Citrus Sinensis ID: 014029

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430--
MKNTNGHAIELNVKQGEPTLVKPAEDTEKGLYFLSNLDQNIAVIVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCTGEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAWAETARGLPLKIPPFLDRSILKARSPPKIEDLHQEFAEIEDKSGTSELYKDEMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELTEKPLSFAVGQVQDAIKMVNDSYMRSAIDYFEVTRARPSLSSTLLITTWSRLSFHTTDFGWGEPVLSGPVALPEKEVSLFLSHGKERKSINVLLGLPASAMKIFQELMAL
ccccccccEEEEEEECccEECcccccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHHHcccccccccCEEEcccccEEEEEccccEEEEEEEEcccHHHcccccccccHHHccccccccccccccccccEEEEEEEEccccEEEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccCEEEEEECcHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEECcccccccccccccCCccccccCEEECHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccccccccccccCECccccccccEEEEEEcccccccEEEEEEccHHHHHHHHHHHcc
*************KQGEPTLVKPAEDTEKGLYFLSNLDQNIAVIVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCTGEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAWAETARGLPLKIPPFLDRSILKARSPPKIEDLHQ*************LYKDEMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELTEKPLSFAVGQVQDAIKMVNDSYMRSAIDYFEVTRARPSLSSTLLITTWSRLSFHTTDFGWGEPVLSGPVALPEKEVSLFLSHGKERKSINVLLGLPASAMKIFQELMAL
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MKNTNGHAIELNVKQGEPTLVKPAEDTEKGLYFLSNLDQNIAVIVRTIYCFKSDEKGNEKAGEVIKNALEKVLVHYYPLAGRLTISSEGKLIINCTGEGAVFVEAEANCVLEKIGDITKPDPETLGKLVYDIPGAKNILEMPPLAAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNAWAETARGLPLKIPPFLDRSILKARSPPKIEDLHQEFAEIEDKSGTSELYKDEMLYRSFCFDSAKLEKIKMIAMEDEVLDKCSTFEALSAFVWKARTKALKFLPHQQTKLLFAVDGRSKFNPPLPKGYFGNGIVLTNSICQAGELTEKPLSFAVGQVQDAIKMVNDSYMRSAIDYFEVTRARPSLSSTLLITTWSRLSFHTTDFGWGEPVLSGPVALPEKEVSLFLSHGKERKSINVLLGLPASAMKIFQELMAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Omega-hydroxypalmitate O-feruloyl transferase Involved in the synthesis of aromatics of the suberin polymer. Specifically affects the accumulation of the ferulate constituent of suberin in roots and seeds, but has no effect on the content of p-coumarate or sinapate.confidentQ94CD1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.3.-.-Acyltransferases.probable
2.3.1.-Transferring groups other than amino-acyl groups.probable
2.3.1.188Omega-hydroxypalmitate O-feruloyl transferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4G22, chain A
Confidence level:very confident
Coverage over the Query: 11-218,230-432
View the alignment between query and template
View the model in PyMOL