Query 014029
Match_columns 432
No_of_seqs 130 out of 1226
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:12:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.7E-84 1.3E-88 654.8 45.2 422 9-432 4-438 (439)
2 2xr7_A Malonyltransferase; xen 100.0 1.9E-74 6.4E-79 586.6 32.4 414 13-431 2-447 (453)
3 2bgh_A Vinorine synthase; VS, 100.0 3.6E-73 1.2E-77 571.3 35.8 397 9-431 1-412 (421)
4 2e1v_A Acyl transferase; BAHD 100.0 1E-73 3.4E-78 581.2 30.8 413 11-431 5-447 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.7E-64 5.7E-69 513.3 34.2 394 31-430 4-441 (451)
6 1q9j_A PAPA5, polyketide synth 99.3 1.2E-09 4.2E-14 108.5 26.8 287 29-340 5-313 (422)
7 4hvm_A Tlmii; PSI-biology, mid 98.9 6.5E-08 2.2E-12 98.3 18.1 291 28-340 10-327 (493)
8 2jgp_A Tyrocidine synthetase 3 98.8 1.9E-06 6.6E-11 87.9 25.8 280 29-340 94-400 (520)
9 1l5a_A Amide synthase, VIBH; n 98.7 2.7E-07 9.2E-12 92.0 17.5 255 59-341 32-305 (436)
10 2xhg_A Tyrocidine synthetase A 98.7 3.7E-06 1.3E-10 84.4 25.9 293 29-342 15-337 (466)
11 3fot_A 15-O-acetyltransferase; 98.4 5.6E-05 1.9E-09 76.9 22.8 359 58-431 71-511 (519)
12 2vsq_A Surfactin synthetase su 98.3 2.9E-05 9.9E-10 88.1 21.3 257 59-340 46-327 (1304)
13 3cla_A Type III chloramphenico 74.0 2.8 9.5E-05 36.9 4.1 45 140-184 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 73.2 3 0.0001 36.8 4.1 44 140-183 171-216 (217)
15 1q23_A Chloramphenicol acetylt 72.6 3.1 0.00011 36.7 4.1 44 141-184 168-213 (219)
16 4hhu_A OR280; engineered prote 68.7 6.4 0.00022 30.5 4.5 53 39-97 76-130 (170)
17 1scz_A E2, dihydrolipoamide su 68.0 4.5 0.00015 36.0 4.1 30 156-185 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 67.9 4.5 0.00015 36.3 4.1 29 156-184 208-236 (243)
19 3rqc_A Probable lipoamide acyl 67.6 3.9 0.00013 36.2 3.6 30 156-185 187-216 (224)
20 3b8k_A PDCE2;, dihydrolipoylly 66.7 4 0.00014 36.5 3.6 29 156-184 204-232 (239)
21 2ii3_A Lipoamide acyltransfera 66.3 5 0.00017 36.5 4.1 29 156-184 224-252 (262)
22 2kl8_A OR15; structural genomi 64.7 14 0.00049 25.2 5.0 39 59-97 9-48 (85)
23 4hhu_A OR280; engineered prote 62.9 7 0.00024 30.2 3.7 45 47-97 4-49 (170)
24 3mae_A 2-oxoisovalerate dehydr 60.6 7.4 0.00025 35.2 4.1 30 156-185 210-239 (256)
25 3l60_A Branched-chain alpha-ke 59.6 7.9 0.00027 34.8 4.1 30 156-185 205-234 (250)
26 2xl1_A Arginine attenuator pep 41.5 22 0.00076 18.8 2.3 18 257-274 6-23 (26)
27 1x93_A Hypothetical protein HP 39.3 74 0.0025 20.3 5.4 24 232-255 2-25 (55)
28 3dva_I Dihydrolipoyllysine-res 36.3 7.5 0.00026 38.0 0.0 29 156-184 391-419 (428)
29 2an7_A Protein PARD; bacterial 28.0 97 0.0033 22.2 4.6 35 231-269 1-35 (83)
30 3qoq_A Alginate and motility r 26.9 1.5E+02 0.005 20.7 5.4 46 230-279 18-63 (69)
31 2k1o_A Putative; repressor, tr 26.8 1.4E+02 0.0049 19.8 5.6 25 230-254 14-38 (66)
32 1p94_A Plasmid partition prote 25.1 79 0.0027 22.5 3.8 41 229-273 32-72 (76)
33 1baz_A ARC repressor; transcri 23.3 1.6E+02 0.0054 19.1 6.4 41 231-275 7-47 (53)
34 1apy_B Aspartylglucosaminidase 21.2 1.8E+02 0.0063 23.3 5.7 47 60-106 76-127 (141)
35 2xt6_A 2-oxoglutarate decarbox 20.1 72 0.0025 35.1 4.1 30 156-185 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.7e-84 Score=654.76 Aligned_cols=422 Identities=34% Similarity=0.630 Sum_probs=366.1
Q ss_pred eeeEEEEecceEeeCCCCCCCCeeeCCcccccccc-ceeEEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecC
Q 014029 9 IELNVKQGEPTLVKPAEDTEKGLYFLSNLDQNIAV-IVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISS 87 (432)
Q Consensus 9 ~~~~v~~~~~~~v~P~~~~~~~~~~Ls~lD~~~~~-~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~ 87 (432)
++++|++.++++|+|+.|+|.+.++||+||+++.. |++.+|||+.++.+....+++||+||+++|.+||+|||||+.++
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~ 83 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDE 83 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCCCEECCCHHHHSCCTTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECT
T ss_pred CceEEEEeeeEEEeCCCCCCCCeecCChhHhCccccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCC
Confidence 35779999999999999999999999999999878 99999999965433345689999999999999999999999998
Q ss_pred CCcEEEEecCCCeEEEEEEcccchhhhCCCCCCChhhhcccccCCCCCCCcCCCCceEEEEeeeecCcEEEEEeeecccc
Q 014029 88 EGKLIINCTGEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMF 167 (432)
Q Consensus 88 ~G~l~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~ 167 (432)
+|+++|+|+++||.|++++++.+++|+.+.. |.. .+.+|+|..+...+..+.|++.+|||.|.|||++||+++||.++
T Consensus 84 ~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~-p~~-~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~ 161 (439)
T 4g22_A 84 DGRIEIECNGEGVLFVEAESDGVVDDFGDFA-PTL-ELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAA 161 (439)
T ss_dssp TSCEEEECCCCCEEEEEEEESSCGGGGTTCC-CCG-GGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTC
T ss_pred CCCEEEEECCCCCEEEEEEcCCcHHHhcCCC-CCH-HHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccC
Confidence 8999999999999999999999999997643 554 67788876555434467899999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHhcCCCCCCCCccCccccccCCCCCccCCccccccccccCCCcc---ccc-CcceEEEEEeCHHHH
Q 014029 168 DGIGAMEFVNAWAETARGLPLKIPPFLDRSILKARSPPKIEDLHQEFAEIEDKSGTSE---LYK-DEMLYRSFCFDSAKL 243 (432)
Q Consensus 168 Dg~~~~~fl~~wa~~~~g~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~l 243 (432)
||.|+.+|+++||++|||.+...+|++||++++.+++|.....|.+|...+....... ..+ .++..++|+|++++|
T Consensus 162 Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i 241 (439)
T 4g22_A 162 DGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQI 241 (439)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHH
Confidence 9999999999999999998777789999999988877766666777765443221110 112 568999999999999
Q ss_pred HHHHHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCcCCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccccchhc
Q 014029 244 EKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELT 323 (432)
Q Consensus 244 ~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~ 323 (432)
++||+.+.++....++|++|+|+|++|+|+++||+.++++.+.+.++||+|+|++||+|++||||++..+.+.++++||.
T Consensus 242 ~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~ 321 (439)
T 4g22_A 242 SALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLE 321 (439)
T ss_dssp HHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHH
T ss_pred HHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHh
Confidence 99999998764345799999999999999999998878889999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHHhcchHHHHHHhHHHHhhcCC-------CCC-CCcEEEeecCCCCCCcccccCCcccccccccCC
Q 014029 324 EKPLSFAVGQVQDAIKMVNDSYMRSAIDYFEVTRAR-------PSL-SSTLLITTWSRLSFHTTDFGWGEPVLSGPVALP 395 (432)
Q Consensus 324 ~~~l~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~vtsw~~~~~~~~DFg~G~P~~~~~~~~~ 395 (432)
+.+|+++|..||++|++++++++++.++|++..++. +.+ ..++++|||.++++|++|||||||+++++....
T Consensus 322 ~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~ 401 (439)
T 4g22_A 322 FKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIA 401 (439)
T ss_dssp HSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCC
T ss_pred hCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccC
Confidence 999999999999999999999999999999865331 111 468999999999999999999999999987666
Q ss_pred CCeEEEEeecCCCCCcEEEEEeCCHhhHHHHHHhhhC
Q 014029 396 EKEVSLFLSHGKERKSINVLLGLPASAMKIFQELMAL 432 (432)
Q Consensus 396 ~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~l~~~~~~ 432 (432)
.+|.++++|+++++||++|.|+|++++|++|+++|+.
T Consensus 402 ~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 402 YEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp STTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTC
T ss_pred CCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhcc
Confidence 7899999998778899999999999999999999863
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.9e-74 Score=586.56 Aligned_cols=414 Identities=21% Similarity=0.323 Sum_probs=337.0
Q ss_pred EEEecceEeeCCCC-CCCCeeeCCccccccc-c-ceeEEEEeeCCCC-C--CchhHHHHHHHHHhhhcccccCCcEEeec
Q 014029 13 VKQGEPTLVKPAED-TEKGLYFLSNLDQNIA-V-IVRTIYCFKSDEK-G--NEKAGEVIKNALEKVLVHYYPLAGRLTIS 86 (432)
Q Consensus 13 v~~~~~~~v~P~~~-~~~~~~~Ls~lD~~~~-~-~~~~~~~f~~~~~-~--~~~~~~~L~~sL~~~l~~~p~LaGrl~~~ 86 (432)
|+|.++++|+|+.+ ++.+.++||.||+++. . |++.+|||+.++. + ....+++||+||+++|++||+|||||+.+
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~ 81 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP 81 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence 78899999999987 4568899999999854 4 9999999997543 2 34578999999999999999999999988
Q ss_pred C--CCcEEEEec-CCCeEEEEEEcccchhhhCCCCCCChhhhcccccCCCCCCC---cCCCCceEEEEeeeecCcEEEEE
Q 014029 87 S--EGKLIINCT-GEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKN---ILEMPPLAAQVTRFKCGGFVLGL 160 (432)
Q Consensus 87 ~--~G~l~i~~~-~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~~---~~~~P~l~vqvt~f~~GG~~l~~ 160 (432)
+ +|+++|+|+ ++||.|++++++.+++++.....+....+..|+|..+.... ..+.|++.+|||.|.|||++||+
T Consensus 82 ~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~ 161 (453)
T 2xr7_A 82 QDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGF 161 (453)
T ss_dssp SSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEE
T ss_pred CCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEE
Confidence 6 899999999 59999999999999999965322233366778875443211 12289999999999999999999
Q ss_pred eeeccccchhhHHHHHHHHHHHhc-CC-C----CCCCCccCccccccCCCCCccCCccc-ccccccc-CCCcccccCcce
Q 014029 161 CMNHCMFDGIGAMEFVNAWAETAR-GL-P----LKIPPFLDRSILKARSPPKIEDLHQE-FAEIEDK-SGTSELYKDEML 232 (432)
Q Consensus 161 ~~~H~v~Dg~~~~~fl~~wa~~~~-g~-~----~~~~P~~dr~~l~~~~~p~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 232 (432)
++||.++||.|+.+|+++||++|| |. . +...|++||+.+.. ++.....+.+ +...+.. .......+..+.
T Consensus 162 ~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (453)
T 2xr7_A 162 TNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKD--PNGVGMSIWNEMKKYKHMMKMSDVVTPPDKV 239 (453)
T ss_dssp EECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCC--SSCHHHHTTTTGGGCTTTSCCSCCCCCCSCC
T ss_pred eeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccC--CCCcchHHHHhccccCCccccccccCCCCce
Confidence 999999999999999999999999 86 3 24568999987752 2222111111 1110111 000001134677
Q ss_pred EEEEEeCHHHHHHHHHHhhccCCC-CCCcHHHHHHHHHHHHHHhhhCc-----CCCCeEEEEEEeeCCCCCCCCCCCCcc
Q 014029 233 YRSFCFDSAKLEKIKMIAMEDEVL-DKCSTFEALSAFVWKARTKALKF-----LPHQQTKLLFAVDGRSKFNPPLPKGYF 306 (432)
Q Consensus 233 ~~~~~~~~~~l~~Lk~~~~~~~~~-~~~S~~d~l~A~lW~~~~~ar~~-----~~~~~~~l~~~vd~R~rl~p~lp~~Y~ 306 (432)
.++|+|++++|++||+.+.++... .++|++|+|+|++|+|+++||.. ++++.+.+.++||+|+|++||+|++||
T Consensus 240 ~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~ 319 (453)
T 2xr7_A 240 RGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYF 319 (453)
T ss_dssp CEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBC
T ss_pred EEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccc
Confidence 899999999999999999875432 57999999999999999999975 567899999999999999999999999
Q ss_pred cceeeeeccccccchhcc-CcHHHHHHHHHHHHHh--cchH-HHHHHhHHHHhhcCCCCCCCcEEEeecCCCCCCccccc
Q 014029 307 GNGIVLTNSICQAGELTE-KPLSFAVGQVQDAIKM--VNDS-YMRSAIDYFEVTRARPSLSSTLLITTWSRLSFHTTDFG 382 (432)
Q Consensus 307 GN~~~~~~~~~~~~~l~~-~~l~~~A~~Ir~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~vtsw~~~~~~~~DFg 382 (432)
||++..+.+.++++||.+ .+|+.+|..||+++.+ .+++ ++++ +|++..+... ...++.+|||.++++|++|||
T Consensus 320 GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~~-~~~~~~vssw~~~~~y~~DFG 396 (453)
T 2xr7_A 320 GNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKVD-AKRSLSVAGSPKLDLYAADFG 396 (453)
T ss_dssp SCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCSC-GGGEEEECSCSSCCGGGCCCS
T ss_pred cceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhhc-cCCcEEEeccccCCccccccC
Confidence 999999999999999984 8999999999999999 5777 8887 7776533321 135899999999999999999
Q ss_pred CCcccccccccCCCCe--EEEEeecCCCCCcEEEEEeCCHhhHHHHHHhhh
Q 014029 383 WGEPVLSGPVALPEKE--VSLFLSHGKERKSINVLLGLPASAMKIFQELMA 431 (432)
Q Consensus 383 ~G~P~~~~~~~~~~~g--~~~ilp~~~~~~g~ev~v~L~~~~m~~l~~~~~ 431 (432)
||+|.++++.....+| .++++|+++++||++|.|+|++++|++|+++|.
T Consensus 397 ~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~~~~ 447 (453)
T 2xr7_A 397 WGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAAMFT 447 (453)
T ss_dssp SCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHHHHH
T ss_pred CCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHHHHH
Confidence 9999999987655678 888888887889999999999999999999985
No 3
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.6e-73 Score=571.33 Aligned_cols=397 Identities=23% Similarity=0.421 Sum_probs=328.4
Q ss_pred eeeEEEEecceEeeCCCCCCC--CeeeCCcccccccc-ceeEEEEeeCCCC---CCchhHHHHHHHHHhhhcccccCCcE
Q 014029 9 IELNVKQGEPTLVKPAEDTEK--GLYFLSNLDQNIAV-IVRTIYCFKSDEK---GNEKAGEVIKNALEKVLVHYYPLAGR 82 (432)
Q Consensus 9 ~~~~v~~~~~~~v~P~~~~~~--~~~~Ls~lD~~~~~-~~~~~~~f~~~~~---~~~~~~~~L~~sL~~~l~~~p~LaGr 82 (432)
|.|+|++.++++|+|+.|+|. +.++||.||++.+. |++.+|||+.++. +...++++||+||+++|++||+||||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGR 80 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGR 80 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSE
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccc
Confidence 557799999999999998875 48999999998777 9999999997542 24468999999999999999999999
Q ss_pred EeecCCCcEEEEecCCCeEEEEEEcccchhhhCCCCCCChhhhcccccCCCCCCC----cCCCCceEEEEeeeecCcEEE
Q 014029 83 LTISSEGKLIINCTGEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKN----ILEMPPLAAQVTRFKCGGFVL 158 (432)
Q Consensus 83 l~~~~~G~l~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~~----~~~~P~l~vqvt~f~~GG~~l 158 (432)
|+. +++|+|+++||.|++++++.+++|+.+. .|....+..|+|..+ ..+ ..+.|++.+|||.|.|||++|
T Consensus 81 l~~----~~~i~c~~~Gv~fv~A~~d~~l~~~~~~-~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~l 154 (421)
T 2bgh_A 81 INV----NSSVDCNDSGVPFVEARVQAQLSQAIQN-VVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAI 154 (421)
T ss_dssp EET----TTEEECCCCCEEEEEEEESSCHHHHHSC-CSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEE
T ss_pred cCC----CcEEEEcCCceEEEEEEEcCCHHHHhcc-CCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEE
Confidence 962 5999999999999999999999998653 255446677776432 111 456899999999999999999
Q ss_pred EEeeeccccchhhHHHHHHHHHHHhcCCCCCCCCccCc-ccccc--CCCCCccCCccccccccccCCCcccccCcceEEE
Q 014029 159 GLCMNHCMFDGIGAMEFVNAWAETARGLPLKIPPFLDR-SILKA--RSPPKIEDLHQEFAEIEDKSGTSELYKDEMLYRS 235 (432)
Q Consensus 159 ~~~~~H~v~Dg~~~~~fl~~wa~~~~g~~~~~~P~~dr-~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (432)
|+++||.++||.|+.+|+++||++|||......|.+|| +.+.. +++|. +. . ..+.++..++
T Consensus 155 g~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~~-----------~~---~--~~~~~~~~~~ 218 (421)
T 2bgh_A 155 GVNLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTPS-----------PE---L--VPDENVVMKR 218 (421)
T ss_dssp EEEEETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCCC-----------CC---C--CCCSSEEEEE
T ss_pred EEEeeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCCC-----------Cc---c--CCccceEEEE
Confidence 99999999999999999999999999976446789999 65532 11111 00 0 0135688999
Q ss_pred EEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCcC--CCCeEEEEEEeeCCCCCCCCCCCCcccceeeee
Q 014029 236 FCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFL--PHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLT 313 (432)
Q Consensus 236 ~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~--~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~ 313 (432)
|+|++++|++||+.+.++....++|++|+|+|++|+|+++||... +++.+.+.++||+|+|++||+|++||||++..+
T Consensus 219 f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~ 298 (421)
T 2bgh_A 219 FVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLL 298 (421)
T ss_dssp EEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEE
T ss_pred EEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEE
Confidence 999999999999999876433579999999999999999998642 467899999999999999999999999999999
Q ss_pred ccccccchhccCcHHHHHHHHHHHHHhcchHHHHHHhHHHHhhcCCCCCCCcEEEeecCCCCCCcccccCCccccccccc
Q 014029 314 NSICQAGELTEKPLSFAVGQVQDAIKMVNDSYMRSAIDYFEVTRARPSLSSTLLITTWSRLSFHTTDFGWGEPVLSGPVA 393 (432)
Q Consensus 314 ~~~~~~~~l~~~~l~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vtsw~~~~~~~~DFg~G~P~~~~~~~ 393 (432)
.+.+++++ +.+|+++|..||+++.++++++++...++.+.....+ ....+++|||.++++|++|||||+|.++++..
T Consensus 299 ~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~ 375 (421)
T 2bgh_A 299 FAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELE-PQELLSFTSWCRLGFYDLDFGWGKPLSACTTT 375 (421)
T ss_dssp EEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSC-GGGEEEEEEETTSCGGGCCSSSCCCSEEECCC
T ss_pred EEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCeEEEeccccCCCcccccCCCccCeecccc
Confidence 88888775 7899999999999999999999988877765432211 13479999999999999999999999999877
Q ss_pred CCCCeEEEEeecCCCCCcEEEEEeCCHhhHHHHHHhhh
Q 014029 394 LPEKEVSLFLSHGKERKSINVLLGLPASAMKIFQELMA 431 (432)
Q Consensus 394 ~~~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~l~~~~~ 431 (432)
...+|.++++|++++ +|++|.|+|++++|++|++++.
T Consensus 376 ~~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~e~~ 412 (421)
T 2bgh_A 376 FPKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPVELL 412 (421)
T ss_dssp CCSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCHHHH
T ss_pred cCcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHHHHH
Confidence 556799999998754 5899999999999999998774
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1e-73 Score=581.20 Aligned_cols=413 Identities=20% Similarity=0.319 Sum_probs=330.0
Q ss_pred eEEEEecceEeeCCCC-CCCCeeeCCccccccc-c-ceeEEEEeeCCCC-C--CchhHHHHHHHHHhhhcccccCCcEEe
Q 014029 11 LNVKQGEPTLVKPAED-TEKGLYFLSNLDQNIA-V-IVRTIYCFKSDEK-G--NEKAGEVIKNALEKVLVHYYPLAGRLT 84 (432)
Q Consensus 11 ~~v~~~~~~~v~P~~~-~~~~~~~Ls~lD~~~~-~-~~~~~~~f~~~~~-~--~~~~~~~L~~sL~~~l~~~p~LaGrl~ 84 (432)
++|+|.++++|+|+.+ ++.+.++||.||+.+. . |++.+|||+.++. + ....+++||+||+++|++||+|||||+
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 84 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLV 84 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEE
T ss_pred ceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeee
Confidence 4699999999999987 4678999999999854 4 9999999997543 2 335689999999999999999999998
Q ss_pred -ec-CCCcEEEEec-CCCeEEEEEEcccchhhhCCCCCCChhhhcccccCCCCCC---CcCCCCceEEEEeeeecCcEEE
Q 014029 85 -IS-SEGKLIINCT-GEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAK---NILEMPPLAAQVTRFKCGGFVL 158 (432)
Q Consensus 85 -~~-~~G~l~i~~~-~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~---~~~~~P~l~vqvt~f~~GG~~l 158 (432)
.+ ++|+++|+|+ ++||.|++++++.+++++.....+....+..|+|..+... +..+.|++.+|||.|.|||++|
T Consensus 85 ~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~l 164 (454)
T 2e1v_A 85 VYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAI 164 (454)
T ss_dssp ECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEE
T ss_pred eccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEE
Confidence 65 5799999999 5999999999999999996432212235677887654321 1134599999999999999999
Q ss_pred EEeeeccccchhhHHHHHHHHHHHhc-CCC------CCCCCccCccccccCCCCCccCCcc-ccccccc---cCCCcccc
Q 014029 159 GLCMNHCMFDGIGAMEFVNAWAETAR-GLP------LKIPPFLDRSILKARSPPKIEDLHQ-EFAEIED---KSGTSELY 227 (432)
Q Consensus 159 ~~~~~H~v~Dg~~~~~fl~~wa~~~~-g~~------~~~~P~~dr~~l~~~~~p~~~~~~~-~~~~~~~---~~~~~~~~ 227 (432)
|+++||.++||.|+.+|+++||++|| |.. +...|.+|| .++ +|+ ....+. .|..... ........
T Consensus 165 g~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (454)
T 2e1v_A 165 GITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK--YPM-LDEAYLKRAKVESFNEDYVTQSLAG 240 (454)
T ss_dssp EEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH-HHHHHHHHTTCTTHHHHCCCCCCCC
T ss_pred EEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC--CCC-cchHHHHhhhccccccccCcccCCC
Confidence 99999999999999999999999999 863 145789999 764 222 111110 1100000 00000002
Q ss_pred cCcceEEEEEeCHHHHHHHHHHhhccCCC-CCCcHHHHHHHHHHHHHHhhhCcCCCCeEEEEEEeeCCCCCCCCCCCCcc
Q 014029 228 KDEMLYRSFCFDSAKLEKIKMIAMEDEVL-DKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYF 306 (432)
Q Consensus 228 ~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~-~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~ 306 (432)
+.....++|+|++++|++||+++.++... .++|++|+|+|++|+|+++|| +++.+.+.++||+|+|++||+|++||
T Consensus 241 ~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~vd~R~rl~pplP~~Y~ 317 (454)
T 2e1v_A 241 PSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARMKPPIPTAYF 317 (454)
T ss_dssp CCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEEECGGGSSSCCCTTBC
T ss_pred CCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEecchhccCCCCCcccc
Confidence 35678999999999999999999875432 579999999999999999999 57899999999999999999999999
Q ss_pred cceeeeeccccccchhcc-CcHHHHHHHHHHHHHhcch----HHHHH-HhHHHHhhcCCCCCCCcEEEeecCCCCCCccc
Q 014029 307 GNGIVLTNSICQAGELTE-KPLSFAVGQVQDAIKMVND----SYMRS-AIDYFEVTRARPSLSSTLLITTWSRLSFHTTD 380 (432)
Q Consensus 307 GN~~~~~~~~~~~~~l~~-~~l~~~A~~Ir~ai~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~vtsw~~~~~~~~D 380 (432)
||++..+.+.++++||.+ .+|+.+|..||++|.++++ +++++ ..+|++..+... ...++.+|||.++++|++|
T Consensus 318 GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vssw~~~~~y~~D 396 (454)
T 2e1v_A 318 GNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGM-PTTMTWVSGTPKLRFYDMD 396 (454)
T ss_dssp SCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCC-CSEEEEEECCTTSCGGGCC
T ss_pred cceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhc-CCceEEEecCCCCCccccc
Confidence 999999999999999984 8999999999999999874 44455 556665432211 1348999999999999999
Q ss_pred ccCCcccccccccCCCCeEEEEeecCCCCCcEEEEEeCCHhhHHHHHHhhh
Q 014029 381 FGWGEPVLSGPVALPEKEVSLFLSHGKERKSINVLLGLPASAMKIFQELMA 431 (432)
Q Consensus 381 Fg~G~P~~~~~~~~~~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~l~~~~~ 431 (432)
||||+|+++++.....+|.++++|+++++||++|.|+|++++|++|+++|.
T Consensus 397 FG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~~~~ 447 (454)
T 2e1v_A 397 FGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFD 447 (454)
T ss_dssp SSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHHHHH
T ss_pred ccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHHHHH
Confidence 999999999987655678999999888889999999999999999999885
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.7e-64 Score=513.32 Aligned_cols=394 Identities=18% Similarity=0.216 Sum_probs=311.0
Q ss_pred eeeCCcccccc--cc-ceeEEEEeeCCCC-CCchhHHHHHHHHHhhhcccccCCcEEeecC-----CCcEEEEecCCCeE
Q 014029 31 LYFLSNLDQNI--AV-IVRTIYCFKSDEK-GNEKAGEVIKNALEKVLVHYYPLAGRLTISS-----EGKLIINCTGEGAV 101 (432)
Q Consensus 31 ~~~Ls~lD~~~--~~-~~~~~~~f~~~~~-~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~-----~G~l~i~~~~~gv~ 101 (432)
.++||.+||+. +. |++.+|||+.++. +....+++||+||+++|++||+|||||+.++ +|+++|+|++.+..
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 46999999997 57 9999999996432 3456799999999999999999999999864 58999998777777
Q ss_pred EEEEEccc-----chhhhCCCCCCChhhhcc--cccC--CCCC---CCcCCCCceEEEEeeeecCcEEEEEeeeccccch
Q 014029 102 FVEAEANC-----VLEKIGDITKPDPETLGK--LVYD--IPGA---KNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDG 169 (432)
Q Consensus 102 f~~~~~~~-----s~~~l~~~~~p~~~~~~~--l~~~--~~~~---~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg 169 (432)
|++++++. +++++.....|.. .+.. +.|. .|.. ....+.|++.+||| |.|||++||+++||.++||
T Consensus 84 ~~va~~~~d~~~p~~~~l~~~~~p~~-~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~Dg 161 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMRKAGYPMA-MFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMDM 161 (451)
T ss_dssp EEEEECTTCTTSCBHHHHHHHTSCGG-GSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCCH
T ss_pred EEEEeCCCCCCCCCHHHHHHcCCChh-hcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccccH
Confidence 99888764 6777754334432 2221 2221 2211 12346899999999 7799999999999999999
Q ss_pred hhHHHHHHHHHHHhcCCCCC----CCCccCcccccc---CCCCCccCCccccccccccCCCcccccCcceEEEEEeCHHH
Q 014029 170 IGAMEFVNAWAETARGLPLK----IPPFLDRSILKA---RSPPKIEDLHQEFAEIEDKSGTSELYKDEMLYRSFCFDSAK 242 (432)
Q Consensus 170 ~~~~~fl~~wa~~~~g~~~~----~~P~~dr~~l~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (432)
.|+.+|+++||++|||.+.. ..|.+||+.+.. +.+|.....+.+|...+.... ......++..++|+|++++
T Consensus 162 ~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~f~~~~ 240 (451)
T 2rkv_A 162 VGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGD-AVLTPVSASWAFFTFSPKA 240 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC--------CCEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCC-CCCCCCCceEEEEEECHHH
Confidence 99999999999999997632 257889874432 223433333444432221100 0011346789999999999
Q ss_pred HHHHHHHhhccCC--CCCCcHHHHHHHHHHHHHHhhh-C-cCCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccc
Q 014029 243 LEKIKMIAMEDEV--LDKCSTFEALSAFVWKARTKAL-K-FLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQ 318 (432)
Q Consensus 243 l~~Lk~~~~~~~~--~~~~S~~d~l~A~lW~~~~~ar-~-~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~ 318 (432)
|++||+++.++.. ..++|++|+|+|++|+|+++|| . .++++.+.+.++||+|+|++ +|.+|+||++..+.+.++
T Consensus 241 i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~ 318 (451)
T 2rkv_A 241 MSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNST 318 (451)
T ss_dssp HHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEEE
T ss_pred HHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccCc
Confidence 9999999987642 3579999999999999999998 3 56788999999999999997 899999999999999989
Q ss_pred cchhccCcHHHHHHHHHHHHHhcchHH-HHHHhHHHHhhcCCC--------CCCCcEEEeecCCCCCCccccc--CCccc
Q 014029 319 AGELTEKPLSFAVGQVQDAIKMVNDSY-MRSAIDYFEVTRARP--------SLSSTLLITTWSRLSFHTTDFG--WGEPV 387 (432)
Q Consensus 319 ~~~l~~~~l~~~A~~Ir~ai~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~vtsw~~~~~~~~DFg--~G~P~ 387 (432)
++||.+.+|+++|..||+++.+++.++ +++.++|++..++.. ..+.++++|||+++++|++||| ||+|.
T Consensus 319 ~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~ 398 (451)
T 2rkv_A 319 IGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPE 398 (451)
T ss_dssp HHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSCS
T ss_pred HHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCCCCCce
Confidence 999999999999999999999998888 999999998754321 1145799999999999999998 79999
Q ss_pred cccccc-CCCCeEEEEeecCCCCCcEEEEEeCCHhhHHHHHHhh
Q 014029 388 LSGPVA-LPEKEVSLFLSHGKERKSINVLLGLPASAMKIFQELM 430 (432)
Q Consensus 388 ~~~~~~-~~~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~l~~~~ 430 (432)
+++.+. ...+|.++++|. +++||++|.|+|++++|++|++|-
T Consensus 399 ~v~~~~~~~~~g~~~~~p~-~~~ggi~v~v~L~~~~m~~f~~d~ 441 (451)
T 2rkv_A 399 TVRRPIFEPVESLMYFMPK-KPDGEFCAALSLRDEDMDRLKADK 441 (451)
T ss_dssp EEECCBCSCCTTEEEECCC-CTTSCEEEEEEEEHHHHHHHHHCH
T ss_pred EEEcCCccCCCCEEEEecC-CCCCCEEEEEEeCHHHHHHHhcCH
Confidence 998544 345789999985 457899999999999999999864
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.29 E-value=1.2e-09 Score=108.48 Aligned_cols=287 Identities=16% Similarity=0.148 Sum_probs=168.6
Q ss_pred CCeeeCCcccccccc-ceeEEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecCCCcEEEEecCCCeE-EEEEE
Q 014029 29 KGLYFLSNLDQNIAV-IVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCTGEGAV-FVEAE 106 (432)
Q Consensus 29 ~~~~~Ls~lD~~~~~-~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~l~i~~~~~gv~-f~~~~ 106 (432)
...+|||++++.+-. .....+.|++.. ..+.++|++++.+++...|.|-.+++...+|.+.+........ +...+
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g---~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~d 81 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRG---VIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVID 81 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEES---CCCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEEEC
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEec---CCCHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEEEE
Confidence 357899999876543 222333344332 5889999999999999999999999876655444433332222 22111
Q ss_pred cccchhhhCCCCCCChhhhcccccCCCCCCCcCCCCceEEEEeeeecCcEEEEEeeeccccchhhHHHHHHHHHHHhc--
Q 014029 107 ANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAWAETAR-- 184 (432)
Q Consensus 107 ~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~-- 184 (432)
+.... ....+.+. . ..-+ ...|++.+.+.. .+++..|.+.+||.++||.|+..|++.|.+.++
T Consensus 82 -------~~~~~--~~~~~~~~--~--~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~ 146 (422)
T 1q9j_A 82 -------GTAAT--NGSPSGNA--E--LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDA 146 (422)
T ss_dssp ---------------------C--C--CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCC--cchhhhcc--c--CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHh
Confidence 11000 00011110 0 1112 577999998877 677899999999999999999999999999986
Q ss_pred ---CCCCCCCC--ccCc--cccccCC-----CCCccCCcccccc--cc---ccCCC-cccccCcceEEEEEeCHHHHHHH
Q 014029 185 ---GLPLKIPP--FLDR--SILKARS-----PPKIEDLHQEFAE--IE---DKSGT-SELYKDEMLYRSFCFDSAKLEKI 246 (432)
Q Consensus 185 ---g~~~~~~P--~~dr--~~l~~~~-----~p~~~~~~~~~~~--~~---~~~~~-~~~~~~~~~~~~~~~~~~~l~~L 246 (432)
|.+...+| +.+- ....... .+........|.. .+ ..+.. ............+.++.+..++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l 226 (422)
T 1q9j_A 147 VTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDL 226 (422)
T ss_dssp HHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHHHH
T ss_pred hccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHHH
Confidence 33322222 2111 0110110 0000000112211 11 01100 00111234678889999999999
Q ss_pred HHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCcCCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccccchhccCc
Q 014029 247 KMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELTEKP 326 (432)
Q Consensus 247 k~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~ 326 (432)
++.|++. .+|.++++.|.+-..+.+-+. .......+..+++.|....|+++..-+.|.++++...+++. .+.+
T Consensus 227 ~~~a~~~----~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~--~~~~ 299 (422)
T 1q9j_A 227 MAFGREH----RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIG--PNTD 299 (422)
T ss_dssp HHHHTTT----TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCC--SSCC
T ss_pred HHHHHHh----CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCChhhhhhhheeeeeeeecc--CCCC
Confidence 9999876 489999999986666554322 23567889999999988765543222344444443333333 2557
Q ss_pred HHHHHHHHHHHHHh
Q 014029 327 LSFAVGQVQDAIKM 340 (432)
Q Consensus 327 l~~~A~~Ir~ai~~ 340 (432)
+.++++.+++.+.+
T Consensus 300 ~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 300 IVDLASDIVATLRA 313 (422)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888888876
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.86 E-value=6.5e-08 Score=98.28 Aligned_cols=291 Identities=12% Similarity=0.013 Sum_probs=165.6
Q ss_pred CCCeeeCCcccccc-------cc-ceeEEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecCCCcEEEEecCCC
Q 014029 28 EKGLYFLSNLDQNI-------AV-IVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCTGEG 99 (432)
Q Consensus 28 ~~~~~~Ls~lD~~~-------~~-~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~l~i~~~~~g 99 (432)
....+|||+.-+-+ +. .....+.|+++. ..+.++|++++.+++...|.|--++.... |.+. ......
T Consensus 10 ~~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g---~ld~~~L~~A~~~lv~rh~~LRt~f~~~~-~~~~-~v~~~~ 84 (493)
T 4hvm_A 10 RPGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSG---RIDDDRLAAAADEVLDAFPLLRVNFVDDD-GLWM-RTRENA 84 (493)
T ss_dssp --CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEES---SCCHHHHHHHHHHHHHHCGGGGEEEEESS-SEEE-EECSCC
T ss_pred CCCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeC---CCCHHHHHHHHHHHHHhchhceeEEEccC-CEEE-EecCCC
Confidence 35789999886532 11 233445555543 68899999999999999999988887644 5555 433322
Q ss_pred eEEEEEEcccchhhhCCCCCCCh-hhhcccccC-CCCCCCcCCCCceEEEEeeeecCcEEEEEeeeccccchhhHHHHHH
Q 014029 100 AVFVEAEANCVLEKIGDITKPDP-ETLGKLVYD-IPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVN 177 (432)
Q Consensus 100 v~f~~~~~~~s~~~l~~~~~p~~-~~~~~l~~~-~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~ 177 (432)
+.+.+.+.. . .+.. ..+...+-. ....-+....|++.+.+....++...|.+.+||.++||.|+..|++
T Consensus 85 ~~~~~~d~~-------~--~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~ 155 (493)
T 4hvm_A 85 DALVRSDLR-------G--HPDPQARCVELLRADRDRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLG 155 (493)
T ss_dssp CCEEEEECT-------T--SSSHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHH
T ss_pred CCceEEECC-------C--CCchHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHH
Confidence 444333221 1 0111 111111100 0001123456899888876667778999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCccCccccccC--CCCCcc-CCcccccc--ccccCC-C-cccccCcceEEEEEeCHHHHHHHHHHh
Q 014029 178 AWAETARGLPLKIPPFLDRSILKAR--SPPKIE-DLHQEFAE--IEDKSG-T-SELYKDEMLYRSFCFDSAKLEKIKMIA 250 (432)
Q Consensus 178 ~wa~~~~g~~~~~~P~~dr~~l~~~--~~p~~~-~~~~~~~~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~Lk~~~ 250 (432)
.+.+.+.|..+. .++.|-...... ...... .....|.. +...+. . ............+.++.+..++|++.|
T Consensus 156 ~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~~a 234 (493)
T 4hvm_A 156 AVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGPPETSRLRVPGSRWQALTEPG 234 (493)
T ss_dssp HHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------CCEEEEEEEEHHHHHHHHCC-
T ss_pred HHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEEcCHHHHHHHHHHH
Confidence 999999876533 222221100000 000000 00111211 111111 0 000112267788999999999999888
Q ss_pred hccCCCCCCc--HHHHHHHHHHHHHHhhh-Cc-------CCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccccc
Q 014029 251 MEDEVLDKCS--TFEALSAFVWKARTKAL-KF-------LPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAG 320 (432)
Q Consensus 251 ~~~~~~~~~S--~~d~l~A~lW~~~~~ar-~~-------~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~ 320 (432)
++. .+| .+.++.|.+-..+.+-+ +. .......+..++++|..- --.+.+|+++-.....+..+
T Consensus 235 ~~~----~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~ 307 (493)
T 4hvm_A 235 GPL----GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---QLGSVVGPLTDRVVFGVDLT 307 (493)
T ss_dssp ---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---TCCSBCSCCEEEEEEEEECT
T ss_pred HHc----CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---chhcCeEeeeceeEEEEecC
Confidence 876 488 99999988655544331 00 235678999999999652 23566777766655555444
Q ss_pred hhccCcHHHHHHHHHHHHHh
Q 014029 321 ELTEKPLSFAVGQVQDAIKM 340 (432)
Q Consensus 321 ~l~~~~l~~~A~~Ir~ai~~ 340 (432)
...+.++.++++.+++.+.+
T Consensus 308 ~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 308 GLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp TCSSCBHHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHH
Confidence 22256888888888888777
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.78 E-value=1.9e-06 Score=87.93 Aligned_cols=280 Identities=13% Similarity=0.103 Sum_probs=166.3
Q ss_pred CCeeeCCcccccc-------c--c--ceeEEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecCCCcEEEEe-c
Q 014029 29 KGLYFLSNLDQNI-------A--V--IVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINC-T 96 (432)
Q Consensus 29 ~~~~~Ls~lD~~~-------~--~--~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~l~i~~-~ 96 (432)
...+|||+..+-+ + . ++...+-++. ..+.++|++++..++...|.|--++.... |.+.... .
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g-----~ld~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~ 167 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEG-----KLERTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIHE 167 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEE-----CCCHHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECC-----CCCHHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEECC
Confidence 4678999875421 1 1 3444455542 68899999999999999999988887643 5443222 2
Q ss_pred CCCeEEEEEEcccchhhhCCCCCCChhhhcccccCCCCCCCcCCCCceEEEEeeeecCcEEEEEeeeccccchhhHHHHH
Q 014029 97 GEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFV 176 (432)
Q Consensus 97 ~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl 176 (432)
...+.+...+. +-+++. ...... ..+ -+....|++.+.+....++...|.+.+||.++||.|+..|+
T Consensus 168 ~~~~~~~~~~~--~~~~~~--------~~~~~~-~~~--fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~ 234 (520)
T 2jgp_A 168 DVPFALAYSEV--TEEEAR--------ELVSSL-VQP--FDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILL 234 (520)
T ss_dssp CCCCCCEEEEC--CHHHHH--------HHHHHT-CCC--CCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHH
T ss_pred CCCCceEEEeC--CHHHHH--------HHHHHh-cCC--CCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHH
Confidence 22222222111 101110 011100 001 12245789988887666778999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCC--ccCccc-ccc-CCCCCccCCcccccc--ccc------cCCCcc---cccCcceEEEEEeCHH
Q 014029 177 NAWAETARGLPLKIPP--FLDRSI-LKA-RSPPKIEDLHQEFAE--IED------KSGTSE---LYKDEMLYRSFCFDSA 241 (432)
Q Consensus 177 ~~wa~~~~g~~~~~~P--~~dr~~-l~~-~~~p~~~~~~~~~~~--~~~------~~~~~~---~~~~~~~~~~~~~~~~ 241 (432)
+.+.+.+++......| +.|-.. ... ...+... ....|.. +.. .+.... ..........+.++.+
T Consensus 235 ~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~-~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 313 (520)
T 2jgp_A 235 AEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFH-KQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKA 313 (520)
T ss_dssp HHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHH-HHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHH
T ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhH-HHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHH
Confidence 9999999986421112 111000 000 0000000 0011110 000 010000 0112345678899999
Q ss_pred HHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCcCCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccccch
Q 014029 242 KLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGE 321 (432)
Q Consensus 242 ~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~ 321 (432)
..++|++.|++.+ +|.+.++.|.+-..+.+-- ......+..++++|..- --.+.+|+++-..........
T Consensus 314 ~~~~l~~~a~~~~----~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~ 383 (520)
T 2jgp_A 314 LTEGLHQLAQATG----TTLYMVLLAAYNVLLAKYA---GQEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQR 383 (520)
T ss_dssp HHHHHHHHHHHHT----CCHHHHHHHHHHHHHHHHH---TCSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCT
T ss_pred HHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhc---CCCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCC
Confidence 9999999998764 8999999987555544432 24678999999999652 224566776665555544332
Q ss_pred hccCcHHHHHHHHHHHHHh
Q 014029 322 LTEKPLSFAVGQVQDAIKM 340 (432)
Q Consensus 322 l~~~~l~~~A~~Ir~ai~~ 340 (432)
+.++.++++.+++.+.+
T Consensus 384 --~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 384 --EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp --TSBHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHH
Confidence 56889999999888876
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.74 E-value=2.7e-07 Score=91.95 Aligned_cols=255 Identities=14% Similarity=0.095 Sum_probs=150.6
Q ss_pred chhHHHHHHHHHhhhcccccCCcEEeecCCCcEEEEecCCCeEEEEEEcccchhhhCCCCCCCh-hhhcccccC-CCCCC
Q 014029 59 EKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCTGEGAVFVEAEANCVLEKIGDITKPDP-ETLGKLVYD-IPGAK 136 (432)
Q Consensus 59 ~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~l~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~~-~~~~~l~~~-~~~~~ 136 (432)
..+.++|++++..++...|.|--++... +| .+.-. ..+.+... ++.. .+.. ......+-. ....-
T Consensus 32 ~ld~~~L~~A~~~lv~rh~~LRt~f~~~-~~--~v~~~-~~~~~~~~-------d~~~--~~~~~~~~~~~~~~~~~~~f 98 (436)
T 1l5a_A 32 PLDTTLLLRALHLTVSEIDLFRARFSAQ-GE--LYWHP-FSPPIDYQ-------DLSI--HLEAEPLAWRQIEQDLQRSS 98 (436)
T ss_dssp SCCHHHHHHHHHHHHHTCGGGGEEECTT-CC--EEECS-SCCCCEEE-------ECTT--CTTHHHHHHHHHHHHHTSCC
T ss_pred CCCHHHHHHHHHHHHHHhheeEEEEEec-CC--eECCC-cCCCccEE-------eCCC--CCCHHHHHHHHHHHHhcCCC
Confidence 6889999999999999999998877643 34 32222 11222221 1111 0111 011111000 00011
Q ss_pred CcCCCCceEEEEeeeecCcEEEEEeeeccccchhhHHHHHHHHHHHhc----CCCCCCCC-ccCcccccc----CCCCCc
Q 014029 137 NILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAWAETAR----GLPLKIPP-FLDRSILKA----RSPPKI 207 (432)
Q Consensus 137 ~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~----g~~~~~~P-~~dr~~l~~----~~~p~~ 207 (432)
+....|++.+.+....++...|.+.+||.++||.|+..|++.+.+.+. |.++..++ .+. +.+.. ......
T Consensus 99 dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~ 177 (436)
T 1l5a_A 99 TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQ-SYLEEEAAYLTSHRY 177 (436)
T ss_dssp CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHH-HHHHHHHHHHTSHHH
T ss_pred CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHH-HHHHHHHHhhccHhH
Confidence 234668998888766677899999999999999999999999999987 54432211 110 00000 000000
Q ss_pred cCCcccccc-----ccc---cCCCcccccCcceEEEEEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCc
Q 014029 208 EDLHQEFAE-----IED---KSGTSELYKDEMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKF 279 (432)
Q Consensus 208 ~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~ 279 (432)
.....|.. .+. .+..............+.++.+..++|++.|+..+ +|.+.++.|.+-..+.+-
T Consensus 178 -~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~----~t~~~~l~aa~~~~L~~~--- 249 (436)
T 1l5a_A 178 -WQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQ----IGWPDALVALCALYLESA--- 249 (436)
T ss_dssp -HHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHHH---
T ss_pred -HHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHHh---
Confidence 00111111 010 11101011123457888999999999999998764 899999998755444333
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccccchhccCcHHHHHHHHHHHHHhc
Q 014029 280 LPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELTEKPLSFAVGQVQDAIKMV 341 (432)
Q Consensus 280 ~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~Ir~ai~~~ 341 (432)
.. ....+..++++|..- --.+-+|+++-.......... +.++.++++.+++.+.+.
T Consensus 250 ~g-~dv~ig~~~~~R~~~---~~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 250 EP-DAPWLWLPFMNRWGS---VAANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp ST-TCCEEEEEECCCTTS---GGGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHHH
T ss_pred hC-CceEEeeecccCCCh---HHhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHHH
Confidence 23 678899999999651 224556666655544444332 568999999999888773
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.73 E-value=3.7e-06 Score=84.41 Aligned_cols=293 Identities=13% Similarity=0.064 Sum_probs=166.3
Q ss_pred CCeeeCCcccccc-----cc--ceeEEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecCCCcEEEEec--CCC
Q 014029 29 KGLYFLSNLDQNI-----AV--IVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCT--GEG 99 (432)
Q Consensus 29 ~~~~~Ls~lD~~~-----~~--~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~l~i~~~--~~g 99 (432)
...+|||+..+++ +. .....+.|+... ..+.++|+++|..++...|.|--++....++...+... ...
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g---~ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~ 91 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE---GFDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQL 91 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT---CCCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSCC
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC---CCCHHHHHHHHHHHHHhChHhheEEecCCCceeeecccccccc
Confidence 4678888876522 11 234445566544 68899999999999999999988887543222333222 122
Q ss_pred eEEEEEEcccchhhhCCCCCCChhhhcccccCCCCCCCcCCCCceEEEEeeeecCcEEEEEeeeccccchhhHHHHHHHH
Q 014029 100 AVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAW 179 (432)
Q Consensus 100 v~f~~~~~~~s~~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~w 179 (432)
+.+.+.+.. ..... ......+.-.....-+....|++.+.+....++. .|.+.+||.++||.|+..|++.+
T Consensus 92 ~~~~~~d~~-------~~~~~-~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~-~l~l~~HH~i~Dg~S~~~l~~el 162 (466)
T 2xhg_A 92 YDFFSYNLT-------AQPDV-QQAIEAETQRLHSSMNLQEGPLVKVALFQTLHGD-HLFLAIHHLVVDGISWRILFEDL 162 (466)
T ss_dssp CEEEEEECT-------TCSCH-HHHHHHHHHHHHTTCCTTTCCCEEEEEEEETTEE-EEEEEEEGGGCCHHHHHHHHHHH
T ss_pred ceeEEEecC-------CcccH-HHHHHHHHHHHHhccCCCCCCeEEEEEEEcCCCC-EEEEEeeeeeechhhHHHHHHHH
Confidence 333332211 10000 0011100000000112346689988887665544 47799999999999999999999
Q ss_pred HHHhc----CCCCCCCCc-cC-cccc---cc-CCCCCccCCcccccc-----cc--ccCCCc---ccccCcceEEEEEeC
Q 014029 180 AETAR----GLPLKIPPF-LD-RSIL---KA-RSPPKIEDLHQEFAE-----IE--DKSGTS---ELYKDEMLYRSFCFD 239 (432)
Q Consensus 180 a~~~~----g~~~~~~P~-~d-r~~l---~~-~~~p~~~~~~~~~~~-----~~--~~~~~~---~~~~~~~~~~~~~~~ 239 (432)
.+.+. |.++..+|. .. ++.. .. ...+... ....|.. .+ ..+... ...........+.++
T Consensus 163 ~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~-~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~ 241 (466)
T 2xhg_A 163 ATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLL-SEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRIRLH 241 (466)
T ss_dssp HHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHH-TTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEECC
T ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccch-hhhHHHHHhhccCCcccCCccccccccccccceEEEEEcC
Confidence 98875 443322221 00 0100 00 0000000 0111110 01 111100 001123567888999
Q ss_pred HHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCcCCCCeEEEEEEeeCCCCCCC-CCCCCcccceeeeeccccc
Q 014029 240 SAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNP-PLPKGYFGNGIVLTNSICQ 318 (432)
Q Consensus 240 ~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p-~lp~~Y~GN~~~~~~~~~~ 318 (432)
.+..++|++.+.... .+|.++++.|.+-..+.+-- ......+..++++|....+ +--.+-+|+++........
T Consensus 242 ~~~~~~l~~~~~~~~---~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~ 315 (466)
T 2xhg_A 242 PEETEQLLKHANQAY---QTEINDLLLAALGLAFAEWS---KLAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVLLD 315 (466)
T ss_dssp HHHHHHHHHTGGGTT---TCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEEEE
T ss_pred HHHHHHHHHHhHHhh---CCCHHHHHHHHHHHHHHHHh---CCCceEEEecCCCCCccccCCCccccccceeeeccEEEe
Confidence 999999998875432 48999999988655554432 2467889999999976421 1224556666655544443
Q ss_pred cchhccCcHHHHHHHHHHHHHhcc
Q 014029 319 AGELTEKPLSFAVGQVQDAIKMVN 342 (432)
Q Consensus 319 ~~~l~~~~l~~~A~~Ir~ai~~~~ 342 (432)
.. .+.++.++++.|++.+..+.
T Consensus 316 ~~--~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 316 LK--QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CS--CCCSHHHHHHHHHHHHHHSG
T ss_pred cC--CCCCHHHHHHHHHHHHHhCc
Confidence 33 25689999999999988763
No 11
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.37 E-value=5.6e-05 Score=76.85 Aligned_cols=359 Identities=9% Similarity=0.016 Sum_probs=179.9
Q ss_pred CchhHHHHHHHHHhhhcccccCCcEEeecCCCcEE--EEec-CC-------CeEEEEEEcccchhhhCCCCCCChhhhcc
Q 014029 58 NEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLI--INCT-GE-------GAVFVEAEANCVLEKIGDITKPDPETLGK 127 (432)
Q Consensus 58 ~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~l~--i~~~-~~-------gv~f~~~~~~~s~~~l~~~~~p~~~~~~~ 127 (432)
.....++||.|+-.+--+.|-+|+++..+..+... +... ++ .-.|.+...+.+-+|+... .=.......
T Consensus 71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~-~~~~r~~~~ 149 (519)
T 3fot_A 71 LQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSE-MEEGRAAAN 149 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHH-HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHh-hhhhhcccc
Confidence 35678889999998888999999999977433333 2222 11 1134443333333343100 000000000
Q ss_pred cccCCCCCCCcCCCCceEEEEee--------eec-CcEEEEEeeeccccchhhHHHHHHHHHHHhcCCC----CCCCCcc
Q 014029 128 LVYDIPGAKNILEMPPLAAQVTR--------FKC-GGFVLGLCMNHCMFDGIGAMEFVNAWAETARGLP----LKIPPFL 194 (432)
Q Consensus 128 l~~~~~~~~~~~~~P~l~vqvt~--------f~~-GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g~~----~~~~P~~ 194 (432)
-.+ ..+...+.+-. +.. .-.-|.+.+||.++||.|...|++.+-+...... ....|.+
T Consensus 150 ~~~---------p~~~~~l~~v~~~~~~~~~~p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~ 220 (519)
T 3fot_A 150 DNT---------PSKSIELFLLSDVSTDSTPIPQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKI 220 (519)
T ss_dssp -CC---------CCCSCEEEEEESSSSTTSCCCTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCC
T ss_pred cCC---------CccceEEEEEeccccccccCCCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcC
Confidence 000 00111111100 111 0367888999999999999999999988775311 1112222
Q ss_pred C-c---ccccc-----CCCCCccCCcc-------cccc-c----cccCCCcccccCcceEEEEEeCHHHHHHHHHHhhcc
Q 014029 195 D-R---SILKA-----RSPPKIEDLHQ-------EFAE-I----EDKSGTSELYKDEMLYRSFCFDSAKLEKIKMIAMED 253 (432)
Q Consensus 195 d-r---~~l~~-----~~~p~~~~~~~-------~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~ 253 (432)
+ . ..|.. -..|. ....+ +|.. . +...-+...-+.......+.|++++.++|++.|++.
T Consensus 221 ~~g~E~~~L~P~~e~~~~~p~-~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~ 299 (519)
T 3fot_A 221 QWGQEIKNLSPPVVDSLKLDI-NTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTR 299 (519)
T ss_dssp CTTTTGGGSCCCTGGGBSSCG-GGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_pred CCCcccccCCcCHHHHhCCCC-CCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhc
Confidence 2 0 01110 00000 00000 1110 0 000000000112344578899999999999999987
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhC---cCCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeecccccc-c---------
Q 014029 254 EVLDKCSTFEALSAFVWKARTKALK---FLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQA-G--------- 320 (432)
Q Consensus 254 ~~~~~~S~~d~l~A~lW~~~~~ar~---~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~-~--------- 320 (432)
.+ +.+|.+.++.|.+-.++.+... ..........++||+|+.+.++.-.+|+|.+........+. .
T Consensus 300 ~~-~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v~~i~~~~~~~~~~ 378 (519)
T 3fot_A 300 LG-PGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRIENLKSITVSHKDE 378 (519)
T ss_dssp TC-TTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEECCGGGGCCCTTSC
T ss_pred CC-CCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeEecCccccccccchh
Confidence 21 2489999998877666554321 11234678899999999997655557888877655443321 1
Q ss_pred hhccC-cHHHHHHHHHHHHHh-cchHHHHHH--------hHHHHhhcCCCCCCCcEEEeecCCCCCC-ccccc---CCcc
Q 014029 321 ELTEK-PLSFAVGQVQDAIKM-VNDSYMRSA--------IDYFEVTRARPSLSSTLLITTWSRLSFH-TTDFG---WGEP 386 (432)
Q Consensus 321 ~l~~~-~l~~~A~~Ir~ai~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~vtsw~~~~~~-~~DFg---~G~P 386 (432)
++... .+.++|+.+++.... .+..+++.+ +.++......+.......+||.....=| .-.+| .|..
T Consensus 379 e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~lp~~y~~~~~~~~ 458 (519)
T 3fot_A 379 KELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEIKQTATGEN 458 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSCSEEEETTTTEE
T ss_pred hhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCCccCcccccCCccccccchhhccccCCCC
Confidence 11111 157778888777666 333333322 2233322111111346778888777622 33455 2222
Q ss_pred c-cccccc--CC-CC-eE-EEEeecCCCCCcEEEEEe-----CCHhhHHHHHHhhh
Q 014029 387 V-LSGPVA--LP-EK-EV-SLFLSHGKERKSINVLLG-----LPASAMKIFQELMA 431 (432)
Q Consensus 387 ~-~~~~~~--~~-~~-g~-~~ilp~~~~~~g~ev~v~-----L~~~~m~~l~~~~~ 431 (432)
. .+.... .. .. .. |.+. .. +|-+.+.++ .+++.|+.|++.+.
T Consensus 459 ~~~V~~~~~~~~~~~~~~~~~~~-Tf--~g~L~l~~~yn~a~~~~e~v~~~l~~v~ 511 (519)
T 3fot_A 459 VLSVESIDFVVNQSLPYLAIRLD-SW--RDASTLNIIYNDANYTEAEVQKYLQSIV 511 (519)
T ss_dssp EEEEEEEEEEECCCSSSCEEEEE-EE--TTEEEEEEEEETTTCCHHHHHHHHHHHH
T ss_pred ceEEEEEEEEccccCCceEEEEE-EE--CCEEEEEEEeccccCCHHHHHHHHHHHH
Confidence 1 111111 00 01 11 1111 11 344555554 46789999988764
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.31 E-value=2.9e-05 Score=88.08 Aligned_cols=257 Identities=11% Similarity=0.043 Sum_probs=153.5
Q ss_pred chhHHHHHHHHHhhhcccccCCcEEeecCCC-cEEEEecCCCeEEEEEEcccchhhhCCCCCCCh---hhhccccc---C
Q 014029 59 EKAGEVIKNALEKVLVHYYPLAGRLTISSEG-KLIINCTGEGAVFVEAEANCVLEKIGDITKPDP---ETLGKLVY---D 131 (432)
Q Consensus 59 ~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G-~l~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~~---~~~~~l~~---~ 131 (432)
..+.++|++++.+++...+.|--++....+| -.++......+.+.+.+ +.. .+.. ..+..+.- .
T Consensus 46 ~ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d-------~~~--~~~~~~~~~~~~~~~~~~~ 116 (1304)
T 2vsq_A 46 SLNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEID-------LTH--LTGSEQTAKINEYKEQDKI 116 (1304)
T ss_dssp CCCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEE-------CTT--SCHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEE-------CCC--CCchhHHHHHHHHHHHHhc
Confidence 6889999999999999999998888765444 34444443323333222 111 1110 01111100 0
Q ss_pred CCCCCCcCCCCceEEEEeeeecCcEEEEEeeeccccchhhHHHHHHHHHHHhcC----CCCCCCC---ccCcc-ccccCC
Q 014029 132 IPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAWAETARG----LPLKIPP---FLDRS-ILKARS 203 (432)
Q Consensus 132 ~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g----~~~~~~P---~~dr~-~l~~~~ 203 (432)
.+ -+....|++.+.+....++...|.+.+||.++||.|+..|++.+++.+++ .++..+| +-|-. .+...
T Consensus 117 ~~--fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~- 193 (1304)
T 2vsq_A 117 RG--FDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQ- 193 (1304)
T ss_dssp HC--CCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTS-
T ss_pred CC--CCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcc-
Confidence 01 12346699999987777778999999999999999999999999998863 3322222 11100 01100
Q ss_pred CCCccCCcccccc-----cc---ccCCCcc--cccCcceEEEEEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHH
Q 014029 204 PPKIEDLHQEFAE-----IE---DKSGTSE--LYKDEMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKAR 273 (432)
Q Consensus 204 ~p~~~~~~~~~~~-----~~---~~~~~~~--~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~ 273 (432)
... ....|.. .+ ..+.... ..........+.++++..++|++.|++.+ +|.+.++.|.+-..+
T Consensus 194 --~~~-~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~----~T~~~vllaa~a~~L 266 (1304)
T 2vsq_A 194 --DKQ-ASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQH----TTLSTALQAVWSVLI 266 (1304)
T ss_dssp --CHH-HHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTT----CCHHHHHHHHHHHHH
T ss_pred --hhh-HHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHH
Confidence 000 0111211 01 0110000 01123456778899999999999998774 899999988754444
Q ss_pred HhhhCcCCCCeEEEEEEeeCCCCCCCCCCCCcccceeeeeccccccchhccCcHHHHHHHHHHHHHh
Q 014029 274 TKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELTEKPLSFAVGQVQDAIKM 340 (432)
Q Consensus 274 ~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~Ir~ai~~ 340 (432)
.|-- ......+..+++.|....+.+ ++.+|+++-....+...+ .+.++.++.+.+++.+.+
T Consensus 267 ~r~t---g~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 267 SRYQ---QSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp HHHH---TCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHH
T ss_pred HHhc---CCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHH
Confidence 3332 346789999999996532212 345566555544444333 256899999999988877
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=74.05 E-value=2.8 Score=36.86 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=33.3
Q ss_pred CCCceEEEEeeeecCc--EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 014029 140 EMPPLAAQVTRFKCGG--FVLGLCMNHCMFDGIGAMEFVNAWAETAR 184 (432)
Q Consensus 140 ~~P~l~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~ 184 (432)
..|++.+--..-.+|. +-|++++||.++||.-...|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3577754322112333 68899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=73.22 E-value=3 Score=36.78 Aligned_cols=44 Identities=18% Similarity=0.266 Sum_probs=31.7
Q ss_pred CCCceEEEEeeeecCc--EEEEEeeeccccchhhHHHHHHHHHHHh
Q 014029 140 EMPPLAAQVTRFKCGG--FVLGLCMNHCMFDGIGAMEFVNAWAETA 183 (432)
Q Consensus 140 ~~P~l~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 183 (432)
..|++.+--..-.+|. +-|++++||.+.||.-...|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4577654221112333 6889999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=72.63 E-value=3.1 Score=36.70 Aligned_cols=44 Identities=14% Similarity=0.198 Sum_probs=32.9
Q ss_pred CCceEEEEeeeecCc--EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 014029 141 MPPLAAQVTRFKCGG--FVLGLCMNHCMFDGIGAMEFVNAWAETAR 184 (432)
Q Consensus 141 ~P~l~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~ 184 (432)
.|++.+--..-.+|. +-|++++||.+.||.-...|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765332222333 78899999999999999999999988763
No 16
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=68.70 E-value=6.4 Score=30.48 Aligned_cols=53 Identities=23% Similarity=0.317 Sum_probs=41.0
Q ss_pred ccccc-ceeEEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecCC-CcEEEEecC
Q 014029 39 QNIAV-IVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSE-GKLIINCTG 97 (432)
Q Consensus 39 ~~~~~-~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~-G~l~i~~~~ 97 (432)
+++.. .-.+...|+ .++.+.|+.+|...+.+-..+||.+...-+ ++++|.+++
T Consensus 76 ~imgsgsgvm~i~f~------gddlea~ekalkemirqarkfagtvtytl~gn~l~i~itg 130 (170)
T 4hhu_A 76 QIMGSGSGVMVIVFE------GDDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 130 (170)
T ss_dssp EEECTTCCEEEEEEE------CSCHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEES
T ss_pred EEEeCCceEEEEEEe------cCcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 44444 445567788 467899999999999999999999988655 468888774
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=68.00 E-value=4.5 Score=36.05 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=27.2
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETARG 185 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g 185 (432)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999988753
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=67.87 E-value=4.5 Score=36.30 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=26.8
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~ 184 (432)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998874
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=67.63 E-value=3.9 Score=36.18 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=27.4
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETARG 185 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g 185 (432)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998854
No 20
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=66.74 E-value=4 Score=36.49 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=27.0
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~ 184 (432)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 21
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=66.33 E-value=5 Score=36.45 Aligned_cols=29 Identities=21% Similarity=0.440 Sum_probs=26.7
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~ 184 (432)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998874
No 22
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=64.65 E-value=14 Score=25.16 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=32.9
Q ss_pred chhHHHHHHHHHhhhcccccCCcEEeecCCC-cEEEEecC
Q 014029 59 EKAGEVIKNALEKVLVHYYPLAGRLTISSEG-KLIINCTG 97 (432)
Q Consensus 59 ~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G-~l~i~~~~ 97 (432)
.++.+.++.+|...+.+-..+||.+...-+| .++|++++
T Consensus 9 gddleafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 9 GDDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp CSSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred CCcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 4678899999999999999999999887554 68888875
No 23
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=62.85 E-value=7 Score=30.24 Aligned_cols=45 Identities=24% Similarity=0.411 Sum_probs=36.7
Q ss_pred EEEEeeCCCCCCchhHHHHHHHHHhhhcccccCCcEEeecCC-CcEEEEecC
Q 014029 47 TIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSE-GKLIINCTG 97 (432)
Q Consensus 47 ~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~-G~l~i~~~~ 97 (432)
+...|+ .++.+.|+.+|...+.+-..+||.+...-+ ++++|.+++
T Consensus 4 m~i~f~------gddlea~ekalkemirqarkfagtvtytl~gn~l~i~itg 49 (170)
T 4hhu_A 4 MVIVFE------GDDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 49 (170)
T ss_dssp EEEEEE------CSCHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEES
T ss_pred EEEEEe------cCcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 456777 467899999999999999999999988654 468888774
No 24
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=60.65 E-value=7.4 Score=35.17 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=27.5
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETARG 185 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g 185 (432)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999864
No 25
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=59.58 E-value=7.9 Score=34.82 Aligned_cols=30 Identities=17% Similarity=0.333 Sum_probs=27.3
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETARG 185 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g 185 (432)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998754
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=41.45 E-value=22 Score=18.80 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=15.1
Q ss_pred CCCcHHHHHHHHHHHHHH
Q 014029 257 DKCSTFEALSAFVWKART 274 (432)
Q Consensus 257 ~~~S~~d~l~A~lW~~~~ 274 (432)
.-+|..|-++-++|+++.
T Consensus 6 svftsqdylsdhlwraln 23 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALN 23 (26)
T ss_pred ceeecHHHHHHHHHHHHh
Confidence 356889999999999874
No 27
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=39.30 E-value=74 Score=20.35 Aligned_cols=24 Identities=25% Similarity=0.349 Sum_probs=20.7
Q ss_pred eEEEEEeCHHHHHHHHHHhhccCC
Q 014029 232 LYRSFCFDSAKLEKIKMIAMEDEV 255 (432)
Q Consensus 232 ~~~~~~~~~~~l~~Lk~~~~~~~~ 255 (432)
....|+||+++.+.|++.+.++..
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~e 25 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEEE 25 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTTS
T ss_pred ceEEEEecHHHHHHHHHHHHHHHH
Confidence 357899999999999999988753
No 28
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=36.35 E-value=7.5 Score=38.02 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=0.0
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~ 184 (432)
+-|++++||.+.||.-...|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 45999999999999999999999988874
No 29
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=28.02 E-value=97 Score=22.23 Aligned_cols=35 Identities=9% Similarity=-0.021 Sum_probs=28.4
Q ss_pred ceEEEEEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHH
Q 014029 231 MLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFV 269 (432)
Q Consensus 231 ~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~l 269 (432)
+.+..|.+|.++=++||..+...+ +|.++.+.-++
T Consensus 1 MSrLTIrLpd~qH~rLKalAa~qG----~SInqli~E~l 35 (83)
T 2an7_A 1 MSRLTIDMTDQQHQSLKALAALQG----KTIKQYALERL 35 (83)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHT----SCHHHHHHHHT
T ss_pred CceeeEeCCHHHHHHHHHHHHHcC----CcHHHHHHHHc
Confidence 356789999999999999998875 67777776654
No 30
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=26.85 E-value=1.5e+02 Score=20.68 Aligned_cols=46 Identities=11% Similarity=-0.079 Sum_probs=37.0
Q ss_pred cceEEEEEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHhhhCc
Q 014029 230 EMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKF 279 (432)
Q Consensus 230 ~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~ 279 (432)
....-.+++|.+--++|+..|..++ .|.|.-|...|-..+..-..+
T Consensus 18 ~~~kf~LRlP~eL~~~L~~~A~~~g----rSlNaeIv~~Le~sl~~e~~l 63 (69)
T 3qoq_A 18 TADKFVVRLPEGMREQIAEVARSHH----RSMNSEIIARLEQSLLQEGAL 63 (69)
T ss_dssp TSEEEEEECCTTHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHHHTC-
T ss_pred cCCceEEECCHHHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHHcCCc
Confidence 3566789999999999999999885 799999998888877654433
No 31
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=26.76 E-value=1.4e+02 Score=19.77 Aligned_cols=25 Identities=12% Similarity=0.236 Sum_probs=21.6
Q ss_pred cceEEEEEeCHHHHHHHHHHhhccC
Q 014029 230 EMLYRSFCFDSAKLEKIKMIAMEDE 254 (432)
Q Consensus 230 ~~~~~~~~~~~~~l~~Lk~~~~~~~ 254 (432)
..-...|+||+++.+.|.+.|.++.
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE~ 38 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEEV 38 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred cceEEEEEecHHHHHHHHHHHHHHH
Confidence 3557899999999999999998875
No 32
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=25.10 E-value=79 Score=22.49 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=33.7
Q ss_pred CcceEEEEEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHH
Q 014029 229 DEMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKAR 273 (432)
Q Consensus 229 ~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~ 273 (432)
.......|+|+.+.-++||..|...+ +|..|+|..++=..+
T Consensus 32 ~~~~Rlti~i~~~lh~rlK~~Aa~~g----~Smsdvvreli~~~L 72 (76)
T 1p94_A 32 GKIKRVNVNFDEEKHTRFKAACARKG----TSITDVVNQLVDNWL 72 (76)
T ss_dssp TCEEECCEEEEHHHHHHHHHHHHHHT----CCHHHHHHHHHHHHH
T ss_pred cCceeEEEEcCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHH
Confidence 45677799999999999999998875 799999988764433
No 33
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=23.33 E-value=1.6e+02 Score=19.08 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=33.6
Q ss_pred ceEEEEEeCHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHh
Q 014029 231 MLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTK 275 (432)
Q Consensus 231 ~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ 275 (432)
.....+++|.+--++|+..|..++ .|.|.-+...|-.++-+
T Consensus 7 ~~~~~lRlp~eL~~~l~~~A~~~g----rS~N~~i~~~L~~~l~~ 47 (53)
T 1baz_A 7 MPQVNLRWPREVLDLVRKVAEENG----RSVNSEIYQRVMESFKK 47 (53)
T ss_dssp SCEEEEECCHHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHH
T ss_pred CCeeEEECCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHHhh
Confidence 456788999999999999999885 79998888877766543
No 34
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=21.18 E-value=1.8e+02 Score=23.31 Aligned_cols=47 Identities=9% Similarity=0.168 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHhhhcccc-cCCcEEeecCCCcEEEEecC----CCeEEEEEE
Q 014029 60 KAGEVIKNALEKVLVHYY-PLAGRLTISSEGKLIINCTG----EGAVFVEAE 106 (432)
Q Consensus 60 ~~~~~L~~sL~~~l~~~p-~LaGrl~~~~~G~l~i~~~~----~gv~f~~~~ 106 (432)
...+..++++.++..+++ ..+|-|..+.+|++.+.++. .+..|.+..
T Consensus 76 ~~~~A~~~~i~~~~~~~~~~~ggvIa~d~~G~~~~~~n~~~~~~~F~~~v~~ 127 (141)
T 1apy_B 76 DPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYN 127 (141)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCBTTBCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCEEEEeccCCCCCCeeEEEEc
Confidence 345667777777777877 56677888889999998886 345555544
No 35
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=20.10 E-value=72 Score=35.15 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=27.4
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 014029 156 FVLGLCMNHCMFDGIGAMEFVNAWAETARG 185 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~g 185 (432)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999988753
Done!