BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014032
(432 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZK33|LETM1_CHICK LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Gallus gallus GN=LETM1 PE=2 SV=1
Length = 752
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 5/211 (2%)
Query: 11 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 69
G++ K D F K+R TG SN+EIL F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 277 GNVTK---DFSTFFQKIRETGERPSNEEILRFSKLFEDELTLDNLTRPQLVALCKLLELQ 333
Query: 70 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 128
GT+ +LR+ L RL+ IK DDKMI EGV+SL+ EL+ ACR RG+ L EE +R+
Sbjct: 334 SIGTNNFLRFQLTMRLRTIKADDKMIAEEGVDSLTVKELQAACRARGMRALGVTEERLRE 393
Query: 129 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 188
QL+ WLDL LN +P+SLLILSRA + + P + ++ TL +LP+ V V E
Sbjct: 394 QLKQWLDLHLNQEIPTSLLILSRAMYLPDTLSPADQLKTTLQTLPESVAKEAQVKVAEVE 453
Query: 189 DSISERRRKLEFLEMQEELIKEEEEEEEEEQ 219
+ + +LE +E I++E EE+E E+
Sbjct: 454 GEKVDNKARLEATLQEEAAIRKENEEKEMER 484
>sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Rattus norvegicus GN=Letm1 PE=1 SV=1
Length = 739
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 149/254 (58%), Gaps = 14/254 (5%)
Query: 1 MAKEVQNSRGGDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRL 59
MA + + ++G K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+L
Sbjct: 270 MALKNKAAKGNATK----DFSAFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQL 325
Query: 60 VNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLG 119
V +CK + + GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+
Sbjct: 326 VALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLISEEGVDSLTVKELQAACRARGMRA 385
Query: 120 LLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVD 178
L E+ ++ QL+ WLDL L H +P+SLLILSRA + + P + +++TL +LP+ V
Sbjct: 386 LGVTEDRLKGQLKQWLDLHLYHEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEIVAK 445
Query: 179 TVGVTALPSEDSISERRRKLEFLEMQEELIKEEEEEEEEEQAKMKEAVRSRKDVALE--E 236
V A E + + KLE +E I++E EE +K A + KD+ E E
Sbjct: 446 EAQVKAAEVEGEQVDNKAKLEATLQEEAAIQQEHLEE------LKRAAETAKDIQPEVAE 499
Query: 237 MTDPTAKEAQEQAK 250
T P A+ Q K
Sbjct: 500 ATVPGRPGAELQPK 513
>sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Mus
musculus GN=Letm1 PE=2 SV=1
Length = 738
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 142/237 (59%), Gaps = 12/237 (5%)
Query: 1 MAKEVQNSRGGDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRL 59
MA + + ++G K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+L
Sbjct: 270 MALKNKAAKGNATK----DFSAFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQL 325
Query: 60 VNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLG 119
V +CK + + GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+
Sbjct: 326 VALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLISEEGVDSLTVKELQAACRARGMRA 385
Query: 120 LLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVD 178
L E+ ++ QL+ WLDL L+H +P+SLLILSRA + + P + +++TL +LP+ V
Sbjct: 386 LGVTEDRLKGQLKQWLDLHLHHEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEIVAK 445
Query: 179 TVGVTALPSEDSISERRRKLEFLEMQEELIKEEEEEEEEEQAKMKEAVRSRKDVALE 235
V E + + KLE +E I++E EE +K A + KD+ E
Sbjct: 446 EAQVKVAEVEGEKVDNKAKLEATLQEEAAIQQEHLEE------LKRASEAVKDIQPE 496
>sp|Q0VCA3|LETM1_BOVIN LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Bos
taurus GN=LETM1 PE=2 SV=1
Length = 732
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 140/228 (61%), Gaps = 7/228 (3%)
Query: 1 MAKEVQNSRGGDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRL 59
MA + + ++G K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+L
Sbjct: 257 MALKNKAAKGSATK----DFSVFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQL 312
Query: 60 VNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLG 119
V +CK + + GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+
Sbjct: 313 VALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRA 372
Query: 120 LLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVD 178
L E+ +R QL+ WL+L L+ +P+SLLILSRA + + P + +++TL +LP+ V
Sbjct: 373 LGVTEDRLRGQLKQWLELHLHQEIPTSLLILSRAMYLPETLSPADQLKSTLQTLPEIVAK 432
Query: 179 TVGVTALPSEDSISERRRKLEFLEMQEELIKEEEEEEEEEQAKMKEAV 226
V E + + KLE +QEE ++E E+E Q K + AV
Sbjct: 433 EAQVKVAEVEGEQVDNKAKLE-ATLQEEAAIQQEHREKELQRKSQAAV 479
>sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Homo sapiens GN=LETM1 PE=1 SV=1
Length = 739
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 127/202 (62%), Gaps = 2/202 (0%)
Query: 17 AEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDA 75
+D F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + + GT+
Sbjct: 283 TKDFSVFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQSIGTNN 342
Query: 76 YLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQQLRDWL 134
+LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+ L E+ +R QL+ WL
Sbjct: 343 FLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRGQLKQWL 402
Query: 135 DLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSEDSISER 194
DL L+ +P+SLLILSRA + + P + +++TL +LP+ V V E +
Sbjct: 403 DLHLHQEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEIVAKEAQVKVAEVEGEQVDN 462
Query: 195 RRKLEFLEMQEELIKEEEEEEE 216
+ KLE +E I++E E+E
Sbjct: 463 KAKLEATLQEEAAIQQEHREKE 484
>sp|Q1LY46|LETM1_DANRE LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Danio rerio GN=letm1 PE=3 SV=2
Length = 757
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Query: 16 TAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTD 74
E+ F K+R +G SN++I+ F+KLF DELTLDN++RP+LV +CK + + GT+
Sbjct: 289 VTEEFSTFFQKIRDSGEIPSNEQIIRFSKLFEDELTLDNLTRPQLVALCKLLELQSIGTN 348
Query: 75 AYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQQLRDW 133
+LR+ L +L+ I+ DDK+I EGV+SL+ EL+ ACR RG+ L EE +R+QL+ W
Sbjct: 349 NFLRFQLIMKLRAIRADDKLIAEEGVDSLTANELQAACRVRGMRALGVTEERLREQLKQW 408
Query: 134 LDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSEDSISE 193
L+L LN +P+SLL+LSRA + + P + ++ TL +LP+ + V + S +
Sbjct: 409 LELHLNQHIPTSLLLLSRAMFLPDTLSPADQLKTTLQNLPEIMAKEAQVKVAELDFSKVD 468
Query: 194 RRRKLEFLEMQEELIKEEEEEEEEEQ 219
+ KLE +E I++E E E E+
Sbjct: 469 NKTKLETTLQEEAAIRQENRERELER 494
>sp|Q0VA06|LETM1_XENTR LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Xenopus tropicalis GN=letm1 PE=2 SV=1
Length = 760
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 239/444 (53%), Gaps = 51/444 (11%)
Query: 11 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 69
GD+ TAE F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 282 GDV--TAE-FATFFQKIRSTGERPSNEEIVRFSKLFEDELTLDNLTRPQLVALCKLLELQ 338
Query: 70 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 128
GT+ +LR+ L +L+ IK DDK+I EG++SL+ EL+ ACR RG+ L E+ +++
Sbjct: 339 SIGTNNFLRFQLTMKLRSIKADDKLIADEGLDSLTVTELQAACRARGMRALGVTEDRLKE 398
Query: 129 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 188
QL+ WL+L L+ +P+SLL+LSRA + + P + ++ TL +LP+ V V E
Sbjct: 399 QLKQWLELHLDQEIPTSLLLLSRALYLPDTLSPADQLKTTLQTLPESVAKEAQVKVAAVE 458
Query: 189 DSISERRRKLEFLEMQEELIKEEEEEEEEEQ----AKMKEAVRSRKDV--ALE-----EM 237
+ + KLE +EE I++E +E+E E+ AK + V ++ DV A E EM
Sbjct: 459 CEKVDNKTKLEATLQEEEAIRKENQEKEMERLADAAKESQQVAAKVDVQSAPEEAISGEM 518
Query: 238 TDPTAKEAQEQAKAK--TLEKHEQLCELSRALA-------------VLASASSVSHEREE 282
TA A E A A+ E+ E L + + L +L+ A + E+++
Sbjct: 519 KTATADTAAEPAVAQMSASEQAEILKDTAPVLEGIKGEEITKEEIDILSDACTKLKEQKK 578
Query: 283 FLRLVNKEIELYNSMVEKDGKVGEEEAKKAYRAAREETDQDAGEDVDEKVSSALINRVDA 342
L +E+ V++ + +E K+ + +E+ Q+ K S L RV+
Sbjct: 579 LLTKEKEELSELKDDVQEYSEDLQEIKKELSKTGQEKVLQET------KASKILTKRVNR 632
Query: 343 MLQKLEKEIDDVDAKIGDRWRLLDRDY---------DGKVTAEEVASAAMYLKDTLDKEG 393
M+ +++K I +++ + ++LD + V+ E+ S +++ + ++
Sbjct: 633 MIGQMDKIISELE----NEEKVLDEHIEKGSVPPVGENLVSINELISIMRHIQK-IPEQK 687
Query: 394 IQELIANLSKDREGKILVEDIVKL 417
+Q + A L ++++GKI ++D+ K+
Sbjct: 688 LQRIAAALDENKDGKIDLDDVAKV 711
>sp|O13920|MDM28_SCHPO LETM1 domain-containing protein mdm28, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mdm28 PE=2 SV=3
Length = 485
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 17 AEDLDEFMNKVRT-GAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDA 75
+++ +F KVRT G S +E++ K F D++TLDN+SR +LV MC+YM ++ FGTD
Sbjct: 247 SKEFRDFFQKVRTSGQSPSREELIEVCKYFKDDITLDNLSRAQLVAMCRYMNLNAFGTDP 306
Query: 76 YLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWL 134
LRY +R R+++I+ DD+ I EG+ SLS EL AC RG+ LS +++++L WL
Sbjct: 307 LLRYNIRHRMRQIRRDDRAIYIEGINSLSIPELFNACNSRGIRTQGLSPAKLKEELSVWL 366
Query: 135 DLSLNHSVPSSLLILSRAFSVS---GKVRPE-EAVQATLSSLPDEV 176
D+ + H +PS +L+LS AFS G +A+Q TL+S+PDE+
Sbjct: 367 DMRIKHGIPSVILMLSNAFSYGYNEGTYDSRWDALQDTLASIPDEL 412
>sp|P91927|A60DA_DROME LETM1 and EF-hand domain-containing protein anon-60Da,
mitochondrial OS=Drosophila melanogaster GN=Letm1 PE=2
SV=2
Length = 1013
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 17 AEDLDEFMNKVRTGA-GVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDA 75
A+ + F K+R VSNDEI+ FAK F+DE+TLD++SR +L +C+ + ++ GT
Sbjct: 311 AKQFEAFFTKIRNPTEPVSNDEIIKFAKRFDDEITLDSLSREQLAALCRVLELNTIGTTT 370
Query: 76 YLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWL 134
LR+ LR +L+ + DD++I EGV+SL EL+QAC+ RG+ L+ E +R QL++W+
Sbjct: 371 LLRFQLRLKLRSLATDDRVIAREGVDSLDLLELQQACKARGMRAYGLTEERLRFQLKEWI 430
Query: 135 DLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEV 176
DLSLN VP +LL+LSR +S + ++ T+ LPD V
Sbjct: 431 DLSLNEQVPPTLLLLSRTMLISDDSITTDKLKETIRVLPDAV 472
>sp|Q2VYF4|LETM2_HUMAN LETM1 domain-containing protein LETM2, mitochondrial OS=Homo
sapiens GN=LETM2 PE=2 SV=2
Length = 491
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Query: 17 AEDLDEFMNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAY 76
+ L ++ +V+TG S EI+ F+KLF D+L L+++ RP+LV +CK + + FGT+
Sbjct: 252 STQLSSYVKQVQTGHKPSTKEIVRFSKLFEDQLALEHLDRPQLVALCKLLELQTFGTNNL 311
Query: 77 LRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWLD 135
LR+ L +L+ IK DD++I EGV +LS +EL+ ACR RG+ L L+ E++RQQL +W D
Sbjct: 312 LRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQD 371
Query: 136 LSLNHSVPSSLLILSRAF 153
L L +VP SLL+LSR F
Sbjct: 372 LHLKENVPPSLLLLSRTF 389
>sp|Q5PQQ5|LETM2_RAT LETM1 domain-containing protein LETM2, mitochondrial OS=Rattus
norvegicus GN=Letm2 PE=2 SV=1
Length = 459
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Query: 23 FMNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLR 82
++ +V+TG S EI+ F+KLF D+L L+++ RP+LV +CK + + FGT+ LR+ L
Sbjct: 260 YVKQVQTGHKPSTKEIVRFSKLFEDQLALEHLRRPQLVALCKLLELQAFGTNNLLRFQLL 319
Query: 83 RRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWLDLSLNHS 141
L+ IK DD++I EGV++LS +EL+ ACR RG+ L L+ E++RQQL +WLDL L +
Sbjct: 320 MTLRSIKADDEVIAKEGVKALSVSELQAACRARGMRSLGLTEEQLRQQLTEWLDLHLKEN 379
Query: 142 VPSSLLILSRAFSV 155
VP SLL+LSR F +
Sbjct: 380 VPPSLLLLSRTFYL 393
>sp|Q7TNU7|LETM2_MOUSE LETM1 domain-containing protein LETM2, mitochondrial OS=Mus
musculus GN=Letm2 PE=2 SV=1
Length = 480
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 17 AEDLDEFMNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAY 76
+ L ++ +V+TG S EI+ F+KLF D+L L+++ RP+LV +CK + + FGT+
Sbjct: 250 SSQLSSYVKQVQTGHKPSTKEIVRFSKLFKDQLALEHLDRPQLVALCKLLELQTFGTNNL 309
Query: 77 LRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWLD 135
LR+ L L+ IK DD++I EGV++LS +EL+ ACR RG+ L L+ E++ QQL WLD
Sbjct: 310 LRFQLLMTLKSIKADDEIIAKEGVKALSVSELQSACRARGMRSLGLTEEQLCQQLTGWLD 369
Query: 136 LSLNHSVPSSLLILSRAFS-VSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSEDS 190
L L +VP SLL+LSR F + K +P E + P+ +G+ P +S
Sbjct: 370 LHLKENVPPSLLLLSRTFYLIDVKPKPIELPPNIETPKPN-----LGIPTPPPPES 420
>sp|Q08179|MDM38_YEAST Mitochondrial distribution and morphology protein 38
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MDM38 PE=1 SV=1
Length = 573
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 121/225 (53%), Gaps = 38/225 (16%)
Query: 35 NDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKM 94
+DEI A A++F ++ LDN+SRP+L M K+M + PFG D LRY +R +L++I NDDK
Sbjct: 238 HDEISAIAQMFKNDSVLDNLSRPQLAAMSKFMSLRPFGNDNMLRYQIRSKLKDIMNDDKT 297
Query: 95 IQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 153
I EGVESLS+ EL QAC RG+ +S E++ L+ WL+L L +PS L++LS F
Sbjct: 298 IDYEGVESLSQEELYQACVSRGMKAYGVSKEDLVDNLKVWLELRLRQKIPSVLMVLSSTF 357
Query: 154 SVSGKVRPEE----------------------------AVQATLSSLPDEVVDTVGVTAL 185
+ G P+E + LSS+PD V + +
Sbjct: 358 TFGG--LPKENYSKAFSPLAEKKETKSKYDDLLDLYYDGILQVLSSIPDPVYNVAKLDVS 415
Query: 186 PSEDSISERRRKLEFLEMQEELIKEEEEEEE----EEQAKMKEAV 226
S+ S +E + ++ E+ IK EE+ EE +E+A KE+V
Sbjct: 416 ESKSSAAETEAE---KQVAEKKIKTEEKPEETAIPKEEATAKESV 457
>sp|Q06493|YLH47_YEAST LETM1 domain-containing protein YLH47, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YLH47 PE=1 SV=1
Length = 454
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Query: 20 LDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLR 78
+ F VR TG S +++ A+LF D+ LDN++RP L+ + KYM + PFGTD LR
Sbjct: 212 FNRFYTHVRATGVPESRQQLIEVARLFTDDTVLDNVTRPYLIALAKYMNLQPFGTDVMLR 271
Query: 79 YMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWLDLS 137
Y +R ++ E+K DD I E E LS +EL+ AC RG+ + + + LR WL++
Sbjct: 272 YRIRYKMLELKKDDLSIYYEDAEQLSLSELKTACASRGIRSVDVEPSVLYSNLRLWLNMR 331
Query: 138 LNHSVPSSLLILSRAFSVSGKVRPEEAVQATLS----SLPDEVVDTVGVTALPSEDSISE 193
L +PS+LLI++ A++ G V+ +E++ L +PDE+ V V + ED S
Sbjct: 332 LKDKIPSTLLIMATAYNY-GNVQSKESLYDALCDVLIGIPDELYHEVKVNVV-KEDEASA 389
Query: 194 RRR 196
+++
Sbjct: 390 KQK 392
>sp|Q28DA8|LETM2_XENTR LETM1 domain-containing protein LETM2, mitochondrial OS=Xenopus
tropicalis GN=letm2 PE=2 SV=1
Length = 444
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 95/147 (64%), Gaps = 5/147 (3%)
Query: 1 MAKEVQNSRGGDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRL 59
MA+ + G D T + ++ +VR TG S EI+ F+KLF DELTL+++ R +L
Sbjct: 218 MARRNKAETGAD---TQQQFSSYVQQVRGTGEQPSTKEIVRFSKLFEDELTLEHLERSQL 274
Query: 60 VNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLG 119
V +C+ + + P GT+ LR+ L +L+ I+ DD+MI EGVE+L+ AEL+ A R RG+
Sbjct: 275 VALCRLLELPPIGTNNLLRFQLMMQLRSIRADDEMISKEGVENLTVAELQAASRARGMRS 334
Query: 120 L-LSVEEMRQQLRDWLDLSLNHSVPSS 145
L L+ E++++Q++ WLDL L +VP S
Sbjct: 335 LGLTEEQLKEQMKQWLDLHLKENVPPS 361
>sp|A3KN46|LTMD1_BOVIN LETM1 domain-containing protein 1 OS=Bos taurus GN=LETMD1 PE=2 SV=1
Length = 360
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 19 DLDEFMNKVRTGAGVSNDEILAFAKLF-NDELTLDNISRPRLVNMCKYMGISPFGTDAYL 77
+ E K++ G + +ILA + F N L +D + ++ +C+ M ++P+ L
Sbjct: 213 HMTELCTKMQRGTHPAVHDILALRECFANHPLGMDQLRALQMKALCRAMLLTPYLPSVLL 272
Query: 78 RYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQQLRDWLDL 136
R+ L+ I DK + GV L+ E++ AC RGL EE R L +WL +
Sbjct: 273 RHRLKTHTTVIHQLDKALAKLGVGQLTAQEVKSACYLRGLNSTHIAEERCRTWLGEWLQI 332
Query: 137 S 137
S
Sbjct: 333 S 333
>sp|P41210|CATR_ATRNU Caltractin OS=Atriplex nummularia PE=2 SV=1
Length = 167
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 356 AKIGDR---------WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDRE 406
AKIG+R +R++D+D +GK++ E++ A L + + IQ++I +DR+
Sbjct: 89 AKIGERDTKEELMKAFRIIDQDNNGKISPEDIQRIAKELGENFTVKDIQDMIEEADRDRD 148
Query: 407 GKILVEDIVKLASQT 421
G++ VE+ +++ +T
Sbjct: 149 GEVNVEEFLRMMKRT 163
>sp|P04630|CALL_CAEEL Calmodulin-like protein OS=Caenorhabditis elegans GN=cal-1 PE=3
SV=1
Length = 161
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 297 MVEKDGKVGEEEAKKAYRAAREETDQDAGEDVDEKVSSALINRVD-------------AM 343
M +KDG G K+ A R G++ E+ +IN VD M
Sbjct: 32 MFDKDGN-GTISTKELGIAMRS-----LGQNPTEQEILEMINEVDIDGNGQIEFPEFCVM 85
Query: 344 LQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSK 403
++++ KE D I + +R+ D+D +G +TA+E +++ +E + E+I +
Sbjct: 86 MKRMMKETDS--EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDV 143
Query: 404 DREGKILVEDIVKLAS 419
D +G+I E+ VK+ S
Sbjct: 144 DGDGEIDYEEFVKMMS 159
>sp|P43645|CATR_SPESI Caltractin (Fragment) OS=Spermatozopsis similis PE=2 SV=1
Length = 148
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 356 AKIGDR---------WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDRE 406
AK+G+R +RL D D GK+T + + A L + L E IQE+I +D +
Sbjct: 71 AKMGERDSREEIMKAFRLFDDDQTGKITFKNLKRVAKELGENLTDEEIQEMIDEADRDGD 130
Query: 407 GKILVEDIVKLASQT 421
G+I E+ ++ +T
Sbjct: 131 GEINEEEFFRIMKKT 145
>sp|O23184|CML19_ARATH Calcium-binding protein CML19 OS=Arabidopsis thaliana GN=CML19 PE=2
SV=1
Length = 167
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 36/60 (60%)
Query: 362 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLASQT 421
++++D D +GK++ ++ A L + I+E+I +D++G++ +E+ +K+ +T
Sbjct: 105 FKIIDHDNNGKISPRDIKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRT 164
>sp|P41209|CETN1_MOUSE Centrin-1 OS=Mus musculus GN=Cetn1 PE=1 SV=1
Length = 172
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 342 AMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANL 401
M QK+ ++ D +I +RL D D GK++ + + A L ++L E +QE+I
Sbjct: 92 VMTQKMAEK--DTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEA 149
Query: 402 SKDREGKILVEDIVKLASQT 421
+D +G++ E+ +K+ +T
Sbjct: 150 DRDGDGEVNEEEFLKIMKKT 169
>sp|A5N245|MUTS2_CLOK5 MutS2 protein OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
NCIMB 10680) GN=mutS2 PE=3 SV=1
Length = 786
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Query: 150 SRAFSVSGKVR-PEEAVQATLSSLPDEVVDTVGVTALPSED---SISERRRKLEFLEMQE 205
S AF +S ++ PE ++A ++ E AL ED S+ E+R K E +
Sbjct: 486 SNAFEISKRLGLPEFIIKAARENIASE--------ALKFEDLIQSLQEKRIKAENYFREA 537
Query: 206 ELIKEEEEEEEEEQAKMKEAVRSRKDVALEEMTDPTAKEAQEQAKAKTLEKHEQ---LCE 262
E++K E AK+KE +K + L+E+ D + EA +A+ E E+ + +
Sbjct: 538 EILKRE-------AAKIKEKYE-QKAIRLQEVRDKSITEAHRKAREIIRESKEEADRILK 589
Query: 263 LSRALAVLASASSVSHEREEFLRLVNKEIE 292
R L + +SSV HE EE +++ ++E
Sbjct: 590 DIRELEKMGYSSSVKHELEERRKMLKDKLE 619
>sp|B9E5U7|MUTS2_CLOK1 MutS2 protein OS=Clostridium kluyveri (strain NBRC 12016) GN=mutS2
PE=3 SV=1
Length = 786
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Query: 150 SRAFSVSGKVR-PEEAVQATLSSLPDEVVDTVGVTALPSED---SISERRRKLEFLEMQE 205
S AF +S ++ PE ++A ++ E AL ED S+ E+R K E +
Sbjct: 486 SNAFEISKRLGLPEFIIKAARENIASE--------ALKFEDLIQSLQEKRIKAENYFREA 537
Query: 206 ELIKEEEEEEEEEQAKMKEAVRSRKDVALEEMTDPTAKEAQEQAKAKTLEKHEQ---LCE 262
E++K E AK+KE +K + L+E+ D + EA +A+ E E+ + +
Sbjct: 538 EILKRE-------AAKIKEKYE-QKAIRLQEVRDKSITEAHRKAREIIRESKEEADRILK 589
Query: 263 LSRALAVLASASSVSHEREEFLRLVNKEIE 292
R L + +SSV HE EE +++ ++E
Sbjct: 590 DIRELEKMGYSSSVKHELEERRKMLKDKLE 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,383,827
Number of Sequences: 539616
Number of extensions: 6472059
Number of successful extensions: 75018
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 2646
Number of HSP's that attempted gapping in prelim test: 55017
Number of HSP's gapped (non-prelim): 11698
length of query: 432
length of database: 191,569,459
effective HSP length: 120
effective length of query: 312
effective length of database: 126,815,539
effective search space: 39566448168
effective search space used: 39566448168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)