Query 014031
Match_columns 432
No_of_seqs 276 out of 2000
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 04:15:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 1.3E-59 4.5E-64 466.5 30.7 267 70-348 10-286 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 1.6E-50 5.5E-55 399.5 27.9 257 72-338 1-264 (292)
3 3e38_A Two-domain protein cont 100.0 4E-28 1.4E-32 244.8 15.7 163 70-325 16-198 (343)
4 2yxo_A Histidinol phosphatase; 99.9 1.1E-23 3.8E-28 202.4 12.4 180 74-326 1-229 (267)
5 1m65_A Hypothetical protein YC 99.9 1.3E-22 4.4E-27 192.8 13.1 175 72-326 1-197 (245)
6 2anu_A Hypothetical protein TM 99.9 1.4E-22 4.7E-27 195.4 12.7 164 70-336 17-215 (255)
7 3qy7_A Tyrosine-protein phosph 99.8 1.2E-18 4.3E-23 169.4 10.1 173 74-327 1-200 (262)
8 2wje_A CPS4B, tyrosine-protein 99.7 3.1E-18 1.1E-22 164.2 10.8 172 74-326 5-208 (247)
9 2w9m_A Polymerase X; SAXS, DNA 99.7 3.8E-17 1.3E-21 175.1 14.6 207 33-326 287-521 (578)
10 2hnh_A DNA polymerase III alph 99.7 8E-17 2.7E-21 179.9 17.0 84 73-159 5-90 (910)
11 3b0x_A DNA polymerase beta fam 99.6 3.3E-15 1.1E-19 160.0 15.9 173 72-326 336-534 (575)
12 2hpi_A DNA polymerase III alph 99.6 6.1E-15 2.1E-19 167.8 17.0 88 72-159 5-102 (1220)
13 3dcp_A Histidinol-phosphatase; 99.5 9.3E-14 3.2E-18 136.4 13.4 67 73-139 1-97 (283)
14 3f2b_A DNA-directed DNA polyme 99.4 2.1E-13 7.2E-18 153.2 10.8 101 71-173 113-225 (1041)
15 1v77_A PH1877P, hypothetical p 98.8 3.1E-08 1.1E-12 93.0 11.1 65 260-326 92-173 (212)
16 2y1h_A Putative deoxyribonucle 92.0 0.23 7.7E-06 46.7 6.3 61 72-133 4-64 (272)
17 1zzm_A Putative deoxyribonucle 88.3 0.88 3E-05 42.2 6.9 55 72-127 3-57 (259)
18 3rcm_A TATD family hydrolase; 85.3 0.57 2E-05 45.4 3.8 54 72-126 1-54 (287)
19 3gg7_A Uncharacterized metallo 84.6 0.42 1.4E-05 45.6 2.5 49 73-126 2-50 (254)
20 1xwy_A DNAse TATD, deoxyribonu 83.9 1.1 3.9E-05 41.5 5.1 54 73-127 4-57 (264)
21 2gzx_A Putative TATD related D 82.3 1.6 5.5E-05 40.2 5.5 54 73-127 1-54 (265)
22 1yix_A Deoxyribonuclease YCFH; 81.9 1 3.4E-05 41.7 3.8 54 73-127 2-58 (265)
23 2xio_A Putative deoxyribonucle 81.4 0.94 3.2E-05 43.5 3.6 55 72-127 1-65 (301)
24 3ipw_A Hydrolase TATD family p 74.9 2 7E-05 42.4 3.8 61 65-126 19-89 (325)
25 1j6o_A TATD-related deoxyribon 67.9 2.2 7.6E-05 40.0 2.2 56 71-127 10-65 (268)
26 2vc7_A Aryldialkylphosphatase; 64.0 5.7 0.00019 37.6 4.3 64 73-136 17-96 (314)
27 3cjp_A Predicted amidohydrolas 60.7 11 0.00037 34.9 5.5 36 72-112 2-37 (272)
28 3ngf_A AP endonuclease, family 58.1 16 0.00054 33.7 6.1 42 277-318 24-66 (269)
29 4gxw_A Adenosine deaminase; am 57.9 4.6 0.00016 40.7 2.5 29 72-103 29-57 (380)
30 3e2v_A 3'-5'-exonuclease; stru 57.8 10 0.00035 38.5 5.0 55 71-126 11-75 (401)
31 3iar_A Adenosine deaminase; pu 56.0 5.1 0.00017 40.1 2.4 29 72-103 6-34 (367)
32 3rys_A Adenosine deaminase 1; 55.1 5.4 0.00019 39.5 2.4 30 71-103 12-41 (343)
33 3pao_A Adenosine deaminase; st 54.9 5.5 0.00019 39.1 2.4 29 72-103 10-38 (326)
34 4e38_A Keto-hydroxyglutarate-a 52.2 37 0.0013 31.7 7.5 59 253-312 24-83 (232)
35 2ob3_A Parathion hydrolase; me 49.1 19 0.00066 34.8 5.3 60 73-132 16-92 (330)
36 3f4w_A Putative hexulose 6 pho 48.5 30 0.001 30.8 6.1 63 255-317 42-107 (211)
37 4i6k_A Amidohydrolase family p 47.6 16 0.00055 34.5 4.4 57 70-126 23-92 (294)
38 3kws_A Putative sugar isomeras 45.8 29 0.00098 32.1 5.8 40 278-317 40-81 (287)
39 3ngf_A AP endonuclease, family 45.2 55 0.0019 29.9 7.6 46 85-131 20-65 (269)
40 1vhc_A Putative KHG/KDPG aldol 44.6 67 0.0023 29.5 8.0 65 251-316 5-71 (224)
41 1k77_A EC1530, hypothetical pr 44.2 27 0.00092 31.6 5.2 41 278-318 17-58 (260)
42 3kws_A Putative sugar isomeras 43.1 31 0.0011 31.8 5.5 58 70-130 23-80 (287)
43 1bf6_A Phosphotriesterase homo 42.8 17 0.00057 33.6 3.6 62 73-134 6-80 (291)
44 3lmz_A Putative sugar isomeras 41.2 30 0.001 31.4 5.1 13 252-264 31-43 (257)
45 3h4u_A Amidohydrolase; signatu 41.2 44 0.0015 33.2 6.7 65 72-136 87-183 (479)
46 1914_A Signal recognition part 40.9 5 0.00017 37.8 -0.4 29 7-35 113-141 (232)
47 3jr2_A Hexulose-6-phosphate sy 40.8 22 0.00076 32.2 4.0 52 72-130 61-112 (218)
48 2q02_A Putative cytoplasmic pr 40.5 68 0.0023 28.9 7.4 15 251-265 19-33 (272)
49 3p6l_A Sugar phosphate isomera 39.3 40 0.0014 30.6 5.6 18 279-296 25-42 (262)
50 2pgf_A Adenosine deaminase; me 38.3 18 0.00061 35.8 3.2 29 72-103 44-72 (371)
51 2qul_A D-tagatose 3-epimerase; 38.1 63 0.0021 29.5 6.8 42 278-319 19-66 (290)
52 2g0w_A LMO2234 protein; putati 37.6 48 0.0016 30.9 6.0 14 251-264 36-49 (296)
53 3dx5_A Uncharacterized protein 37.5 26 0.00088 32.3 4.0 17 280-296 19-35 (286)
54 3vni_A Xylose isomerase domain 37.5 32 0.0011 31.7 4.7 41 278-318 19-65 (294)
55 3l23_A Sugar phosphate isomera 36.2 46 0.0016 31.3 5.6 41 278-318 31-77 (303)
56 1k77_A EC1530, hypothetical pr 36.1 40 0.0014 30.3 5.0 44 87-131 14-57 (260)
57 1i60_A IOLI protein; beta barr 35.5 59 0.002 29.4 6.1 15 251-265 14-28 (278)
58 4gbu_A NADPH dehydrogenase 1; 35.5 55 0.0019 32.7 6.3 22 253-274 98-121 (400)
59 3vni_A Xylose isomerase domain 35.1 44 0.0015 30.8 5.2 59 74-132 3-65 (294)
60 3lmz_A Putative sugar isomeras 34.5 61 0.0021 29.4 6.0 59 70-131 15-78 (257)
61 2zvr_A Uncharacterized protein 34.1 53 0.0018 30.3 5.6 42 279-320 44-89 (290)
62 3cny_A Inositol catabolism pro 34.0 34 0.0012 31.5 4.2 64 250-315 30-105 (301)
63 1u60_A Probable glutaminase YB 33.1 1.2E+02 0.0042 29.5 8.1 60 178-239 134-194 (310)
64 2ffi_A 2-pyrone-4,6-dicarboxyl 33.0 22 0.00074 33.0 2.6 56 72-127 12-80 (288)
65 3lnp_A Amidohydrolase family p 32.4 74 0.0025 31.4 6.7 62 72-137 86-177 (468)
66 2zds_A Putative DNA-binding pr 32.2 88 0.003 29.3 6.9 44 87-130 14-67 (340)
67 1wa3_A 2-keto-3-deoxy-6-phosph 32.0 64 0.0022 28.4 5.6 41 88-134 71-111 (205)
68 1i60_A IOLI protein; beta barr 32.0 90 0.0031 28.1 6.7 45 87-131 13-63 (278)
69 3ktc_A Xylose isomerase; putat 31.9 50 0.0017 31.4 5.1 40 278-317 35-78 (333)
70 2f6k_A Metal-dependent hydrola 31.5 30 0.001 32.2 3.4 36 73-108 2-55 (307)
71 3tva_A Xylose isomerase domain 31.5 63 0.0022 29.6 5.6 46 279-324 24-76 (290)
72 2q02_A Putative cytoplasmic pr 30.9 1E+02 0.0035 27.7 7.0 45 86-130 17-67 (272)
73 2z00_A Dihydroorotase; zinc bi 30.9 46 0.0016 32.2 4.8 60 73-132 50-117 (426)
74 2qul_A D-tagatose 3-epimerase; 30.8 59 0.002 29.7 5.3 45 88-132 17-65 (290)
75 3obe_A Sugar phosphate isomera 30.5 62 0.0021 30.5 5.5 17 280-296 40-56 (305)
76 3ur8_A Glucan endo-1,3-beta-D- 30.3 76 0.0026 31.1 6.1 47 85-136 12-58 (323)
77 3cqj_A L-ribulose-5-phosphate 29.9 64 0.0022 29.8 5.4 41 278-318 32-84 (295)
78 2zds_A Putative DNA-binding pr 29.7 94 0.0032 29.1 6.7 42 277-318 16-69 (340)
79 3inp_A D-ribulose-phosphate 3- 29.5 93 0.0032 29.1 6.4 59 255-314 75-135 (246)
80 3qc0_A Sugar isomerase; TIM ba 29.3 27 0.00091 31.7 2.6 15 251-265 18-32 (275)
81 1qwg_A PSL synthase;, (2R)-pho 29.3 70 0.0024 30.3 5.4 66 253-318 57-132 (251)
82 2wvv_A Alpha-L-fucosidase; alp 28.9 55 0.0019 33.4 5.1 54 83-138 73-147 (450)
83 4dyk_A Amidohydrolase; adenosi 28.8 65 0.0022 31.5 5.5 62 72-137 66-157 (451)
84 3jx9_A Putative phosphoheptose 28.8 25 0.00087 31.3 2.2 27 86-112 88-116 (170)
85 3guw_A Uncharacterized protein 28.6 28 0.00095 32.8 2.6 34 73-111 1-34 (261)
86 4f0r_A 5-methylthioadenosine/S 28.4 1E+02 0.0035 30.0 6.9 62 72-137 64-155 (447)
87 1wbh_A KHG/KDPG aldolase; lyas 28.4 98 0.0034 28.1 6.2 61 255-316 8-70 (214)
88 4dzh_A Amidohydrolase; adenosi 28.1 85 0.0029 31.2 6.3 62 72-137 73-164 (472)
89 1z41_A YQJM, probable NADH-dep 27.7 95 0.0032 30.1 6.4 22 253-274 85-108 (338)
90 4ab4_A Xenobiotic reductase B; 27.7 1E+02 0.0035 30.5 6.7 23 252-274 80-104 (362)
91 3cqj_A L-ribulose-5-phosphate 27.4 61 0.0021 29.9 4.8 45 86-130 28-82 (295)
92 2d59_A Hypothetical protein PH 27.1 83 0.0028 26.5 5.2 38 91-131 91-128 (144)
93 3gka_A N-ethylmaleimide reduct 27.0 1.1E+02 0.0037 30.3 6.7 22 253-274 89-112 (361)
94 2x7v_A Probable endonuclease 4 26.8 80 0.0027 28.7 5.4 39 277-315 13-62 (287)
95 3nqb_A Adenine deaminase 2; PS 26.6 20 0.00069 38.0 1.3 58 73-133 90-153 (608)
96 2ood_A BLR3880 protein; PSI-II 26.5 64 0.0022 32.3 5.0 42 94-136 124-166 (475)
97 3kts_A Glycerol uptake operon 26.4 1.5E+02 0.0052 26.8 7.0 61 250-316 40-104 (192)
98 2zxd_A Alpha-L-fucosidase, put 25.6 1.3E+02 0.0045 30.7 7.2 53 83-137 100-173 (455)
99 1yx1_A Hypothetical protein PA 25.6 77 0.0026 28.8 5.0 13 253-265 25-37 (264)
100 2yxb_A Coenzyme B12-dependent 25.5 1.1E+02 0.0039 26.3 5.8 49 85-133 53-106 (161)
101 3em5_A Beta-1,3-glucanase; gly 25.3 92 0.0032 30.4 5.7 46 85-135 11-56 (316)
102 4e38_A Keto-hydroxyglutarate-a 24.5 73 0.0025 29.7 4.6 41 90-135 95-135 (232)
103 3cny_A Inositol catabolism pro 24.3 1E+02 0.0035 28.1 5.7 46 86-133 29-74 (301)
104 1mxs_A KDPG aldolase; 2-keto-3 24.2 2.3E+02 0.0078 25.9 7.9 59 253-312 16-75 (225)
105 1icp_A OPR1, 12-oxophytodienoa 24.2 1.1E+02 0.0039 30.2 6.3 22 253-274 93-116 (376)
106 3fst_A 5,10-methylenetetrahydr 23.9 4.8E+02 0.016 24.9 12.7 63 251-314 130-203 (304)
107 2pby_A Glutaminase; secsg, rik 23.8 5E+02 0.017 25.1 13.1 58 178-237 133-192 (308)
108 3u0h_A Xylose isomerase domain 23.7 36 0.0012 31.0 2.3 56 73-131 4-64 (281)
109 1qtw_A Endonuclease IV; DNA re 23.4 1.1E+02 0.0037 27.8 5.6 40 276-315 12-62 (285)
110 3aam_A Endonuclease IV, endoiv 23.4 1.5E+02 0.0051 26.7 6.6 41 278-318 16-68 (270)
111 3ovp_A Ribulose-phosphate 3-ep 23.4 1.1E+02 0.0038 28.0 5.7 57 72-138 64-121 (228)
112 3u0h_A Xylose isomerase domain 23.3 42 0.0015 30.5 2.7 39 279-317 19-64 (281)
113 3aal_A Probable endonuclease 4 23.1 2E+02 0.0067 26.6 7.5 52 77-129 8-68 (303)
114 1vkf_A Glycerol uptake operon 22.9 1.4E+02 0.0049 26.9 6.1 60 251-316 43-105 (188)
115 3qxb_A Putative xylose isomera 22.9 1.2E+02 0.0039 28.4 5.8 38 281-318 40-88 (316)
116 3mpg_A Dihydroorotase, dhoase; 22.6 1.5E+02 0.0052 28.8 6.9 55 73-127 54-115 (428)
117 2eja_A URO-D, UPD, uroporphyri 22.5 76 0.0026 30.5 4.5 64 251-321 217-280 (338)
118 3lab_A Putative KDPG (2-keto-3 22.4 65 0.0022 29.8 3.7 44 86-134 70-119 (217)
119 3kru_A NADH:flavin oxidoreduct 22.2 1.1E+02 0.0039 29.9 5.7 23 252-274 82-106 (343)
120 2g0w_A LMO2234 protein; putati 22.1 1.1E+02 0.0038 28.3 5.5 45 88-132 36-86 (296)
121 3aal_A Probable endonuclease 4 22.0 2.2E+02 0.0074 26.3 7.5 41 278-318 20-72 (303)
122 1q6o_A Humps, 3-keto-L-gulonat 21.7 1.5E+02 0.0051 26.5 6.0 53 71-130 57-109 (216)
123 3tha_A Tryptophan synthase alp 21.5 70 0.0024 30.2 3.8 45 89-134 104-148 (252)
124 4do7_A Amidohydrolase 2; enzym 21.2 85 0.0029 29.5 4.5 56 72-127 3-74 (303)
125 2hk0_A D-psicose 3-epimerase; 21.1 68 0.0023 29.9 3.7 42 278-320 39-86 (309)
126 4h41_A Putative alpha-L-fucosi 20.8 1.8E+02 0.006 28.7 6.7 51 87-137 50-123 (340)
127 3l5a_A NADH/flavin oxidoreduct 20.8 1E+02 0.0035 31.1 5.1 23 252-274 105-129 (419)
128 4a3u_A NCR, NADH\:flavin oxido 20.7 99 0.0034 30.3 5.0 22 253-274 81-104 (358)
129 2qw5_A Xylose isomerase-like T 20.7 1.1E+02 0.0039 28.7 5.3 40 280-319 35-87 (335)
130 1xrt_A Dihydroorotase, dhoase; 20.5 1.3E+02 0.0045 29.8 5.9 59 73-131 101-167 (467)
131 3sho_A Transcriptional regulat 20.2 70 0.0024 27.4 3.4 24 89-112 102-125 (187)
132 3qxb_A Putative xylose isomera 20.1 1.8E+02 0.0062 27.0 6.6 43 89-131 36-87 (316)
133 2xij_A Methylmalonyl-COA mutas 20.0 1.3E+02 0.0046 32.9 6.2 48 86-133 640-692 (762)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=1.3e-59 Score=466.55 Aligned_cols=267 Identities=30% Similarity=0.471 Sum_probs=244.6
Q ss_pred CCceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEEEEEeecCCCCCCCC
Q 014031 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEE 149 (432)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~~~~~ 149 (432)
.|.|++|||+||.||||.++|++++++|++.|+++|||||||++.|+.++.+++++.||.+|+|+||++.+. +.
T Consensus 10 ~m~~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~~i~GvEis~~~~------~~ 83 (301)
T 3o0f_A 10 PPAQGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGLPLLLGTEITAVDE------DV 83 (301)
T ss_dssp CCSSSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCCEEEEEEEEEEET------TE
T ss_pred cccceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhcCCEEEEEEEEEEEeC------Cc
Confidence 567899999999999999999999999999999999999999999999999999999999999999999985 57
Q ss_pred cEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCC--CCCChHHHHHHHHHcCcc
Q 014031 150 PVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGHV 227 (432)
Q Consensus 150 ~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~--~~~gr~hia~aLv~~G~~ 227 (432)
.+|||||+++. ..+.|+++++.+|+.|.+|+++|+++|++. ++++||++.+.++.+ ..+||||||++|+++||+
T Consensus 84 ~vHiL~~~~d~---~~~~l~~~l~~~~~~R~~R~~~i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~ 159 (301)
T 3o0f_A 84 SVHMLAFQYDP---SNEHISSMFANTRAARLRRTKRMVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVY 159 (301)
T ss_dssp EEEEEEESCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSC
T ss_pred eEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCC
Confidence 89999999875 357899999999999999999999999999 999999998876532 469999999999999999
Q ss_pred ccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCC-----CcHHHHHHHHHcCccEEEEecCCC--
Q 014031 228 ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK-----NPAAIIRKLKDVGLHGLEVYRSDG-- 300 (432)
Q Consensus 228 ~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~-----~~~~li~~L~~~GldGIEv~~~~~-- 300 (432)
.+..++|++||++++|+||+..+++++|+|++|+++||++|||||+++. ...+++.+|++.|++||||+++.+
T Consensus 160 ~~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~ 239 (301)
T 3o0f_A 160 ETRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPP 239 (301)
T ss_dssp SSHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCH
T ss_pred CCHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCH
Confidence 9999999999999999999999999999999999999999999997653 346789999999999999999875
Q ss_pred -cHHHHHHHHHHcCCeeEeCCCCCCCCCCCCCCccccccChhhHHHhhh
Q 014031 301 -KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 348 (432)
Q Consensus 301 -~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 348 (432)
+.+.+.++|++++|++|||||||++.+ +..||.+.+|...++.+.+
T Consensus 240 ~~~~~~~~lA~~~gL~~tgGSD~Hg~~~--~~~lG~~~~~~~~~~~l~~ 286 (301)
T 3o0f_A 240 EQRERLLTIAARHDLLVTGGSDWHGKGK--PNGLGENLTDDDTVREILC 286 (301)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCBCGGGS--SCCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEEcCCCCCCC--CCcCCCcCCCHHHHHHHHH
Confidence 467889999999999999999999754 4689999999877776654
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=1.6e-50 Score=399.50 Aligned_cols=257 Identities=31% Similarity=0.464 Sum_probs=230.6
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEEEEEeecCCCCCCCCcE
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPV 151 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~~~~~~v 151 (432)
++++|||+||.+|||..+|++++++|++.|+++|||||||++.|+.++.+++++.||.+|+|+|+++.+. +..+
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~vi~G~Ei~~~~~------~~~~ 74 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRGIPFLNGVEVSVSWG------RHTV 74 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHTTCCEEEEEEEEEEET------TEEE
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHcCCEEEEEEEEEEecC------Ccee
Confidence 4679999999999999999999999999999999999999999999999988889999999999999874 4578
Q ss_pred EEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHHHHHHHHcCccccHH
Q 014031 152 HILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLK 231 (432)
Q Consensus 152 HiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~hia~aLv~~G~~~~~~ 231 (432)
|+|+|+.+. ..+.+.++++.+++.|.+|+++|+++|++.|++++++++..+++.+..+||||||++|++.||+.+..
T Consensus 75 hil~~~~d~---~~~~l~~~~~~~~~~r~~r~~~~~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~ 151 (292)
T 2yb1_A 75 HIVGLGIDP---AEPALAAGLKSIREGRLERARQMGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMR 151 (292)
T ss_dssp EEEEESCCT---TCHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHH
T ss_pred EEEEEecCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHH
Confidence 999999874 23579999999999999999999999999999999999988765555789999999999999999999
Q ss_pred HHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCCCc----HHHHHHHHHcCccEEEEecCCCc---HHH
Q 014031 232 QAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVYRSDGK---LVA 304 (432)
Q Consensus 232 ~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~~~----~~li~~L~~~GldGIEv~~~~~~---~~~ 304 (432)
++|++||+.++|+|++...++++++|+.|+.+||++|+|||+++... ..+++.|++.|++||||+++... ...
T Consensus 152 ~~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~ 231 (292)
T 2yb1_A 152 TVFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHK 231 (292)
T ss_dssp HHHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHH
T ss_pred HHHHHHHccCCceeccCCCCCHHHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999887632 45777888899999999998753 567
Q ss_pred HHHHHHHcCCeeEeCCCCCCCCCCCCCCcccccc
Q 014031 305 YTDLADTYGLLKLGGSDYHGRGGHGESELGSVKL 338 (432)
Q Consensus 305 ~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~ 338 (432)
+.++|++++|++|+|||||++.++ +..+|.+.+
T Consensus 232 ~~~~a~~~gl~~t~GSDaH~~~~~-~~~lG~~~~ 264 (292)
T 2yb1_A 232 FALHADRHGLYASSGSDFHAPGEG-GRDVGHTED 264 (292)
T ss_dssp HHHHHHHHTCEEEEECCBCSTTC----CTTCCCC
T ss_pred HHHHHHHcCCceEEeeCCCCcCCC-CCcCCCCCC
Confidence 889999999999999999998643 567998753
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.95 E-value=4e-28 Score=244.80 Aligned_cols=163 Identities=24% Similarity=0.300 Sum_probs=134.6
Q ss_pred CCceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecC------------CCCCCHHHHHHHHHhCCCeEeeEEEEE
Q 014031 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDH------------DTMSGIPEAIETARRFGMKIIPGVEIS 137 (432)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDH------------dt~~g~~~~~~~a~~~gi~vI~GiEis 137 (432)
..||++|||+||.||||..+|+++++.|++.|+++|||||| |++.++.++.+.+++.||.+|||+|++
T Consensus 16 ~~~~~~DlH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi~G~Ei~ 95 (343)
T 3e38_A 16 YTTLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIKGSEIT 95 (343)
T ss_dssp CEEEEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEECCEEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 34999999999999999999999999999999999999999 566788888888888899999999999
Q ss_pred EeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHH
Q 014031 138 TIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHV 217 (432)
Q Consensus 138 ~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~hi 217 (432)
+.+ ..+|+|+||.+...
T Consensus 96 ~~~--------~~gHiL~l~~~~~~------------------------------------------------------- 112 (343)
T 3e38_A 96 RAM--------APGHFNAIFLSDSN------------------------------------------------------- 112 (343)
T ss_dssp CST--------TTCEEEEESCSCSG-------------------------------------------------------
T ss_pred EcC--------CCcEEEEEeCCCCC-------------------------------------------------------
Confidence 863 46899999865200
Q ss_pred HHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC-------cHHHHHH-HHHcC
Q 014031 218 ARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN-------PAAIIRK-LKDVG 289 (432)
Q Consensus 218 a~aLv~~G~~~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~~-------~~~li~~-L~~~G 289 (432)
+....+++++++.+++.||++|+|||++... ... +++ +...+
T Consensus 113 -----------------------------~~~~~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~-~~e~l~~~~ 162 (343)
T 3e38_A 113 -----------------------------PLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPE-HTALYQEGC 162 (343)
T ss_dssp -----------------------------GGCCSSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHH-HHHHHHTTC
T ss_pred -----------------------------CCcccCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccc-hHHHhcccC
Confidence 0012478899999999999999999987531 111 333 34479
Q ss_pred ccEEEEecCCCcHHHHHHHHHHcCCeeEeCCCCCCC
Q 014031 290 LHGLEVYRSDGKLVAYTDLADTYGLLKLGGSDYHGR 325 (432)
Q Consensus 290 ldGIEv~~~~~~~~~~~~lA~~~gLl~tgGSDfHg~ 325 (432)
+|+||||++...+.....+|+.++|..++|||+|++
T Consensus 163 iDaIEv~N~~~~n~~A~~la~~~~l~~~~GSDaH~~ 198 (343)
T 3e38_A 163 MHGIEVANGHLYMPEAIQWCLDKNLTMIGTSDIHQP 198 (343)
T ss_dssp CSEEEEEETTEECTHHHHHHHHHTCEEEEECCBCSC
T ss_pred ccEEEEcCCCCccHHHHHHHhhCCCceEeECCCCCC
Confidence 999999998743445568999999999999999997
No 4
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=99.90 E-value=1.1e-23 Score=202.37 Aligned_cols=180 Identities=21% Similarity=0.224 Sum_probs=124.4
Q ss_pred eEcceeeCcCC-CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-------C---------HHHHHHHHHhC-CCeEeeEEE
Q 014031 74 VFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDTMS-------G---------IPEAIETARRF-GMKIIPGVE 135 (432)
Q Consensus 74 ~vDLH~HT~~S-DG~~sp~elv~~A~~~Gl~~iaITDHdt~~-------g---------~~~~~~~a~~~-gi~vI~GiE 135 (432)
++|||+||.+| ||..+|++++++|++.|++.||||||+++. + +.++.++.++. +|.+++|+|
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~i~~G~E 80 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGIGLE 80 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 47999999999 999999999999999999999999999987 3 34444554554 999999999
Q ss_pred EEEeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChH
Q 014031 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (432)
Q Consensus 136 is~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~ 215 (432)
+++..+ ..+.+.++ |...+++ ..++++
T Consensus 81 i~~~~~----------------------~~~~~~~~------------------l~~~~~d-------------~vi~s~ 107 (267)
T 2yxo_A 81 ADFHPG----------------------TEGFLAQL------------------LRRYPFD-------------YVIGSV 107 (267)
T ss_dssp EECCTT----------------------CHHHHHHH------------------HHSSCCS-------------CEEEEC
T ss_pred eccCCC----------------------cHHHHHHH------------------HHhCCCC-------------EEEEee
Confidence 998531 01111111 2221111 023333
Q ss_pred HHHHHHHHcCcc----------ccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCC---C-----
Q 014031 216 HVARAMVEAGHV----------ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK---N----- 277 (432)
Q Consensus 216 hia~aLv~~G~~----------~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~---~----- 277 (432)
|++.. .++. .+..+++.+|+ ++++++++. |+++|+|||.+++ .
T Consensus 108 H~~~~---~~~~~~~~~~~~~~~~~~~~~~~y~---------------~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~ 168 (267)
T 2yxo_A 108 HYLGA---WPLDHPDHQEEYAWRDLKEVFRAYF---------------QEVEKAARS-GLFHAIGHLDLPKKFGHRLPEE 168 (267)
T ss_dssp CCBTT---BCTTCGGGGGGGGGSCHHHHHHHHH---------------HHHHHHHTS-SCCSEESCTTGGGTTSCCCCHH
T ss_pred EecCC---cCCCcHHHHHHHhcCCHHHHHHHHH---------------HHHHHHHhc-CCCCEEeCccHHHHhCCCCChH
Confidence 43321 0111 12233343443 678888885 9999999998632 1
Q ss_pred -----cHHHHHHHHHcCccEEEEecCCC--------cHHHHHHHHHHcCCeeEeCCCCCCCC
Q 014031 278 -----PAAIIRKLKDVGLHGLEVYRSDG--------KLVAYTDLADTYGLLKLGGSDYHGRG 326 (432)
Q Consensus 278 -----~~~li~~L~~~GldGIEv~~~~~--------~~~~~~~lA~~~gLl~tgGSDfHg~~ 326 (432)
...+++.+++.| .+|||+.+.. ....+.++|.++|+.+|+|||+|++.
T Consensus 169 ~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gSDaH~~~ 229 (267)
T 2yxo_A 169 ALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARELGIGLVLGSDAHRPE 229 (267)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHHHTCCEEEECCBSSGG
T ss_pred HHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHHcCCCEEEecCCCCHH
Confidence 124577778888 6999987531 35788999999999999999999974
No 5
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.88 E-value=1.3e-22 Score=192.78 Aligned_cols=175 Identities=22% Similarity=0.280 Sum_probs=119.3
Q ss_pred ceeEcceeeCcCC-CCCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHH--HH---HHH--HhCCCeEeeEEEEEEeecC
Q 014031 72 NVVFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPE--AI---ETA--RRFGMKIIPGVEISTIFCQ 142 (432)
Q Consensus 72 ~~~vDLH~HT~~S-DG~~sp~elv~~A~~~Gl~~iaITDHdt-~~g~~~--~~---~~a--~~~gi~vI~GiEis~~~~~ 142 (432)
+|++|||+||.+| ||..+|++++++|++.|++.||||||++ +.+... .. +.+ +..+|.+++|+|+++....
T Consensus 1 m~~~DlH~Ht~~Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~G~Ei~~~~~~ 80 (245)
T 1m65_A 1 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVD 80 (245)
T ss_dssp -CCEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEEEECTTSTTCCCTHHHHGGGGSCSEETTEEEEEEEEEEBCSTT
T ss_pred CCceEeCcCCCCCCCCCCcHHHHHHHHHHCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHhcCCCeEEEEEEeeeeCCC
Confidence 4689999999999 4777999999999999999999999999 655321 11 111 1258999999999986410
Q ss_pred CCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHHHHHHH
Q 014031 143 RGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMV 222 (432)
Q Consensus 143 ~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~hia~aLv 222 (432)
. + .+. ...+ +++| .+ .++..|
T Consensus 81 ------~--~-----~~~----~~~~------------------~~~l---d~---------------vi~~~h------ 101 (245)
T 1m65_A 81 ------G--E-----IDC----SGKM------------------FDSL---DL---------------IIAGFH------ 101 (245)
T ss_dssp ------C--C-----BSC----CHHH------------------HHHC---SE---------------EEEECC------
T ss_pred ------C--c-----hhH----HHHH------------------HhhC---CE---------------EEEeec------
Confidence 0 1 110 0111 1111 00 000000
Q ss_pred HcCccccHHHHHHHHhhCCCCcccCCC-CCCHHHHHHHHHHcCCEEEEeCCCCCCC---cHHHHHHHHHcCccEEEEecC
Q 014031 223 EAGHVENLKQAFARYLYDGGPAYSTGS-EPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRS 298 (432)
Q Consensus 223 ~~G~~~~~~~af~~yl~~~gp~yv~~~-~~~~eeaI~~I~~aGGi~VLAHP~~~~~---~~~li~~L~~~GldGIEv~~~ 298 (432)
.++|.+.. ...++++++.++ +||++|+|||+++.. .+.+++.+++.| .+||++++
T Consensus 102 -------------------~~~~~~~~~~~~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~ 160 (245)
T 1m65_A 102 -------------------EPVFAPHDKATNTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNS 160 (245)
T ss_dssp -------------------TTTSCCCCHHHHHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETT
T ss_pred -------------------CCccCcchHHHHHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECC
Confidence 01122211 134578888888 999999999987542 356788889999 79999987
Q ss_pred CC---------cHHHHHHHHHHcCCeeEeCCCCCCCC
Q 014031 299 DG---------KLVAYTDLADTYGLLKLGGSDYHGRG 326 (432)
Q Consensus 299 ~~---------~~~~~~~lA~~~gLl~tgGSDfHg~~ 326 (432)
.. ....+.++|.++|+.+++|||+|++.
T Consensus 161 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~gSDaH~~~ 197 (245)
T 1m65_A 161 SFLHSRKGSEDNCREVAAAVRDAGGWVALGSDSHTAF 197 (245)
T ss_dssp C----------CHHHHHHHHHHHTCCEEEECCBSSGG
T ss_pred CCcccCCCCCCchHHHHHHHHHcCCEEEEECCCCChH
Confidence 53 34678889999999999999999974
No 6
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=99.88 E-value=1.4e-22 Score=195.43 Aligned_cols=164 Identities=24% Similarity=0.342 Sum_probs=121.4
Q ss_pred CCceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC----CCC---------------HHH--------HHHH
Q 014031 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT----MSG---------------IPE--------AIET 122 (432)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt----~~g---------------~~~--------~~~~ 122 (432)
..|+++|||+||.+|||..+|++++++|++.|++.|+||||+. +.+ +.+ +.++
T Consensus 17 ~~~~~~DlH~Ht~~SDg~~t~ee~v~~A~~~Gl~~i~iTDH~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (255)
T 2anu_A 17 TEWLLCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSITDHIVDRRTLEQRKRNGEPLGAITEDKFQDYLKRLWREQKRA 96 (255)
T ss_dssp CEEEEEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHTTCCCCSCCSTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeecCCCcCCCCCHHHHHHHHHHCCCCEEEEcCCCCcccccccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 4589999999999999999999999999999999999999972 322 211 1223
Q ss_pred HHhCCCeEeeEEEEEEeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHH
Q 014031 123 ARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHV 202 (432)
Q Consensus 123 a~~~gi~vI~GiEis~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev 202 (432)
++..+|.+++|+|+++. +..+|+|+++.+.
T Consensus 97 ~~~~~i~v~~G~Ei~~~--------~~~~h~l~~~~~~------------------------------------------ 126 (255)
T 2anu_A 97 WEEYGMILIPGVEITNN--------TDLYHIVAVDVKE------------------------------------------ 126 (255)
T ss_dssp HHHHSCEEEEEEEEEET--------TTTEEEEEESCCS------------------------------------------
T ss_pred ccccCcEEEEEEEEeeC--------CCCeeEEEecccc------------------------------------------
Confidence 34569999999999985 2579999987431
Q ss_pred HHHhCCCCCCChHHHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCCCcHH--
Q 014031 203 AKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAA-- 280 (432)
Q Consensus 203 ~~~~g~~~~~gr~hia~aLv~~G~~~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~~~~~-- 280 (432)
|+ + ....++++++.++..|+++|+|||+++.....
T Consensus 127 ----------------------------------~~--------~-~~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~ 163 (255)
T 2anu_A 127 ----------------------------------YV--------D-PSLPVEEIVEKLKEQNALVIAAHPDRKKQDEEHL 163 (255)
T ss_dssp ----------------------------------CC--------C-TTSCHHHHHHHHHHTTCEEEECCCCTTC-----C
T ss_pred ----------------------------------cc--------C-CCCCHHHHHHHHHHCCCeEEEeCCCccccccccc
Confidence 00 0 01367899999999999999999987643211
Q ss_pred ---HH---HHHHHcCccEEEEecCCCcHHHHHHHHHHcCCeeEeCCCCCCCCCCCCCCcccc
Q 014031 281 ---II---RKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGSV 336 (432)
Q Consensus 281 ---li---~~L~~~GldGIEv~~~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~ 336 (432)
.. +.+. ..+++||++++..- ..+|+++++.+++|||+|.+. .+|..
T Consensus 164 ~~~~~~~~~~~~-~~~~aiEin~~~~~----~~~~~~~g~~~~~gSDAH~~~-----~ig~~ 215 (255)
T 2anu_A 164 SWYLWANMERFK-DTFDAWEIANRDDL----FNSVGVKKYRYVANSDFHELW-----HVYSW 215 (255)
T ss_dssp CCHHHHSTTTTT-TTCSEEEEEETTEE----CHHHHHTTCCEEEECCBCSGG-----GGSSE
T ss_pred cccccchhhhhh-ccCcEEEEcCCCch----hhHHHHcCCceEeccCCCCCc-----ccCCc
Confidence 11 1122 35799999987632 236889999999999999974 56653
No 7
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=99.76 E-value=1.2e-18 Score=169.43 Aligned_cols=173 Identities=20% Similarity=0.257 Sum_probs=118.0
Q ss_pred eEcceeeCcC--CCCCCCHHH---HHHHHHHcCCcEEEEecCCCCCC-----------HHHHHHHHHh--CCCeEeeEEE
Q 014031 74 VFELHSHSNF--SDGYLSPSK---LVERAHCNGVKVLALTDHDTMSG-----------IPEAIETARR--FGMKIIPGVE 135 (432)
Q Consensus 74 ~vDLH~HT~~--SDG~~sp~e---lv~~A~~~Gl~~iaITDHdt~~g-----------~~~~~~~a~~--~gi~vI~GiE 135 (432)
++|+||||.+ |||..|+++ +++.|.+.|++.|++|||..... +.++.+..++ .+|.+++|+|
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~E 80 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQE 80 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeE
Confidence 4899999998 599999997 99999999999999999964221 2223333333 4799999999
Q ss_pred EEEeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChH
Q 014031 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (432)
Q Consensus 136 is~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~ 215 (432)
+..... ....+ .+..+ +.++ +.
T Consensus 81 v~~~~~----------------------~~~~l----------------------~~~~~-~~l~------~~------- 102 (262)
T 3qy7_A 81 IRIYGE----------------------VEQDL----------------------AKRQL-LSLN------DT------- 102 (262)
T ss_dssp EECCTT----------------------HHHHH----------------------HTTCS-CCGG------GS-------
T ss_pred Eecchh----------------------HHHHH----------------------hcCCC-cEEC------Cc-------
Confidence 987421 00111 11000 0000 00
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC---cHHHHHHHHHcCccE
Q 014031 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHG 292 (432)
Q Consensus 216 hia~aLv~~G~~~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~~---~~~li~~L~~~GldG 292 (432)
+|+--.-|. ......+.++|..+..+|+++|||||.++.. ..+++..|++.|+ +
T Consensus 103 --------------------~~vl~e~~~--~~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~-~ 159 (262)
T 3qy7_A 103 --------------------KYILIEFPF--DHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA-A 159 (262)
T ss_dssp --------------------SEEEEECCT--TCCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-E
T ss_pred --------------------eEEEEeCCC--ccCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-E
Confidence 010000000 0112467899999999999999999987642 2357889999995 7
Q ss_pred EEEecCC-----C-cHHHHHHHHHHcCCeeEeCCCCCCCCC
Q 014031 293 LEVYRSD-----G-KLVAYTDLADTYGLLKLGGSDYHGRGG 327 (432)
Q Consensus 293 IEv~~~~-----~-~~~~~~~lA~~~gLl~tgGSDfHg~~~ 327 (432)
+|+..+. + ....+...+.++|++.+.|||+|++..
T Consensus 160 iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~~ 200 (262)
T 3qy7_A 160 SQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVKT 200 (262)
T ss_dssp EEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSSS
T ss_pred EEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCCC
Confidence 9998743 1 256777888899999999999999864
No 8
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.75 E-value=3.1e-18 Score=164.25 Aligned_cols=172 Identities=22% Similarity=0.165 Sum_probs=115.7
Q ss_pred eEcceeeCcCC--CCCCCHH---HHHHHHHHcCCcEEEEecCCCCC----CHH-------HHHHHHHh--CCCeEeeEEE
Q 014031 74 VFELHSHSNFS--DGYLSPS---KLVERAHCNGVKVLALTDHDTMS----GIP-------EAIETARR--FGMKIIPGVE 135 (432)
Q Consensus 74 ~vDLH~HT~~S--DG~~sp~---elv~~A~~~Gl~~iaITDHdt~~----g~~-------~~~~~a~~--~gi~vI~GiE 135 (432)
++|+|+||.+| ||..+++ +++++|.+.|++.|++|||.... ... ++.+..++ .+|.+++|+|
T Consensus 5 m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G~E 84 (247)
T 2wje_A 5 MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE 84 (247)
T ss_dssp EEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECCCE
T ss_pred CEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEeeE
Confidence 68999999998 9999998 69999999999999999996532 111 12222222 4899999999
Q ss_pred EEEeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChH
Q 014031 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (432)
Q Consensus 136 is~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~ 215 (432)
+.... .+.+. +.+. .-..+ .+.
T Consensus 85 ~~~~~--------------------------~~~~~------------------l~~~-~~~~l------~gs------- 106 (247)
T 2wje_A 85 IYYTP--------------------------DVLDK------------------LEKK-RIPTL------NDS------- 106 (247)
T ss_dssp EECCT--------------------------HHHHH------------------HHTT-CSCCG------GGS-------
T ss_pred EeecH--------------------------HHHHH------------------HhcC-CccEE------CCC-------
Confidence 98741 11111 1110 00000 000
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC---cHHHHHHHHHcCccE
Q 014031 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHG 292 (432)
Q Consensus 216 hia~aLv~~G~~~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~~~~---~~~li~~L~~~GldG 292 (432)
| |+-.+-+. .......++++..+..+|+++|||||.++.. ..+++..+++.|+.
T Consensus 107 ~--------------------~vl~e~~~--~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~- 163 (247)
T 2wje_A 107 R--------------------YALIEFSM--NTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY- 163 (247)
T ss_dssp S--------------------EEEEECCT--TCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE-
T ss_pred e--------------------EEEEeCCC--CcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE-
Confidence 0 00000000 0011235789999999999999999987642 35788999999987
Q ss_pred EEEecCCC-----------cHHHHHHHHHHcCCeeEeCCCCCCCC
Q 014031 293 LEVYRSDG-----------KLVAYTDLADTYGLLKLGGSDYHGRG 326 (432)
Q Consensus 293 IEv~~~~~-----------~~~~~~~lA~~~gLl~tgGSDfHg~~ 326 (432)
+|++++.. ....+..++.++|++.|.|||+|++.
T Consensus 164 lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GSDaH~~~ 208 (247)
T 2wje_A 164 TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLD 208 (247)
T ss_dssp EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEECCBCCSS
T ss_pred EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 99976432 23567788899999999999999985
No 9
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=99.71 E-value=3.8e-17 Score=175.10 Aligned_cols=207 Identities=16% Similarity=0.156 Sum_probs=130.5
Q ss_pred hhhhccccc-cceecccccCCCCCCCCccccccc---ccCCCCceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEe
Q 014031 33 QSLAFNSVT-EWVYLDQSHSSSSSEDDFGVHQIL---NRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALT 108 (432)
Q Consensus 33 ~~~a~~~~~-~W~~~~~~~~~~~~~~~f~~~~~~---~~~~~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaIT 108 (432)
+..-|+..+ .|+-|-.+ ....++.+..+| .--...++++||||||.||||..+|++++++|++.|++.||||
T Consensus 287 E~~if~~lgl~~i~Pe~R----e~~~e~~~a~lp~~~~lv~~~~~~~DlH~HT~~SDG~~t~eemv~~A~~~Gl~~IaiT 362 (578)
T 2w9m_A 287 EAVVFHALDLPFRPAEYR----EPEHDDLWQTLPDPAELVTVGDLRGMIHTHSTWSDGGASIREMAEATLTLGHEFLGTA 362 (578)
T ss_dssp HHHHHHHTTCCCCCGGGC----SGGGTTTTTTSCCGGGSCCGGGCCEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCCCChhhc----CCcChhhhccCCCcccccchhhhceEEEecCCccCCCCCHHHHHHHHHHCCCeEEEEc
Confidence 444444444 78887765 222333322222 1112457899999999999999999999999999999999999
Q ss_pred cCCCCCCH------HHHH------HHHHhCCCeEeeEEEEEEeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHH
Q 014031 109 DHDTMSGI------PEAI------ETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIR 176 (432)
Q Consensus 109 DHdt~~g~------~~~~------~~a~~~gi~vI~GiEis~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir 176 (432)
||++..+. ..+. +.+++.+|.+++|+|+++... + . .+. .+. ++
T Consensus 363 DH~~~~~~~~~~~~~~~~~~~~~i~~l~~~gi~il~GiEv~i~~~------G-~-------ld~----~~~---~l---- 417 (578)
T 2w9m_A 363 DHSRAAYYANGLTIERLREQLKEIRELQRAGLPIVAGSEVDILDD------G-S-------LDF----PDD---VL---- 417 (578)
T ss_dssp EEBTTCGGGTCBCHHHHHHHHHHHHHHHHTTCCEECEEEEEBCTT------S-C-------BSS----CHH---HH----
T ss_pred CCCCccccccCCCHHHHHHHHHHHHHHHhcCCeEEEeeeecccCC------c-c-------hhh----HHH---HH----
Confidence 99988543 2221 122333999999999998631 0 0 110 011 10
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHH
Q 014031 177 DGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVA 256 (432)
Q Consensus 177 ~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~hia~aLv~~G~~~~~~~af~~yl~~~gp~yv~~~~~~~eea 256 (432)
... ++ .++..|.. +..+..+ ..+++
T Consensus 418 --------------~~~----D~-----------vI~svH~~-------~~~~~~~-------------------~~~~~ 442 (578)
T 2w9m_A 418 --------------GEL----DY-----------VVVSVHSN-------FTLDAAR-------------------QTERL 442 (578)
T ss_dssp --------------TTS----SE-----------EEEECCSC-------TTSCHHH-------------------HHHHH
T ss_pred --------------hcC----CE-----------EEEEeccC-------CCCCHHH-------------------HHHHH
Confidence 010 00 01111110 0000000 12355
Q ss_pred HHHHHHcCCEEEEeCCCCC---------CCcHHHHHHHHHcCccEEEEecCC---CcHHHHHHHHHHcCCeeEeCCCCCC
Q 014031 257 VQLIHRTGGLAVLAHPWAL---------KNPAAIIRKLKDVGLHGLEVYRSD---GKLVAYTDLADTYGLLKLGGSDYHG 324 (432)
Q Consensus 257 I~~I~~aGGi~VLAHP~~~---------~~~~~li~~L~~~GldGIEv~~~~---~~~~~~~~lA~~~gLl~tgGSDfHg 324 (432)
++++. .|+++|+|||+.. .+.+.+++.+++.| .+||++++. .....+.++|.+ |+.++.|||+|.
T Consensus 443 ~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g-~~lEIN~~~~r~~~~~~~~~~a~e-Gl~i~igSDAH~ 519 (578)
T 2w9m_A 443 IRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANG-TVVEINANAARLDLDWREALRWRE-RLKFAINTDAHV 519 (578)
T ss_dssp HHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECSTTTCBSCHHHHHHHTT-TCCEEEECCCSS
T ss_pred HHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCC-CEEEEECCCCCcCcHHHHHHHHHc-CCEEEEECCCCC
Confidence 55555 5999999999742 12356788888888 599998865 246778899999 999999999999
Q ss_pred CC
Q 014031 325 RG 326 (432)
Q Consensus 325 ~~ 326 (432)
+.
T Consensus 520 ~~ 521 (578)
T 2w9m_A 520 PG 521 (578)
T ss_dssp GG
T ss_pred hh
Confidence 74
No 10
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=99.71 E-value=8e-17 Score=179.93 Aligned_cols=84 Identities=25% Similarity=0.387 Sum_probs=75.4
Q ss_pred eeEcceeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEEEEEeecCCCCCCCCc
Q 014031 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEP 150 (432)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~~~~~~ 150 (432)
.++|||+||.|| ||..+|++++++|++.|+++||||||+++.|+.++.+++++.||++|+|+|+++.+... ....
T Consensus 5 ~~vdLH~HT~~S~lDG~~~~~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~---~~~~ 81 (910)
T 2hnh_A 5 RFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLL---GDEL 81 (910)
T ss_dssp CCCCCCBCCGGGSSSCCSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCEEEEEEEEEEECTTT---TTCC
T ss_pred ceeeecccccCchhcccCCHHHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHCCCeEEEEEEEEEecCCC---Cccc
Confidence 479999999999 99999999999999999999999999999999999999999999999999999976310 0135
Q ss_pred EEEEEEecc
Q 014031 151 VHILAYYSS 159 (432)
Q Consensus 151 vHiLgYg~d 159 (432)
+|+++|..+
T Consensus 82 ~hlv~la~n 90 (910)
T 2hnh_A 82 THLTVLAAN 90 (910)
T ss_dssp EEEEEEECS
T ss_pred ceEEEEEcC
Confidence 899999874
No 11
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=99.62 E-value=3.3e-15 Score=160.01 Aligned_cols=173 Identities=23% Similarity=0.202 Sum_probs=112.8
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHH------H-------HHHHHHh-CCCeEeeEEEEE
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIP------E-------AIETARR-FGMKIIPGVEIS 137 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~------~-------~~~~a~~-~gi~vI~GiEis 137 (432)
.|++||||||.+|||..++++++++|++.|++.|+||||++..++. + +.++.++ .+|.+++|+|++
T Consensus 336 ~~~~DlH~HT~~SDG~~t~ee~v~~A~~~G~~~iaiTDH~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~i~i~~G~Ei~ 415 (575)
T 3b0x_A 336 QVKGDLQVHSTYSDGQNTLEELWEAAKTMGYRYLAVTDHSPAVRVAGGPSPEEALKRVGEIRRFNETHGPPYLLAGAEVD 415 (575)
T ss_dssp GCCEEEEECCTTTTCSCCHHHHHHHHHHTTCSEEEEEEECTTTTTSSCSCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEE
T ss_pred hcCeeEeecCCccCCCCCHHHHHHHHHHCCCCEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEeec
Confidence 5899999999999999999999999999999999999999876531 1 2223233 489999999999
Q ss_pred EeecCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHH
Q 014031 138 TIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHV 217 (432)
Q Consensus 138 ~~~~~~~~~~~~~vHiLgYg~d~g~~~~~~L~~~l~~ir~~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~hi 217 (432)
+... . ++ +. .+.+ + .. + ++ .++..|.
T Consensus 416 ~~~d-------g--~l-----~~----~~~~---l------------------~~--~--d~-----------vL~svH~ 441 (575)
T 3b0x_A 416 IHPD-------G--TL-----DY----PDWV---L------------------RE--L--DL-----------VLVSVHS 441 (575)
T ss_dssp BCTT-------S--CB-----SS----CHHH---H------------------TT--C--SE-----------EEEECCS
T ss_pred ccCC-------C--Cc-----hh----HHHH---H------------------hh--C--CE-----------EEEEeee
Confidence 8631 0 00 00 0111 0 00 0 00 0000000
Q ss_pred HHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCEEEEeCCCC-C-----C---CcHHHHHHHHHc
Q 014031 218 ARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWA-L-----K---NPAAIIRKLKDV 288 (432)
Q Consensus 218 a~aLv~~G~~~~~~~af~~yl~~~gp~yv~~~~~~~eeaI~~I~~aGGi~VLAHP~~-~-----~---~~~~li~~L~~~ 288 (432)
. +-.+..+ ..+++++.++ .|+++|+|||+. + . ..+.+++.+++.
T Consensus 442 ~-------~~~~~~~-------------------~~~~l~~~i~-~g~v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~ 494 (575)
T 3b0x_A 442 R-------FNLPKAD-------------------QTKRLLKALE-NPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEK 494 (575)
T ss_dssp C-------TTSCHHH-------------------HHHHHHHHTT-CTTCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHH
T ss_pred C-------CCCCHHH-------------------HHHHHHHHHh-cCCCeEEECCchhhcCCCcCchHHHHHHHHHHHHc
Confidence 0 0000000 0134555555 799999999972 1 1 234577777777
Q ss_pred CccEEEEecCC---CcHHHHHHHHHHcCCeeEeCCCCCCCC
Q 014031 289 GLHGLEVYRSD---GKLVAYTDLADTYGLLKLGGSDYHGRG 326 (432)
Q Consensus 289 GldGIEv~~~~---~~~~~~~~lA~~~gLl~tgGSDfHg~~ 326 (432)
| .++|+..+. .....+.++|.++|+..+.|||+|.+.
T Consensus 495 g-~~lEIN~~~~~~~~~~~~~~~a~e~G~~~vigSDAH~~~ 534 (575)
T 3b0x_A 495 G-VAVEIDGYYDRMDLPDDLARMAYGMGLWISLSTDAHQTD 534 (575)
T ss_dssp T-CEEEEECCTTTCBSCHHHHHHHHHTTCCEEEECCBSSGG
T ss_pred C-CEEEEeCCCCcCCchHHHHHHHHHcCCeEEEECCCCChH
Confidence 7 589996644 124667888999999999999999974
No 12
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=99.61 E-value=6.1e-15 Score=167.83 Aligned_cols=88 Identities=26% Similarity=0.295 Sum_probs=74.9
Q ss_pred ceeEcceeeCcCC--CCCCCHHHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEEEEEeecCC-CCC
Q 014031 72 NVVFELHSHSNFS--DGYLSPSKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQR-GSE 146 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG~~sp~elv~~A~~--~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~-~~~ 146 (432)
..++|||+||.|| ||..+|++++++|++ .|+++||||||+++.|+.++.++|++.||++|+|+|+++..... +-.
T Consensus 5 ~~fvdLH~HT~~SlLDG~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~~gIk~I~G~E~~~~~~~~~d~~ 84 (1220)
T 2hpi_A 5 LKFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATAMGVKPIIGYEAYVAAESRFDRK 84 (1220)
T ss_dssp CCCCCCSBCCTTSTTTCCCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHTTTCEEEEEEEEEEESSCTTCCC
T ss_pred CcEeEcccccCCCcccccCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHHcCCeEEEEEEEEEecccccccc
Confidence 4579999999999 999999999999999 99999999999999999999999999999999999999975321 100
Q ss_pred C----CC-cEEEEEEecc
Q 014031 147 S----EE-PVHILAYYSS 159 (432)
Q Consensus 147 ~----~~-~vHiLgYg~d 159 (432)
. .. ..|++.|..+
T Consensus 85 ~~~~~d~~~~hLvlLAkN 102 (1220)
T 2hpi_A 85 RGKGLDGGYFHLTLLAKD 102 (1220)
T ss_dssp CC-----CEEEEEEEECS
T ss_pred ccccccCccceEEEEEcC
Confidence 0 11 3799999864
No 13
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=99.51 E-value=9.3e-14 Score=136.41 Aligned_cols=67 Identities=18% Similarity=0.271 Sum_probs=53.1
Q ss_pred eeEcceeeCcCCC-CC-CCHHHHHHHHHHcCCcEEEEecCCCCCC-H---------------------HH----HHHHHH
Q 014031 73 VVFELHSHSNFSD-GY-LSPSKLVERAHCNGVKVLALTDHDTMSG-I---------------------PE----AIETAR 124 (432)
Q Consensus 73 ~~vDLH~HT~~SD-G~-~sp~elv~~A~~~Gl~~iaITDHdt~~g-~---------------------~~----~~~~a~ 124 (432)
|++|+|+||.+|| |. .++++++++|++.|++.|+||||..... + .+ +.++.+
T Consensus 1 m~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~TdH~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~ 80 (283)
T 3dcp_A 1 MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKK 80 (283)
T ss_dssp CCEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEEEEECCCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHH
T ss_pred CCeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEecCCCCcchhhhcccccccccccccchHHHHHHHHHHHHHHHH
Confidence 5799999999997 55 6999999999999999999999987642 1 11 122223
Q ss_pred h--CCCeEeeEEEEEEe
Q 014031 125 R--FGMKIIPGVEISTI 139 (432)
Q Consensus 125 ~--~gi~vI~GiEis~~ 139 (432)
+ .+|.|+.|+|+...
T Consensus 81 ~y~~~I~Il~GiE~d~~ 97 (283)
T 3dcp_A 81 KYASDLLIHIGFEVDYL 97 (283)
T ss_dssp HTTTTCEEEEEEEEECC
T ss_pred HccCCCeEEEEEEeccc
Confidence 3 37999999999875
No 14
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=99.43 E-value=2.1e-13 Score=153.21 Aligned_cols=101 Identities=29% Similarity=0.412 Sum_probs=81.2
Q ss_pred CceeEcceeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEEEEEeecCCCC---
Q 014031 71 NNVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGS--- 145 (432)
Q Consensus 71 ~~~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~--- 145 (432)
+++++|||+||.|| ||..+|++++++|++.|+++||||||+++.|+.++.++|++.||++|+|+|+++.+.....
T Consensus 113 ~~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~ 192 (1041)
T 3f2b_A 113 GEKRVELHLHTPMSQMDAVTSVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYN 192 (1041)
T ss_dssp TSCCCBCCBCCTTSTTTCCSCHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC-------
T ss_pred CcceEEcccCCcCccccccCCHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccc
Confidence 56899999999999 9999999999999999999999999999999999999999999999999999997642100
Q ss_pred -------CCCCcEEEEEEeccCCCCchHHHHHHHH
Q 014031 146 -------ESEEPVHILAYYSSCGPSKYEELENFLA 173 (432)
Q Consensus 146 -------~~~~~vHiLgYg~d~g~~~~~~L~~~l~ 173 (432)
......|++.|..+ ..++..|.++++
T Consensus 193 ~~~~~~~~~~~~~hlvlLAkN--~~Gy~nL~kLvS 225 (1041)
T 3f2b_A 193 ETHRRLGSGSGPFHVTLLAQN--ETGLKNLFKLVS 225 (1041)
T ss_dssp -----------CEEEEEEECS--HHHHHHHHHHHH
T ss_pred cccccccccCCCceEEEEeCC--HHHHHHHHHHHH
Confidence 01234799888754 334555555443
No 15
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=98.77 E-value=3.1e-08 Score=92.96 Aligned_cols=65 Identities=11% Similarity=0.200 Sum_probs=48.1
Q ss_pred HHHcCCEEEEeCCCCCCC----cHHHHHHHHHcCccEEEEecCCC------c-------HHHHHHHHHHcCCeeEeCCCC
Q 014031 260 IHRTGGLAVLAHPWALKN----PAAIIRKLKDVGLHGLEVYRSDG------K-------LVAYTDLADTYGLLKLGGSDY 322 (432)
Q Consensus 260 I~~aGGi~VLAHP~~~~~----~~~li~~L~~~GldGIEv~~~~~------~-------~~~~~~lA~~~gLl~tgGSDf 322 (432)
+-+. .+-|++||+..+. ...+++..++.|+ .+|+.++.. . ...+.++|+++|..++-|||+
T Consensus 92 a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv-~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDA 169 (212)
T 1v77_A 92 SIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNV-ALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSA 169 (212)
T ss_dssp HHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTC-EEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred HHhC-CCCEEecccccccCCCCCHHHHHHHHHCCe-EEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 3445 7999999985421 2466777778884 699988641 1 125678999999999999999
Q ss_pred CCCC
Q 014031 323 HGRG 326 (432)
Q Consensus 323 Hg~~ 326 (432)
|.+.
T Consensus 170 h~~~ 173 (212)
T 1v77_A 170 QEKW 173 (212)
T ss_dssp SSGG
T ss_pred CChh
Confidence 9974
No 16
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=91.99 E-value=0.23 Score=46.72 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=45.2
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeE
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPG 133 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~G 133 (432)
++.+|.|||........+++++++++.+.|++.+.++-.+ ......+.+.+++.+..++++
T Consensus 4 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~~~i~~~ 64 (272)
T 2y1h_A 4 VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEH-SGEFEKIMQLSERYNGFVLPC 64 (272)
T ss_dssp CCEEEEEECTTSGGGTTTHHHHHHHHHHTTEEEEEECCSS-GGGHHHHHHHHHHTTTTEEEE
T ss_pred CcEEEEeeCCCchhhhcCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCCCCEEEE
Confidence 5689999998765444579999999999999998876433 345566777777776545543
No 17
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=88.29 E-value=0.88 Score=42.17 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=39.9
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (432)
++.+|.|||.....-..+++++++.+.+.|++.+.++-.+ ......+.+.+++.+
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATE-AENFARVLALAENYQ 57 (259)
T ss_dssp CCEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCS-GGGHHHHHHHHHHCT
T ss_pred ceEEEeeecCCchhhccCHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHhCC
Confidence 3589999998876444579999999999999987765222 234556666666654
No 18
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=85.27 E-value=0.57 Score=45.36 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=39.6
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (432)
++.+|-|||-...+-....++++++|++.|++.+.++= .+...+..+.+.++++
T Consensus 1 M~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 1 MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQL 54 (287)
T ss_dssp CCEEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred CceEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhC
Confidence 36799999998765555799999999999999988862 1122345566666654
No 19
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=84.63 E-value=0.42 Score=45.58 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=37.8
Q ss_pred eeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 014031 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (432)
+.+|-|||-.+.+ ..++++++|++.|+..+.++ .+...+..+.+.++++
T Consensus 2 ~liDtH~HL~~~~---d~~~vl~~a~~~gV~~i~v~--~~~~~~~~~~~la~~~ 50 (254)
T 3gg7_A 2 SLIDFHVHLDLYP---DPVAVARACEERQLTVLSVT--TTPAAWRGTLALAAGR 50 (254)
T ss_dssp CCEEEEECGGGSS---SHHHHHHHHHHTTCEEEECC--SSGGGHHHHHGGGTTC
T ss_pred ceEEEeeCCCCCC---CHHHHHHHHHHCCCcEEEec--CCHHHHHHHHHHHHhC
Confidence 5799999998653 78999999999999988764 3455566666666654
No 20
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=83.89 E-value=1.1 Score=41.53 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=37.5
Q ss_pred eeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 014031 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (432)
+.+|.|+|....+-..+++++++.+.+.|++.+.++--+ ......+.+.+++.+
T Consensus 4 ~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (264)
T 1xwy_A 4 RMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTN-LRESQQAQKLARQYS 57 (264)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCS-HHHHHHHHHHHHHST
T ss_pred cEEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 479999998765434569999999999999997765221 223445566666654
No 21
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=82.30 E-value=1.6 Score=40.19 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=38.1
Q ss_pred eeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 014031 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (432)
|.+|.|+|........+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+
T Consensus 1 m~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 54 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFN-KSTIERAMKLIDEYD 54 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECS-HHHHHHHHHHHHHCT
T ss_pred CeEEEeeCCCCcccccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 479999998765444579999999999999988776554 222344556666654
No 22
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=81.86 E-value=1 Score=41.74 Aligned_cols=54 Identities=11% Similarity=0.066 Sum_probs=36.6
Q ss_pred eeEcceeeCcCCCC---CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 014031 73 VVFELHSHSNFSDG---YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (432)
Q Consensus 73 ~~vDLH~HT~~SDG---~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (432)
|.+|.|+|....+- ..+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 58 (265)
T 1yix_A 2 FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATT-LPSYLHMRDLVGERD 58 (265)
T ss_dssp CEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSS-HHHHHHHHHHHCSCT
T ss_pred cEEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 58999999875432 5689999999999999998775322 112333445554443
No 23
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=81.36 E-value=0.94 Score=43.54 Aligned_cols=55 Identities=18% Similarity=0.201 Sum_probs=37.9
Q ss_pred ceeEcceeeCcCC--CCC--------CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 014031 72 NVVFELHSHSNFS--DGY--------LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG~--------~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (432)
++.+|.|+|-... ++. .++++++++|++.|++.+.++-.+ ......+.+.+++.+
T Consensus 1 ~~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~-~~~~~~~~~la~~~~ 65 (301)
T 2xio_A 1 MKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGN-LQDSKDALHLAQTNG 65 (301)
T ss_dssp CCEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCS-HHHHHHHHHHHTTCT
T ss_pred CeEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 3679999998765 332 588999999999999999887321 223344555555443
No 24
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=74.88 E-value=2 Score=42.35 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=41.3
Q ss_pred cccCCCCceeEcceeeCcCCC--C--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 014031 65 LNRAVDNNVVFELHSHSNFSD--G--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (432)
Q Consensus 65 ~~~~~~~~~~vDLH~HT~~SD--G--------~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (432)
|++....++.+|.|||-.... | .-+.++++++|++.|+..+.++== +......+.++++++
T Consensus 19 ~~~~~~~m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 19 PGSMSMAQQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKY 89 (325)
T ss_dssp ----CCCCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHH
T ss_pred CcccccCCCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHC
Confidence 333324467899999988652 2 467999999999999998887632 233455666777664
No 25
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=67.90 E-value=2.2 Score=39.97 Aligned_cols=56 Identities=7% Similarity=0.165 Sum_probs=40.4
Q ss_pred CceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 014031 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (432)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (432)
.--++|-|||-.+.+-..+++++++.+.+.|++.+.++-.+ ......+.+.+++.+
T Consensus 10 ~~~~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~~-~~~~~~~~~l~~~~p 65 (268)
T 1j6o_A 10 HHHMVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVN-LEDSKKSLDLSKTSD 65 (268)
T ss_dssp CCCEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECSS-HHHHHHHHHHHTTCT
T ss_pred cccccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 34578999999988766789999999999999887765321 222344555665554
No 26
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=63.96 E-value=5.7 Score=37.62 Aligned_cols=64 Identities=19% Similarity=0.149 Sum_probs=42.3
Q ss_pred eeEcceeeCcCC--CC-----C----CCH-HHH---HHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCeEeeEEEE
Q 014031 73 VVFELHSHSNFS--DG-----Y----LSP-SKL---VERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (432)
Q Consensus 73 ~~vDLH~HT~~S--DG-----~----~sp-~el---v~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vI~GiEi 136 (432)
-.+|.|+|...+ +. . ++. +.+ +++|++.|++.+...-++.. .....+.+.+++.++.+++++-+
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 479999999763 21 1 011 223 48899999999877666633 33666777788888777766443
No 27
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=60.66 E-value=11 Score=34.89 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=29.5
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT 112 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt 112 (432)
.|.+|.|+|... .++++++.+.+.|++.+.+.-+..
T Consensus 2 ~m~iD~H~Hl~~-----~~~~~l~~m~~~Gv~~~v~~~~~~ 37 (272)
T 3cjp_A 2 SLIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSI 37 (272)
T ss_dssp -CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSC
T ss_pred ceEEEehhhcCC-----CHHHHHHHHHHcCCCEEEEeCCCC
Confidence 468999999864 368999999999999998877644
No 28
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=58.13 E-value=16 Score=33.66 Aligned_cols=42 Identities=12% Similarity=-0.018 Sum_probs=34.4
Q ss_pred CcHHHHHHHHHcCccEEEEecCC-CcHHHHHHHHHHcCCeeEe
Q 014031 277 NPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 277 ~~~~li~~L~~~GldGIEv~~~~-~~~~~~~~lA~~~gLl~tg 318 (432)
..++.++.+++.|++|||+..+. .+.+.+.++++++||-+++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVL 66 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEE
Confidence 34678888999999999998764 3577888999999997764
No 29
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=57.93 E-value=4.6 Score=40.65 Aligned_cols=29 Identities=28% Similarity=0.281 Sum_probs=26.1
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCc
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (432)
..+++||+|- ||+++|+.+++.|+++|++
T Consensus 29 LPKvELH~HL---dGsl~p~tl~~LA~~~g~~ 57 (380)
T 4gxw_A 29 LPKVELHCHL---LGAVRHDTFVALAQRSGAP 57 (380)
T ss_dssp SCEEECCBBG---GGCCCHHHHHHHHHHHTCS
T ss_pred ChhHHhhcCC---cCCCCHHHHHHHHHHhCCC
Confidence 4579999997 6999999999999999976
No 30
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=57.82 E-value=10 Score=38.49 Aligned_cols=55 Identities=22% Similarity=0.169 Sum_probs=41.6
Q ss_pred CceeEcceeeCcCC--CC--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 014031 71 NNVVFELHSHSNFS--DG--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (432)
Q Consensus 71 ~~~~vDLH~HT~~S--DG--------~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (432)
.++.+|.|||-+.+ +| .-..++++++|++.|+..+.+|== ++.....+.++|+++
T Consensus 11 ~~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~-~l~~s~~~~~La~~~ 75 (401)
T 3e2v_A 11 PLKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGS-SIAESQSAIELVSSV 75 (401)
T ss_dssp CCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEecC-CHHHHHHHHHHHHHC
Confidence 36789999999865 43 257899999999999999998732 234456677777765
No 31
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=56.01 E-value=5.1 Score=40.13 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=26.5
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCc
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (432)
..+++||+|- ||+++|+.+.+.|+++|++
T Consensus 6 lPK~ELH~HL---~Gsl~p~tl~~La~~~~~~ 34 (367)
T 3iar_A 6 KPKVELHVHL---DGSIKPETILYYGRRRGIA 34 (367)
T ss_dssp SCEEECCBBG---GGSCCHHHHHHHHHHHTCC
T ss_pred CCeeEeeecc---cCCCCHHHHHHHHHhcCCC
Confidence 5689999998 6999999999999999975
No 32
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=55.08 E-value=5.4 Score=39.47 Aligned_cols=30 Identities=37% Similarity=0.524 Sum_probs=27.1
Q ss_pred CceeEcceeeCcCCCCCCCHHHHHHHHHHcCCc
Q 014031 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (432)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (432)
...+++||+|- ||+++|+.+.+.|+++|++
T Consensus 12 ~lPK~ELH~Hl---~Gsl~p~tl~~la~~~~~~ 41 (343)
T 3rys_A 12 APPVAELHLHI---EGTLQPELIFALAERNGIE 41 (343)
T ss_dssp CCCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred cCCceeeEecC---ccCCCHHHHHHHHHhcCCC
Confidence 35699999998 6999999999999999976
No 33
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=54.90 E-value=5.5 Score=39.10 Aligned_cols=29 Identities=34% Similarity=0.368 Sum_probs=26.3
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCc
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (432)
..+++||+|- ||+++|+.+.+.|+++|++
T Consensus 10 lPK~ELH~Hl---~Gsl~~~t~~~la~~~~~~ 38 (326)
T 3pao_A 10 LPKAELHLHL---EGTLEPELLFALAERNRIA 38 (326)
T ss_dssp SCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred CCceEEEecc---cCCCCHHHHHHHHHhcCCC
Confidence 3589999998 6999999999999999976
No 34
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=52.15 E-value=37 Score=31.72 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecC-CCcHHHHHHHHHHc
Q 014031 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS-DGKLVAYTDLADTY 312 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~-~~~~~~~~~lA~~~ 312 (432)
+.++.+.+.+.|=++|+-.... .....+.+.|.+.|+..||+-.. ....+.+.++.+++
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~ 83 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ 83 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 5678899999999999976632 23356778889999999999544 44455666677766
No 35
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=49.15 E-value=19 Score=34.85 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=38.2
Q ss_pred eeEcceeeCcCCCCC------------CCHHH-H---HHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhCCCeEee
Q 014031 73 VVFELHSHSNFSDGY------------LSPSK-L---VERAHCNGVKVLALTDHD-TMSGIPEAIETARRFGMKIIP 132 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~------------~sp~e-l---v~~A~~~Gl~~iaITDHd-t~~g~~~~~~~a~~~gi~vI~ 132 (432)
-.+|.|+|-.+.-+. -++++ + +++|++.|+..|...=-+ ....+..+.+.+++.++.++.
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~ 92 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVA 92 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEEC
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEE
Confidence 478999998763111 12333 3 788999999886543322 224567777777777765543
No 36
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=48.46 E-value=30 Score=30.75 Aligned_cols=63 Identities=17% Similarity=0.096 Sum_probs=42.9
Q ss_pred HHHHHHHHc-CCEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecCCC--cHHHHHHHHHHcCCeeE
Q 014031 255 VAVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--KLVAYTDLADTYGLLKL 317 (432)
Q Consensus 255 eaI~~I~~a-GGi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~~~--~~~~~~~lA~~~gLl~t 317 (432)
++|+.+++. -+++|.+|+.....+...++.+.+.|.|++=+..... ....+.+.++++|+.+.
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~ 107 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVV 107 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEE
Confidence 677777776 4788888874333334457788888988888865443 23567778888887544
No 37
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=47.65 E-value=16 Score=34.52 Aligned_cols=57 Identities=5% Similarity=0.078 Sum_probs=37.3
Q ss_pred CCceeEcceeeCcCCCC------------CCCHHHHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhC
Q 014031 70 DNNVVFELHSHSNFSDG------------YLSPSKLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRF 126 (432)
Q Consensus 70 ~~~~~vDLH~HT~~SDG------------~~sp~elv~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~ 126 (432)
.+.+.+|-|+|-...+= ..+++++++.+.+.|++.+.+.-=+.. .....+.+.+++.
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~ 92 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQY 92 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHS
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHC
Confidence 44578999999974321 468999999999999999888732111 1123345555554
No 38
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=45.81 E-value=29 Score=32.09 Aligned_cols=40 Identities=10% Similarity=0.140 Sum_probs=28.1
Q ss_pred cHHHHHHHHHcCccEEEEecCC--CcHHHHHHHHHHcCCeeE
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSD--GKLVAYTDLADTYGLLKL 317 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~--~~~~~~~~lA~~~gLl~t 317 (432)
..+.++.++++|+++||+.... ...+.+.++++++||-++
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~ 81 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVS 81 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEEC
T ss_pred HHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEE
Confidence 4567777777888888887652 345667777778888664
No 39
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=45.16 E-value=55 Score=29.87 Aligned_cols=46 Identities=4% Similarity=-0.131 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEe
Q 014031 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (432)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI 131 (432)
-+..++++.++.+++.|++.|-+..-.. ....++.+.+++.||.+.
T Consensus 20 f~~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 20 FNEVPFLERFRLAAEAGFGGVEFLFPYD-FDADVIARELKQHNLTQV 65 (269)
T ss_dssp CTTSCHHHHHHHHHHTTCSEEECSCCTT-SCHHHHHHHHHHTTCEEE
T ss_pred hccCCHHHHHHHHHHcCCCEEEecCCcc-CCHHHHHHHHHHcCCcEE
Confidence 5678999999999999999999975322 347778888889998873
No 40
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=44.55 E-value=67 Score=29.55 Aligned_cols=65 Identities=14% Similarity=0.046 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecCC-CcHHHHHHHHHHc-CCee
Q 014031 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTY-GLLK 316 (432)
Q Consensus 251 ~~~eeaI~~I~~aGGi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~~-~~~~~~~~lA~~~-gLl~ 316 (432)
.+..+.++.+...+=++|+-... .....++++.+.+.|++.||+-... ...+.+.++++++ ++.+
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~~~-~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~v 71 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIALDN-ADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLI 71 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECCSS-GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEE
T ss_pred cchHHHHHHHHHCCeEEEEeCCC-HHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEE
Confidence 46678899999999999997642 2233467888889999999997644 3345566688877 4443
No 41
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=44.21 E-value=27 Score=31.55 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=33.2
Q ss_pred cHHHHHHHHHcCccEEEEecCC-CcHHHHHHHHHHcCCeeEe
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~-~~~~~~~~lA~~~gLl~tg 318 (432)
.++.++.+++.|+++||+..+. .+.+.+.++++++||-+++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 17 FIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp GGGHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEE
Confidence 4567888889999999998654 3567788999999998764
No 42
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=43.11 E-value=31 Score=31.85 Aligned_cols=58 Identities=10% Similarity=0.006 Sum_probs=42.3
Q ss_pred CCceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeE
Q 014031 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (432)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (432)
.++|++-++..+. ...++++.++.+++.|++.|-+.-.+......++.+.+++.||.+
T Consensus 23 ~m~mklg~~~~~~---~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 23 DLELKLSFQEGIA---PGESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKV 80 (287)
T ss_dssp CCCCEEEEETTSS---CCSSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEE
T ss_pred cceeeEEEEeccc---CCCCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeE
Confidence 3445555443332 226899999999999999999988754445677777888888876
No 43
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=42.84 E-value=17 Score=33.60 Aligned_cols=62 Identities=11% Similarity=0.092 Sum_probs=39.8
Q ss_pred eeEcceeeCcCCC---------CCCCH---HHHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCeEeeEE
Q 014031 73 VVFELHSHSNFSD---------GYLSP---SKLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGV 134 (432)
Q Consensus 73 ~~vDLH~HT~~SD---------G~~sp---~elv~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vI~Gi 134 (432)
-.+|.|+|-.... ...++ .+.+++|++.|+..+..+-++.. ..+..+.+.+++.++.+++++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACT 80 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEE
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEee
Confidence 5789999986321 11222 33677888999999876655423 246667777777777666543
No 44
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=41.24 E-value=30 Score=31.43 Aligned_cols=13 Identities=8% Similarity=0.176 Sum_probs=6.6
Q ss_pred CHHHHHHHHHHcC
Q 014031 252 LAEVAVQLIHRTG 264 (432)
Q Consensus 252 ~~eeaI~~I~~aG 264 (432)
+++++++.++++|
T Consensus 31 ~~~~~l~~~~~~G 43 (257)
T 3lmz_A 31 DLDTTLKTLERLD 43 (257)
T ss_dssp CHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhC
Confidence 4455555555554
No 45
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=41.20 E-value=44 Score=33.16 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=40.4
Q ss_pred ceeEcceeeCcCC--CCC---------------------CCHHHH-------HHHHHHcCCcEEEEe--cCCCCCCHHHH
Q 014031 72 NVVFELHSHSNFS--DGY---------------------LSPSKL-------VERAHCNGVKVLALT--DHDTMSGIPEA 119 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG~---------------------~sp~el-------v~~A~~~Gl~~iaIT--DHdt~~g~~~~ 119 (432)
+=.||.|+|...+ .|. ++++++ +..+.+.|+..+... -+.....+..+
T Consensus 87 PGlID~H~Hl~~~~~rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~ 166 (479)
T 3h4u_A 87 PGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDS 166 (479)
T ss_dssp ECEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHH
T ss_pred cceeecccccchhhhccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHH
Confidence 3479999999765 221 455554 455667887766542 11222345667
Q ss_pred HHHHHhCCCeEeeEEEE
Q 014031 120 IETARRFGMKIIPGVEI 136 (432)
Q Consensus 120 ~~~a~~~gi~vI~GiEi 136 (432)
.+++.+.|++.+.+...
T Consensus 167 ~~~~~~~g~r~~~~~~~ 183 (479)
T 3h4u_A 167 IGAAQRIGMRFHASRGA 183 (479)
T ss_dssp HHHHHHHTCEEEEEEEE
T ss_pred HHHHHHcCCEEEEEeee
Confidence 77778889988776544
No 46
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=40.90 E-value=5 Score=37.78 Aligned_cols=29 Identities=34% Similarity=0.566 Sum_probs=7.2
Q ss_pred cccccchhhhhhhccCCCCCCCCchHhhh
Q 014031 7 VEKRSKDKKKKKKQKRGGGKKKMTAEQSL 35 (432)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (432)
..||++|||+|++++.-+.+++++-++.+
T Consensus 113 LKKrdKKkkKk~~~~~k~~~~~~~~~~~~ 141 (232)
T 1914_A 113 LKKRDKKNKSKKSKPAQGGEQKLISEEDD 141 (232)
T ss_dssp SBCC-----------CCEEEEEC------
T ss_pred cCccccchhhhhhhhhhhhhhhhhhhhhc
Confidence 56777766666666555555666555443
No 47
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=40.76 E-value=22 Score=32.21 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=37.0
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeE
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (432)
.+.+|+|.|. .|+.+++.+.+.|.+.|.+-+-.......++.+.+++.|+.+
T Consensus 61 ~i~ld~~l~d-------~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 61 ILVCDMKTTD-------GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI 112 (218)
T ss_dssp EEEEEEEECS-------CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEeecc-------cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Confidence 5778998874 377899999999999998844322112456667777777755
No 48
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=40.51 E-value=68 Score=28.92 Aligned_cols=15 Identities=20% Similarity=0.067 Sum_probs=10.6
Q ss_pred CCHHHHHHHHHHcCC
Q 014031 251 PLAEVAVQLIHRTGG 265 (432)
Q Consensus 251 ~~~eeaI~~I~~aGG 265 (432)
.+++++++.++++|-
T Consensus 19 ~~~~~~l~~~~~~G~ 33 (272)
T 2q02_A 19 LSIEAFFRLVKRLEF 33 (272)
T ss_dssp SCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 467777777777764
No 49
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=39.32 E-value=40 Score=30.62 Aligned_cols=18 Identities=28% Similarity=0.643 Sum_probs=8.8
Q ss_pred HHHHHHHHHcCccEEEEe
Q 014031 279 AAIIRKLKDVGLHGLEVY 296 (432)
Q Consensus 279 ~~li~~L~~~GldGIEv~ 296 (432)
.+.++.++++|+++||+.
T Consensus 25 ~~~l~~~~~~G~~~vEl~ 42 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIY 42 (262)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEeec
Confidence 344444445555555554
No 50
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=38.30 E-value=18 Score=35.85 Aligned_cols=29 Identities=24% Similarity=0.171 Sum_probs=25.5
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCc
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (432)
..+++||+|- ||+++|+.+++.|++.|++
T Consensus 44 lPK~eLH~Hl---~gsl~~~~l~~la~~~~~~ 72 (371)
T 2pgf_A 44 IPKCELHCHL---DLCFSADFFVSCIRKYNLQ 72 (371)
T ss_dssp SCEEEEEEEG---GGCCCHHHHHHHHHHTTCC
T ss_pred CcHhhheeCC---ccCCCHHHHHHHHHHcCCC
Confidence 4578999998 7999999999999999863
No 51
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=38.10 E-value=63 Score=29.49 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=32.8
Q ss_pred cHHHHHHHHHcCccEEEEecCC------CcHHHHHHHHHHcCCeeEeC
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLGG 319 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~------~~~~~~~~lA~~~gLl~tgG 319 (432)
.++.++.+++.|+++||+.... ...+.+.++++++||-+++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 66 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCC 66 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEe
Confidence 4677888899999999998653 13457788999999987763
No 52
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=37.58 E-value=48 Score=30.89 Aligned_cols=14 Identities=14% Similarity=0.088 Sum_probs=7.7
Q ss_pred CCHHHHHHHHHHcC
Q 014031 251 PLAEVAVQLIHRTG 264 (432)
Q Consensus 251 ~~~eeaI~~I~~aG 264 (432)
.+++++++.+.++|
T Consensus 36 ~~~~~~l~~a~~~G 49 (296)
T 2g0w_A 36 VSFPKRVKVAAENG 49 (296)
T ss_dssp SCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 35555555555555
No 53
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=37.52 E-value=26 Score=32.28 Aligned_cols=17 Identities=24% Similarity=0.591 Sum_probs=8.1
Q ss_pred HHHHHHHHcCccEEEEe
Q 014031 280 AIIRKLKDVGLHGLEVY 296 (432)
Q Consensus 280 ~li~~L~~~GldGIEv~ 296 (432)
+.++.++++|++|||++
T Consensus 19 ~~l~~~~~~G~~~vEl~ 35 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELW 35 (286)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhCCCEEEEc
Confidence 34444444555555543
No 54
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=37.48 E-value=32 Score=31.74 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=31.9
Q ss_pred cHHHHHHHHHcCccEEEEecCC------CcHHHHHHHHHHcCCeeEe
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~------~~~~~~~~lA~~~gLl~tg 318 (432)
....++.++++|+++||+.... ...+.+.++++++||-+++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 4677888888999999998532 2356778889999998877
No 55
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=36.17 E-value=46 Score=31.31 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=32.4
Q ss_pred cHHHHHHHHHcCccEEEEec-----C-CCcHHHHHHHHHHcCCeeEe
Q 014031 278 PAAIIRKLKDVGLHGLEVYR-----S-DGKLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~-----~-~~~~~~~~~lA~~~gLl~tg 318 (432)
.+..++.++++|+++||++. . ..+.+.+.++++++||-+++
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~ 77 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIIS 77 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEE
Confidence 45678888999999999975 1 23577888999999998754
No 56
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=36.07 E-value=40 Score=30.34 Aligned_cols=44 Identities=5% Similarity=-0.065 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEe
Q 014031 87 YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (432)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI 131 (432)
..++++.++.+++.|++.|-+.-... ....++.+.+++.||.+.
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~ 57 (260)
T 1k77_A 14 EVPFIERFAAARKAGFDAVEFLFPYN-YSTLQIQKQLEQNHLTLA 57 (260)
T ss_dssp TSCGGGHHHHHHHHTCSEEECSCCTT-SCHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC-CCHHHHHHHHHHcCCceE
Confidence 47899999999999999999975322 246778888888988874
No 57
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=35.55 E-value=59 Score=29.36 Aligned_cols=15 Identities=13% Similarity=0.240 Sum_probs=9.8
Q ss_pred CCHHHHHHHHHHcCC
Q 014031 251 PLAEVAVQLIHRTGG 265 (432)
Q Consensus 251 ~~~eeaI~~I~~aGG 265 (432)
.+++++++.++++|-
T Consensus 14 ~~~~~~l~~~~~~G~ 28 (278)
T 1i60_A 14 SNLKLDLELCEKHGY 28 (278)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhCC
Confidence 466677777777663
No 58
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=35.50 E-value=55 Score=32.72 Aligned_cols=22 Identities=18% Similarity=-0.040 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCC
Q 014031 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~V--LAHP~~ 274 (432)
...+++.||+.|+.++ |.|+++
T Consensus 98 ~k~l~davH~~G~~i~~QL~H~Gr 121 (400)
T 4gbu_A 98 WTKIFNAIHEKKSFVWVQLAVLGW 121 (400)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEEeeeecCc
Confidence 4678899999999876 468764
No 59
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=35.08 E-value=44 Score=30.76 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=39.6
Q ss_pred eEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC----CCCHHHHHHHHHhCCCeEee
Q 014031 74 VFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT----MSGIPEAIETARRFGMKIIP 132 (432)
Q Consensus 74 ~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt----~~g~~~~~~~a~~~gi~vI~ 132 (432)
++-+|+.+...+-..++++.++.+++.|++.|-|....- -....++.+.+++.||.+..
T Consensus 3 kigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 333444433333335899999999999999999985431 11245667777889988744
No 60
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=34.52 E-value=61 Score=29.35 Aligned_cols=59 Identities=7% Similarity=0.005 Sum_probs=41.3
Q ss_pred CCceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC---C--CCHHHHHHHHHhCCCeEe
Q 014031 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT---M--SGIPEAIETARRFGMKII 131 (432)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt---~--~g~~~~~~~a~~~gi~vI 131 (432)
...|++-+++.|.. ..++++.++.+++.|++.|=+....- . ....++.+.+++.||.+.
T Consensus 15 ~~~~klg~~~~~~~---~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 15 VNPFHLGMAGYTFV---NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp CCSSEEEECGGGGT---TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCceEEEEEEEeec---CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 44566655555543 25899999999999999999986521 1 123566777788998764
No 61
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=34.06 E-value=53 Score=30.29 Aligned_cols=42 Identities=19% Similarity=0.138 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCccEEEEecCC---CcHHHHHHHHHHcCCee-EeCC
Q 014031 279 AAIIRKLKDVGLHGLEVYRSD---GKLVAYTDLADTYGLLK-LGGS 320 (432)
Q Consensus 279 ~~li~~L~~~GldGIEv~~~~---~~~~~~~~lA~~~gLl~-tgGS 320 (432)
++.++.++++|+++||+.... .+.+.+.++++++||-+ +.+.
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEEEec
Confidence 566777888999999998653 35678889999999977 4444
No 62
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=33.97 E-value=34 Score=31.52 Aligned_cols=64 Identities=11% Similarity=-0.025 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHcCCEEE-EeCCCCCCCcHHHHHHHHHcCccEEEEecCCC-----------cHHHHHHHHHHcCCe
Q 014031 250 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLL 315 (432)
Q Consensus 250 ~~~~eeaI~~I~~aGGi~V-LAHP~~~~~~~~li~~L~~~GldGIEv~~~~~-----------~~~~~~~lA~~~gLl 315 (432)
..+++++++.++++|--.| +.+++. ....+-+.+.+.|+.-.-++.+.. ......++|.+.|..
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 105 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAP 105 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999985544 335543 445555667778876443322211 123456788888764
No 63
>1u60_A Probable glutaminase YBAS; structural genomics, APC5046, PSI, protein structure initiat midwest center for structural genomics, MCSG; 1.61A {Escherichia coli} SCOP: e.3.1.2
Probab=33.12 E-value=1.2e+02 Score=29.53 Aligned_cols=60 Identities=17% Similarity=0.078 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHHHHHHHHcCccc-cHHHHHHHHhh
Q 014031 178 GRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVE-NLKQAFARYLY 239 (432)
Q Consensus 178 ~R~~r~~~mv~kL~~~g~~i~~eev~~~~g~~~~~gr~hia~aLv~~G~~~-~~~~af~~yl~ 239 (432)
.|.++...++.+|....+.++.+-....... .--..-||.+|...|++. +..++-+-|+.
T Consensus 134 ~~~~~il~~~~~lag~~l~~d~~v~~SE~~t--~~rN~AiA~~lks~g~i~~dv~~~Ld~Yf~ 194 (310)
T 1u60_A 134 QRWQRILHIQQQLAGEQVALSDEVNQSEQTT--NFHNRAIAWLLYSAGYLYCDAMEACDVYTR 194 (310)
T ss_dssp HHHHHHHHHHHHHHCTTCEECHHHHHHHHTT--CHHHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccCHHHHHHHHhh--hHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence 3444555556666644444442221111111 112356777888999887 66666665553
No 64
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=33.00 E-value=22 Score=32.97 Aligned_cols=56 Identities=7% Similarity=-0.024 Sum_probs=37.5
Q ss_pred ceeEcceeeCcCCC------------CCCCHHHHHHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhCC
Q 014031 72 NVVFELHSHSNFSD------------GYLSPSKLVERAHCNGVKVLALTDHD-TMSGIPEAIETARRFG 127 (432)
Q Consensus 72 ~~~vDLH~HT~~SD------------G~~sp~elv~~A~~~Gl~~iaITDHd-t~~g~~~~~~~a~~~g 127 (432)
.+.+|.|+|-.... ...+++++++.+.+.|++...+.--. .......+.+.+++.+
T Consensus 12 ~~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p 80 (288)
T 2ffi_A 12 LTAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVP 80 (288)
T ss_dssp CCCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHST
T ss_pred CCceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCC
Confidence 46899999975321 14689999999999999977766421 1122344556666653
No 65
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=32.42 E-value=74 Score=31.38 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=40.0
Q ss_pred ceeEcceeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 014031 72 NVVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIE 121 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (432)
+-.||.|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+
T Consensus 86 PGlID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 161 (468)
T 3lnp_A 86 PGWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFA--DMY--FYPQQSGE 161 (468)
T ss_dssp ECEEECSCCGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--ECC--SCHHHHHH
T ss_pred eCeechhhChhhhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 3479999999543 22 2566654 4456788987665 552 22355667
Q ss_pred HHHhCCCeEeeEEEEE
Q 014031 122 TARRFGMKIIPGVEIS 137 (432)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (432)
++.+.|++.+.+..+.
T Consensus 162 ~~~~~g~r~~~~~~~~ 177 (468)
T 3lnp_A 162 AALAAGIRAVCFAPVL 177 (468)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEecccc
Confidence 7778899887776654
No 66
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=32.16 E-value=88 Score=29.29 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecC-CCC---------CCHHHHHHHHHhCCCeE
Q 014031 87 YLSPSKLVERAHCNGVKVLALTDH-DTM---------SGIPEAIETARRFGMKI 130 (432)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaITDH-dt~---------~g~~~~~~~a~~~gi~v 130 (432)
..++++.++.|++.|++.|-|.-. ..+ ....++.+.+++.||.+
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 67 (340)
T 2zds_A 14 DLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKC 67 (340)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeE
Confidence 578999999999999999999853 112 12456777888888877
No 67
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=31.98 E-value=64 Score=28.39 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEE
Q 014031 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (432)
Q Consensus 88 ~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~Gi 134 (432)
.++++ ++.|.+.|.|+| +..... .++.+.+++.|+.++||+
T Consensus 71 ~~~~~-~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 71 TSVEQ-CRKAVESGAEFI-VSPHLD----EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp CSHHH-HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHTCEEECEE
T ss_pred CCHHH-HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcCCcEECCc
Confidence 35766 588889999999 765432 567788888999999975
No 68
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=31.97 E-value=90 Score=28.05 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe-cCC-----CCCCHHHHHHHHHhCCCeEe
Q 014031 87 YLSPSKLVERAHCNGVKVLALT-DHD-----TMSGIPEAIETARRFGMKII 131 (432)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaIT-DHd-----t~~g~~~~~~~a~~~gi~vI 131 (432)
..++++.++.+++.|++.|-+. -.. .-....++.+.+++.||.+.
T Consensus 13 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 63 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPL 63 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCee
Confidence 3789999999999999999998 432 22456778888888988764
No 69
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=31.87 E-value=50 Score=31.43 Aligned_cols=40 Identities=20% Similarity=0.133 Sum_probs=30.1
Q ss_pred cHHHHHHHHHc-CccEEEEecCC---CcHHHHHHHHHHcCCeeE
Q 014031 278 PAAIIRKLKDV-GLHGLEVYRSD---GKLVAYTDLADTYGLLKL 317 (432)
Q Consensus 278 ~~~li~~L~~~-GldGIEv~~~~---~~~~~~~~lA~~~gLl~t 317 (432)
..+.++.+++. |+++||+..+. .+.+.+.++++++||-++
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~ 78 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAI 78 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEE
Confidence 35677778888 88999986554 356778888888888765
No 70
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=31.55 E-value=30 Score=32.18 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=23.6
Q ss_pred eeEcceeeCcCCC------------------CCCCHHHHHHHHHHcCCcEEEEe
Q 014031 73 VVFELHSHSNFSD------------------GYLSPSKLVERAHCNGVKVLALT 108 (432)
Q Consensus 73 ~~vDLH~HT~~SD------------------G~~sp~elv~~A~~~Gl~~iaIT 108 (432)
+.+|.|+|-...+ ...+++++++.+.+.|++...++
T Consensus 2 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~ 55 (307)
T 2f6k_A 2 SKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILS 55 (307)
T ss_dssp CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 4799999975321 12566777777777777765554
No 71
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=31.46 E-value=63 Score=29.64 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCccEEEEecCCC------cHHHHHHHHHHcCCeeEeC-CCCCC
Q 014031 279 AAIIRKLKDVGLHGLEVYRSDG------KLVAYTDLADTYGLLKLGG-SDYHG 324 (432)
Q Consensus 279 ~~li~~L~~~GldGIEv~~~~~------~~~~~~~lA~~~gLl~tgG-SDfHg 324 (432)
++.++.++++|+++||+..... ..+.+.+.++++||-+++. ..+++
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g 76 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDG 76 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTT
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCC
Confidence 4578888999999999986432 2567888999999977654 34443
No 72
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=30.88 E-value=1e+02 Score=27.65 Aligned_cols=45 Identities=13% Similarity=0.114 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhCCCeE
Q 014031 86 GYLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKI 130 (432)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHd------t~~g~~~~~~~a~~~gi~v 130 (432)
...++++.++.+++.|++.|-+.... .-....++.+.+++.||.+
T Consensus 17 ~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 17 PGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 35689999999999999999997421 1245677888888898876
No 73
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=30.87 E-value=46 Score=32.23 Aligned_cols=60 Identities=17% Similarity=0.140 Sum_probs=38.3
Q ss_pred eeEcceeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCC-----CCHHHHHHHHHhCC-CeEee
Q 014031 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTM-----SGIPEAIETARRFG-MKIIP 132 (432)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt~-----~g~~~~~~~a~~~g-i~vI~ 132 (432)
-.+|.|+|...+ +-..++....+.+.+.|+..+..+-+... ..+..+.+.+++.+ +.+++
T Consensus 50 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (426)
T 2z00_A 50 GFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHP 117 (426)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECC
T ss_pred CEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEE
Confidence 379999998764 12245778889999999998876532111 12344555556666 66543
No 74
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=30.76 E-value=59 Score=29.69 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCC----CHHHHHHHHHhCCCeEee
Q 014031 88 LSPSKLVERAHCNGVKVLALTDHDTMS----GIPEAIETARRFGMKIIP 132 (432)
Q Consensus 88 ~sp~elv~~A~~~Gl~~iaITDHdt~~----g~~~~~~~a~~~gi~vI~ 132 (432)
.++++.++.+++.|++.|-|.-.+... ...++.+.+++.||.+..
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 579999999999999999998654322 345666777888888754
No 75
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=30.53 E-value=62 Score=30.50 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=8.4
Q ss_pred HHHHHHHHcCccEEEEe
Q 014031 280 AIIRKLKDVGLHGLEVY 296 (432)
Q Consensus 280 ~li~~L~~~GldGIEv~ 296 (432)
+.++.++++|+++||++
T Consensus 40 ~~l~~aa~~G~~~VEl~ 56 (305)
T 3obe_A 40 NGLNRLAKAGYTDLEIF 56 (305)
T ss_dssp HHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHcCCCEEEec
Confidence 34444445555555554
No 76
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=30.30 E-value=76 Score=31.09 Aligned_cols=47 Identities=13% Similarity=0.183 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEEE
Q 014031 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEI 136 (432)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEi 136 (432)
|-.-+|+++++..+..|++.|=|-|=| +.++.+++..||.++.|+-.
T Consensus 12 ~nlp~p~~Vv~llks~gi~~VRlY~~D-----~~vL~Al~~sgi~V~lGV~n 58 (323)
T 3ur8_A 12 NNLPSDQDVIKLYNANNIKKMRIYYPH-----TNVFNALKGSNIEIILDVPN 58 (323)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTCCCEEEEEECG
T ss_pred CCCCCHHHHHHHHHhCCCCeEEecCCC-----HHHHHHHHhcCCeEEEeccc
Confidence 445689999999999999999998766 57778888899999999864
No 77
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=29.94 E-value=64 Score=29.77 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=30.2
Q ss_pred cHHHHHHHHHcCccEEEEecCCC------------cHHHHHHHHHHcCCeeEe
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSDG------------KLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~~------------~~~~~~~lA~~~gLl~tg 318 (432)
.++.++.+++.|+++||+..... ..+.+.++++++||-+++
T Consensus 32 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 32 WLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 46677888889999999975431 234677888999997754
No 78
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=29.72 E-value=94 Score=29.06 Aligned_cols=42 Identities=29% Similarity=0.354 Sum_probs=31.4
Q ss_pred CcHHHHHHHHHcCccEEEEecC-C--C---------cHHHHHHHHHHcCCeeEe
Q 014031 277 NPAAIIRKLKDVGLHGLEVYRS-D--G---------KLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 277 ~~~~li~~L~~~GldGIEv~~~-~--~---------~~~~~~~lA~~~gLl~tg 318 (432)
..++.++.++++|+++||+... . . ..+.+.++++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 3467788889999999999752 1 1 145778899999997754
No 79
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=29.52 E-value=93 Score=29.14 Aligned_cols=59 Identities=14% Similarity=0.250 Sum_probs=37.0
Q ss_pred HHHHHHHHcC-CEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecCC-CcHHHHHHHHHHcCC
Q 014031 255 VAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGL 314 (432)
Q Consensus 255 eaI~~I~~aG-Gi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~~-~~~~~~~~lA~~~gL 314 (432)
++|+.|++.. -+++-+|-. ..+++..++.+.++|.|.|-+.... ....+..+.++++|+
T Consensus 75 ~~v~~lr~~~p~~~ldvHLm-v~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~ 135 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLM-VKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGI 135 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEE-CSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTS
T ss_pred HHHHHHHHhCCCCeEEEEEe-eCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCC
Confidence 5667777666 566677664 3345666777777777777775532 234556666666665
No 80
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=29.33 E-value=27 Score=31.75 Aligned_cols=15 Identities=20% Similarity=-0.013 Sum_probs=8.5
Q ss_pred CCHHHHHHHHHHcCC
Q 014031 251 PLAEVAVQLIHRTGG 265 (432)
Q Consensus 251 ~~~eeaI~~I~~aGG 265 (432)
.+++++++.++++|-
T Consensus 18 ~~~~~~l~~~~~~G~ 32 (275)
T 3qc0_A 18 CGFAEAVDICLKHGI 32 (275)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 355666666666553
No 81
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=29.27 E-value=70 Score=30.31 Aligned_cols=66 Identities=9% Similarity=0.082 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCEEEEeCCCC-----CCCcHHHHHHHHHcCccEEEEecCCC-----cHHHHHHHHHHcCCeeEe
Q 014031 253 AEVAVQLIHRTGGLAVLAHPWA-----LKNPAAIIRKLKDVGLHGLEVYRSDG-----KLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~VLAHP~~-----~~~~~~li~~L~~~GldGIEv~~~~~-----~~~~~~~lA~~~gLl~tg 318 (432)
+.|-|++.|++|=.+..-..+. ....++.++..++.|++.||+....- +...+.+.+.+.||.+..
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 6788888888886655544211 12346778888999999999998652 345677888899987643
No 82
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=28.90 E-value=55 Score=33.43 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=41.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCcEEEEe---------------cCCCCC------CHHHHHHHHHhCCCeEeeEEEEEE
Q 014031 83 FSDGYLSPSKLVERAHCNGVKVLALT---------------DHDTMS------GIPEAIETARRFGMKIIPGVEIST 138 (432)
Q Consensus 83 ~SDG~~sp~elv~~A~~~Gl~~iaIT---------------DHdt~~------g~~~~~~~a~~~gi~vI~GiEis~ 138 (432)
|.--.+.|++.++.|++.|++.+.+| ||+.+. =+.++.++|++.||++ |+=+|.
T Consensus 73 F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~--GlY~S~ 147 (450)
T 2wvv_A 73 WNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDV--HFYFSV 147 (450)
T ss_dssp CCCTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEE--EEEEES
T ss_pred CCcccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeE--EEEecH
Confidence 33456899999999999999999987 443331 1467888999999887 766665
No 83
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=28.84 E-value=65 Score=31.53 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=39.7
Q ss_pred ceeEcceeeCcCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 014031 72 NVVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIE 121 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~e-------lv~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (432)
+=.+|.|+|...+ .| ..++++ .+..+.+.|+..+. |+. .....+.+
T Consensus 66 PG~ID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 141 (451)
T 4dyk_A 66 PGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFS--DMY--FYPQAICG 141 (451)
T ss_dssp ECEEECCCCGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHH
T ss_pred ecccchhhChhhHHhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 3479999999543 11 255664 34455688987765 552 23455667
Q ss_pred HHHhCCCeEeeEEEEE
Q 014031 122 TARRFGMKIIPGVEIS 137 (432)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (432)
++.+.|++.+.+..+.
T Consensus 142 a~~~~g~r~~~~~~~~ 157 (451)
T 4dyk_A 142 VVHDSGVRAQVAIPVL 157 (451)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEEchhh
Confidence 7777899888776654
No 84
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=28.83 E-value=25 Score=31.26 Aligned_cols=27 Identities=15% Similarity=-0.167 Sum_probs=22.2
Q ss_pred CCCC-HHHHHHHHHHcCCcEEEEec-CCC
Q 014031 86 GYLS-PSKLVERAHCNGVKVLALTD-HDT 112 (432)
Q Consensus 86 G~~s-p~elv~~A~~~Gl~~iaITD-Hdt 112 (432)
|... |-+++..|+++|+++|+||- ..+
T Consensus 88 g~n~~~ie~A~~ake~G~~vIaITs~~~~ 116 (170)
T 3jx9_A 88 TERSDLLASLARYDAWHTPYSIITLGDVT 116 (170)
T ss_dssp SCCHHHHHHHHHHHHHTCCEEEEESSCCC
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCcchh
Confidence 4444 78999999999999999998 444
No 85
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=28.56 E-value=28 Score=32.82 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=25.6
Q ss_pred eeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCC
Q 014031 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHD 111 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHd 111 (432)
|.+|-|||..... . +.+++|++.|++.+.++-.+
T Consensus 1 m~iDtH~Hld~~~----~-~~l~~a~~~GV~~~i~~~~~ 34 (261)
T 3guw_A 1 MYFDSHLHSEGLG----F-SELVKLKENGIKEVCSLAFF 34 (261)
T ss_dssp -CCBCCCCGGGCC----H-HHHHHHHTTSCCEECCBCCC
T ss_pred CeEEeccCCCCCC----h-HHHHHHHHCCCcEEEEeccC
Confidence 5789999987532 1 35899999999998876554
No 86
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=28.42 E-value=1e+02 Score=30.02 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=39.8
Q ss_pred ceeEcceeeCcCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 014031 72 NVVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIE 121 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~e-------lv~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (432)
+-.+|.|+|...+ .| ..++++ .+..+.+.|+..+. |+ ......+.+
T Consensus 64 PGlID~H~Hl~~~~~~g~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~--~~~~~~~~~ 139 (447)
T 4f0r_A 64 PGLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTIN--DM--YFYNAAVAR 139 (447)
T ss_dssp ECEEEEEECGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EC--BSCHHHHHH
T ss_pred eCccchhhChhhHhhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ec--ccCHHHHHH
Confidence 4479999999543 12 255664 34557779988776 33 223455667
Q ss_pred HHHhCCCeEeeEEEEE
Q 014031 122 TARRFGMKIIPGVEIS 137 (432)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (432)
++.+.|+..+.+..+.
T Consensus 140 ~~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 140 AGLASGMRTFVGCSIL 155 (447)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEEchhc
Confidence 7777888887776653
No 87
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=28.38 E-value=98 Score=28.11 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=41.8
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecCC-CcHHHHHHHHHHc-CCee
Q 014031 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTY-GLLK 316 (432)
Q Consensus 255 eaI~~I~~aGGi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~~-~~~~~~~~lA~~~-gLl~ 316 (432)
+.++.+...+=++|+-... .....++++.+.+.|++.||+-... ...+.+.++++++ ++++
T Consensus 8 ~~~~~l~~~~~i~v~r~~~-~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~v 70 (214)
T 1wbh_A 8 SAESILTTGPVVPVIVVKK-LEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIV 70 (214)
T ss_dssp CHHHHHHSCSEEEEECCSS-GGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHCCEEEEEECCC-HHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEE
Confidence 4667788888889997652 2223467888889999999997644 3345555677776 3443
No 88
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=28.09 E-value=85 Score=31.24 Aligned_cols=62 Identities=13% Similarity=0.242 Sum_probs=40.2
Q ss_pred ceeEcceeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 014031 72 NVVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIE 121 (432)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (432)
+-.||.|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+
T Consensus 73 PGlID~H~Hl~~~~~~g~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 148 (472)
T 4dzh_A 73 PGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVN--ENY--FFADVQAA 148 (472)
T ss_dssp ECEEEEEECGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHH
T ss_pred ECccccccChhhHHhccccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 3479999999764 12 1444443 3347888988765 554 23455667
Q ss_pred HHHhCCCeEeeEEEEE
Q 014031 122 TARRFGMKIIPGVEIS 137 (432)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (432)
++.+.|++.+.+..+.
T Consensus 149 a~~~~g~r~~~~~~~~ 164 (472)
T 4dzh_A 149 VYKQHGFRALVGAVII 164 (472)
T ss_dssp HHHHTTCEEEEEEEEC
T ss_pred HHHHhCCeEEEEeccc
Confidence 7778899888776653
No 89
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=27.71 E-value=95 Score=30.07 Aligned_cols=22 Identities=18% Similarity=0.122 Sum_probs=16.3
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCC
Q 014031 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~V--LAHP~~ 274 (432)
...+++.+|+.|+.++ |.|.++
T Consensus 85 ~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 85 FAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEecCCCc
Confidence 4677889999998654 678643
No 90
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=27.68 E-value=1e+02 Score=30.46 Aligned_cols=23 Identities=22% Similarity=0.154 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 014031 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (432)
Q Consensus 252 ~~eeaI~~I~~aGGi~V--LAHP~~ 274 (432)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 80 GWNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCEEEEEeccCcc
Confidence 34577888999988765 567654
No 91
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=27.38 E-value=61 Score=29.90 Aligned_cols=45 Identities=9% Similarity=0.063 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCC----------CCCHHHHHHHHHhCCCeE
Q 014031 86 GYLSPSKLVERAHCNGVKVLALTDHDT----------MSGIPEAIETARRFGMKI 130 (432)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt----------~~g~~~~~~~a~~~gi~v 130 (432)
+..++++.++.+++.|++.|-|.-... .....++.+.+++.||.+
T Consensus 28 ~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 82 (295)
T 3cqj_A 28 AGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRV 82 (295)
T ss_dssp CCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEE
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeE
Confidence 457999999999999999999975432 112345667778888876
No 92
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=27.11 E-value=83 Score=26.48 Aligned_cols=38 Identities=29% Similarity=0.272 Sum_probs=29.7
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEe
Q 014031 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (432)
Q Consensus 91 ~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI 131 (432)
.++++.+.+.|+..+.++... ...++.+.+++.|+.++
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g~---~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYNT---YNREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTTC---CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEECCCc---hHHHHHHHHHHcCCEEE
Confidence 467888999999999876432 25778888899999876
No 93
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=27.04 E-value=1.1e+02 Score=30.31 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=15.9
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCC
Q 014031 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~V--LAHP~~ 274 (432)
...+++.||+.|+.++ |.|+++
T Consensus 89 ~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 89 WRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEeeccCCc
Confidence 4577888898888765 467654
No 94
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=26.83 E-value=80 Score=28.71 Aligned_cols=39 Identities=5% Similarity=0.170 Sum_probs=29.9
Q ss_pred CcHHHHHHHHHcCccEEEEecCC-----------CcHHHHHHHHHHcCCe
Q 014031 277 NPAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGLL 315 (432)
Q Consensus 277 ~~~~li~~L~~~GldGIEv~~~~-----------~~~~~~~~lA~~~gLl 315 (432)
.....++.+++.|+++||++... ...+.+.++++++||-
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 62 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGID 62 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCC
Confidence 45678888999999999997521 1345678889999996
No 95
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=26.55 E-value=20 Score=37.97 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=39.4
Q ss_pred eeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCC------CCHHHHHHHHHhCCCeEeeE
Q 014031 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTM------SGIPEAIETARRFGMKIIPG 133 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~------~g~~~~~~~a~~~gi~vI~G 133 (432)
-.+|.|+|... +..+++++.+.|...|+..+.. |.++. .++..+.+.++..++.+.+.
T Consensus 90 G~ID~H~Hl~~--~~~~~~~~~~~al~~GvTtvv~-~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~ 153 (608)
T 3nqb_A 90 GLIDTHMHIES--SMITPAAYAAAVVARGVTTIVW-DPHEFGNVHGVDGVRWAAKAIENLPLRAILL 153 (608)
T ss_dssp CEEEEEECGGG--GTSCHHHHHHHHHTTTEEEEEE-CCHHHHHHHTHHHHHHHHHHHTTCSSEEEEE
T ss_pred CeEecccCccc--ccCCHHHHHHHHHhCCeEEEEc-CCccccccCCHHHHHHHHHHhhhcCcEEEEe
Confidence 47999999864 3468999999999999988764 33322 23344455555566665543
No 96
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=26.50 E-value=64 Score=32.28 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=26.0
Q ss_pred HHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCeEeeEEEE
Q 014031 94 VERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (432)
Q Consensus 94 v~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vI~GiEi 136 (432)
+..+.+.|+..+.-. +++. ..+..+.+++++.|++++.|..+
T Consensus 124 ~~~~l~~GvTtv~~~-~~~~~~~~~~~~~~~~~~g~r~~~g~~~ 166 (475)
T 2ood_A 124 LDALLAAGTTTCQAF-TSSSPVATEELFEEASRRNMRVIAGLTG 166 (475)
T ss_dssp HHHHHHTTEEEEEEE-CCSSHHHHHHHHHHHHHHTCCEEECCEE
T ss_pred HHHHHhcCceEEEEe-cccCchhHHHHHHHHHHcCCeEEEEeee
Confidence 678889998887753 2211 12344556666778887766543
No 97
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=26.44 E-value=1.5e+02 Score=26.76 Aligned_cols=61 Identities=20% Similarity=0.068 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHcCCEEEEeCCCCC---CCcHHHHHHHHHc-CccEEEEecCCCcHHHHHHHHHHcCCee
Q 014031 250 EPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDV-GLHGLEVYRSDGKLVAYTDLADTYGLLK 316 (432)
Q Consensus 250 ~~~~eeaI~~I~~aGGi~VLAHP~~~---~~~~~li~~L~~~-GldGIEv~~~~~~~~~~~~lA~~~gLl~ 316 (432)
-.+++++++.++++|=.+++ ||+.. .....-++.|+.. ++|||=-.. ......|++.||..
T Consensus 40 i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk-----~~~i~~Ak~~gL~t 104 (192)
T 3kts_A 40 VAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIISTR-----GNAIMKAKQHKMLA 104 (192)
T ss_dssp TTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEESC-----HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEeCc-----HHHHHHHHHCCCeE
Confidence 46789999999999998888 99743 3445566667653 677753332 33566777888764
No 98
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=25.61 E-value=1.3e+02 Score=30.68 Aligned_cols=53 Identities=21% Similarity=0.350 Sum_probs=40.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCcEEEEe-cC--------------CCCC------CHHHHHHHHHhCCCeEeeEEEEE
Q 014031 83 FSDGYLSPSKLVERAHCNGVKVLALT-DH--------------DTMS------GIPEAIETARRFGMKIIPGVEIS 137 (432)
Q Consensus 83 ~SDG~~sp~elv~~A~~~Gl~~iaIT-DH--------------dt~~------g~~~~~~~a~~~gi~vI~GiEis 137 (432)
|.-..+.|++.++.|++.|++.+.+| -| |++. =+.++.++|++.||++ |+=++
T Consensus 100 F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~--GlY~S 173 (455)
T 2zxd_A 100 FTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF--GVYYS 173 (455)
T ss_dssp CCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE--EEEEE
T ss_pred CCcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeE--EEEec
Confidence 33567899999999999999999987 22 2221 1467889999999988 66555
No 99
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=25.58 E-value=77 Score=28.76 Aligned_cols=13 Identities=15% Similarity=0.261 Sum_probs=6.6
Q ss_pred HHHHHHHHHHcCC
Q 014031 253 AEVAVQLIHRTGG 265 (432)
Q Consensus 253 ~eeaI~~I~~aGG 265 (432)
++++++.+.++|-
T Consensus 25 ~~~~l~~a~~~G~ 37 (264)
T 1yx1_A 25 QASFLPLLAMAGA 37 (264)
T ss_dssp GGGGHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 3455555555543
No 100
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.54 E-value=1.1e+02 Score=26.29 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCC--CCHHHHHHHHHhCC---CeEeeE
Q 014031 85 DGYLSPSKLVERAHCNGVKVLALTDHDTM--SGIPEAIETARRFG---MKIIPG 133 (432)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~--~g~~~~~~~a~~~g---i~vI~G 133 (432)
....+++++++.|++.+.+.|+++=-.+. ....++.+..++.+ ++++.|
T Consensus 53 G~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vG 106 (161)
T 2yxb_A 53 GLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLG 106 (161)
T ss_dssp CSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 44579999999999999999999865543 22344445555543 666655
No 101
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=25.25 E-value=92 Score=30.38 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=39.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEE
Q 014031 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (432)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiE 135 (432)
|-.-+|.++++..+..|++.|=|-|-| ..++++++..||.++.|+-
T Consensus 11 ~nlp~p~~vv~llks~gi~~VRlYdaD-----~~vL~Al~~sgi~v~vGV~ 56 (316)
T 3em5_A 11 NNLPPVSEVIALYKKSNITRMRIYDPN-----QAVLEALRGSNIELILGVP 56 (316)
T ss_dssp TTCCCHHHHHHHHHHTTCCEEECSSCC-----HHHHHHHTTCCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEecCC-----HHHHHHhhcCCceEEEecc
Confidence 445689999999999999999998765 4577888889999999985
No 102
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=24.49 E-value=73 Score=29.65 Aligned_cols=41 Identities=20% Similarity=0.393 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEEE
Q 014031 90 PSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (432)
Q Consensus 90 p~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiE 135 (432)
-.+-++.|.+.|.++|. +.+. ..+..++|++.|+.++||+-
T Consensus 95 t~~~a~~Ai~AGA~fIv-sP~~----~~~vi~~~~~~gi~~ipGv~ 135 (232)
T 4e38_A 95 NGEQALAAKEAGATFVV-SPGF----NPNTVRACQEIGIDIVPGVN 135 (232)
T ss_dssp SHHHHHHHHHHTCSEEE-CSSC----CHHHHHHHHHHTCEEECEEC
T ss_pred CHHHHHHHHHcCCCEEE-eCCC----CHHHHHHHHHcCCCEEcCCC
Confidence 37789999999999996 3432 36677888889999999954
No 103
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=24.35 E-value=1e+02 Score=28.14 Aligned_cols=46 Identities=9% Similarity=-0.034 Sum_probs=36.8
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeE
Q 014031 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPG 133 (432)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~G 133 (432)
...++++.++.+++.|++.|-+..... ...++.+.+++.||.+...
T Consensus 29 ~~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 29 KDNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp TTCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEE
T ss_pred cCCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEE
Confidence 357899999999999999999984332 5677888888899887543
No 104
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=24.17 E-value=2.3e+02 Score=25.87 Aligned_cols=59 Identities=19% Similarity=0.125 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecCCC-cHHHHHHHHHHc
Q 014031 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTY 312 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~~~-~~~~~~~lA~~~ 312 (432)
..+.++.+...+=++|+-... .....++++.+.+.|++.||+-.... ..+.+.++++++
T Consensus 16 ~~~~~~~l~~~~ii~V~r~~~-~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~ 75 (225)
T 1mxs_A 16 AARIDAICEKARILPVITIAR-EEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQR 75 (225)
T ss_dssp HHHHHHHHHHHSEEEEECCSC-GGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEEEeCCC-HHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhC
Confidence 456778888899899987652 22334678888899999999976443 234455577776
No 105
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=24.15 E-value=1.1e+02 Score=30.18 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=15.5
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCC
Q 014031 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~V--LAHP~~ 274 (432)
...+++.||+.|+.++ |.|+++
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~Gr 116 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVGR 116 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeecCCC
Confidence 4567788899998754 577543
No 106
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=23.92 E-value=4.8e+02 Score=24.92 Aligned_cols=63 Identities=22% Similarity=0.184 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHcCCEE--EEeCCCCC---CCcHHHHHHHH---HcCccEEEEecCCCcH---HHHHHHHHHcCC
Q 014031 251 PLAEVAVQLIHRTGGLA--VLAHPWAL---KNPAAIIRKLK---DVGLHGLEVYRSDGKL---VAYTDLADTYGL 314 (432)
Q Consensus 251 ~~~eeaI~~I~~aGGi~--VLAHP~~~---~~~~~li~~L~---~~GldGIEv~~~~~~~---~~~~~lA~~~gL 314 (432)
....+.|+.|++.+++. |.++|..- .+.+..+..|+ ++|.+.+=.= ...+. ..|.+.|++.|+
T Consensus 130 ~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ-~ffD~~~~~~f~~~~r~~Gi 203 (304)
T 3fst_A 130 MYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQ-FFFDVESYLRFRDRCVSAGI 203 (304)
T ss_dssp CCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEEC-CCSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeC-ccCCHHHHHHHHHHHHhcCC
Confidence 56789999999888764 56655421 22333455553 5788864331 11233 345555666553
No 107
>2pby_A Glutaminase; secsg, riken, structural genomics, PSI, protein structure initiative, riken structural genomics/proteomics initiative, RSGI; 2.07A {Geobacillus kaustophilus}
Probab=23.85 E-value=5e+02 Score=25.11 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHHhC-CCCCCHHHHHHHhCCCCCCChHHHHHHHHHcCccc-cHHHHHHHH
Q 014031 178 GRFLRAKDMILKLNKL-KLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVE-NLKQAFARY 237 (432)
Q Consensus 178 ~R~~r~~~mv~kL~~~-g~~i~~eev~~~~g~~~~~gr~hia~aLv~~G~~~-~~~~af~~y 237 (432)
.|.++...++.+|... .+.++.+-....... .--..-||.+|...|+++ +..++-+-|
T Consensus 133 ~r~~~il~~~~~lag~~~i~~d~~v~~SE~~t--~~rN~AlA~~lks~g~i~~dv~~~Ld~Y 192 (308)
T 2pby_A 133 ERLERLLAFVRRLAGNERISYSDEVARSEFET--AFLNRSLCYFLKQHRIIDEDVEELMELY 192 (308)
T ss_dssp HHHHHHHHHHHHHHTCTTCCBCHHHHHHHHHH--CHHHHHHHHHHHHTTSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCccCHHHHHHHHhc--cHHHHHHHHHHHHCCCCCCCHHHHHHHH
Confidence 3444555566666543 455553322111111 111346788888999877 555544444
No 108
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=23.72 E-value=36 Score=30.96 Aligned_cols=56 Identities=16% Similarity=0.071 Sum_probs=39.7
Q ss_pred eeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-----CCCHHHHHHHHHhCCCeEe
Q 014031 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-----MSGIPEAIETARRFGMKII 131 (432)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt-----~~g~~~~~~~a~~~gi~vI 131 (432)
|++-++. +.+ ...++++.++.+++.|++.|-+.-.+. -....++.+.+++.||.+.
T Consensus 4 Mk~~~~~-~~~--~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 4 MEPCLHP-TLV--DETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp CEEEECG-GGT--TCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred chhhhcc-hhc--cCCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 4555554 333 346899999999999999998876431 1235667778888898763
No 109
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=23.43 E-value=1.1e+02 Score=27.77 Aligned_cols=40 Identities=5% Similarity=0.195 Sum_probs=29.8
Q ss_pred CCcHHHHHHHHHcCccEEEEecCC-----------CcHHHHHHHHHHcCCe
Q 014031 276 KNPAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGLL 315 (432)
Q Consensus 276 ~~~~~li~~L~~~GldGIEv~~~~-----------~~~~~~~~lA~~~gLl 315 (432)
......++.+++.|+++||++... ...+.+.++++++||-
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 62 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYT 62 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCC
Confidence 345678888899999999995321 1245678889999996
No 110
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=23.41 E-value=1.5e+02 Score=26.73 Aligned_cols=41 Identities=15% Similarity=0.313 Sum_probs=29.3
Q ss_pred cHHHHHHHHHcCccEEEEecCC-----------CcHHHHHHHHHHcCC-eeEe
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGL-LKLG 318 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~-----------~~~~~~~~lA~~~gL-l~tg 318 (432)
....++.+++.|+++||++... ...+.+.++++++|| .+++
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 68 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVI 68 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 3567778888999999997522 124567788899999 5543
No 111
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=23.37 E-value=1.1e+02 Score=27.99 Aligned_cols=57 Identities=23% Similarity=0.382 Sum_probs=42.8
Q ss_pred ceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHHHHHHHHhCCCeEeeEEEEEE
Q 014031 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPEAIETARRFGMKIIPGVEIST 138 (432)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt-~~g~~~~~~~a~~~gi~vI~GiEis~ 138 (432)
...+|.|++. .+|+++++.+.+.|.+.|.+ |-. .....+..+.+++.|+++ |+.+..
T Consensus 64 ~~~~dvhLmv------~~p~~~i~~~~~aGad~itv--H~Ea~~~~~~~i~~i~~~G~k~--gval~p 121 (228)
T 3ovp_A 64 DPFFDMHMMV------SKPEQWVKPMAVAGANQYTF--HLEATENPGALIKDIRENGMKV--GLAIKP 121 (228)
T ss_dssp SSCEEEEEEC------SCGGGGHHHHHHHTCSEEEE--EGGGCSCHHHHHHHHHHTTCEE--EEEECT
T ss_pred CCcEEEEEEe------CCHHHHHHHHHHcCCCEEEE--ccCCchhHHHHHHHHHHcCCCE--EEEEcC
Confidence 4568999986 47788999999999999999 432 234566777778888875 666653
No 112
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=23.32 E-value=42 Score=30.46 Aligned_cols=39 Identities=13% Similarity=0.047 Sum_probs=20.0
Q ss_pred HHHHHHHHHcCccEEEEecCC-------CcHHHHHHHHHHcCCeeE
Q 014031 279 AAIIRKLKDVGLHGLEVYRSD-------GKLVAYTDLADTYGLLKL 317 (432)
Q Consensus 279 ~~li~~L~~~GldGIEv~~~~-------~~~~~~~~lA~~~gLl~t 317 (432)
++.++.++++|+++||+.... ...+.+.++++++||-++
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred HHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 445555555666666665431 123445555566666443
No 113
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=23.06 E-value=2e+02 Score=26.58 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=36.6
Q ss_pred ceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC---------CCCHHHHHHHHHhCCCe
Q 014031 77 LHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT---------MSGIPEAIETARRFGMK 129 (432)
Q Consensus 77 LH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt---------~~g~~~~~~~a~~~gi~ 129 (432)
|=+|+.... ..++++.++.|++.|++.|-|...+. -....++.+.+++.||.
T Consensus 8 lG~~~~~~~-~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 68 (303)
T 3aal_A 8 IGSHVSMSG-KKMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE 68 (303)
T ss_dssp EEEECCCCT-TTTHHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC
T ss_pred eceeeecCC-CccHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc
Confidence 445555442 24899999999999999999943221 12456777888889984
No 114
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=22.94 E-value=1.4e+02 Score=26.88 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCC---CCcHHHHHHHHHcCccEEEEecCCCcHHHHHHHHHHcCCee
Q 014031 251 PLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLK 316 (432)
Q Consensus 251 ~~~eeaI~~I~~aGGi~VLAHP~~~---~~~~~li~~L~~~GldGIEv~~~~~~~~~~~~lA~~~gLl~ 316 (432)
.+++++++.++++ |.+|+-||+.. .....-++.|...+.|||=-.. ......|+++||..
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsTk-----~~~i~~Akk~GL~t 105 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIK-----PKNYVVAKKNGIPA 105 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESC-----HHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcCc-----HHHHHHHHHcCCEE
Confidence 4689999999999 89999999743 2334556666556777754333 33566788888753
No 115
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=22.91 E-value=1.2e+02 Score=28.42 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=28.2
Q ss_pred HHHHHHHcCccEEEEecCCC-----------cHHHHHHHHHHcCCeeEe
Q 014031 281 IIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLLKLG 318 (432)
Q Consensus 281 li~~L~~~GldGIEv~~~~~-----------~~~~~~~lA~~~gLl~tg 318 (432)
.++.+++.|+++||+..... ..+.+.+.++++||-+++
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 45566789999999976431 345677889999997765
No 116
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=22.58 E-value=1.5e+02 Score=28.80 Aligned_cols=55 Identities=7% Similarity=0.011 Sum_probs=36.6
Q ss_pred eeEcceeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-----CHHHHHHHHHhCC
Q 014031 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMS-----GIPEAIETARRFG 127 (432)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt~~-----g~~~~~~~a~~~g 127 (432)
=.+|.|+|...+ ...-+.....+.|...|+..+..+-+.... .+....+.+++.+
T Consensus 54 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (428)
T 3mpg_A 54 GLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKA 115 (428)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHC
T ss_pred CEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccC
Confidence 379999998654 233467788999999999999887643211 2344445555555
No 117
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=22.45 E-value=76 Score=30.47 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=43.6
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCccEEEEecCCCcHHHHHHHHHHcCCeeEeCCC
Q 014031 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLGGSD 321 (432)
Q Consensus 251 ~~~eeaI~~I~~aGGi~VLAHP~~~~~~~~li~~L~~~GldGIEv~~~~~~~~~~~~lA~~~gLl~tgGSD 321 (432)
|...++++.+++.+|++++-|... ...+++.+.+.|+|++.+-+. .+.....+ .+++.+.||=|
T Consensus 217 p~~k~i~~~i~~~~g~~~i~~~~g---~~~~l~~l~~~g~d~~~~d~~-~dl~~~~~---~~~~~l~Gn~d 280 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRG---SSSFIDLAVDYRADALSVDWS-VDIPELFK---IYDKGFQGNLE 280 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESS---HHHHHHHHTTSCCSEEECCTT-SCHHHHHH---HCCSEEECCBC
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCC---cHHHHHHHHHcCCCEEEeCCC-CCHHHHHH---hCCeEEEECCC
Confidence 456788999998766889989743 256888899999998877442 23333332 22666677766
No 118
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=22.38 E-value=65 Score=29.80 Aligned_cols=44 Identities=25% Similarity=0.435 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCC------eEeeEE
Q 014031 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGM------KIIPGV 134 (432)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi------~vI~Gi 134 (432)
|+..-.+-++.|.+.|.++|. |.+- .++..+.|+++++ .++||+
T Consensus 70 GTVlt~~~a~~ai~AGA~fiv-sP~~----~~evi~~~~~~~v~~~~~~~~~PG~ 119 (217)
T 3lab_A 70 GTVCTADDFQKAIDAGAQFIV-SPGL----TPELIEKAKQVKLDGQWQGVFLPGV 119 (217)
T ss_dssp ECCCSHHHHHHHHHHTCSEEE-ESSC----CHHHHHHHHHHHHHCSCCCEEEEEE
T ss_pred ccccCHHHHHHHHHcCCCEEE-eCCC----cHHHHHHHHHcCCCccCCCeEeCCC
Confidence 333335568999999999995 4542 3678888999999 999998
No 119
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=22.17 E-value=1.1e+02 Score=29.85 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHcCCEEEE--eCCCC
Q 014031 252 LAEVAVQLIHRTGGLAVL--AHPWA 274 (432)
Q Consensus 252 ~~eeaI~~I~~aGGi~VL--AHP~~ 274 (432)
....+++.||+.|+.+++ .|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEeeehhhccC
Confidence 346788999999998764 67654
No 120
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=22.05 E-value=1.1e+02 Score=28.31 Aligned_cols=45 Identities=20% Similarity=0.171 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhCCCeEee
Q 014031 88 LSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKIIP 132 (432)
Q Consensus 88 ~sp~elv~~A~~~Gl~~iaITDHd------t~~g~~~~~~~a~~~gi~vI~ 132 (432)
.++++.++.|++.|++.|-|.-.+ .-....++.+.+++.||.+..
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 789999999999999999987531 123466778888889888643
No 121
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=21.95 E-value=2.2e+02 Score=26.27 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=30.8
Q ss_pred cHHHHHHHHHcCccEEEEecCC-----------CcHHHHHHHHHHcCC-eeEe
Q 014031 278 PAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGL-LKLG 318 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~~-----------~~~~~~~~lA~~~gL-l~tg 318 (432)
....++.+++.|+++||++... ...+.+.++++++|| .+++
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 72 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVV 72 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 4677888899999999995321 245678889999999 4554
No 122
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=21.68 E-value=1.5e+02 Score=26.45 Aligned_cols=53 Identities=9% Similarity=0.099 Sum_probs=37.1
Q ss_pred CceeEcceeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeE
Q 014031 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (432)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (432)
-...+|+|.|- .|..+++.+.+.|.+.|.+----....+..+.+.+++.|..+
T Consensus 57 ~~v~lD~kl~d-------ip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 57 KIVLADAKIAD-------AGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDV 109 (216)
T ss_dssp SEEEEEEEECS-------CHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEecc-------cHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCc
Confidence 46789999984 388999999999999988832211111445666677777664
No 123
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=21.47 E-value=70 Score=30.21 Aligned_cols=45 Identities=20% Similarity=0.368 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEeeEE
Q 014031 89 SPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (432)
Q Consensus 89 sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~Gi 134 (432)
-++.+++.|++.|++.+.|-|- ...-..++.+.++++|+.+|+=+
T Consensus 104 G~e~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEE
T ss_pred hHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEe
Confidence 3788999999999999999994 33335678888899999886544
No 124
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=21.24 E-value=85 Score=29.49 Aligned_cols=56 Identities=13% Similarity=-0.007 Sum_probs=37.2
Q ss_pred ceeEcceeeCcCC---------------CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-CHHHHHHHHHhCC
Q 014031 72 NVVFELHSHSNFS---------------DGYLSPSKLVERAHCNGVKVLALTDHDTMS-GIPEAIETARRFG 127 (432)
Q Consensus 72 ~~~vDLH~HT~~S---------------DG~~sp~elv~~A~~~Gl~~iaITDHdt~~-g~~~~~~~a~~~g 127 (432)
+|.+|-|+|..-. ....+++++++.+.+.|++...+.-=+... ....+.+.++..+
T Consensus 3 ~m~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p 74 (303)
T 4do7_A 3 ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEA 74 (303)
T ss_dssp CCCEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCT
T ss_pred CcEEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCC
Confidence 4679999997421 135799999999999999988776543221 1233455555443
No 125
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=21.07 E-value=68 Score=29.93 Aligned_cols=42 Identities=21% Similarity=0.325 Sum_probs=31.8
Q ss_pred cHHHHHHHHHcCccEEEEecC--C----CcHHHHHHHHHHcCCeeEeCC
Q 014031 278 PAAIIRKLKDVGLHGLEVYRS--D----GKLVAYTDLADTYGLLKLGGS 320 (432)
Q Consensus 278 ~~~li~~L~~~GldGIEv~~~--~----~~~~~~~~lA~~~gLl~tgGS 320 (432)
.+. ++.+++.|+++||+... . ...+.+.++++++||-+++..
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEec
Confidence 356 88888999999999753 2 235667888999999887743
No 126
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.79 E-value=1.8e+02 Score=28.65 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=37.9
Q ss_pred CCCHHHH---HHHHHHcCCcEEEEec-C-CCC------------------CCHHHHHHHHHhCCCeEeeEEEEE
Q 014031 87 YLSPSKL---VERAHCNGVKVLALTD-H-DTM------------------SGIPEAIETARRFGMKIIPGVEIS 137 (432)
Q Consensus 87 ~~sp~el---v~~A~~~Gl~~iaITD-H-dt~------------------~g~~~~~~~a~~~gi~vI~GiEis 137 (432)
.+++++. ++.+++.|++.|.+|- | +.. +-+.+++++|++.|++|+.|+=.+
T Consensus 50 nWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S 123 (340)
T 4h41_A 50 NWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDS 123 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCC
Confidence 3788876 7788999999888864 2 111 115677899999999999997443
No 127
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=20.77 E-value=1e+02 Score=31.14 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=16.8
Q ss_pred CHHHHHHHHHHcCCEEEE--eCCCC
Q 014031 252 LAEVAVQLIHRTGGLAVL--AHPWA 274 (432)
Q Consensus 252 ~~eeaI~~I~~aGGi~VL--AHP~~ 274 (432)
....+++.||+.|+.+++ .|+++
T Consensus 105 ~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 105 GLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 456788888999888654 67664
No 128
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=20.74 E-value=99 Score=30.33 Aligned_cols=22 Identities=32% Similarity=0.271 Sum_probs=16.2
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCC
Q 014031 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (432)
Q Consensus 253 ~eeaI~~I~~aGGi~V--LAHP~~ 274 (432)
...+++.||+.|+.++ |.|+++
T Consensus 81 ~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 81 WLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceeeccccccc
Confidence 4577889999998765 467654
No 129
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=20.68 E-value=1.1e+02 Score=28.74 Aligned_cols=40 Identities=28% Similarity=0.347 Sum_probs=30.4
Q ss_pred HHHHHHHHcCccEEEEecCCC----------cHHHHHHHHHHcCCe---eEeC
Q 014031 280 AIIRKLKDVGLHGLEVYRSDG----------KLVAYTDLADTYGLL---KLGG 319 (432)
Q Consensus 280 ~li~~L~~~GldGIEv~~~~~----------~~~~~~~lA~~~gLl---~tgG 319 (432)
..++.++++|++|||+..... ..+.+.++++++||- +++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~ 87 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTN 87 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEE
Confidence 677888899999999975421 245677889999998 7763
No 130
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=20.51 E-value=1.3e+02 Score=29.78 Aligned_cols=59 Identities=8% Similarity=0.095 Sum_probs=37.0
Q ss_pred eeEcceeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCC-C-C---CHHHHHHHHHhCC-CeEe
Q 014031 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDT-M-S---GIPEAIETARRFG-MKII 131 (432)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt-~-~---g~~~~~~~a~~~g-i~vI 131 (432)
-.+|.|+|...+ +..-++....+.+.+.|+..+..+-... . . .+..+.+.++..+ +.+.
T Consensus 101 GlID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (467)
T 1xrt_A 101 GFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVL 167 (467)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEE
T ss_pred CEEEEeecccCCCCCchhhHHHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEE
Confidence 379999998653 2234577788999999998877653211 1 1 2344445555566 5554
No 131
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.21 E-value=70 Score=27.45 Aligned_cols=24 Identities=29% Similarity=0.332 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHcCCcEEEEecCCC
Q 014031 89 SPSKLVERAHCNGVKVLALTDHDT 112 (432)
Q Consensus 89 sp~elv~~A~~~Gl~~iaITDHdt 112 (432)
..-++++.|+++|...|+||+...
T Consensus 102 ~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 102 DTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCTT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCC
Confidence 344689999999999999999754
No 132
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=20.09 E-value=1.8e+02 Score=27.02 Aligned_cols=43 Identities=14% Similarity=-0.030 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHcCCcEEEEecCCCCC---------CHHHHHHHHHhCCCeEe
Q 014031 89 SPSKLVERAHCNGVKVLALTDHDTMS---------GIPEAIETARRFGMKII 131 (432)
Q Consensus 89 sp~elv~~A~~~Gl~~iaITDHdt~~---------g~~~~~~~a~~~gi~vI 131 (432)
+.+.+++.|++.|+++|=|.-.+... ...++.+.+++.||.+.
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~ 87 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIE 87 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEE
Confidence 34556788899999999997543322 24556677788888763
No 133
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.03 E-value=1.3e+02 Score=32.85 Aligned_cols=48 Identities=17% Similarity=0.324 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhCC---CeEeeE
Q 014031 86 GYLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRFG---MKIIPG 133 (432)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt~~--g~~~~~~~a~~~g---i~vI~G 133 (432)
...+|+++++.|++.+.+.|+++=.++.. ..+++.++.++.| ++++.|
T Consensus 640 ~~v~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivG 692 (762)
T 2xij_A 640 LFQTPREVAQQAVDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCG 692 (762)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 34789999999999999999999876643 3455666666655 477776
Done!