 228 SVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
S G G+LG HG R P+ IE L + V VAAG HA G V WG
Sbjct: 124 SCGSNAFGQLGVPHGPRKCVV-PQAIE---CLREKVVCVAAGLRHALATTATGSVFQWGT 179
Query: 286 G-----RYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
G R C G + P V L + A+ G + +++ G++Y +G
Sbjct: 180 GLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRN 239
Query: 339 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN--AHTFALTES 396
+ L A+ + PQ + + +E+V + W+ H A TE+
Sbjct: 240 KHGQLASRAVF---------LPLPQRIEAHYFQDEKVTAV-------WSGWTHLVAKTET 283
Query: 397 GKLYAFGAGDKGQLGIELVNNQTER 421
GK++ +G D GQLG L + ++
Sbjct: 284 GKVFTWGRADYGQLGRRLEPPEAQK 308
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 122/307 (39%), Gaps = 42/307 (13%)
Query: 30 VLRFLLAG--EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWR 85
VLRF + C R Q G +I +T KG V S GSN+ GQLG HG +
Sbjct: 89 VLRFTICKPLRGCPIR---QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGP-RKCVV 144
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-----VTSP 140
P+ I L+ +++ AAG + + G V+ +G G L P
Sbjct: 145 PQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEP 203
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLL 196
V L+N V A G+ +A L+ G +Y + +L P +E H
Sbjct: 204 SRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAH--- 260
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
++ V + +G+ +L+A + V++ G G+LG E + +EQ
Sbjct: 261 -YFQDEKVTAVWSGWTHLVA---KTETGKVFTWGRADYGQLGRRLEPPEAQ-KPVEQDSS 315
Query: 257 LNLQ---------------PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
L Q ++ G+ H V +D + C+WGW +G G G E
Sbjct: 316 LAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWT 374
Query: 302 PKVVQAL 308
P VQAL
Sbjct: 375 PTPVQAL 381
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 36/170 (21%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + + G V+S+G GQLGHGT E E PR + +LQG+ + + AAG ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCV 225
Query: 111 SDAGQVYAFGKDSFGE--------AEYGVQGTKLVTS----------------------- 139
S+ G +Y +G + G+ AE G + T
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFI 285
Query: 140 -----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
P L++ V+ + G+ TAV++R G +YT+ WG +LGH
Sbjct: 286 AVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 49/258 (18%)
Query: 86 PRP--IRSLQG-IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
PRP R L +R Q GA +L+ AGQV+++G G+ +G +L P+L
Sbjct: 146 PRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRL 203
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
+E+L+ + + + A G + + +S G +Y + W +L +
Sbjct: 204 LEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLA-------------------L 244
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGL---GGKLGHGSRTDEKHPRLIEQFQ---- 255
P +A G V GL G ++ R ++ P Q
Sbjct: 245 PTRNLAE------------DGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPA 292
Query: 256 LLNL----QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND- 310
LL+L V V+ G+ H AVV + G + TWGWG+YG LGH + P+ V+ D
Sbjct: 293 LLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDK 352
Query: 311 -VKAIHVATGDYTTFVVS 327
++ V G + T+V +
Sbjct: 353 QLQVKAVTCGPWNTYVYA 370
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA HA ++ G+V +WG GR+G LGHG E E P++++AL + VA G + + V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCV 225
Query: 327 SEDGDVYSFGCGESASLG---HNAIADGQG-NRHANVL----------------TPQLVT 366
SE GD+Y +G ES L N DG+ R A L P
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFI 285
Query: 367 SLK--------QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
+++ + V++S + HT +T +G+LY +G G GQLG E +
Sbjct: 286 AVQPFPALLDLPLGSDAVKVSCGSR-----HTAVVTRTGELYTWGWGKYGQLGHE---DT 337
Query: 419 TERGNPERVD 428
T P RV+
Sbjct: 338 TSLDWPRRVE 347
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 57/232 (24%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+++ A + LL A Q V+S G G G+LGHG+ E PRL+E Q L + V
Sbjct: 163 LELGAEHALLLDAAGQ-----VFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTM--AEV 215
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN----EECESVPKVVQALND----VK---- 312
AAG WH+ V + G + WGW G L E+ E+V + LN+ VK
Sbjct: 216 AAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGR 275
Query: 313 --------------------------AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
A+ V+ G T VV+ G++Y++G G+ LGH
Sbjct: 276 VEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Query: 347 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 398
R ++ +Q+ WN + +A+ E GK
Sbjct: 336 DTTSLDWPRRVEYFV-----------DKQLQVKAVTCGPWNTYVYAV-EKGK 375
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 369
+++A + G ++ G V+S+G G LGH + L P+L+ +L+
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLE--------AELEPRLLEALQ 208
Query: 370 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
+++ H+ ++E+G +Y +G + GQL + N
Sbjct: 209 G-------LTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRN 248
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 166/408 (40%), Gaps = 83/408 (20%)
Query: 75 LGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG------- 125
LGH TT ++ R I +G++ +QA AG + +++ G+VY G + G
Sbjct: 163 LGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGV 222
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
E E V + +E K +V A G FTA L+ +G V +WGN
Sbjct: 223 EKEGSTDEFAKVKFEEDIE--KEGKIVMLAAGASFTAALTDQGSV--IAWGN-----LRN 273
Query: 186 EPNDVEPHPLLGTLENIPV----------VQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+V+ HPLL ++ PV V+IAAG +L+ L + + + G G G
Sbjct: 274 SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKG---CLLTFGDGEMG 330
Query: 236 KLGHGSRT---------DEKHPRLIEQFQLLN-------LQPVVVAAGAWHAAVVGQDGR 279
+LG SRT DE L+ + + + V A+G W V G+DG+
Sbjct: 331 QLGRSSRTKTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFW-TIVHGEDGK 389
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV-------ATGDYTTFVVSE---- 328
+G Y LG +E + V Q D + + V A G TFV E
Sbjct: 390 YYAFGLNNYAQLGIKVDEAD----VGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQH 445
Query: 329 ------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS--L 380
DG V++ G +LG +H T Q + + + ++V +S L
Sbjct: 446 VVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEI----EFDSKIVGVSAKL 501
Query: 381 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER-GNPERV 427
SI W +E G YA+G GQLG+ L + + PE +
Sbjct: 502 ATSIAW-------SEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEI 542
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
PS + + CG G LGH RT K PR ++ F+ L+P+ AG H+AV+ +G V
Sbjct: 147 PSIIGDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEV 206
Query: 281 CTWGWGRYGCL-GHGNEECESVPKV--VQALNDV----KAIHVATGDYTTFVVSEDGDVY 333
G G + G E+ S + V+ D+ K + +A G T +++ G V
Sbjct: 207 YMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVI 266
Query: 334 SFGCGESASLGHNAIADGQGNRHANVLTPQL----VTSLKQVNERVVQISLTNSIYWNAH 389
++G + + GN + L ++ V + Q ++V+I+ + H
Sbjct: 267 AWGN----------LRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGEN-----H 311
Query: 390 TFALTESGKLYAFGAGDKGQLG 411
L E G L FG G+ GQLG
Sbjct: 312 LVMLDEKGCLLTFGDGEMGQLG 333
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 113/316 (35%), Gaps = 74/316 (23%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
+R+ + AG H + + KG + +FG GQLG + + R + + G ++
Sbjct: 298 AKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVP 357
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G+ + KN+F F+
Sbjct: 358 -------LRFKHKGKFFDV-------------------------VAKNVFA-----SGFW 380
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDV---------------EPHPLLG---TLENI 202
T V +G+ Y F N A+LG + DV P G T NI
Sbjct: 381 TIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNI 440
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQ 260
VQ + +L S V+++G LG G+ T D++ L + Q +
Sbjct: 441 EGVQ----HVVILG-----SDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFD 491
Query: 261 PVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG----NEECESVPKVVQA--LNDVK 312
+V A A + +DG WG+ G LG G +E+ S P+ + + L+
Sbjct: 492 SKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYS 551
Query: 313 AIHVATGDYTTFVVSE 328
I + D T ++++
Sbjct: 552 IIGASISDQHTLIIAK 567
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G + LGHG++ + HP L+E F + + +H+ + Q G+V T G
Sbjct: 145 LYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGH 204
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+ G LGHG+E VP++V+ L VA T V++EDG VY+FG LG
Sbjct: 205 GQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLG 263
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREG 168
SD ++Y +G + +G Q +K P+LVE +++ Q + F + LS++G
Sbjct: 140 SDPTELYTWGDNVNFTLGHGTQQSK--HHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKG 197
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+VYT G RLGH E + P L+ L P Q+A + + L VY+
Sbjct: 198 QVYTCGHGQGGRLGHGDELTCLVPR-LVEGLRGHPCTQVAGAKDHTVVLT---EDGYVYT 253
Query: 229 VGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-- 285
G +LG + PR I+ + + VAAG +H + +D V T G
Sbjct: 254 FGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNG 312
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ G L N E+ S P+ V AL+ D+ V+ D T VSE GD+Y + C +
Sbjct: 313 GQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKK 372
Query: 340 SAS 342
AS
Sbjct: 373 LAS 375
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 110/248 (44%), Gaps = 18/248 (7%)
Query: 52 PGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTM 108
P H + TS +Y++G N + LGHGT + + P + G+ I Q ++
Sbjct: 132 PPHIVFKTSDPTELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSV 191
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+S GQVY G G +G + T LV P+LVE L+ Q A T VL+ +G
Sbjct: 192 FLSQKGQVYTCGHGQGGRLGHGDELTCLV--PRLVEGLRGHPCTQVAGAKDHTVVLTEDG 249
Query: 169 RVYTFSWGNDARLG-HHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPSGMAV 226
VYTF +LG PN P + T++ V+ +AAG + + + AV
Sbjct: 250 YVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLW----TKDAV 305
Query: 227 YSVGCGLGGKLGHGSRTD-EKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
Y+VG GG+LG+ + EK PR + ++ +V+A V + G +
Sbjct: 306 YTVGLN-GGQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDI-- 362
Query: 283 WGWGRYGC 290
+ Y C
Sbjct: 363 YLLSEYQC 370
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
TWG LGHG ++ + P++V+ + V + + + +S+ G VY+ G G+
Sbjct: 147 TWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQ 206
Query: 340 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 399
LGH L P+LV L+ Q++ HT LTE G +
Sbjct: 207 GGRLGHG--------DELTCLVPRLVEGLR--GHPCTQVAGAKD-----HTVVLTEDGYV 251
Query: 400 YAFGAGDKGQLGIE 413
Y FG QLGI+
Sbjct: 252 YTFGLNTFHQLGIQ 265
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 29 LVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWR 85
LV R + L G C +Q H++ +T G VY+FG N+ QLG
Sbjct: 219 LVPRLVEGLRGHPC-----TQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNV 273
Query: 86 PRPI--RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY--GVQGTKLVTSPQ 141
PR I ++++G ++ AAG T+L + VY G + G+ Y G K V+ P+
Sbjct: 274 PRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNG-GQLGYLQDPNGEKFVSCPR 331
Query: 142 LVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V +L K+I + + + T +S G +Y S
Sbjct: 332 QVSALHHKDINITLVSASDGATVCVSERGDIYLLS 366
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 61/331 (18%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWR-PRPI---------RSLQGIRIIQAAAGAGRTML---- 109
VYS+GS +G+LGHG E + P+ I R +I + +G ++
Sbjct: 69 VYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKITSGTTYSIFSGYD 128
Query: 110 -ISDAGQVYAFGKDSFGEAEYG------VQGTKLVTSPQL-VESLKNIFVVQAAIGNFFT 161
I D Y G + + G ++ +L+ SP L + +K + Q G +
Sbjct: 129 QIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQLISGTYHN 188
Query: 162 AVL-----------SREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLG-TLENIPVVQI 207
A + + + R WG N ++G E N V+ P L I + +I
Sbjct: 189 ACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGS-PEYNRVQYDPYNNKVLSEIGIKKI 247
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
+ G + +AL+ + +YS G +LG+G +E+ P+LI+ L + + + + G
Sbjct: 248 SMGATFTIALS---NDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECG 304
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK--------VVQALNDV------KA 313
+H + D ++ TWG + +C VP+ VQ L+ K
Sbjct: 305 FFHTVALTSDNKILTWGRNQ-------ESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKI 357
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
I + + +++++E+G++YS G + G
Sbjct: 358 IQIGASNLNSYILTENGNIYSIGSNDHGQCG 388
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDY 321
++ GA + DG++ ++G + LG+G+ E PK++ Q L D + I + G +
Sbjct: 247 ISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFF 306
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 381
T ++ D + ++G + + G+G+ NV L TS +++++QI +
Sbjct: 307 HTVALTSDNKILTWGRNQESQCFPVPEGTGKGS-FTNV--QYLDTSSLGDHDKIIQIGAS 363
Query: 382 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 416
N +++ LTE+G +Y+ G+ D GQ GIE N
Sbjct: 364 N-----LNSYILTENGNIYSIGSNDHGQCGIEKSN 393
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
+ ++ +G+++SGQ+G ++ P + L I I + + GA T+ +S+ G++Y+F
Sbjct: 207 RSLILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIGIKKISMGATFTIALSNDGKLYSF 266
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
G +F E G + P+L+++ L++ ++ G F T L+ + ++ T WG
Sbjct: 267 GSSTFNELGNGDMFNE--REPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILT--WG 321
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTM 108
G +IA+++ G +YSFGS++ +LG+G E P+ I + LQ II G T+
Sbjct: 250 GATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTV 309
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGT--------KLVTSPQLVESLKNIFVVQAAIGNFF 160
++ ++ +G++ + +GT + + + L + K ++Q N
Sbjct: 310 ALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDK---IIQIGASNLN 366
Query: 161 TAVLSREGRVYT 172
+ +L+ G +Y+
Sbjct: 367 SYILTENGNIYS 378
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 28/272 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGI--RIIQAAA 102
Q G HS+ +T + V+S G+NS GQ G E+E + +Q +++Q
Sbjct: 175 QVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVC 234
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFT 161
G ++ ++D G+VY+ G + G+ G+ + ++P +L L + VVQ A
Sbjct: 235 GQDHSLFLTDKGEVYSCGWGADGQT--GLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS +G V F WGN L + + T N+P +G + +AC
Sbjct: 293 LALSADGGV--FGWGNSEYLQLASVTDS--------TQVNVPRCLPFSGVGKVKQVACGG 342
Query: 222 SGMAVYS----VGCGLGGKLGHGSRTDEKH-PRLIEQ--FQLLNLQPVV----VAAGAWH 270
+G AV + V G LG G + E P +I F L P V + G H
Sbjct: 343 TGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSH 402
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
A + G + WG GCLG G E + P
Sbjct: 403 FAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 434
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 128/332 (38%), Gaps = 70/332 (21%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPND--------VEPHPL--- 195
+ AA G FT +LS + + T WG D++LG H D +EP P+
Sbjct: 106 ISSAACGYGFT-LLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 164
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQ 253
L + V+Q++ G + L L + V+S+G G+ G DE + + +
Sbjct: 165 LDRPQETKVLQVSCGRAHSLVLTDR---EGVFSMGNNSHGQCGRKVVEDEVYSESHKVHR 221
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVK 312
Q + Q V V G H+ + G V + GWG G G G+ S P K+ L V
Sbjct: 222 MQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVT 281
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD---------------------- 350
+ VAT +S DG V FG G S L ++ D
Sbjct: 282 VVQVATYGDCCLALSADGGV--FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVA 339
Query: 351 -----------------------GQGNRHANVLTPQLVT-SLKQVNERVVQISLTNSIYW 386
G+G + P+++ +L + E ++ ++
Sbjct: 340 CGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCG 399
Query: 387 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 418
+H ALT G+L+ +G +G LGI + +Q
Sbjct: 400 LSHFAALTNKGELFVWGKNIRGCLGIGRLEDQ 431
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,244,849
Number of Sequences: 539616
Number of extensions: 7235616
Number of successful extensions: 17757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 16102
Number of HSP's gapped (non-prelim): 606
length of query: 432
length of database: 191,569,459
effective HSP length: 120
effective length of query: 312
effective length of database: 126,815,539
effective search space: 39566448168
effective search space used: 39566448168
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)