Query 014037
Match_columns 432
No_of_seqs 262 out of 1993
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 01:14:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014037.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014037hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 1.6E-39 3.4E-44 322.8 37.0 293 123-416 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 6.6E-39 1.4E-43 313.1 33.6 292 126-417 2-296 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 4.2E-40 9.2E-45 315.7 14.8 292 124-421 15-314 (316)
4 KOG1444 Nucleotide-sugar trans 100.0 9.1E-27 2E-31 218.9 26.1 291 129-423 15-309 (314)
5 KOG1443 Predicted integral mem 100.0 1.3E-27 2.8E-32 221.4 19.0 289 124-414 14-315 (349)
6 PLN00411 nodulin MtN21 family 100.0 9.5E-26 2.1E-30 223.7 32.9 287 129-422 16-336 (358)
7 PF08449 UAA: UAA transporter 100.0 2E-25 4.4E-30 217.9 31.4 278 136-419 10-302 (303)
8 PRK11689 aromatic amino acid e 99.9 2.5E-24 5.5E-29 209.5 32.4 269 124-416 6-289 (295)
9 PRK11272 putative DMT superfam 99.9 4.9E-23 1.1E-27 200.2 34.9 264 139-417 21-288 (292)
10 PRK10532 threonine and homoser 99.9 7.3E-23 1.6E-27 199.1 31.6 255 139-416 25-283 (293)
11 TIGR00950 2A78 Carboxylate/Ami 99.9 1.1E-22 2.3E-27 194.2 29.8 252 140-409 3-259 (260)
12 KOG1442 GDP-fucose transporter 99.9 8E-26 1.7E-30 206.1 7.6 293 129-427 31-340 (347)
13 PF06027 DUF914: Eukaryotic pr 99.9 3.5E-23 7.7E-28 201.5 26.4 274 139-420 26-311 (334)
14 PRK11453 O-acetylserine/cystei 99.9 1.8E-22 3.9E-27 196.9 31.2 275 125-417 7-290 (299)
15 PRK15430 putative chlorampheni 99.9 2.7E-22 5.9E-27 195.3 31.0 261 139-416 21-287 (296)
16 TIGR03340 phn_DUF6 phosphonate 99.9 8.7E-20 1.9E-24 176.4 26.9 260 139-411 14-280 (281)
17 COG0697 RhaT Permeases of the 99.8 2.9E-17 6.4E-22 158.3 33.7 263 139-415 20-288 (292)
18 COG5070 VRG4 Nucleotide-sugar 99.8 2E-19 4.4E-24 159.7 16.9 280 131-420 11-302 (309)
19 KOG1581 UDP-galactose transpor 99.8 2.1E-18 4.5E-23 160.6 24.3 286 125-418 13-317 (327)
20 KOG1582 UDP-galactose transpor 99.8 2.1E-18 4.6E-23 157.5 18.7 288 120-416 37-334 (367)
21 TIGR00688 rarD rarD protein. T 99.8 6.3E-17 1.4E-21 154.3 29.2 243 126-389 6-255 (256)
22 KOG1580 UDP-galactose transpor 99.8 7.5E-19 1.6E-23 157.4 14.4 254 152-414 50-313 (337)
23 COG5006 rhtA Threonine/homoser 99.8 6.6E-17 1.4E-21 146.8 26.2 249 143-413 29-281 (292)
24 KOG4510 Permease of the drug/m 99.8 1.8E-19 3.9E-24 164.2 3.4 272 129-417 42-328 (346)
25 KOG1583 UDP-N-acetylglucosamin 99.8 3.1E-18 6.7E-23 157.0 10.1 269 142-420 19-320 (330)
26 PF03151 TPT: Triose-phosphate 99.7 1.1E-16 2.4E-21 140.2 15.7 145 270-414 1-153 (153)
27 TIGR00776 RhaT RhaT L-rhamnose 99.7 7E-15 1.5E-19 142.7 28.0 261 128-415 7-289 (290)
28 PF04142 Nuc_sug_transp: Nucle 99.7 2.5E-15 5.5E-20 141.5 20.9 211 187-405 15-244 (244)
29 KOG3912 Predicted integral mem 99.7 9.7E-15 2.1E-19 134.3 20.9 274 139-415 16-335 (372)
30 KOG2234 Predicted UDP-galactos 99.6 2.3E-13 5E-18 130.5 27.2 276 136-419 25-327 (345)
31 COG2962 RarD Predicted permeas 99.6 7.1E-13 1.5E-17 123.8 29.5 277 124-421 9-290 (293)
32 KOG2765 Predicted membrane pro 99.6 4.4E-15 9.5E-20 142.0 13.5 226 187-418 157-394 (416)
33 KOG2766 Predicted membrane pro 99.2 1.6E-12 3.5E-17 118.3 0.7 262 139-416 31-301 (336)
34 PF00892 EamA: EamA-like trans 99.2 1.8E-10 3.9E-15 96.6 11.2 120 139-260 4-125 (126)
35 KOG4314 Predicted carbohydrate 99.2 1.8E-10 4E-15 101.2 10.2 218 188-414 52-276 (290)
36 TIGR00803 nst UDP-galactose tr 99.1 2E-10 4.4E-15 107.1 10.4 188 213-412 2-222 (222)
37 PF06800 Sugar_transport: Suga 99.1 4.8E-08 1E-12 92.2 22.1 210 186-411 42-268 (269)
38 COG2510 Predicted membrane pro 99.0 4.8E-09 1E-13 86.2 10.8 122 139-261 16-139 (140)
39 COG2510 Predicted membrane pro 99.0 3E-09 6.5E-14 87.4 8.7 135 270-413 4-138 (140)
40 PF00892 EamA: EamA-like trans 98.9 5.1E-09 1.1E-13 87.7 9.7 124 279-413 1-125 (126)
41 PF13536 EmrE: Multidrug resis 98.9 6.7E-09 1.4E-13 86.3 9.3 105 160-265 2-110 (113)
42 PRK15430 putative chlorampheni 98.7 7E-07 1.5E-11 87.0 17.8 139 267-413 6-144 (296)
43 TIGR00688 rarD rarD protein. T 98.7 6.2E-07 1.3E-11 85.4 17.0 139 270-413 3-141 (256)
44 TIGR03340 phn_DUF6 phosphonate 98.6 6.7E-07 1.5E-11 86.4 14.8 133 271-414 3-135 (281)
45 TIGR00950 2A78 Carboxylate/Ami 98.6 2.8E-06 6.1E-11 80.8 17.3 118 139-257 141-260 (260)
46 PF05653 Mg_trans_NIPA: Magnes 98.4 1.9E-06 4.1E-11 83.9 11.4 64 197-260 58-121 (300)
47 PLN00411 nodulin MtN21 family 98.4 7.8E-06 1.7E-10 81.6 15.7 135 270-414 14-156 (358)
48 PRK10532 threonine and homoser 98.4 2.1E-05 4.6E-10 76.5 17.4 120 139-261 161-281 (293)
49 PRK11689 aromatic amino acid e 98.3 1.9E-05 4.1E-10 76.9 15.6 119 139-261 169-287 (295)
50 PRK02971 4-amino-4-deoxy-L-ara 98.3 1.7E-05 3.6E-10 67.2 13.1 120 269-415 2-123 (129)
51 PRK15051 4-amino-4-deoxy-L-ara 98.3 3.4E-05 7.4E-10 63.7 13.5 65 197-261 45-109 (111)
52 PRK11272 putative DMT superfam 98.3 3.7E-05 8E-10 74.8 16.1 123 139-263 163-287 (292)
53 COG2962 RarD Predicted permeas 98.1 0.00012 2.7E-09 69.1 15.7 141 267-416 5-146 (293)
54 PRK13499 rhamnose-proton sympo 98.1 0.0014 3E-08 64.7 22.4 225 185-415 69-342 (345)
55 PTZ00343 triose or hexose phos 98.0 0.00016 3.6E-09 72.1 16.1 136 267-413 47-185 (350)
56 PRK11453 O-acetylserine/cystei 98.0 0.00028 6.2E-09 68.8 17.1 124 139-262 156-288 (299)
57 PF03151 TPT: Triose-phosphate 98.0 0.00046 1E-08 60.0 15.4 127 134-260 8-152 (153)
58 TIGR00817 tpt Tpt phosphate/ph 97.9 0.00038 8.3E-09 67.9 15.1 124 279-413 12-136 (302)
59 PF13536 EmrE: Multidrug resis 97.8 0.00072 1.6E-08 55.9 13.1 62 354-416 47-108 (113)
60 COG4975 GlcU Putative glucose 97.7 7.3E-06 1.6E-10 75.1 -0.3 219 181-416 51-287 (288)
61 TIGR00776 RhaT RhaT L-rhamnose 97.7 0.0004 8.6E-09 67.5 11.8 132 270-416 2-138 (290)
62 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.0021 4.6E-08 54.5 14.7 72 192-263 51-124 (129)
63 COG0697 RhaT Permeases of the 97.7 0.0026 5.7E-08 60.9 17.4 119 140-262 168-288 (292)
64 PRK15051 4-amino-4-deoxy-L-ara 97.6 0.0025 5.5E-08 52.5 13.6 53 361-413 56-108 (111)
65 KOG2922 Uncharacterized conser 97.5 0.00028 6E-09 67.5 7.9 66 196-261 71-136 (335)
66 PRK10452 multidrug efflux syst 97.5 0.0018 3.9E-08 54.0 10.8 70 193-262 34-104 (120)
67 PRK09541 emrE multidrug efflux 97.3 0.0034 7.4E-08 51.6 10.8 69 195-263 36-105 (110)
68 PRK10650 multidrug efflux syst 97.3 0.0053 1.1E-07 50.3 11.4 68 193-260 39-107 (109)
69 COG5006 rhtA Threonine/homoser 97.3 0.0058 1.3E-07 56.7 12.8 117 139-257 161-278 (292)
70 PRK11431 multidrug efflux syst 97.3 0.0044 9.5E-08 50.5 10.7 68 194-261 34-102 (105)
71 PRK10452 multidrug efflux syst 97.2 0.002 4.2E-08 53.8 8.2 56 361-416 49-105 (120)
72 PF06027 DUF914: Eukaryotic pr 97.2 0.0096 2.1E-07 58.7 14.0 70 347-416 84-153 (334)
73 PF08449 UAA: UAA transporter 97.1 0.014 3E-07 57.0 15.0 133 129-261 157-297 (303)
74 COG2076 EmrE Membrane transpor 97.1 0.0031 6.7E-08 51.0 8.2 69 194-262 35-104 (106)
75 PF04657 DUF606: Protein of un 97.0 0.028 6E-07 48.3 13.7 119 139-258 14-138 (138)
76 COG2076 EmrE Membrane transpor 97.0 0.012 2.6E-07 47.6 10.5 55 361-415 49-104 (106)
77 PRK09541 emrE multidrug efflux 96.9 0.007 1.5E-07 49.8 8.9 56 361-416 49-105 (110)
78 PRK13499 rhamnose-proton sympo 96.9 0.028 6.1E-07 55.6 14.6 141 268-418 6-157 (345)
79 PRK10650 multidrug efflux syst 96.9 0.03 6.5E-07 45.9 12.4 53 361-413 54-107 (109)
80 PF04142 Nuc_sug_transp: Nucle 96.8 0.0049 1.1E-07 58.3 7.8 76 344-419 19-94 (244)
81 PF04657 DUF606: Protein of un 96.7 0.049 1.1E-06 46.7 12.9 130 271-411 3-138 (138)
82 PRK11431 multidrug efflux syst 96.6 0.022 4.8E-07 46.4 9.3 54 361-414 48-102 (105)
83 PF00893 Multi_Drug_Res: Small 96.4 0.025 5.5E-07 45.0 8.6 58 195-252 35-93 (93)
84 PF06800 Sugar_transport: Suga 96.3 0.12 2.7E-06 49.1 13.8 73 184-257 191-267 (269)
85 PF10639 UPF0546: Uncharacteri 95.8 0.026 5.6E-07 46.4 5.9 69 190-259 43-112 (113)
86 TIGR00803 nst UDP-galactose tr 95.7 0.1 2.2E-06 48.4 10.5 66 193-258 156-221 (222)
87 COG3238 Uncharacterized protei 95.5 0.48 1E-05 41.0 13.1 120 139-260 18-145 (150)
88 COG3238 Uncharacterized protei 95.5 0.42 9E-06 41.4 12.5 137 268-414 4-146 (150)
89 PF05653 Mg_trans_NIPA: Magnes 95.5 0.09 2E-06 51.3 9.6 117 267-413 5-121 (300)
90 PF07857 DUF1632: CEO family ( 95.3 0.025 5.5E-07 53.4 5.0 132 270-419 1-139 (254)
91 KOG1581 UDP-galactose transpor 95.1 0.56 1.2E-05 45.0 13.3 132 128-259 174-311 (327)
92 KOG2234 Predicted UDP-galactos 94.9 1.5 3.3E-05 43.0 15.8 116 295-413 45-163 (345)
93 KOG4510 Permease of the drug/m 94.4 0.056 1.2E-06 50.7 4.6 119 139-259 204-323 (346)
94 PF00893 Multi_Drug_Res: Small 94.4 0.18 3.8E-06 40.1 6.9 45 361-405 48-93 (93)
95 KOG1441 Glucose-6-phosphate/ph 93.0 0.36 7.9E-06 47.2 7.8 131 129-261 166-307 (316)
96 PF06379 RhaT: L-rhamnose-prot 92.4 4.9 0.00011 39.5 14.4 143 268-422 6-161 (344)
97 PF10639 UPF0546: Uncharacteri 92.2 0.86 1.9E-05 37.5 7.7 50 362-411 61-111 (113)
98 COG4975 GlcU Putative glucose 92.1 0.067 1.4E-06 49.7 1.2 133 269-417 2-139 (288)
99 KOG2765 Predicted membrane pro 87.8 0.43 9.2E-06 47.1 2.9 73 345-417 162-234 (416)
100 KOG1580 UDP-galactose transpor 87.1 1.1 2.4E-05 41.5 4.9 73 187-259 239-311 (337)
101 COG5070 VRG4 Nucleotide-sugar 85.6 6.3 0.00014 36.3 8.9 122 136-258 165-293 (309)
102 KOG4314 Predicted carbohydrate 85.4 0.45 9.7E-06 42.8 1.5 63 355-417 66-128 (290)
103 KOG1444 Nucleotide-sugar trans 84.7 24 0.00051 34.4 12.9 131 271-414 14-149 (314)
104 KOG4831 Unnamed protein [Funct 78.2 4 8.7E-05 32.9 4.3 64 197-260 60-124 (125)
105 KOG2922 Uncharacterized conser 75.7 2.1 4.6E-05 41.5 2.6 119 266-414 18-136 (335)
106 PF04342 DUF486: Protein of un 71.8 46 0.00099 27.0 8.8 60 199-258 45-105 (108)
107 KOG2766 Predicted membrane pro 70.9 1.3 2.7E-05 41.7 -0.2 59 355-413 91-149 (336)
108 COG3169 Uncharacterized protei 67.8 61 0.0013 25.9 10.5 30 230-259 84-113 (116)
109 KOG3912 Predicted integral mem 67.6 12 0.00026 35.8 5.5 53 361-413 105-157 (372)
110 PRK02237 hypothetical protein; 66.7 11 0.00024 30.6 4.3 46 371-416 62-107 (109)
111 KOG1582 UDP-galactose transpor 63.9 68 0.0015 30.7 9.6 121 144-264 208-335 (367)
112 PF04342 DUF486: Protein of un 62.7 54 0.0012 26.5 7.5 32 380-411 74-105 (108)
113 PF02694 UPF0060: Uncharacteri 62.2 12 0.00026 30.3 3.8 45 371-415 60-104 (107)
114 PF05297 Herpes_LMP1: Herpesvi 50.0 5.4 0.00012 38.0 0.0 92 213-307 47-146 (381)
115 PF11139 DUF2910: Protein of u 49.2 2.1E+02 0.0045 26.1 11.5 37 223-259 160-209 (214)
116 KOG1583 UDP-N-acetylglucosamin 48.9 1.5E+02 0.0032 28.6 9.3 124 136-260 174-313 (330)
117 COG2271 UhpC Sugar phosphate p 47.1 1.9E+02 0.0041 29.8 10.3 130 269-417 66-208 (448)
118 PF06379 RhaT: L-rhamnose-prot 45.9 3.1E+02 0.0068 27.2 25.7 104 186-289 70-193 (344)
119 COG4147 DhlC Predicted symport 37.5 2.8E+02 0.0061 29.0 9.8 62 361-422 441-514 (529)
120 COG3169 Uncharacterized protei 36.7 2.2E+02 0.0048 22.8 10.7 31 381-411 82-112 (116)
121 KOG1442 GDP-fucose transporter 35.8 51 0.0011 31.6 4.1 130 131-260 189-326 (347)
122 PRK02237 hypothetical protein; 35.1 64 0.0014 26.3 4.0 38 224-261 68-105 (109)
123 PF08627 CRT-like: CRT-like; 35.1 1.3E+02 0.0029 25.2 5.9 39 123-161 54-93 (130)
124 KOG2322 N-methyl-D-aspartate r 34.9 2.5E+02 0.0055 26.2 8.4 18 270-287 196-213 (237)
125 PF02694 UPF0060: Uncharacteri 33.9 60 0.0013 26.3 3.6 38 224-261 66-103 (107)
126 COG1575 MenA 1,4-dihydroxy-2-n 33.1 4.7E+02 0.01 25.5 13.5 43 243-285 18-60 (303)
127 PF02673 BacA: Bacitracin resi 32.8 4.4E+02 0.0095 25.1 11.5 56 145-201 100-156 (259)
128 PF07168 Ureide_permease: Urei 30.8 47 0.001 32.3 3.0 136 276-413 3-145 (336)
129 PRK10666 ammonium transporter; 28.9 6.6E+02 0.014 25.9 18.9 47 267-313 303-352 (428)
130 COG3086 RseC Positive regulato 28.4 2E+02 0.0044 24.7 6.1 10 385-394 96-105 (150)
131 PF07444 Ycf66_N: Ycf66 protei 26.3 89 0.0019 24.3 3.3 25 393-417 4-28 (84)
132 cd01324 cbb3_Oxidase_CcoQ Cyto 25.8 91 0.002 21.4 3.0 24 401-424 18-41 (48)
133 PF07123 PsbW: Photosystem II 24.9 89 0.0019 26.5 3.3 32 265-296 102-133 (138)
134 TIGR00905 2A0302 transporter, 24.4 7.8E+02 0.017 25.3 17.2 22 397-418 417-438 (473)
135 PF07857 DUF1632: CEO family ( 23.9 6.3E+02 0.014 24.0 10.3 70 191-260 57-133 (254)
136 PF09656 PGPGW: Putative trans 23.8 1.9E+02 0.0042 20.3 4.3 43 245-292 5-47 (53)
137 COG1346 LrgB Putative effector 23.5 5.2E+02 0.011 24.1 8.3 23 133-155 9-31 (230)
138 KOG1443 Predicted integral mem 23.4 2.5E+02 0.0053 27.6 6.4 49 211-259 265-313 (349)
139 COG1742 Uncharacterized conser 22.6 1E+02 0.0022 25.0 3.0 38 225-262 68-105 (109)
140 COG1299 FruA Phosphotransferas 22.3 7.8E+02 0.017 24.5 12.4 65 219-293 55-119 (343)
141 PF05884 ZYG-11_interact: Inte 21.7 7.5E+02 0.016 24.1 17.9 44 205-249 180-223 (299)
142 PF04246 RseC_MucC: Positive r 21.7 2.1E+02 0.0045 24.0 5.2 19 370-388 69-87 (135)
143 COG1742 Uncharacterized conser 21.2 1.7E+02 0.0037 23.7 4.1 45 371-415 61-105 (109)
144 COG4292 Predicted membrane pro 20.9 4.2E+02 0.0091 26.5 7.5 85 237-321 75-159 (387)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.6e-39 Score=322.84 Aligned_cols=293 Identities=36% Similarity=0.614 Sum_probs=254.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHHHH
Q 014037 123 PALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI--NKELLVILTPVAFCHA 200 (432)
Q Consensus 123 ~~l~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~ 200 (432)
..+++..+++.||++|+..++.||++++.+|+|++++++|++++.+++.++|..+.+++++. .++.++.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999988777776555444444 3457889999999999
Q ss_pred HHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHH
Q 014037 201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIA 280 (432)
Q Consensus 201 ~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~ 280 (432)
..+...+.|++++++++++++++++|+|+++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHhhhcCC-------CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHH---HHhhhchhHHHHHHHHHHH
Q 014037 281 FTYRSIYSKKAMTG-------MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKA---AIAKVGLFKFLSDLFWIGM 350 (432)
Q Consensus 281 ~Al~~vl~kk~~~~-------~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~ 350 (432)
+++++++.||.+++ .++.++..++.+++.++++|+....|++.... .+.+ .........++..++..++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence 99999999998864 44667788889999999999988777643221 1111 0111122234445677789
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 351 ~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
+++++|...|.++++++|.++++.+++||++++++|+++|||++|+.+++|.+++++|+++|++.|
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999764
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=6.6e-39 Score=313.12 Aligned_cols=292 Identities=57% Similarity=0.956 Sum_probs=249.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014037 126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVM 205 (432)
Q Consensus 126 ~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 205 (432)
++.+++++||++|.+.+++||++++++++|+.++++|++++.+.+.+.+..+.+++++.++++++.+++.|++++++..+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999887766654444555667888999999999999999999
Q ss_pred HHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHH
Q 014037 206 SNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRS 285 (432)
Q Consensus 206 ~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~ 285 (432)
.|++++|+++++++++++++|+++++++++++|||++++++.+++++++|+++....+.+++..|++++++++++|+++.
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777788889999999999999999
Q ss_pred HHHhhhcC--CCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHH-HHHHHHHHHHHH
Q 014037 286 IYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM-FYHLYNQLATNT 362 (432)
Q Consensus 286 vl~kk~~~--~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~ 362 (432)
++.||..+ ++|+.++..|+...+.++++|.....|++.....++.+..........+...+..+. ++..+|...+..
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 789999999999999999999988777654332222111111111122322333333 555667777789
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 363 LERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 363 l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
+++++|.+.++.++++|++++++|++++||++++.+++|.+++++|+++|+..|.
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999997654
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-40 Score=315.70 Aligned_cols=292 Identities=39% Similarity=0.574 Sum_probs=260.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHHH
Q 014037 124 ALVTGFFFFMWYFLNVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI-NKELLVILTPVAFCHA 200 (432)
Q Consensus 124 ~l~~~~~~~~w~~~s~~~~~~nK~~l~--~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~ 200 (432)
.+..+.++..|++++++.+++||++++ +||+|++++.+|++++.+.+.+.+..+..+..+. ++..+..++++|++++
T Consensus 15 ~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~ 94 (316)
T KOG1441|consen 15 ILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFC 94 (316)
T ss_pred hHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHH
Confidence 667788899999999999999999999 8999999999999999999888888887766665 4468999999999999
Q ss_pred HHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHH
Q 014037 201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIA 280 (432)
Q Consensus 201 ~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~ 280 (432)
+++++.|.++.++||+++|++|+++|++++++++++.+|++++..++++++++.||.+++.+|.++|+.|++.++++++.
T Consensus 95 ~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~ 174 (316)
T KOG1441|consen 95 ISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLA 174 (316)
T ss_pred HHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcC----CCCchhHHHHHHHHHHHHHH-HHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 014037 281 FTYRSIYSKKAMT----GMDSTNVYAYTSIIALLFCI-PPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY 355 (432)
Q Consensus 281 ~Al~~vl~kk~~~----~~~~~~~~~~~~~~~~~~l~-p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 355 (432)
.++++++.|++++ +.|+++++.|+++++.+.++ |.....|+... . ++.. ..... ..+.. +...++++++
T Consensus 175 ~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~-~~~~~-~~~sv~~f~~ 248 (316)
T KOG1441|consen 175 FALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFV-TFLIL-LLNSVLAFLL 248 (316)
T ss_pred HHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccch-hhHHH-HHHHHHHHHH
Confidence 9999999999884 37899999999999999999 88887777665 1 1111 01111 12323 3334999999
Q ss_pred HHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhHH
Q 014037 356 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANMEE 421 (432)
Q Consensus 356 ~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~~ 421 (432)
|+..|.+++++||+|+++.+.+|++++++.|+++|++++|+.+..|++++++|+++|++.|.+.++
T Consensus 249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999998876554
No 4
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=9.1e-27 Score=218.95 Aligned_cols=291 Identities=15% Similarity=0.198 Sum_probs=253.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 014037 129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSV--IHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMS 206 (432)
Q Consensus 129 ~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 206 (432)
...+.|+..++.+.+.||++++.++||..+.. .|.+++.+.+.+.-..+..+.++.+++..+.++|+.+++.++...+
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~ 94 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG 94 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence 44556777778999999999999999888777 9999999888888888888888999999999999999999999999
Q ss_pred HHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHHH
Q 014037 207 NVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSI 286 (432)
Q Consensus 207 ~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~v 286 (432)
..+++|+++++++++|..+|+++++.+..++|.+++...|.++....+|......+|.+++..|+.|++...++.+.+.+
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v 174 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVV 174 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcC--CCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014037 287 YSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLE 364 (432)
Q Consensus 287 l~kk~~~--~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~ 364 (432)
+.||..+ +.+.+.+++|.++++++.+....++.+++.-.. ...+......++..+.++|++++..++..+++.+
T Consensus 175 ~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~----~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~ 250 (314)
T KOG1444|consen 175 YVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS----LNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR 250 (314)
T ss_pred HHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH----hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998775 466789999999999999888887776654111 1112222235677788999999999999999999
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhHHhH
Q 014037 365 RVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANMEEGK 423 (432)
Q Consensus 365 ~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~~~~ 423 (432)
.+|+++.++++..+...+.+...+++|++.++.+++|..+.++|..+|++.+.++++.+
T Consensus 251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 99999999999666666666666677788999999999999999999999886665443
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=1.3e-27 Score=221.39 Aligned_cols=289 Identities=19% Similarity=0.298 Sum_probs=245.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-C--CCC-CCCCCH-HHHHHHHHHHHH
Q 014037 124 ALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTV-G--LPQ-RAPINK-ELLVILTPVAFC 198 (432)
Q Consensus 124 ~l~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~--~~~-~~~~~~-~~~~~~l~~~~~ 198 (432)
+.....++.+||+++++..+++|+.-.+|++|.+++.+|+++-.++....... + .++ +...++ ++.+++.|.+++
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 45556677999999999999999999999999999999998877664433221 1 111 223344 577888999999
Q ss_pred HHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHH
Q 014037 199 HALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 278 (432)
Q Consensus 199 ~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~ 278 (432)
.+++..+.|+++.|++++++++.|+..++|+.+++.++.=|++++.-.+.+.++.+|+.+.++.+.+||..|+.++++++
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS 173 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS 173 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCC-----CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhch---hHHHHHHHHHHH
Q 014037 279 IAFTYRSIYSKKAMTG-----MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGL---FKFLSDLFWIGM 350 (432)
Q Consensus 279 l~~Al~~vl~kk~~~~-----~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~---~~~~~~l~~~g~ 350 (432)
++.+++..+.|+++++ -+|.+..++..+...+.++|..+.+||+.... +...+...+. ......+...|.
T Consensus 174 ~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~--~s~~f~~~d~~~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 174 LLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT--SSSIFRFQDTGLILRVIGLISLGGL 251 (349)
T ss_pred HhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch--hhhHHHhcCccHHHHHHHHHHHHHH
Confidence 9999999999998875 35899999999999999999999999976532 1122222222 223334555677
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 351 ~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
..++.....+.++.+++.++.++.+..|.+.+.++++++.+|.++..++.|..+++.|+..|..
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 8888888899999999999999999999999999999999999999999999999999999943
No 6
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=9.5e-26 Score=223.67 Aligned_cols=287 Identities=12% Similarity=0.089 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 014037 129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTV-GL-PQRAPINKELLVILTPVAFCHALGHVMS 206 (432)
Q Consensus 129 ~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 206 (432)
..++.--....++..+.|..++..-.|..+.++|++++++++.++.+. ++ ++.++.+++.+..+...|++.++...+.
T Consensus 16 ~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~ 95 (358)
T PLN00411 16 TAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITG 95 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 444455566678889999999864348889999999999877755432 22 2223335667777777787765566789
Q ss_pred HHHhhccchhHHHHHhhhhHHHHHHHHHHH------ccCccChhhHHHHhHHhhhhhhhccC-Cc---------------
Q 014037 207 NVSFATVAVSFTHTIKALEPFFNAAASQFV------LGHQIPLSLWLSLAPVVIGVSMASLT-EL--------------- 264 (432)
Q Consensus 207 ~~al~~v~vs~~~ii~s~~Pvft~ils~~~------l~e~~~~~~~lsl~~~~~Gv~l~~~~-~~--------------- 264 (432)
++|++|++++.+.++.++.|++++++++++ ++||+++.+++|++++++|+.+.... +.
T Consensus 96 ~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~ 175 (358)
T PLN00411 96 YIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQ 175 (358)
T ss_pred HHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccc
Confidence 999999999999999999999999999999 69999999999999999999876531 11
Q ss_pred --------ccc-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCch-hHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHh
Q 014037 265 --------SFN-WTGFISAMISNIAFTYRSIYSKKAMTGMDST-NVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIA 334 (432)
Q Consensus 265 --------~~~-~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~-~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~ 334 (432)
..+ ..|.+++++++++||+++++.||..+++++. ...++++.++.+.+.+.....|..+... |. .
T Consensus 176 ~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~--~~---~ 250 (358)
T PLN00411 176 LSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV--WI---I 250 (358)
T ss_pred cccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc--ce---e
Confidence 112 4599999999999999999999998887654 5566777777666666665555421111 00 0
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 335 KVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 335 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
..+. .++ .++..+++..+.....++++++.+|...+++.++.|++++++|++++||++++.+++|++++++|+++.+.
T Consensus 251 ~~~~-~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 251 HFDI-TLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred ccch-HHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 0011 111 12222332222233344899999999999999999999999999999999999999999999999999887
Q ss_pred hhhhhHHh
Q 014037 415 IKANMEEG 422 (432)
Q Consensus 415 ~k~~~~~~ 422 (432)
.++++.++
T Consensus 329 ~~~~~~~~ 336 (358)
T PLN00411 329 GKANEEKD 336 (358)
T ss_pred hhhhhhhh
Confidence 65544433
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.95 E-value=2e-25 Score=217.94 Aligned_cols=278 Identities=19% Similarity=0.296 Sum_probs=224.4
Q ss_pred HHHHHHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014037 136 FLNVIFNILNKKVYNY--F-PYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFAT 212 (432)
Q Consensus 136 ~~s~~~~~~nK~~l~~--f-~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~ 212 (432)
++.....++++++.+. . ++|+++++.|+++..+...+...... .++.++..++.+++.++++.++..++|.+++|
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 87 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKY 87 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334556777777763 2 36999999999999887665443332 23335566788889999999999999999999
Q ss_pred cchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCcc----cc------HHHHHHHHHHHHHHH
Q 014037 213 VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELS----FN------WTGFISAMISNIAFT 282 (432)
Q Consensus 213 v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~----~~------~~G~l~~l~s~l~~A 282 (432)
+|.++.+++|++.|+++++++++++|||+++.++++++++++|+++....|.. .+ ..|+++.+++.++.+
T Consensus 88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a 167 (303)
T PF08449_consen 88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDA 167 (303)
T ss_pred CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988765421 11 239999999999999
Q ss_pred HHHHHHhhhcCC--CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 014037 283 YRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLAT 360 (432)
Q Consensus 283 l~~vl~kk~~~~--~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 360 (432)
++.++++|..++ .++.++++|.+.++.++..+.....+..+. ...+ +... ..+..+..++..++++.+.+...+
T Consensus 168 ~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~-~~~~-~f~~--~~p~~~~~l~~~s~~~~~g~~~i~ 243 (303)
T PF08449_consen 168 FTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEF-RSAI-RFIS--AHPSVLLYLLLFSLTGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHh-hHHH-HHHH--HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999864 568999999999999998877776321111 1111 1011 122355666777788777777778
Q ss_pred HHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhh
Q 014037 361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANM 419 (432)
Q Consensus 361 ~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~ 419 (432)
.++++.+|++.+++.++++++++++|+++||+++++.+++|+++++.|..+|++.|+++
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 89999999999999999999999999999999999999999999999999999887654
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.94 E-value=2.5e-24 Score=209.47 Aligned_cols=269 Identities=14% Similarity=0.089 Sum_probs=194.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 014037 124 ALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGH 203 (432)
Q Consensus 124 ~l~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 203 (432)
.+...+.+++| .......|..++++| |..++++|+.++.+++.+.. ..++. +++.++..+..++.+++.+
T Consensus 6 ~l~~l~a~~~W----g~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~~---~~~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 6 TLIGLIAILLW----STMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPRL---RQFPKRYLLAGGLLFVSYE 75 (295)
T ss_pred hHHHHHHHHHH----HHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--ccccc---ccccHHHHHHHhHHHHHHH
Confidence 44455666677 455678999999998 99999999999988766542 22221 1222333444455566667
Q ss_pred HHHHHHhhc----cchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCcc-----------ccH
Q 014037 204 VMSNVSFAT----VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELS-----------FNW 268 (432)
Q Consensus 204 ~l~~~al~~----v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~-----------~~~ 268 (432)
.+.+.++++ .++..+.++.++.|+++++++++++|||++++++++++++++|+.++..++.+ .+.
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP 155 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccCh
Confidence 777777754 57778889999999999999999999999999999999999999887654321 235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 014037 269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (432)
Q Consensus 269 ~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (432)
.|.+++++++++||.++++.||..++.++..... ..+.+.+.+.....+.+. ....+ ..+..++..
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-~~~~~----------~~~~~l~~~ 221 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPA-MVFSL----------PAIIKLLLA 221 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCcc-ccCCH----------HHHHHHHHH
Confidence 6999999999999999999999988888765432 223333333333322211 11111 112222333
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 349 g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
|+...+.....++.+++.+|.+.++..+++|+++++++++++||++++.+++|+++++.|+++....+
T Consensus 222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 33333333344489999999999999999999999999999999999999999999999998775433
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.93 E-value=4.9e-23 Score=200.17 Aligned_cols=264 Identities=16% Similarity=0.134 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHh-hccchh
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSF-ATVAVS 216 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~al-~~v~vs 216 (432)
....+..|...++.+ |..++++|++++.+++++....++.+ ..+++.++.....|.+. .....+.+++. ++++++
T Consensus 21 g~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~ 97 (292)
T PRK11272 21 GSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSG 97 (292)
T ss_pred hhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH
Confidence 566788999998888 99999999999988776654433222 22456666666677654 55677888898 999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC-CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNIAFTYRSIYSKKAMTGM 295 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~-~~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~ 295 (432)
.+.++.++.|+++++++++ +|||++++++.+++++++|+.+...+ +.+.+..|.+++++++++||.+.++.||..++
T Consensus 98 ~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~- 175 (292)
T PRK11272 98 IAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP- 175 (292)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 9999999999999999985 69999999999999999999887643 33456789999999999999999999997643
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH-HHHHHHHhhccChhHHHHH
Q 014037 296 DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY-NQLATNTLERVAPLTHAVG 374 (432)
Q Consensus 296 ~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~l~~~sa~t~sv~ 374 (432)
++.....++...+.+.+.+.....+.+.....+. ..+..++..+++.... ....+..+++.++.+.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~ 245 (292)
T PRK11272 176 VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTL----------SGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSY 245 (292)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 4455667888888888777765443321110000 1122233333333222 2333478899999999999
Q ss_pred HHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 375 NVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 375 ~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
.+++|+++++++++++||++++.+++|+++++.|+++.+..++
T Consensus 246 ~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 246 AYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998765433
No 10
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.93 E-value=7.3e-23 Score=199.07 Aligned_cols=255 Identities=15% Similarity=0.117 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFT 218 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~ 218 (432)
.......|+.++++| |..+.++|++++.+++.+....+. .+.+++.++..+..|++......+.+++++++|++.+
T Consensus 25 ~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a 100 (293)
T PRK10532 25 QSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIA 100 (293)
T ss_pred HhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 344567999999988 999999999999987766543221 2235666777777888888888889999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC--C-ccccHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 014037 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNIAFTYRSIYSKKAMTGM 295 (432)
Q Consensus 219 ~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~--~-~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~ 295 (432)
.++..+.|+++++++. |+... ..++.++++|+.++... + .+.+..|.+++++++++||.+.++.||..++.
T Consensus 101 ~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~ 174 (293)
T PRK10532 101 VALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEH 174 (293)
T ss_pred HHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999988763 55544 34566778998876432 2 23457899999999999999999999998877
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHH-HHHHHhhccChhHHHHH
Q 014037 296 DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQ-LATNTLERVAPLTHAVG 374 (432)
Q Consensus 296 ~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~l~~~sa~t~sv~ 374 (432)
++... .+...++.+++.|.....+..... ++ ..+..++..|++.....+ ..++.+++++|.+.+++
T Consensus 175 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~--~~----------~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~ 241 (293)
T PRK10532 175 GPATV-AIGSLIAALIFVPIGALQAGEALW--HW----------SILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTL 241 (293)
T ss_pred CchHH-HHHHHHHHHHHHHHHHHccCcccC--CH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Confidence 77665 466677777777766543321110 00 111122334444333222 33488999999999999
Q ss_pred HHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 375 NVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 375 ~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
.+++|+++++++++++||++++.+++|++++++|++.+...+
T Consensus 242 ~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 242 MSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999987654
No 11
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.92 E-value=1.1e-22 Score=194.17 Aligned_cols=252 Identities=16% Similarity=0.164 Sum_probs=195.9
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHhhccchhHH
Q 014037 140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA-FCHALGHVMSNVSFATVAVSFT 218 (432)
Q Consensus 140 ~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~~al~~v~vs~~ 218 (432)
...+..|+.+++...|..+++.|++++.+++.+....+ .++++++..+..+ ++..++..+.++|+++++++.+
T Consensus 3 ~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 76 (260)
T TIGR00950 3 TTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA 76 (260)
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence 34567899888655588999999998888766654432 1333444444444 5678888999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC-ccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 014037 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDS 297 (432)
Q Consensus 219 ~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~-~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~ 297 (432)
.++.++.|+++++++.+++|||++++++.+++++++|+.+....+ .+.+..|++++++++++|+.+.++.||..++.++
T Consensus 77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~ 156 (260)
T TIGR00950 77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP 156 (260)
T ss_pred HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence 999999999999999999999999999999999999998875443 4556789999999999999999999999887774
Q ss_pred h--hHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHHHH
Q 014037 298 T--NVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH-LYNQLATNTLERVAPLTHAVG 374 (432)
Q Consensus 298 ~--~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~l~~~sa~t~sv~ 374 (432)
. ....+.+..+.+++.|.....+.+... .. ..+..++..+++.. ......++++++.++.+.++.
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~ 224 (260)
T TIGR00950 157 ELLQFTGWVLLLGALLLLPFAWFLGPNPQA--LS----------LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASIL 224 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--ch----------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 4 444467888888888776654432211 00 11222333444332 223334478999999999999
Q ss_pred HHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHH
Q 014037 375 NVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGV 409 (432)
Q Consensus 375 ~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv 409 (432)
.+++|+++++++++++||++++.+++|+++++.|+
T Consensus 225 ~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 225 ALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999886
No 12
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=8e-26 Score=206.11 Aligned_cols=293 Identities=18% Similarity=0.275 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHHHHHHh--------CCCCCCCCCHHHHHHHHHHH
Q 014037 129 FFFFMWYFLNVIFNILNKKVYNY----FPYPYFVSVIHLLVGVVYCLVSWTV--------GLPQRAPINKELLVILTPVA 196 (432)
Q Consensus 129 ~~~~~w~~~s~~~~~~nK~~l~~----f~~P~~lt~~r~~~~~l~l~~~~~~--------~~~~~~~~~~~~~~~~l~~~ 196 (432)
.....++.+++.+.+.||++++. .+.|.++++.|.++...+++.+... ..++ .+.+.+..+.++|.+
T Consensus 31 ~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~-~~ldl~t~r~vlpls 109 (347)
T KOG1442|consen 31 SAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPS-LQLDLATARQVLPLS 109 (347)
T ss_pred hhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCc-ccccHHHHHhhcchh
Confidence 44556778889999999999984 6789999999999998887754332 1122 235667788899999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC---ccccHHHHHH
Q 014037 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTGFIS 273 (432)
Q Consensus 197 ~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~---~~~~~~G~l~ 273 (432)
+.+.+++.++|++|+|++++++++-|+++.+|+++++++++||+-+.....+..++++|..+-.-.| ..+++.|.++
T Consensus 110 vVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gvif 189 (347)
T KOG1442|consen 110 VVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIF 189 (347)
T ss_pred heeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHH
Confidence 9999999999999999999999999999999999999999999999999999999999998887766 4567999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCC--chhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHH
Q 014037 274 AMISNIAFTYRSIYSKKAMTGMD--STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMF 351 (432)
Q Consensus 274 ~l~s~l~~Al~~vl~kk~~~~~~--~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 351 (432)
++.++++-|+..++.||.....+ -+.+.+|+++.+.++.+|...+.+..+-... ++......+|..+.++|++
T Consensus 190 GVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~-----~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 190 GVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG-----FPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred HHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC-----cccchHHHHHHHHHHHHHH
Confidence 99999999999999999876543 5788999999999999998887643322110 0122234688888999999
Q ss_pred HHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhHHhHHhhh
Q 014037 352 YHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANMEEGKRKAA 427 (432)
Q Consensus 352 ~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~~~~~~~~ 427 (432)
++..++...+.++.+||+|+++-++.|-....++++.+++|..+..-|-|-++++.|..+|.+.|+++.+++.+++
T Consensus 265 gF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~ 340 (347)
T KOG1442|consen 265 GFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQR 340 (347)
T ss_pred HHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999887665554443
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.92 E-value=3.5e-23 Score=201.46 Aligned_cols=274 Identities=12% Similarity=0.136 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHHHHhCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 014037 139 VIFNILNKKVYNY-FPYPYFVSVIHLLVGVVYCLVSWTVGLP--QRAPINKELLVILTPVAFCHALGHVMSNVSFATVAV 215 (432)
Q Consensus 139 ~~~~~~nK~~l~~-f~~P~~lt~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~v 215 (432)
.+.+..+..+-++ ...|.+.+++.++.-.++.......+.. +..+..+++|++.+..+++...++.+.+.|++|+++
T Consensus 26 ~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsv 105 (334)
T PF06027_consen 26 TGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSV 105 (334)
T ss_pred HhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccH
Confidence 3445555555553 5678888888776655443332222221 222233456677777899999999999999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc---------cccHHHHHHHHHHHHHHHHHHH
Q 014037 216 SFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNIAFTYRSI 286 (432)
Q Consensus 216 s~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~---------~~~~~G~l~~l~s~l~~Al~~v 286 (432)
+.++++.++..+|+++++++++|+|+++.+++|++++++|+.++...|. +....|.+++++++++||++++
T Consensus 106 tS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV 185 (334)
T PF06027_consen 106 TSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNV 185 (334)
T ss_pred hHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998765542 1237899999999999999999
Q ss_pred HHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014037 287 YSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERV 366 (432)
Q Consensus 287 l~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~ 366 (432)
+.|+..++.+..+.+.+..++++++..+.....|..++....|.. .....++..+++.+......-..++..
T Consensus 186 ~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~--------~~~~~~v~~~~~lf~~y~l~p~~l~~s 257 (334)
T PF06027_consen 186 LEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS--------QVIGLLVGYALCLFLFYSLVPIVLRMS 257 (334)
T ss_pred HHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh--------hhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999998888777766554433321 112222222333333333334578899
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhH
Q 014037 367 APLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANME 420 (432)
Q Consensus 367 sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~ 420 (432)
+|+..++......++++++++++||+++++..++|.++++.|.++|+..+.+.+
T Consensus 258 sAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~ 311 (334)
T PF06027_consen 258 SATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE 311 (334)
T ss_pred ccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence 999999988889999999999999999999999999999999999997765443
No 14
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.92 E-value=1.8e-22 Score=196.87 Aligned_cols=275 Identities=12% Similarity=0.230 Sum_probs=195.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHH
Q 014037 125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHA-LGH 203 (432)
Q Consensus 125 l~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~ 203 (432)
+......++| .......|..+++++ |..++++|+.++++.+.+... +++ .+ ++..+..+++.. ...
T Consensus 7 l~~l~~~~~W----g~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~---~~---~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 7 VLALLVVVVW----GLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK---VP---LNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHH----hhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC---Cc---hHHHHHHHHHHHHHHH
Confidence 3444556666 455677899998888 999999999997765544331 111 12 223344455433 344
Q ss_pred HHHHHHhhc-cchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC---ccccHHHHHHHHHHHH
Q 014037 204 VMSNVSFAT-VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNI 279 (432)
Q Consensus 204 ~l~~~al~~-v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~---~~~~~~G~l~~l~s~l 279 (432)
.+.+.++++ ++++.+.++.++.|+++.+++++++|||++++++++++++++|+.+...++ .+.++.|+++++++++
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal 153 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF 153 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence 566788887 689999999999999999999999999999999999999999998776432 2334679999999999
Q ss_pred HHHHHHHHHhhhcCCCCc---hhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 014037 280 AFTYRSIYSKKAMTGMDS---TNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYN 356 (432)
Q Consensus 280 ~~Al~~vl~kk~~~~~~~---~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 356 (432)
+|+.+.++.||..++.+. .....+....+.+.+.......|++......+ ...+. ..+..+++.|++.....
T Consensus 154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~l~i~~t~~~ 228 (299)
T PRK11453 154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL----VTIDM-TTILSLMYLAFVATIVG 228 (299)
T ss_pred HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh----ccCCH-HHHHHHHHHHHHHHHHH
Confidence 999999999998655433 23344555555444443333444432211000 01111 23444455555544433
Q ss_pred HH-HHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 357 QL-ATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 357 ~~-~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
+. .++.+++.++.+.++...++|+++++++++++||+++..+++|++++++|+++-.+.++
T Consensus 229 ~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 229 YGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 32 33788999999999999999999999999999999999999999999999988765443
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.92 E-value=2.7e-22 Score=195.32 Aligned_cols=261 Identities=13% Similarity=0.094 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRA----PINKELLVILTPVAFCHALGHVMSNVSFATVA 214 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~ 214 (432)
.......|.. .+.+ |..++++|++++.+++.+.+..+.++.. ..+++.+...+..+++.+.+..+.++|++++|
T Consensus 21 g~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 98 (296)
T PRK15430 21 GIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHH 98 (296)
T ss_pred HHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3445566875 5677 9999999999998766554432221100 01233333344455667788999999999999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 014037 215 VSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTG 294 (432)
Q Consensus 215 vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~ 294 (432)
++.+.++..+.|+++++++++++|||+++++++++++++.|+.++..++.+.. +++++++++||.+.++.||...+
T Consensus 99 ~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~~ 174 (296)
T PRK15430 99 MLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKIAVE 174 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999998764332222 45778899999999999997543
Q ss_pred CC--chhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHH
Q 014037 295 MD--STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHA 372 (432)
Q Consensus 295 ~~--~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~s 372 (432)
.. ......|..+.+.+...+.. ........ ...+ ..+..+...|+.....+...+..+++.+|.+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~~~-~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s 243 (296)
T PRK15430 175 AQTGMLIETMWLLPVAAIYLFAIA--DSSTSHMG--------QNPM-SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLG 243 (296)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHc--cCCccccc--------CCcH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 22 22333444444444322211 11110000 0000 111222333333333334445899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 373 VGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 373 v~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
+..+++|+++++++++++||++++.+++|++++++|+.+.....
T Consensus 244 ~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 244 FFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888776543
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.87 E-value=8.7e-20 Score=176.43 Aligned_cols=260 Identities=15% Similarity=0.147 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVG--LPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVS 216 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs 216 (432)
...++..|...++-+ + ..+++...+.+++.+....+ .++.++.+++.+...+..++.......+.+.++++.+++
T Consensus 14 a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 14 AGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 566788887776532 3 23556655655555443322 222233344455555666677888889999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc-cccHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-SFNWTGFISAMISNIAFTYRSIYSKKAMTGM 295 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~-~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~ 295 (432)
.+..+..+.|+++++++++++||++++++++|++++++|+.+...++. +.+..|+.++++++++|+.+.++.|+..++.
T Consensus 91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~ 170 (281)
T TIGR03340 91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGV 170 (281)
T ss_pred hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccch
Confidence 999999999999999999999999999999999999999988765432 3456788899999999999999999876555
Q ss_pred CchhHHHHHHHHHHHHH-HHHHHHh---cchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH
Q 014037 296 DSTNVYAYTSIIALLFC-IPPAVLI---EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH 371 (432)
Q Consensus 296 ~~~~~~~~~~~~~~~~l-~p~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~ 371 (432)
++.....+....+.+.. .|..... +...... ... ..+..+...++...+.+...+..+++.++.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~ 240 (281)
T TIGR03340 171 PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFP-------YAR---QILPSATLGGLMIGGAYALVLWAMTRLPVATV 240 (281)
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHHHhccchhh-------hHH---HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEE
Confidence 54321111122222221 2222211 1111100 000 11222222233333333344578899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHH
Q 014037 372 AVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAI 411 (432)
Q Consensus 372 sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~l 411 (432)
+...++.|+++++++++++||+++..+++|+++++.|+.+
T Consensus 241 ~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 241 VALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999875
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.83 E-value=2.9e-17 Score=158.31 Aligned_cols=263 Identities=18% Similarity=0.213 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFT 218 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~ 218 (432)
.......|...++...+....+.|++.+.+........+.....+..++.++..+..++.......+.+.++++++++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (292)
T COG0697 20 GLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVA 99 (292)
T ss_pred HHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 44555666666653325566666988888773333322211112212223345555667788888999999999999999
Q ss_pred HHHhhhhHHHHHHHHH-HHccCccChhhHHHHhHHhhhhhhhccCCcccc---HHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 014037 219 HTIKALEPFFNAAASQ-FVLGHQIPLSLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNIAFTYRSIYSKKAMTG 294 (432)
Q Consensus 219 ~ii~s~~Pvft~ils~-~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~---~~G~l~~l~s~l~~Al~~vl~kk~~~~ 294 (432)
+++.++.|+++.+++. +++|||+++.++.++++++.|+.++..++...+ ..|.+++++++++++++.++.|+.. +
T Consensus 100 ~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~ 178 (292)
T COG0697 100 SLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R 178 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9999999999999997 777999999999999999999999987765443 5899999999999999999999987 6
Q ss_pred CCchhHHH-HHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHH
Q 014037 295 MDSTNVYA-YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH-LYNQLATNTLERVAPLTHA 372 (432)
Q Consensus 295 ~~~~~~~~-~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~l~~~sa~t~s 372 (432)
.++..... +.......+..+.. .+... ..... ..+..+...|+... ......+..+++.++...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~----------~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 179 LGPVTLALLLQLLLALLLLLLFF--LSGFG-APILS----------RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 66666655 44332222222221 11111 11111 11222333333333 2333444788999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHh
Q 014037 373 VGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 373 v~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~ 415 (432)
+...+.++.+++++++++||+++..+++|+++++.|+.+.+..
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999998765
No 18
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.83 E-value=2e-19 Score=159.75 Aligned_cols=280 Identities=16% Similarity=0.181 Sum_probs=230.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 014037 131 FFMWYFLNVIFNILNKKVYNY--FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNV 208 (432)
Q Consensus 131 ~~~w~~~s~~~~~~nK~~l~~--f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 208 (432)
++.|++.++.+.+.||++++. |..-..+.+.|-+++.+.+.+.-+.+..+ ++.+..+.++|.+++.+........
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~---fR~t~aK~WfpiSfLLv~MIyt~SK 87 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFLLVVMIYTSSK 87 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh---eehhhhhhhcCHHHHHHHHHHhccc
Confidence 556777889999999999984 55567788888888777666555544332 2345567788899999999999999
Q ss_pred HhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCcc--------ccHHHHHHHHHHHHH
Q 014037 209 SFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELS--------FNWTGFISAMISNIA 280 (432)
Q Consensus 209 al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~--------~~~~G~l~~l~s~l~ 280 (432)
+++|++++.+++.|.++.+.++..+..++|.+.+-....+.++.+..-....++|.+ .| .|++|.....+.
T Consensus 88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls 166 (309)
T COG5070 88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS 166 (309)
T ss_pred ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence 999999999999999999999999999999999999999999999999888888852 33 599999999998
Q ss_pred HHHHHHHHhhhcC--CCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHH
Q 014037 281 FTYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQL 358 (432)
Q Consensus 281 ~Al~~vl~kk~~~--~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 358 (432)
.+.+-..+||..+ +....+.++|...++.++++.+.+++|+|....- +..-....+..++++|++.+...+.
T Consensus 167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~------annl~~d~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNL------ANNLSVDSLMAMFISGLCSVGISYC 240 (309)
T ss_pred HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchh------hcCCChHHHHHHHHHHHHHhhhhhc
Confidence 8888888877543 3446788999999999999999999988754321 1111112355678899999999988
Q ss_pred HHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhH
Q 014037 359 ATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANME 420 (432)
Q Consensus 359 ~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~ 420 (432)
.-++++.++..+.++++.+++....+.|.++||++.+...+..+.+-+....+|.+.|.+++
T Consensus 241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999998999998765433
No 19
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.1e-18 Score=160.60 Aligned_cols=286 Identities=15% Similarity=0.166 Sum_probs=226.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--------hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 014037 125 LVTGFFFFMWYFLNVIFNILNKKVYN--------YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA 196 (432)
Q Consensus 125 l~~~~~~~~w~~~s~~~~~~nK~~l~--------~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (432)
+++.+++..-+..-....++.+.+.+ +|.+|.++.+.|-+.+.++-..... ..+ .....++.++.+...+
T Consensus 13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~-~~k-~~~~~~apl~~y~~is 90 (327)
T KOG1581|consen 13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK-WWK-KELSGVAPLYKYSLIS 90 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh-ccc-ccCCCCCchhHHhHHH
Confidence 33333333333444566677777665 3778999999999998877643322 222 2344556677788889
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc---------ccc
Q 014037 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---------SFN 267 (432)
Q Consensus 197 ~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~---------~~~ 267 (432)
+...+...+.+.||+|++-++..+.|++.-+.++++..++.|+|++..+++..+++.+||.+....+. ..+
T Consensus 91 ~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns 170 (327)
T KOG1581|consen 91 FTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENS 170 (327)
T ss_pred HHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999987754321 245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHH
Q 014037 268 WTGFISAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL 345 (432)
Q Consensus 268 ~~G~l~~l~s~l~~Al~~vl~kk~~~~--~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l 345 (432)
++|+.+.....+++++.+..++++.++ +++++++++.++++++..... +...+. .++. . +.... .+..+..+
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~-~~~a-v-~F~~~--hp~~~~Di 244 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGH-LLPA-V-SFIKE--HPDVAFDI 244 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCC-CchH-H-HHHHc--ChhHHHHH
Confidence 899999999999999999999999874 689999999999999887654 222221 1110 0 11111 23567778
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhh
Q 014037 346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKAN 418 (432)
Q Consensus 346 ~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~ 418 (432)
+..+.++.+.+...|..+++.++++.+.+++.+.++++++|.++||++++..|++|..+++.|..+-.+.|.+
T Consensus 245 ~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 245 LLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 8888888888888889999999999999999999999999999999999999999999999999887776665
No 20
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.81 E-value=2.1e-18 Score=157.51 Aligned_cols=288 Identities=15% Similarity=0.168 Sum_probs=228.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 014037 120 ERFPALVTGFFFFMWYFLNVIFNILNKKVYNY--F-PYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA 196 (432)
Q Consensus 120 ~~~~~l~~~~~~~~w~~~s~~~~~~nK~~l~~--f-~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (432)
++.++.+..+++...++.-.....+.+++++. | |+-|.+|+.|+++-..+.++.+..-..++ ....|+.+..++
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~---r~iP~rtY~~la 113 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR---RVIPWRTYVILA 113 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccc---eecchhHhhhhH
Confidence 44446666666666666667777889999884 5 48899999999987665554332222222 224567788888
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC----ccccHHHHH
Q 014037 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE----LSFNWTGFI 272 (432)
Q Consensus 197 ~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~----~~~~~~G~l 272 (432)
.+..+.+.+.|-++.|++-++..+.|++.-+-+++.+.++-|+|+++..+.+..+..+|.++....| ++||..|++
T Consensus 114 ~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~ 193 (367)
T KOG1582|consen 114 FLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVM 193 (367)
T ss_pred hhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHH
Confidence 8888899999999999999999999999999999999999999999999999999999999987765 578999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 014037 273 SAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEG-PQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (432)
Q Consensus 273 ~~l~s~l~~Al~~vl~kk~~~~--~~~~~~~~~~~~~~~~~l~p~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (432)
++-.+-++.|+-.-+++|.++. .+..++++|...+|+++++......++ ...+. +-..+....+...++.+
T Consensus 194 mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~------fcaehp~~tyGy~~~~s 267 (367)
T KOG1582|consen 194 MISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWT------FCAEHPVRTYGYAFLFS 267 (367)
T ss_pred HHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhH------HHHhCcHhHHHHHHHHH
Confidence 9999999999988888887763 457899999999999998766665422 21111 11222223455556666
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 350 ~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
+.+++.......+++..+|.+...+.+.++.+++++|+++|.+++|.+...|..+++.|+++--+.|
T Consensus 268 ~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 268 LAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 7777776667788899999999999999999999999999999999999999999999999866655
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.80 E-value=6.3e-17 Score=154.30 Aligned_cols=243 Identities=12% Similarity=0.038 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCC----C-CCCCHH-HHHHHHHHHHH
Q 014037 126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW-TVGLPQ----R-APINKE-LLVILTPVAFC 198 (432)
Q Consensus 126 ~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~-~~~~~~----~-~~~~~~-~~~~~l~~~~~ 198 (432)
...+..++| ....+..|. ..+.+ |..+.++|++++.+++.+.. ..++++ + ++.+++ .+..+...|++
T Consensus 6 ~~i~a~~~w----g~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 6 VSLLASFLF----GYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred HHHHHHHHH----HHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 334444555 455677888 45677 99999999999987765443 222211 0 111122 23345666777
Q ss_pred HHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHH
Q 014037 199 HALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 278 (432)
Q Consensus 199 ~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~ 278 (432)
..++..+.++++++++++.++++.++.|+|+++++++++|||++++++++++++++|+.+...++.+.+ +++++++
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa 155 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLA 155 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHH
Confidence 888899999999999999999999999999999999999999999999999999999987754332222 3578899
Q ss_pred HHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHH
Q 014037 279 IAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQL 358 (432)
Q Consensus 279 l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 358 (432)
++||.+.+..||..++ +..+...+ .....++..+.....+.+...+.. .. ..|..++..|++..+....
T Consensus 156 ~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~l~~~g~~t~i~~~l 224 (256)
T TIGR00688 156 FSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATVQQTN-----PF----PIWLLLVLAGLITGTPLLA 224 (256)
T ss_pred HHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCcccccC-----ch----hHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 33222211 111111211111111111100000 00 0122223334443333444
Q ss_pred HHHHhhccChhHHHHHHHHHHHHHHHHHHHh
Q 014037 359 ATNTLERVAPLTHAVGNVLKRVFVIGFSIVV 389 (432)
Q Consensus 359 ~~~~l~~~sa~t~sv~~~lk~v~~ills~l~ 389 (432)
.+..+++.++.+.++..+++|+++.++++++
T Consensus 225 ~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 225 FVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999764
No 22
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.80 E-value=7.5e-19 Score=157.36 Aligned_cols=254 Identities=15% Similarity=0.154 Sum_probs=204.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHH
Q 014037 152 FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAA 231 (432)
Q Consensus 152 f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~i 231 (432)
|.|...+.++|..+..++.-+....+ +..+.+...-+.+...++-+.+.++..|.+++|+|-++..+-|++.|+-+++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 66788888999888887755444322 2233444445566777888999999999999999999999999999999999
Q ss_pred HHHHHccCccChhhHHHHhHHhhhhhhhccCCc-------cccHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHH
Q 014037 232 ASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNIAFTYRSIYSKKAMTGM--DSTNVYA 302 (432)
Q Consensus 232 ls~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~-------~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~--~~~~~~~ 302 (432)
++..+.++.++|.++..++.++.||++..+.+. .....|-++.++|-...++....++|.-..+ +...+++
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~ 207 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF 207 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence 999999999999999999999999999876542 2224789999999999999999988875543 3567899
Q ss_pred HHHHHHHHHHHHHHHHh-cchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHH
Q 014037 303 YTSIIALLFCIPPAVLI-EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVF 381 (432)
Q Consensus 303 ~~~~~~~~~l~p~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~ 381 (432)
|+++.+.+.+....++. |.|.... .....+..++.+...++++.+.+...|..+...+|++.+++.+.++.+
T Consensus 208 ~~NlwStL~Lg~g~lfTGElweF~y-------F~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF 280 (337)
T KOG1580|consen 208 YTNLWSTLYLGAGLLFTGELWEFFY-------FVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF 280 (337)
T ss_pred HHHHHHHHHhhhhheehhhHHHHHH-------HHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence 99999999886554443 2232221 111223566777788888888888888999999999999999999999
Q ss_pred HHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 382 VIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 382 ~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
+++.|+++|+++++++||+|.++++.+...-..
T Consensus 281 Til~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 281 TILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 999999999999999999999999998876443
No 23
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.80 E-value=6.6e-17 Score=146.76 Aligned_cols=249 Identities=16% Similarity=0.186 Sum_probs=202.1
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHh
Q 014037 143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK 222 (432)
Q Consensus 143 ~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~ 222 (432)
-+.|.++..++ |.-++++|..++.++++..++ |.+.+.+++.+..++..|+.....+.+++.++..+|.+.+..+.
T Consensus 29 s~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R---Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE 104 (292)
T COG5006 29 SFAKSLFPLVG-AAGVTALRLAIAALILLALFR---PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE 104 (292)
T ss_pred HHHHHHccccC-hhhHHHHHHHHHHHHHHHHhh---HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 35788887777 899999999999988777663 44456778889999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC---CccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchh
Q 014037 223 ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT---ELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTN 299 (432)
Q Consensus 223 s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~---~~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~ 299 (432)
.+-|+.+.+++ .+|..-..|++ +.+.|..+..-. ..+.|..|..+++++..||+.|.+..||..+..+...
T Consensus 105 F~GPL~vA~~~----sRr~~d~vwva--LAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~ 178 (292)
T COG5006 105 FTGPLAVALLS----SRRLRDFVWVA--LAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTA 178 (292)
T ss_pred hccHHHHHHHh----ccchhhHHHHH--HHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCch
Confidence 99999876643 45444444544 466777655422 2456899999999999999999999999988778888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH-HHHHHHHhhccChhHHHHHHHHH
Q 014037 300 VYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY-NQLATNTLERVAPLTHAVGNVLK 378 (432)
Q Consensus 300 ~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~l~~~sa~t~sv~~~lk 378 (432)
-+.+.+.++.++.+|+.....++..... .++...+..++++... +......+++.++-++++...++
T Consensus 179 g~a~gm~vAaviv~Pig~~~ag~~l~~p------------~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLe 246 (292)
T COG5006 179 GVAVGMLVAALIVLPIGAAQAGPALFSP------------SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLE 246 (292)
T ss_pred HHHHHHHHHHHHHhhhhhhhcchhhcCh------------HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhh
Confidence 8899999999999999886655544331 2444455666666554 34455788999999999999999
Q ss_pred HHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 379 RVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 379 ~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
|.++.+.+++++||.+|+.||+|++.+++++.-..
T Consensus 247 Pa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 247 PALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999998887544
No 24
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.76 E-value=1.8e-19 Score=164.24 Aligned_cols=272 Identities=17% Similarity=0.153 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 014037 129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGL-PQRAPINKELLVILTPVAFCHALGHVMSN 207 (432)
Q Consensus 129 ~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 207 (432)
+..+. |++|.++.+..|-+.+ .|..+.-.|+++-.+...++..... +-..+ ....+.++..|++...+..+.+
T Consensus 42 l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG~tgvmlmy 115 (346)
T KOG4510|consen 42 LLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMGFTGVMLMY 115 (346)
T ss_pred ehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhhhhHHHHHH
Confidence 33344 6777777777666654 3888888886665554443322111 10001 1112345567888888999999
Q ss_pred HHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC--------------ccccHHHHHH
Q 014037 208 VSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE--------------LSFNWTGFIS 273 (432)
Q Consensus 208 ~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~--------------~~~~~~G~l~ 273 (432)
+++.|.+.+.+.+|..++|+||.++++.++||++++...++.++.+.||+++..+. .+.+..|...
T Consensus 116 ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~a 195 (346)
T KOG4510|consen 116 YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVA 195 (346)
T ss_pred HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHH
Confidence 99999999999999999999999999999999999999999999999999885321 1224568888
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH
Q 014037 274 AMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH 353 (432)
Q Consensus 274 ~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 353 (432)
++.+.+.-|.-.++.|++.++.|......|.+.++++..+........+++.+.+ .+ +..++..|++++
T Consensus 196 ai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cg-------kd----r~l~~~lGvfgf 264 (346)
T KOG4510|consen 196 AISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCG-------KD----RWLFVNLGVFGF 264 (346)
T ss_pred HHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccc-------cc----eEEEEEehhhhh
Confidence 8888888888889999998999988878888888888776554444444433321 11 122355688888
Q ss_pred HHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 354 LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 354 ~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
..++...+.+++--|-..++..+...+.+.++.+++|||.++++.++|+++++...++....|.
T Consensus 265 igQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 265 IGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred HHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 8888888888877788888899999999999999999999999999999999988887766554
No 25
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=3.1e-18 Score=157.01 Aligned_cols=269 Identities=13% Similarity=0.154 Sum_probs=205.8
Q ss_pred HHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHH
Q 014037 142 NILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSW-TVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFAT-VAVSFT 218 (432)
Q Consensus 142 ~~~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~-v~vs~~ 218 (432)
.+.-+.+.++.| .-..+|+.|+++-++--++.. .+...+ ++.. .+.+.....++...++++|+++++ +|.+..
T Consensus 19 vv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k-~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlH 94 (330)
T KOG1583|consen 19 VVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVK-PKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLH 94 (330)
T ss_pred HHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccC-CCCc---hhhhheehheeeeeeeeccceeeecccceEE
Confidence 345566777665 357899999988776544332 111111 2222 344555566777788999999998 999999
Q ss_pred HHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC---Ccc--------------cc--HHHHHHHHHHHH
Q 014037 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT---ELS--------------FN--WTGFISAMISNI 279 (432)
Q Consensus 219 ~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~---~~~--------------~~--~~G~l~~l~s~l 279 (432)
.++|+..++.+++++++++|+|++..++.+++.+.+|+++.... |.. +- ..|+.+...+.+
T Consensus 95 iIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~ 174 (330)
T KOG1583|consen 95 IIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALL 174 (330)
T ss_pred EEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987532 211 11 258888888888
Q ss_pred HHHHHHHHHhhhcCC--CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhh-------h--chhHHHHHHHHH
Q 014037 280 AFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAK-------V--GLFKFLSDLFWI 348 (432)
Q Consensus 280 ~~Al~~vl~kk~~~~--~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~-------~--~~~~~~~~l~~~ 348 (432)
..|.-.+++++..++ .++-+.++|...++.+.. ++..++-. .+|...... . ..+..|.+++..
T Consensus 175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~F----lf~~~div--~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n 248 (330)
T KOG1583|consen 175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLF----LFMGDDIV--SHWRLAFKSESYLIPLLGFKVPSMWVYLLFN 248 (330)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchH----HHhcchHH--HHHHHHhcCcceeccccCccccHHHHHHHHH
Confidence 888888888887764 578999999999885543 34332211 112222211 1 135677888889
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhH
Q 014037 349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANME 420 (432)
Q Consensus 349 g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~ 420 (432)
.+..+.+.-..+.+-.+++++|.+++-++++.+..++|+++|.+++++..|+|+++++.|.++|.....+.+
T Consensus 249 ~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 249 VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 999999988889999999999999999999999999999999999999999999999999999987665544
No 26
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.73 E-value=1.1e-16 Score=140.25 Aligned_cols=145 Identities=31% Similarity=0.466 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC-------CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhc-hhHH
Q 014037 270 GFISAMISNIAFTYRSIYSKKAMTG-------MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVG-LFKF 341 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl~kk~~~~-------~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~-~~~~ 341 (432)
|++++++|+++.++++++.|+.+++ .+++++++|.++.+.++++|.+.+.|+++..+......-.+.+ ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999987754 5789999999999999999999999988754432211111111 3356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 342 LSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 342 ~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
+..++..|++++++|+..+.+++++||+++++.+.+|++..+++|+++|||++|+.+++|++++++|+++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7777889999999999999999999999999999999999999999999999999999999999999999975
No 27
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.72 E-value=7e-15 Score=142.66 Aligned_cols=261 Identities=19% Similarity=0.212 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 014037 128 GFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW-TVGLPQRAPINKELLVILTPVAFCHALGHVMS 206 (432)
Q Consensus 128 ~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 206 (432)
..-+++| ....+..|++. ..+.++.+ +..++.+++.... ..+.++ ...++.+..-+..|++...++.++
T Consensus 7 lia~~~w----Gs~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~ 76 (290)
T TIGR00776 7 LIPALFW----GSFVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQ 76 (290)
T ss_pred HHHHHHH----hhhHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhH
Confidence 3445555 33445566655 45533332 6666666544332 222222 223455565666778899999999
Q ss_pred HHHhhccchhHHHHHhh-hhHHHHHHHHHHHccCccChhh----HHHHhHHhhhhhhhccCCcc-------cc-HHHHHH
Q 014037 207 NVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSL----WLSLAPVVIGVSMASLTELS-------FN-WTGFIS 273 (432)
Q Consensus 207 ~~al~~v~vs~~~ii~s-~~Pvft~ils~~~l~e~~~~~~----~lsl~~~~~Gv~l~~~~~~~-------~~-~~G~l~ 273 (432)
+.+.++++++.+..+-+ +.++++.+++.+++||+.++++ +++++++++|+++....+.+ .+ ..|+++
T Consensus 77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~ 156 (290)
T TIGR00776 77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL 156 (290)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence 99999999999988887 8889999999999999999999 99999999999987653211 33 689999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCchhHHH---HHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHH
Q 014037 274 AMISNIAFTYRSIYSKKAMTGMDSTNVYA---YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM 350 (432)
Q Consensus 274 ~l~s~l~~Al~~vl~kk~~~~~~~~~~~~---~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 350 (432)
+++++++|+.+.+..|+. +.+|.+..+ +...++..+..+... ...+ . . .+ ..+.. +..|+
T Consensus 157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~-~-~-------~~----~~~~~-~~~Gi 219 (290)
T TIGR00776 157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKP-L-K-------KY----AILLN-ILPGL 219 (290)
T ss_pred HHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccc-h-H-------HH----HHHHH-HHHHH
Confidence 999999999999999987 478887744 333333333332221 0011 0 0 01 12222 23566
Q ss_pred HHHHHHHHHHHHhh-ccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhh----HHHHHHHHHHHHHHHh
Q 014037 351 FYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTG----IGTAVAIAGVAIYSLI 415 (432)
Q Consensus 351 ~~~~~~~~~~~~l~-~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~----iG~~lii~Gv~ly~~~ 415 (432)
+...-+...+...+ +.++.+.++...++|+.+++++++++||+.++.++ +|+++++.|+.+-...
T Consensus 220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 64333444446777 89999999999999999999999999999999999 9999999999876543
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.69 E-value=2.5e-15 Score=141.50 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc--
Q 014037 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-- 264 (432)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~-- 264 (432)
+....+...++++++.+.+.++++++++++++++++.+..++|++++++++|+|+++.+|.++++.+.|+.+...++.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 444556667999999999999999999999999999999999999999999999999999999999999998743221
Q ss_pred -------c--------ccHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHHHHHHHHHHHHHHhcchhhhhh
Q 014037 265 -------S--------FNWTGFISAMISNIAFTYRSIYSKKAMTGM--DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQY 327 (432)
Q Consensus 265 -------~--------~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~--~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~ 327 (432)
+ ....|+++.++++++.++..++.+|.+++. +.+......+..|.++.+......++....+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~ 174 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES 174 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence 1 125899999999999999999999999864 44555556677777776666554444443333
Q ss_pred hHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHH
Q 014037 328 GFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVA 405 (432)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~li 405 (432)
++.+. .+. ..|..++..++.+.+.. ..+|+.+.+.-.....+..+++.++++++||.+++....+|++++
T Consensus 175 g~f~G---~~~-~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 175 GFFHG---YSW-WVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred Cchhh---cch-HHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 33221 121 23333344444444444 678899999999999999999999999999999999999998753
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.67 E-value=9.7e-15 Score=134.32 Aligned_cols=274 Identities=17% Similarity=0.234 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHh-------hCCchHHHHHHHHHHHHHHHHHHHHhCCCC----------------CCCCCHHHHHHHHHH
Q 014037 139 VIFNILNKKVYN-------YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQ----------------RAPINKELLVILTPV 195 (432)
Q Consensus 139 ~~~~~~nK~~l~-------~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~----------------~~~~~~~~~~~~l~~ 195 (432)
+...+..||.=+ .|..|+..+..-|+--++++.++...+.+. .++++ .+..++.
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~---p~lfl~P 92 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN---PVLFLPP 92 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC---cceecCh
Confidence 444567788655 266788877655554434433333222110 01111 2346678
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc----------c
Q 014037 196 AFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL----------S 265 (432)
Q Consensus 196 ~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~----------~ 265 (432)
++|...+..+.+.||.+++++.+|++|....+|+.+++..+++++++..+|+++..+..|++++...|. +
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s 172 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYS 172 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999998765431 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHHHHHHHHHHHHHHh----cc------hhhhhhhHHHHH
Q 014037 266 FNWTGFISAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLI----EG------PQLMQYGFKAAI 333 (432)
Q Consensus 266 ~~~~G~l~~l~s~l~~Al~~vl~kk~~~~--~~~~~~~~~~~~~~~~~l~p~~~~~----e~------~~~~~~~~~~~~ 333 (432)
.-..|.++.+++-+.-|++.++.+|..++ ++|.+...|..++|.+++..+...+ .+ +.-..++|.+.+
T Consensus 173 ~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~ 252 (372)
T KOG3912|consen 173 SIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAF 252 (372)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHH
Confidence 23679999999999999999999998765 6799999999999976665444432 11 111123455656
Q ss_pred hhhchh-HHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHH
Q 014037 334 AKVGLF-KFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIY 412 (432)
Q Consensus 334 ~~~~~~-~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly 412 (432)
...+.. .+...+...-+.-..+|+......+..|+.|-.+...++.....++++....|.+...|+.|.++.+.|.++|
T Consensus 253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY 332 (372)
T ss_pred HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554432 2222222222333457888888889999999999999999999999999999999999999999999999999
Q ss_pred HHh
Q 014037 413 SLI 415 (432)
Q Consensus 413 ~~~ 415 (432)
+..
T Consensus 333 ~~i 335 (372)
T KOG3912|consen 333 NQI 335 (372)
T ss_pred HHH
Confidence 854
No 30
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.64 E-value=2.3e-13 Score=130.50 Aligned_cols=276 Identities=13% Similarity=0.177 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHHhh--CC-chHHHHHHHHHHHHHHHHHHHHhCC----CC-CCCC------CHHHHHHHHHHHHHHHH
Q 014037 136 FLNVIFNILNKKVYNY--FP-YPYFVSVIHLLVGVVYCLVSWTVGL----PQ-RAPI------NKELLVILTPVAFCHAL 201 (432)
Q Consensus 136 ~~s~~~~~~nK~~l~~--f~-~P~~lt~~r~~~~~l~l~~~~~~~~----~~-~~~~------~~~~~~~~l~~~~~~~~ 201 (432)
+-+.+..+.-|+.-+. .+ .|....++--.+-.+++....+.+. .+ .+.. .++....+...+++|++
T Consensus 25 ~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal 104 (345)
T KOG2234|consen 25 AQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL 104 (345)
T ss_pred HHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence 3445666666666552 12 2555555554555555444333221 11 1111 22233445556889999
Q ss_pred HHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC-----------ccccHHH
Q 014037 202 GHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE-----------LSFNWTG 270 (432)
Q Consensus 202 ~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~-----------~~~~~~G 270 (432)
.+-+.+.++.+++++++++...+..+.|++++.+++++|.++.+|.++++.++|+.++-.+. ..-.+.|
T Consensus 105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G 184 (345)
T KOG2234|consen 105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLG 184 (345)
T ss_pred hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999876211 1123789
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 014037 271 FISAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (432)
Q Consensus 271 ~l~~l~s~l~~Al~~vl~kk~~~~--~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (432)
+...+.+.+..++.+++.+|.+++ .+-+......+.+|.++.+......|+..... ...+..... ..|...+..
T Consensus 185 ~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~---~gff~G~s~-~vw~vVl~~ 260 (345)
T KOG2234|consen 185 LVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINE---YGFFYGYSS-IVWLVVLLN 260 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccccc---CCccccccH-HHHHHHHHH
Confidence 999999999999999999999865 34444444555666666554444445443322 222222222 244444555
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhh
Q 014037 349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANM 419 (432)
Q Consensus 349 g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~ 419 (432)
++.+.+.. ...|+.+-..-.....+..+++.+.|+.+||.++|....+|+.+++..+.+|+..+.+.
T Consensus 261 a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 261 AVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred hccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 55555555 56678888888888889999999999999999999999999999999999999666654
No 31
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.64 E-value=7.1e-13 Score=123.83 Aligned_cols=277 Identities=13% Similarity=0.171 Sum_probs=191.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CCCCC---CCCCHHHHHHHHHHHHHH
Q 014037 124 ALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTV-GLPQR---APINKELLVILTPVAFCH 199 (432)
Q Consensus 124 ~l~~~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~~~~~---~~~~~~~~~~~l~~~~~~ 199 (432)
.+......++| ..+-++-|.+ +..| +..+...|...+..++++.... +..+. ...+++.+..+...+++.
T Consensus 9 il~~l~Ay~lw----G~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li 82 (293)
T COG2962 9 ILLALLAYLLW----GLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI 82 (293)
T ss_pred hHHHHHHHHHH----HHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 33334444455 3445556655 4456 7888889998888776643322 21111 011234455555566777
Q ss_pred HHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHH
Q 014037 200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 279 (432)
Q Consensus 200 ~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l 279 (432)
..+...+.++...-.+=.++.-....|++.++++.+++|||+++.+++++.+..+||........++.|..+.++ +
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la----~ 158 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA----L 158 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH----H
Confidence 777788888888877777888888999999999999999999999999999999999998888888888776665 6
Q ss_pred HHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhh-hhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHH
Q 014037 280 AFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQL-MQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQL 358 (432)
Q Consensus 280 ~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 358 (432)
.|++|..+-|+. ++|+.+-...-...-.+..+....+.+.... .. .+....+..++..|....+=-..
T Consensus 159 sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~---------~~~~~~~~LLv~aG~vTavpL~l 227 (293)
T COG2962 159 SFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQ---------QNANSLWLLLVLAGLVTAVPLLL 227 (293)
T ss_pred HHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhh---------cCCchHHHHHHHhhHHHHHHHHH
Confidence 889999887776 4565554444444444444434444433221 11 01112333445555443332222
Q ss_pred HHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhhHH
Q 014037 359 ATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANMEE 421 (432)
Q Consensus 359 ~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~~~ 421 (432)
-...-++.+=.+.++..+++|.+..+++++++||+++..+.++.+++..|..+|.....+..+
T Consensus 228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r 290 (293)
T COG2962 228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTAR 290 (293)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 225677899899999999999999999999999999999999999999999999976654443
No 32
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.62 E-value=4.4e-15 Score=142.02 Aligned_cols=226 Identities=16% Similarity=0.231 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc--
Q 014037 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-- 264 (432)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~-- 264 (432)
+..+..+..+.+..+.+..+|.||.+++|+..+++.+++-+||..++.++.+||+++.+++++++.++|+++++.++.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 444555666777888999999999999999999999999999999999999999999999999999999999987742
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHhhhcCCC----CchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHh
Q 014037 265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMTGM----DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIA 334 (432)
Q Consensus 265 ------~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~----~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~ 334 (432)
+-...|.++++++++.||.|.++.||...+. |--....|..++.++++.|...+.+............ .
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~-~ 315 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSS-T 315 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCC-c
Confidence 2237899999999999999999999987654 3344555677777777776666543221111100000 0
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 335 KVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 335 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
+... .+...++..-+.=++|. ++.-.++|++.++...+...++++...++-|.++++..++|.+.+++|.+..++
T Consensus 316 q~~~-vv~~~ligtvvSDylW~----~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 316 QFSL-VVFNNLIGTVVSDYLWA----KAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred eeEe-eeHhhHHHHHHHHHHHH----HHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 0000 11111122222223333 455579999999999999999999999999999999999999999999999887
Q ss_pred hhhh
Q 014037 415 IKAN 418 (432)
Q Consensus 415 ~k~~ 418 (432)
..+.
T Consensus 391 ~~~~ 394 (416)
T KOG2765|consen 391 SSEN 394 (416)
T ss_pred cccc
Confidence 6553
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.23 E-value=1.6e-12 Score=118.32 Aligned_cols=262 Identities=10% Similarity=0.093 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 014037 139 VIFNILNKKVYNY-FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSF 217 (432)
Q Consensus 139 ~~~~~~nK~~l~~-f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~ 217 (432)
...++.+.++.++ .+.|...+++.+..-+++--+....+. +.-+..|.+.++.++..+-++.+-..|.+|++...
T Consensus 31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtS 106 (336)
T KOG2766|consen 31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTS 106 (336)
T ss_pred HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHH
Confidence 3445666666664 556888888877766555444443332 22334566777788888777778888999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc-------ccc-HHHHHHHHHHHHHHHHHHHHHh
Q 014037 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-------SFN-WTGFISAMISNIAFTYRSIYSK 289 (432)
Q Consensus 218 ~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~-------~~~-~~G~l~~l~s~l~~Al~~vl~k 289 (432)
.+.+-+-....+++++|++++.|+.+.++.|++++++|+.++...|. +.| ..|..+.++++-+||..|+..+
T Consensus 107 i~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EE 186 (336)
T KOG2766|consen 107 IMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEE 186 (336)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHH
Confidence 99999988888899999999999999999999999999998765441 223 5799999999999999999999
Q ss_pred hhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChh
Q 014037 290 KAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPL 369 (432)
Q Consensus 290 k~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~ 369 (432)
.+.++.|..+++....++|.++...- +..|..+...-.|.. .+...+. ..++-++..-..-.+++..++.
T Consensus 187 flvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~--------~i~~yl~-f~L~MFllYsl~pil~k~~~aT 256 (336)
T KOG2766|consen 187 FLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDS--------AIFLYLR-FALTMFLLYSLAPILIKTNSAT 256 (336)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehH--------HHHHHHH-HHHHHHHHHHhhHHheecCCce
Confidence 99999999999999999999887755 444544332222211 1111111 2222233333333678888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 370 THAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 370 t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
.+++.-.....+++++ -.||-+.+|...+..+.+..|.++|..+.
T Consensus 257 ~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 257 MFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred EEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 8888888888898888 77898999999999999999999996543
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.19 E-value=1.8e-10 Score=96.60 Aligned_cols=120 Identities=18% Similarity=0.310 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccchh
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVS 216 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~al~~v~vs 216 (432)
....+.+|...++++ |...+++|+.++.+ +.+... .+..+....+++.+...+..+++ ..++..+.+.++++++++
T Consensus 4 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 81 (126)
T PF00892_consen 4 AIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS 81 (126)
T ss_pred eeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence 456678999999988 99999999999997 443322 22222244556666666667766 688899999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
.++++..++|+++.+++++++||++++.++.+++++++|+.+..
T Consensus 82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998764
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.17 E-value=1.8e-10 Score=101.24 Aligned_cols=218 Identities=12% Similarity=0.090 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC--cc
Q 014037 188 LLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE--LS 265 (432)
Q Consensus 188 ~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~--~~ 265 (432)
..++..|.+++.++.+..+..+++.++++.++.+.++.-.|+.+++++.+|+|+...++++.++.+.|+++.++.| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 4556677888899999999999999999999999999999999999999999999999999999999999988655 34
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHH----H-HhcchhhhhhhHHHHHhhhchhH
Q 014037 266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPA----V-LIEGPQLMQYGFKAAIAKVGLFK 340 (432)
Q Consensus 266 ~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~----~-~~e~~~~~~~~~~~~~~~~~~~~ 340 (432)
.++.|+.++.+|+...|+|.++.|+...+.+--+...+.+.+|+.-+...+ + .+.+-.. |+. +....
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~----~qs-FA~~P--- 203 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEH----LQS-FAAAP--- 203 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHH----HHH-HhhCC---
Confidence 579999999999999999999999998776666666666666655443221 1 1122111 211 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 341 FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 341 ~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
|.-+...+.....+|+.....+..+.|...++...........+.+++-+-..+.....|..+++.|..+.-.
T Consensus 204 -WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii 276 (290)
T KOG4314|consen 204 -WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII 276 (290)
T ss_pred -chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence 2222333344455666655677788999999999988888889998877777889999999999999887654
No 36
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.15 E-value=2e-10 Score=107.08 Aligned_cols=188 Identities=16% Similarity=0.172 Sum_probs=128.8
Q ss_pred cchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC---------------------------cc
Q 014037 213 VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---------------------------LS 265 (432)
Q Consensus 213 v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~---------------------------~~ 265 (432)
++++.....++..++++++..+.+.+||++..++++.++...|+......+ .+
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 577888899999999999999999999999999999999999987532211 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHH-----HHhcchhhhhhhHHHHHhhhchhH
Q 014037 266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPA-----VLIEGPQLMQYGFKAAIAKVGLFK 340 (432)
Q Consensus 266 ~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~-----~~~e~~~~~~~~~~~~~~~~~~~~ 340 (432)
..+.|..+.+.+.++.++..++.++..++.+. ..|...++..+..+.. ...+.......++ ..+.+.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 153 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDT---MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF-----FIGYPT 153 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC---chHHHHHHHHHHHHHHHHHHHhhcccchhhccCc-----ccCCch
Confidence 33678888888888889999999987665322 2444434333333222 1111111111110 011111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHH
Q 014037 341 -FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIY 412 (432)
Q Consensus 341 -~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly 412 (432)
.+..++..++ ........+++.++.+.++...++++.+.++|+++|||+++..+++|+.+++.|+++|
T Consensus 154 ~~~~~~~~~a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVGLLNVG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2222222222 2223447889999999999999999999999999999999999999999999998765
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.06 E-value=4.8e-08 Score=92.21 Aligned_cols=210 Identities=18% Similarity=0.177 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhH----HHHhHHhhhhhhhc
Q 014037 186 KELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSMAS 260 (432)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~----lsl~~~~~Gv~l~~ 260 (432)
.+.+...+.-|++.++++...+.+++++.+|.+--+ ..++-+.+.+++.++++|.-+..++ ++++++++|+.+.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 366777778899999999999999999999988655 4688888999999999998875544 48888999999998
Q ss_pred cCCccc--------cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHH
Q 014037 261 LTELSF--------NWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAA 332 (432)
Q Consensus 261 ~~~~~~--------~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~ 332 (432)
..|.+. ...|++..+++.+.|..|.++.|-. +.|++....=++ ++.++..............
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~~~------- 191 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAFLPQA-IGMLIGAFIFNLFSKKPFF------- 191 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhHHHHH-HHHHHHHHHHhhccccccc-------
Confidence 765322 2459999999999999999997763 567776665333 3333322222221211111
Q ss_pred HhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchh----hhHHHHHHHHH
Q 014037 333 IAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQ----TGIGTAVAIAG 408 (432)
Q Consensus 333 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~----~~iG~~lii~G 408 (432)
++..+.. ++.|+.+..-|...+...++.+..+.-...-+..+++.+.+++++||+-+.. .++|.++++.|
T Consensus 192 -~k~~~~n-----il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G 265 (269)
T PF06800_consen 192 -EKKSWKN-----ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG 265 (269)
T ss_pred -ccchHHh-----hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence 1111112 4556666666776677777888888878888899999999999999987755 45688888877
Q ss_pred HHH
Q 014037 409 VAI 411 (432)
Q Consensus 409 v~l 411 (432)
..+
T Consensus 266 ~il 268 (269)
T PF06800_consen 266 AIL 268 (269)
T ss_pred hhc
Confidence 653
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.99 E-value=4.8e-09 Score=86.17 Aligned_cols=122 Identities=18% Similarity=0.250 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQR--APINKELLVILTPVAFCHALGHVMSNVSFATVAVS 216 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs 216 (432)
....++.|..+++.+ |.+-++.|-.+...++........+.. ...+++.|..+..-|+...++..+++.+++.-.+|
T Consensus 16 ~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as 94 (140)
T COG2510 16 GLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKAS 94 (140)
T ss_pred HHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcc
Confidence 456688999999887 999999999998887775544332222 22567778888888888999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
...-+-.+.|+++++++++++|||++..+|+|++++++|+++++.
T Consensus 95 ~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 95 RVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred eEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999987653
No 39
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.97 E-value=3e-09 Score=87.38 Aligned_cols=135 Identities=21% Similarity=0.215 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 014037 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (432)
..++++++++++++..++.|-..+++||...+..-++....++.........++... + +.. ..|..++.+|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~-~----~~~----k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGG-E----IGP----KSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceeccc-c----cCc----ceehhhhHHH
Confidence 467899999999999999999999999988888888888877776665544443221 0 111 3455667888
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 350 ~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
+...+.++..|+.++.=.+.......-..+++++++|++++||+++..+++|++++.+|..+.+
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 8877778888899998888888888889999999999999999999999999999999987644
No 40
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.94 E-value=5.1e-09 Score=87.67 Aligned_cols=124 Identities=18% Similarity=0.246 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHH-HHHHHH
Q 014037 279 IAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMF-YHLYNQ 357 (432)
Q Consensus 279 l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~ 357 (432)
++||.+.++.|+..++.|+.....+....+.+ +++.....+..+..... . ..+...+..|+. ....+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLS---------P-RQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCC---------h-hhhhhhhHhhccceehHHH
Confidence 46889999999999999999999999999987 66566555443211111 1 111122333333 344455
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 358 LATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 358 ~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
..+..++++++...++...+.|+++.++++++++|+++..+++|+++++.|+++.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55688999999999999999999999999999999999999999999999998764
No 41
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.92 E-value=6.7e-09 Score=86.29 Aligned_cols=105 Identities=16% Similarity=0.308 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC---CCCCHHHHHHHHHHHHHHH-HHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHH
Q 014037 160 VIHLLVGVVYCLVSWTVGLPQR---APINKELLVILTPVAFCHA-LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQF 235 (432)
Q Consensus 160 ~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~-~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~ 235 (432)
.+|+.++.+++......+.+.+ +..+++.+..++..|++.. .+..+.++|+++.+ +....+.++.|+|+++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4678887776654333322110 1112233445555566654 78899999999999 68889999999999999999
Q ss_pred HccCccChhhHHHHhHHhhhhhhhccCCcc
Q 014037 236 VLGHQIPLSLWLSLAPVVIGVSMASLTELS 265 (432)
Q Consensus 236 ~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~ 265 (432)
++|||++++++.+++++++|+++...+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887754
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.72 E-value=7e-07 Score=87.02 Aligned_cols=139 Identities=13% Similarity=0.134 Sum_probs=105.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHH
Q 014037 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (432)
Q Consensus 267 ~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (432)
...|+++.++++++|+...++.|.. .+++|.++.++...++.+++++........+... ... ..... +...+
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~----~~~--~~~~~-~~~~~ 77 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK----TLI--QTPQK-IFMLA 77 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH----HHH--cCHHH-HHHHH
Confidence 4579999999999999999999875 6799999999999999887776654332211100 000 01111 11122
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 347 ~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
..++....++...++.++++++...++..+..|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 3334444556666789999999999999999999999999999999999999999999999998754
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.72 E-value=6.2e-07 Score=85.40 Aligned_cols=139 Identities=17% Similarity=0.253 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 014037 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (432)
|+++.++++++|+...+..|. ..+++|.++.++-..++.+++.+.............. .........+..+...|
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIER----LKRIQKRPLILSLLLCG 77 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHH----HhCcccchHHHHHHHHH
Confidence 889999999999999999998 4569999999999999988876655443221110000 01011111233344555
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 350 ~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
++....+...+..++++++.+.++..+..|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 5555566666788999999999999999999999999999999999999999999999988653
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.64 E-value=6.7e-07 Score=86.45 Aligned_cols=133 Identities=9% Similarity=0.024 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHH
Q 014037 271 FISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM 350 (432)
Q Consensus 271 ~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 350 (432)
+++.+++++++|.++++.||..++.++. ..+....+.+++.|..........+.. .. ...+..++..++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSR--------LP-ATFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCC--------cc-hhhHHHHHHHHH
Confidence 5778999999999999999887775553 455666677777776654211111110 00 012223344555
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 351 ~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
....+....+..+++.++...++..+..|+++.+++++++||+++..+++|+++++.|+++...
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 5556666667888999999999999999999999999999999999999999999999987653
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.59 E-value=2.8e-06 Score=80.81 Aligned_cols=118 Identities=17% Similarity=0.098 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccchh
Q 014037 139 VIFNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVS 216 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~al~~v~vs 216 (432)
....+..|+..++.+ .+.....+++.++.+++.+......+. ...+.+.+...+..+++ ..++..+.++++++++++
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 219 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPS 219 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 566778899887655 234555578888887766554433222 23355556555556655 567888999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhh
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVS 257 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~ 257 (432)
.++++..++|++++++++++++|+++..++.|.++++.|+.
T Consensus 220 ~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 220 AASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999863
No 46
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.42 E-value=1.9e-06 Score=83.86 Aligned_cols=64 Identities=22% Similarity=0.383 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 197 ~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
+++.++..++..|+.+.|.+..+-+.+..-++.++++.+++|||+++..+.|.++++.|..++.
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 4567788899999999999999999999999999999999999999999999999999998653
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.41 E-value=7.8e-06 Score=81.60 Aligned_cols=135 Identities=15% Similarity=0.237 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC-CCCchhHHHHHHHHHHHHHHHHHHHhcchhhhh-hhHHHHHhhhchhHHHHHHHH
Q 014037 270 GFISAMISNIAFTYRSIYSKKAMT-GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQ-YGFKAAIAKVGLFKFLSDLFW 347 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl~kk~~~-~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 347 (432)
-++..++..++|+..+++.|..++ ++++....+|-..++.++++|+....+...... ..+ ..+..+..
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~----------~~~~~l~l 83 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSV----------SILSKIGL 83 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchH----------HHHHHHHH
Confidence 455566778899999999998876 589999999999999999988876654321111 011 11233344
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHh------hCcccchhhhHHHHHHHHHHHHHHH
Q 014037 348 IGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVV------FGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 348 ~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~------fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
.|+++..++...+..+++++|...++..+..|+++.++++++ ++|+++..+++|+++.++|+.+...
T Consensus 84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 555555566667789999999999999999999999999999 6999999999999999999987654
No 48
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.37 E-value=2.1e-05 Score=76.50 Aligned_cols=120 Identities=18% Similarity=0.249 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccchhH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVSF 217 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~al~~v~vs~ 217 (432)
....+..|+..++.+ |...+ +..+++.+++.+....... ....+...+...+..+++ ..++..++++++++++++.
T Consensus 161 a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~ 237 (293)
T PRK10532 161 AIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRT 237 (293)
T ss_pred HHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhH
Confidence 456677788776655 66654 4555555554443332222 122344444444445544 5667789999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 218 ~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
++++..++|++.++++++++||+++..+++|.+++++|++....
T Consensus 238 as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 238 FGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987753
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.31 E-value=1.9e-05 Score=76.89 Aligned_cols=119 Identities=14% Similarity=0.180 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFT 218 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~ 218 (432)
...++++|+..++.+ |.... . ..+.+.+.+............+.+.+..++..++...++..+.++++++++++.+
T Consensus 169 A~~~v~~k~~~~~~~-~~~~~--~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~ 244 (295)
T PRK11689 169 AAYCNVTRKYARGKN-GITLF--F-ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLL 244 (295)
T ss_pred HHHHHHHhhccCCCC-chhHH--H-HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 566677888765554 54432 2 2233333322222211122345555656666666667788999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 219 ~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
+.+..++|++.++++++++||+++..+++|.+++++|+.+...
T Consensus 245 s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 245 ATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999987654
No 50
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.31 E-value=1.7e-05 Score=67.25 Aligned_cols=120 Identities=16% Similarity=0.061 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 014037 269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (432)
Q Consensus 269 ~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (432)
.|+++.+.+.++.+..+++.|+.+++....+.... . ...+ . ...++. ..++..++..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~~~~----~-~~~~p~----------------~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-IAAL----L-AFGLAL----------------RAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-HHHH----H-HHhccH----------------HHHHHHHHHH
Confidence 47889999999999999999998876543332111 0 0000 0 000000 0122233333
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHH--hhCcccchhhhHHHHHHHHHHHHHHHh
Q 014037 349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIV--VFGNKISTQTGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 349 g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l--~fge~~s~~~~iG~~lii~Gv~ly~~~ 415 (432)
++.+.+++ ..+++.+.......-.+..+.+.+.++. +|||++|+.+++|++++++|+++.+..
T Consensus 59 ~la~~~w~----~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 59 ALSMLCWL----KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHH----HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 44444444 6778888888877777777777777774 899999999999999999999997753
No 51
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.26 E-value=3.4e-05 Score=63.70 Aligned_cols=65 Identities=15% Similarity=0.236 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 197 ~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
+++.+...+...+++++|++.+..+-++.++++++++++++||++++.+++++.++++|+++...
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 55777888999999999999999999999999999999999999999999999999999987653
No 52
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.25 E-value=3.7e-05 Score=74.77 Aligned_cols=123 Identities=13% Similarity=0.122 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccchh
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTV-GLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVS 216 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~al~~v~vs 216 (432)
....+.+|+.-.. ++...+++++.++.+.+.+.... +.......+.+.+..++..+++ ..++..+.++++++++++
T Consensus 163 a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~ 240 (292)
T PRK11272 163 AFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240 (292)
T ss_pred HHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 3444566665332 35667788888888766554332 2211111244555555555654 567788999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE 263 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~ 263 (432)
.+.++..++|++.++++++++||+++..+++|.+++++|+.+....+
T Consensus 241 ~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876543
No 53
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.12 E-value=0.00012 Score=69.11 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=105.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHH
Q 014037 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (432)
Q Consensus 267 ~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (432)
+..|+++++.+-+.|++--.+.|-+ +..++.++..+-.+.+.++++........++... +....+..+..+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~-------~~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELK-------QLLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHhCcHHHHHHH
Confidence 3469999999999999999888876 6688999999999999988876666553332221 1112223333333
Q ss_pred HHHHHHHHHHHHHH-HHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 347 WIGMFYHLYNQLAT-NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 347 ~~g~~~~~~~~~~~-~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
..++.-. .|...| +..+.-..+..|..-+++|.+.+++|.++++|+++..|++..+++.+|+..-....
T Consensus 77 l~a~li~-~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 77 LTALLIG-LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHH-HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 4443322 333333 67777788999999999999999999999999999999999999999998765443
No 54
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.06 E-value=0.0014 Score=64.68 Aligned_cols=225 Identities=14% Similarity=0.081 Sum_probs=139.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCcc---C----hhhHHHHhHHhhhh
Q 014037 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQI---P----LSLWLSLAPVVIGV 256 (432)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~---~----~~~~lsl~~~~~Gv 256 (432)
+.+.+...+..|++...++.....+++++.+|...-+ ..++-++..++..++++|-. + ....++++++++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 4566677777899999999999999999999998665 56888999999999998744 2 35678888999999
Q ss_pred hhhcc----CCc--------ccc-HHHHHHHHHHHHHHHHHHH-------HHhhh-cCCCCchhHHHHHHH---HHHHHH
Q 014037 257 SMASL----TEL--------SFN-WTGFISAMISNIAFTYRSI-------YSKKA-MTGMDSTNVYAYTSI---IALLFC 312 (432)
Q Consensus 257 ~l~~~----~~~--------~~~-~~G~l~~l~s~l~~Al~~v-------l~kk~-~~~~~~~~~~~~~~~---~~~~~l 312 (432)
++... .|. +++ ..|++.++++.+.++.++. ..+.. ..+.++.....-+.. .+.++.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~ 228 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAIT 228 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Confidence 98876 332 122 5799999999999999984 33321 123444433222222 333333
Q ss_pred HHHHHHh---cchhhhhhhHHHHHhhhc----hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhH----HHHHHHHHHHH
Q 014037 313 IPPAVLI---EGPQLMQYGFKAAIAKVG----LFKFLSDLFWIGMFYHLYNQLATNTLERVAPLT----HAVGNVLKRVF 381 (432)
Q Consensus 313 ~p~~~~~---e~~~~~~~~~~~~~~~~~----~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t----~sv~~~lk~v~ 381 (432)
-...... ..... .+..+... +..-.....+.|+..+..+......-++.+... ..+..-+..++
T Consensus 229 n~~~~~~~~~k~~~~-----~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vii 303 (345)
T PRK13499 229 NLGFCFIRLAKNKDL-----SLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLC 303 (345)
T ss_pred HHHHHHHHHhhCCCc-----ccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHH
Confidence 2221111 11110 00001111 001111223445555555555445445553322 22444566688
Q ss_pred HHHHHHHhhCcccc------hhhhHHHHHHHHHHHHHHHh
Q 014037 382 VIGFSIVVFGNKIS------TQTGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 382 ~ills~l~fge~~s------~~~~iG~~lii~Gv~ly~~~ 415 (432)
+.+.++ ++||.-+ ...++|+++++.|..+..+.
T Consensus 304 stlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 304 GNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 888888 4999766 66788999999999876553
No 55
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.04 E-value=0.00016 Score=72.11 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=99.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-chhHHHHHHHHHHHHHHHHHHHhc--chhhhhhhHHHHHhhhchhHHHH
Q 014037 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIE--GPQLMQYGFKAAIAKVGLFKFLS 343 (432)
Q Consensus 267 ~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~ 343 (432)
++.-..+++..-.+....+++.|..++..+ |+.+..+...++.+++.......- .++.. . ....+.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~---------~~~~~~ 115 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--S---------LKLFLK 115 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--C---------HHHHHH
Confidence 344445555555556677889999999898 999999999998776654433211 11110 0 011233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 344 DLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 344 ~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
.++..|+++.......+..++++++...++.....|++++++++++++|+++..+++|.+++++|+.+..
T Consensus 116 ~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 116 NFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 4456666665555555678889999999999999999999999999999999999999999999998765
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.02 E-value=0.00028 Score=68.78 Aligned_cols=124 Identities=16% Similarity=0.198 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHHH-HHhCCCC-----CCCCCHHHHHHHHHHHHH-HHHHHHHHHHH
Q 014037 139 VIFNILNKKVYNYFPYP--YFVSVIHLLVGVVYCLVS-WTVGLPQ-----RAPINKELLVILTPVAFC-HALGHVMSNVS 209 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P--~~lt~~r~~~~~l~l~~~-~~~~~~~-----~~~~~~~~~~~~l~~~~~-~~~~~~l~~~a 209 (432)
....++.|+..++.+.| .....++.+++.+.+... .....+. ....+.+.+..++-.+++ ..++..+.+.+
T Consensus 156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~ 235 (299)
T PRK11453 156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTL 235 (299)
T ss_pred HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667778776555423 333445555554433222 2222211 113345556655555544 55677889999
Q ss_pred hhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC
Q 014037 210 FATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (432)
Q Consensus 210 l~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~ 262 (432)
+++.++..+..+..++|++..+++++++||+++..+++|.+++++|+.+...+
T Consensus 236 l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 236 LGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999876543
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.95 E-value=0.00046 Score=59.96 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHHHh-CCCCCCC-----------CCHHHHHHHHHH
Q 014037 134 WYFLNVIFNILNKKVYNY------FPYPYFVSVIHLLVGVVYCLVSWTV-GLPQRAP-----------INKELLVILTPV 195 (432)
Q Consensus 134 w~~~s~~~~~~nK~~l~~------f~~P~~lt~~r~~~~~l~l~~~~~~-~~~~~~~-----------~~~~~~~~~l~~ 195 (432)
-.++.....++.|+.+++ -..|+.+.......+.+++.+.+.. +.++..+ .+.+.+..++..
T Consensus 8 s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
T PF03151_consen 8 SSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILS 87 (153)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHH
Confidence 334445666777887775 2247777777777777766654432 2222100 023455566667
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 196 AFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 196 ~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
+++..+.+...+..++++++-+++++....-+++.++++++++|+++..++.|+++.++|+.+.+
T Consensus 88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 78888888999999999999999999999999999999999999999999999999999987643
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.88 E-value=0.00038 Score=67.90 Aligned_cols=124 Identities=16% Similarity=0.181 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhhhcCC-CCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHH
Q 014037 279 IAFTYRSIYSKKAMTG-MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQ 357 (432)
Q Consensus 279 l~~Al~~vl~kk~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 357 (432)
++....+++.|..+++ ..|..+..+....+.+.+.+.... ......+... .-+..++..|++...+..
T Consensus 12 ~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 12 FLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKRLKISS----------ALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCH----------HHHHHHHHHHHHHHHHHH
Confidence 3444556778888887 457888888877776665443211 1010000001 112233455666555566
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 358 LATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 358 ~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
..+..++++++...++.....|+++.++++++++|+++..+++|.+++++|+.+..
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 66788999999999999999999999999999999999999999999999997643
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.78 E-value=0.00072 Score=55.91 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 354 LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 354 ~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
..+...+..++..++ ..++...+.|+++.+++.++|+|+++..+++|++++++|+.+....+
T Consensus 47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 334444467778885 77788889999999999999999999999999999999999877654
No 60
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.70 E-value=7.3e-06 Score=75.14 Aligned_cols=219 Identities=13% Similarity=0.151 Sum_probs=147.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhh----HHHHhHHhhh
Q 014037 181 RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSL----WLSLAPVVIG 255 (432)
Q Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~----~lsl~~~~~G 255 (432)
.+..+.+.+..-+.-|++...+....+-++++..+|-+.-+ ..++-+-+.+++.+.++|..+..+ ..++++++.|
T Consensus 51 ~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG 130 (288)
T COG4975 51 SPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIG 130 (288)
T ss_pred cCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHh
Confidence 34566776777777889999999999999999999988665 457788888999999999887544 3678888899
Q ss_pred hhhhccCCcc--------ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHH-HHHHHHhcchhhhh
Q 014037 256 VSMASLTELS--------FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFC-IPPAVLIEGPQLMQ 326 (432)
Q Consensus 256 v~l~~~~~~~--------~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l-~p~~~~~e~~~~~~ 326 (432)
+.+.++.|.+ ..-.|+...+.|.+.|..|-++.+... .|.++...-+++ +.++. +.+...-+.....+
T Consensus 131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g~saiLPqAi-GMv~~ali~~~~~~~~~~~K 207 (288)
T COG4975 131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDGLSAILPQAI-GMVIGALILGFFKMEKRFNK 207 (288)
T ss_pred heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccchhhhhHHHH-HHHHHHHHHhhcccccchHH
Confidence 9998876631 113688888899999999988887663 444444332222 22221 11222222121211
Q ss_pred hhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhh----hHHH
Q 014037 327 YGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQT----GIGT 402 (432)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~----~iG~ 402 (432)
+ .+ .-...|+.....|...+...++.+-.|.=...-+.-+++.+-++++++|+-|..+ ++|+
T Consensus 208 ~-------------t~-~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi 273 (288)
T COG4975 208 Y-------------TW-LNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI 273 (288)
T ss_pred H-------------HH-HHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence 1 11 1244566666666666666666665554444556677888999999999887665 4588
Q ss_pred HHHHHHHHHHHHhh
Q 014037 403 AVAIAGVAIYSLIK 416 (432)
Q Consensus 403 ~lii~Gv~ly~~~k 416 (432)
++++.|..+....|
T Consensus 274 ilivvgai~lg~~K 287 (288)
T COG4975 274 ILIVVGAILLGIAK 287 (288)
T ss_pred HHHHHHhhhhheec
Confidence 88888877665443
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.70 E-value=0.0004 Score=67.49 Aligned_cols=132 Identities=14% Similarity=0.112 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 014037 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (432)
|++++++++++|+...+..|+.. +.++.+.. ...++.+++.........+.. .....+...+..|
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~------------~~~~~~~~g~l~G 66 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEF------------WALSIFLVGLLSG 66 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc------------cccHHHHHHHHHH
Confidence 67899999999999999999986 55554443 234444444333333221111 0012344445666
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHH-HHHHHHHHHHHHhhCcccchhh----hHHHHHHHHHHHHHHHhh
Q 014037 350 MFYHLYNQLATNTLERVAPLTHAVGNV-LKRVFVIGFSIVVFGNKISTQT----GIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 350 ~~~~~~~~~~~~~l~~~sa~t~sv~~~-lk~v~~ills~l~fge~~s~~~----~iG~~lii~Gv~ly~~~k 416 (432)
+.....|...+..+++++........+ +..+++.+++.++|||+.+..+ ++|.++++.|+++....+
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 777667777778888888777755555 8888999999999999999999 999999999999876554
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.69 E-value=0.0021 Score=54.47 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHH--HccCccChhhHHHHhHHhhhhhhhccCC
Q 014037 192 LTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQF--VLGHQIPLSLWLSLAPVVIGVSMASLTE 263 (432)
Q Consensus 192 ~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~--~l~e~~~~~~~lsl~~~~~Gv~l~~~~~ 263 (432)
+...-+++.+...+.++++++.|++.+..+-+..+.++.+.++. ++||++++.+++|++++++|+.+...++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 33344667888889999999999999999999999888888885 8999999999999999999999887543
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.69 E-value=0.0026 Score=60.85 Aligned_cols=119 Identities=24% Similarity=0.358 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHhhccchhH
Q 014037 140 IFNILNKKVYNYFPYPYFVSV-IHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHA-LGHVMSNVSFATVAVSF 217 (432)
Q Consensus 140 ~~~~~nK~~l~~f~~P~~lt~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~l~~~al~~v~vs~ 217 (432)
...+.+|... +.+ +..... +++............ .... .+.+.+.+......+++.. .+..+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 5566777766 333 555555 454422222222222 2111 3345566666777777766 58899999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC
Q 014037 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (432)
Q Consensus 218 ~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~ 262 (432)
...+..++|++.+++++++++|+++..+++|.++++.|+.+....
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999887654
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.61 E-value=0.0025 Score=52.55 Aligned_cols=53 Identities=21% Similarity=0.175 Sum_probs=47.0
Q ss_pred HHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 361 ~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
..+++.+.......-.+.++.+.++|+++|||++++.+++|++++++|+.+..
T Consensus 56 ~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 56 LVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 57778888887666669999999999999999999999999999999998754
No 65
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.54 E-value=0.00028 Score=67.52 Aligned_cols=66 Identities=18% Similarity=0.274 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 196 AFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 196 ~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
-+.+.+|-..++.|+.+.|.+..+-+.+++-++.++++.++++|++++...+|.+++++|-.+...
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 355778889999999999999999999999999999999999999999999999999999876543
No 66
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.46 E-value=0.0018 Score=53.99 Aligned_cols=70 Identities=11% Similarity=0.198 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC
Q 014037 193 TPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (432)
Q Consensus 193 l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~ 262 (432)
....+++.+...+...+++++|++.+..+ ....-+.+++.+.++++|++++.+++++.++++|++++...
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 44557777888899999999999998777 56899999999999999999999999999999999887653
No 67
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.32 E-value=0.0034 Score=51.61 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCC
Q 014037 195 VAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE 263 (432)
Q Consensus 195 ~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~ 263 (432)
.-+++.+...+...+++++|++.+..+ ....-+.+++.++++++|++++.+++++.++++|+++....+
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 456677777788999999999998877 457889999999999999999999999999999999876543
No 68
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.28 E-value=0.0053 Score=50.30 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 193 TPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 193 l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
+...+++.....+...+++++|++.+..+ ....-+.+.+.+++++||++++.+++++.++++|++...
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 33456666777888899999999998666 557888999999999999999999999999999998753
No 69
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.28 E-value=0.0058 Score=56.72 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccchhH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVSF 217 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~al~~v~vs~ 217 (432)
..+.+..|.+-+.-|-+ .-+..-+++++++.+++-.... ...-+++......+.++++ .++-..+...++.++|..+
T Consensus 161 a~YIv~G~r~g~~~~g~-~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~ 238 (292)
T COG5006 161 ALYIVLGQRAGRAEHGT-AGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPART 238 (292)
T ss_pred HHHHHHcchhcccCCCc-hHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhH
Confidence 56667777777544423 3344666677766665433211 1223455555555556665 4456788999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhh
Q 014037 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVS 257 (432)
Q Consensus 218 ~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~ 257 (432)
+.++.+++|.+.++.++++++|+++..+|+++..++.+.+
T Consensus 239 F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 239 FGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999888765
No 70
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.27 E-value=0.0044 Score=50.46 Aligned_cols=68 Identities=16% Similarity=0.160 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 194 PVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 194 ~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
...+++.....+...+++++|++.+..+ .....+.+.+.+++++||++++.+++++.++++|++....
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3456677777888899999999998666 5588899999999999999999999999999999987754
No 71
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.20 E-value=0.002 Score=53.79 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=46.4
Q ss_pred HHhhccChhH-HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 361 NTLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 361 ~~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
..+++.+-.. +++...+..+.+.++++++|||++|+.+++|++++++|+...+...
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 4555655444 4777778899999999999999999999999999999999887644
No 72
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.16 E-value=0.0096 Score=58.69 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 347 ~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
..+++-...|+....+.++++.....+......++++++|+++++++.++.+++|++++++|+.+.....
T Consensus 84 lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 84 LLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 3467777788888899999999999999999999999999999999999999999999999998766554
No 73
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.14 E-value=0.014 Score=57.03 Aligned_cols=133 Identities=16% Similarity=0.310 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHh---CCCC-CC---CCCHHHHHHHHHHHHHHH
Q 014037 129 FFFFMWYFLNVIFNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTV---GLPQ-RA---PINKELLVILTPVAFCHA 200 (432)
Q Consensus 129 ~~~~~w~~~s~~~~~~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~---~~~~-~~---~~~~~~~~~~l~~~~~~~ 200 (432)
+++++..++......++|+++++.+ .++...+...+.+.++..+.... +... .. ...++.+..++..+++.+
T Consensus 157 ~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~ 236 (303)
T PF08449_consen 157 ILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGA 236 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4455566666777788899987654 47777777777777765544332 1111 00 012234566667777778
Q ss_pred HHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 201 ~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
.+..+.+.-.+..++-+.+++..+--+++.+++.+++++++++.+|.|+++++.|..+-..
T Consensus 237 ~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 237 LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 8887777888889999999999999999999999999999999999999999999987654
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.11 E-value=0.0031 Score=51.00 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC
Q 014037 194 PVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (432)
Q Consensus 194 ~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~ 262 (432)
..-+++.....+...+++++|++.+..+ ...-.+.+++.+++++||+.+..+++++.++++|++.....
T Consensus 35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 3445666677788899999999997655 66788999999999999999999999999999999877543
No 75
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.99 E-value=0.028 Score=48.26 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQ-RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSF 217 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~ 217 (432)
.....+|-.+-++...|+.-+++.+..+.+.+.+.+....++ .......+|+. ...|++-+....+..+...++.++.
T Consensus 14 ~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~~~~vp~lG~~~ 92 (138)
T PF04657_consen 14 ALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSNIILVPRLGAAL 92 (138)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHHHHHhhhhhHHH
Confidence 344456666666666699999999999998877655544332 12222223443 4478888888899999999999888
Q ss_pred HHHH-hhhhHHHHHHHHHH----HccCccChhhHHHHhHHhhhhhh
Q 014037 218 THTI-KALEPFFNAAASQF----VLGHQIPLSLWLSLAPVVIGVSM 258 (432)
Q Consensus 218 ~~ii-~s~~Pvft~ils~~----~l~e~~~~~~~lsl~~~~~Gv~l 258 (432)
+..+ -..+-+..+++..+ .-++++++.++++++++++|+.+
T Consensus 93 ~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 93 TTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7665 56778888888886 35678899999999999999864
No 76
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.97 E-value=0.012 Score=47.57 Aligned_cols=55 Identities=22% Similarity=0.174 Sum_probs=47.6
Q ss_pred HHhhccChhH-HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHh
Q 014037 361 NTLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 361 ~~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~ 415 (432)
..+++++-.+ +++..-+..+.+.+.++++|||++++.+++|..++++|+...+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4566666554 589999999999999999999999999999999999999987653
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.92 E-value=0.007 Score=49.77 Aligned_cols=56 Identities=23% Similarity=0.276 Sum_probs=46.9
Q ss_pred HHhhccChhH-HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 361 NTLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 361 ~~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
..+++.+-.. +++...+..+.+.++++++|||++++.+++|++++++|+...+...
T Consensus 49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4566666544 4777778899999999999999999999999999999999986543
No 78
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.91 E-value=0.028 Score=55.55 Aligned_cols=141 Identities=16% Similarity=0.115 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHH--HHHHHHHH-hcchhhhhhhHHHHHhhhchhHHHHH
Q 014037 268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALL--FCIPPAVL-IEGPQLMQYGFKAAIAKVGLFKFLSD 344 (432)
Q Consensus 268 ~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~--~l~p~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~ 344 (432)
..|+++++++++|++...+=.|| .++-+ +|.. |. ..+.+ ++.|.... ...+. +.+.+.+.+. ..+..
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~-W~-v~gi~~wl~~~~~~g~~~~~~-----f~~~~~~~~~-~~~~~ 75 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETM-WS-VGGIFSWLILPWLIAALLLPD-----FWAYYSSFSG-STLLP 75 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCCCc-hhHH-HH-HHHHHHHHHHHHHHHHHHhhh-----HHHHHHhcCH-HHHHH
Confidence 46999999999999999888888 34333 3333 33 22221 11221111 11111 1122222222 34445
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhH-HHHHHHHHHHHHHHHHHHhhCccc---c----hhhhHHHHHHHHHHHHHHHhh
Q 014037 345 LFWIGMFYHLYNQLATNTLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKI---S----TQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 345 l~~~g~~~~~~~~~~~~~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~---s----~~~~iG~~lii~Gv~ly~~~k 416 (432)
.++.|++...-|...+..+++.+-.. ..+..-+..+...+++.+++||=. + ...++|.+++++|+.+..+.-
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 56677777777777777777776444 466777888999999999998622 2 346779999999999988744
Q ss_pred hh
Q 014037 417 AN 418 (432)
Q Consensus 417 ~~ 418 (432)
.+
T Consensus 156 ~~ 157 (345)
T PRK13499 156 QL 157 (345)
T ss_pred hh
Confidence 33
No 79
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.90 E-value=0.03 Score=45.87 Aligned_cols=53 Identities=13% Similarity=0.253 Sum_probs=45.5
Q ss_pred HHhhccChhH-HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 361 NTLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 361 ~~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
..+++.+-.+ +++...+..+.+.+.++++|||++++.+++|+++++.|+...+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4556666544 5888889999999999999999999999999999999998754
No 80
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.76 E-value=0.0049 Score=58.28 Aligned_cols=76 Identities=22% Similarity=0.308 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhhhh
Q 014037 344 DLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKANM 419 (432)
Q Consensus 344 ~l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~~~ 419 (432)
.+...++++.+.|...+..+++.+|.++.+....|.+.+.++++++++++++..||++..+.++|+.+.+......
T Consensus 19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3456678888899999999999999999999999999999999999999999999999999999999987665443
No 81
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.71 E-value=0.049 Score=46.74 Aligned_cols=130 Identities=12% Similarity=0.194 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCC-chhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 014037 271 FISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (432)
Q Consensus 271 ~l~~l~s~l~~Al~~vl~kk~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (432)
+++++++.++-+++..+.-++.+... |+...+.....+++.+.......+.++... ..+..+ |. ...|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~------~~~~p~---w~--~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS------LSSVPW---WA--YLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch------hccCCh---HH--hccH
Confidence 56778888999999999888888765 999999999999999887777765542211 112222 21 2356
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHH-HHHHHHHHHHH-hhC---cccchhhhHHHHHHHHHHHH
Q 014037 350 MFYHLYNQLATNTLERVAPLTHAVGNVL-KRVFVIGFSIV-VFG---NKISTQTGIGTAVAIAGVAI 411 (432)
Q Consensus 350 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l-k~v~~ills~l-~fg---e~~s~~~~iG~~lii~Gv~l 411 (432)
+++..+-......+.+.++......... +-+.+.+++.+ +|| +++++.+++|.+++++|+.+
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 6666666666678889999888665554 44555666665 343 57999999999999999863
No 82
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.57 E-value=0.022 Score=46.38 Aligned_cols=54 Identities=22% Similarity=0.145 Sum_probs=46.3
Q ss_pred HHhhccChhH-HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 361 NTLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 361 ~~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
..+++.+-.. +++..-+..+.+.+.++++|||++++.+++|+.+++.|+...+.
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 4555665544 58889999999999999999999999999999999999998653
No 83
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.39 E-value=0.025 Score=44.97 Aligned_cols=58 Identities=16% Similarity=0.299 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHH
Q 014037 195 VAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPV 252 (432)
Q Consensus 195 ~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~ 252 (432)
...++.....+...+++++|++.+..+ .....+.+.+.+.+++||+++..++.++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 344677788899999999999998655 5689999999999999999999999998764
No 84
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.27 E-value=0.12 Score=49.13 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhH----HHHhHHhhhhh
Q 014037 184 INKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVS 257 (432)
Q Consensus 184 ~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~----lsl~~~~~Gv~ 257 (432)
.+++.++. +..|+++..++.+...+.+.+.++.+-.+..+..+...+.+.+++||+=+++++ ++++++++|.+
T Consensus 191 ~~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 191 FEKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred cccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 34444554 457999999999999999999999999999999999999999999998886655 45555555554
No 85
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.78 E-value=0.026 Score=46.40 Aligned_cols=69 Identities=20% Similarity=0.343 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhh
Q 014037 190 VILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (432)
Q Consensus 190 ~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~ 259 (432)
+..+| -+++-.+...+++.+...+.|.+.-+ ++++-+||++.++++.+|..+++.++|+.+++.|+.+.
T Consensus 43 ~y~ip-f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIP-FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 34443 35566678889999999999998777 69999999999988877888899999999999999764
No 86
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.69 E-value=0.1 Score=48.42 Aligned_cols=66 Identities=14% Similarity=0.101 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhh
Q 014037 193 TPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM 258 (432)
Q Consensus 193 l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l 258 (432)
....++.+.+..+..+.+++.+..+..++..+.++++.+++.++++|+++..++.|..+++.|+.+
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344566777778889999999999999999999999999999999999999999999999998754
No 87
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.55 E-value=0.48 Score=40.97 Aligned_cols=120 Identities=17% Similarity=0.160 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HH-HHHHHHHHHHHHHHHHHHHHHHhhccch
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPIN--KE-LLVILTPVAFCHALGHVMSNVSFATVAV 215 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~--~~-~~~~~l~~~~~~~~~~~l~~~al~~v~v 215 (432)
...+-.|-.+-.....|..-++..+.+|.+.+.+..... .+.++.. ++ .|+. ...|++-+.....+......+.+
T Consensus 18 ~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~-~~GG~lGa~~vt~s~~l~p~lGa 95 (150)
T COG3238 18 PLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWA-WIGGLLGAIFVTSSILLAPRLGA 95 (150)
T ss_pred hhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHH-HHccchhhhhhhhhHHhccchhH
Confidence 344456666666666799999999999998777655543 2222222 22 3443 34567766666777777888877
Q ss_pred hHHHHH-hhhhHHHHHHHHHHHc----cCccChhhHHHHhHHhhhhhhhc
Q 014037 216 SFTHTI-KALEPFFNAAASQFVL----GHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 216 s~~~ii-~s~~Pvft~ils~~~l----~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
+.++++ -+.+-+..+++..+=. +++++..++++++++++|+.+..
T Consensus 96 ~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 96 ATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 776544 6777888788777643 36788999999999999965543
No 88
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.49 E-value=0.42 Score=41.35 Aligned_cols=137 Identities=9% Similarity=0.112 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCC-chhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHH
Q 014037 268 WTGFISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (432)
Q Consensus 268 ~~G~l~~l~s~l~~Al~~vl~kk~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (432)
+..++.++++.++-.++.-+.-++.+..+ |.--.......|++.++......++..... ......| |. +
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~~~~~pw---W~--~ 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-----AVASAPW---WA--W 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----hccCCch---HH--H
Confidence 45677888899999999988888877665 666666677777777776666654432221 1122222 21 2
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHH-HHHHHHHHHHHHHHh-hC---cccchhhhHHHHHHHHHHHHHHH
Q 014037 347 WIGMFYHLYNQLATNTLERVAPLTHAVG-NVLKRVFVIGFSIVV-FG---NKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 347 ~~g~~~~~~~~~~~~~l~~~sa~t~sv~-~~lk~v~~ills~l~-fg---e~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
..|+++..+-........+.++.+.... -.-+-+.+.+++.+= || .+++...++|++++++|+++.+.
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3345555555555667778888776444 344555566666553 33 36999999999999999666543
No 89
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.47 E-value=0.09 Score=51.27 Aligned_cols=117 Identities=18% Similarity=0.192 Sum_probs=77.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHH
Q 014037 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (432)
Q Consensus 267 ~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (432)
...|++++++++++.+...+++||...+.+....-.-. ++..... .+.+|..++
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~---------------~~~~~l~-----------~~~W~~G~~ 58 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS---------------GGRSYLR-----------RPLWWIGLL 58 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc---------------hhhHHHh-----------hHHHHHHHH
Confidence 46799999999999999999999876543220000000 0000000 011222222
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 347 ~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
.. ..+...++ ..+...++...+..+.+..++..+++..++||+++...++|+++++.|..+.-
T Consensus 59 ~~-~~g~~~~~---~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LM-VLGEILNF---VALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HH-hcchHHHH---HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 22 22233343 34446777778888999999999999999999999999999999999997644
No 90
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.34 E-value=0.025 Score=53.44 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 014037 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (432)
|++++++|.++++...+=.||.-. .|++-.+.+.+....+.-....+..+.+.... ...+.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p-----------------~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT-GDGFFFQWVMCSGIFLVGLVVNLILGFPPFYP-----------------WAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC-CCcHHHHHHHHHHHHHHHHHHHHhcCCCccee-----------------HHHhhh
Confidence 678889999999998888888754 46766666666555554443433333332211 123344
Q ss_pred HHHHHHHHHHHHHhhccCh-hHHHHHHHHHHHHHHHHHHH-hhCcc-----cchhhhHHHHHHHHHHHHHHHhhhhh
Q 014037 350 MFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSIV-VFGNK-----ISTQTGIGTAVAIAGVAIYSLIKANM 419 (432)
Q Consensus 350 ~~~~~~~~~~~~~l~~~sa-~t~sv~~~lk~v~~ills~l-~fge~-----~s~~~~iG~~lii~Gv~ly~~~k~~~ 419 (432)
.+....|....-.++.++= +-..+.+..+-+.....|-+ +||++ -.+.+++|++++++|..+|...|...
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 4444445444444555442 22345566666666666644 67653 45779999999999999998876554
No 91
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.14 E-value=0.56 Score=44.99 Aligned_cols=132 Identities=12% Similarity=0.149 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCC-----CCCCHHHHHHHHHHHHHHHH
Q 014037 128 GFFFFMWYFLNVIFNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTVGLPQR-----APINKELLVILTPVAFCHAL 201 (432)
Q Consensus 128 ~~~~~~w~~~s~~~~~~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~ 201 (432)
.++++.+.++-...+-..+.++.++. .++.+.+.-.++.+++..........-. -...++.++.++..+.+.+.
T Consensus 174 ~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gav 253 (327)
T KOG1581|consen 174 ILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAV 253 (327)
T ss_pred HHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhh
Confidence 35556666665566677778877544 2444444444444443333222111101 12345778889999999999
Q ss_pred HHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhh
Q 014037 202 GHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (432)
Q Consensus 202 ~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~ 259 (432)
+..+.++-+..-..=+.++|..+-=++.++++.++++.++++.+|.+++++++|..+-
T Consensus 254 GQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 254 GQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred hhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 9999888887766666667777778889999999999999999999999999998754
No 92
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.86 E-value=1.5 Score=43.03 Aligned_cols=116 Identities=22% Similarity=0.256 Sum_probs=81.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhcch---hhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH
Q 014037 295 MDSTNVYAYTSIIALLFCIPPAVLIEGP---QLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH 371 (432)
Q Consensus 295 ~~~~~~~~~~~~~~~~~l~p~~~~~e~~---~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~t~ 371 (432)
..|.+..+..-+.-.+++....+.-+.. +... +..+.+.... .. ..-+..-++.+.+.|...|..+...+|.++
T Consensus 45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~-~l~~~i~~~~-~~-~lk~~vPa~iYalqNnl~yval~~ldaaty 121 (345)
T KOG2234|consen 45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLK-SLSKEILAAP-RE-TLKVSVPALIYALQNNLQYVALSNLDAATY 121 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhh-hcCHHHHhCh-HH-HHHHHHHHHHHHHhhhHHHHHHhcCCchhh
Confidence 4566777777777766665444433211 1111 1111111111 01 122344566777888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 372 AVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 372 sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
.+...+|...+.++++++++++++..||...++.++|+.+.+
T Consensus 122 qVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 122 QVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887
No 93
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=94.43 E-value=0.056 Score=50.73 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 014037 139 VIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCL-VSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSF 217 (432)
Q Consensus 139 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~ 217 (432)
....+.-+++-++.++-+.++-+-. ++.+..+ .+...+.. ..|..+++++...-+|+...++..+...|++.--++-
T Consensus 204 asvyIilR~iGk~~h~~msvsyf~~-i~lV~s~I~~~~ig~~-~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGp 281 (346)
T KOG4510|consen 204 ASVYIILRYIGKNAHAIMSVSYFSL-ITLVVSLIGCASIGAV-QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGP 281 (346)
T ss_pred hhHHHHHHHhhccccEEEEehHHHH-HHHHHHHHHHhhccce-ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCC
Confidence 3444566777666664443433322 2222222 22222322 2334555566667789999999999999999988888
Q ss_pred HHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhh
Q 014037 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (432)
Q Consensus 218 ~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~ 259 (432)
..+.+.+..+|..+...+++++.++++.|.|.++++...+.+
T Consensus 282 vaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 282 VAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred eehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 999999999999999999999999999999998877765544
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.39 E-value=0.18 Score=40.11 Aligned_cols=45 Identities=22% Similarity=0.203 Sum_probs=25.3
Q ss_pred HHhhccChhHH-HHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHH
Q 014037 361 NTLERVAPLTH-AVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVA 405 (432)
Q Consensus 361 ~~l~~~sa~t~-sv~~~lk~v~~ills~l~fge~~s~~~~iG~~li 405 (432)
..+++.+.... .+...+..+.+.+.|+++|||++|+.+++|+.++
T Consensus 48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 56667665553 7777788999999999999999999999999875
No 95
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.04 E-value=0.36 Score=47.18 Aligned_cols=131 Identities=14% Similarity=0.096 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----hCCchHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHHHHHHHH
Q 014037 129 FFFFMWYFLNVIFNILNKKVYN----YFPYPYFVSVIHLLVGVVYCL-VSWTVGLPQRA------PINKELLVILTPVAF 197 (432)
Q Consensus 129 ~~~~~w~~~s~~~~~~nK~~l~----~f~~P~~lt~~r~~~~~l~l~-~~~~~~~~~~~------~~~~~~~~~~l~~~~ 197 (432)
.....+.+....-+++.|.++. +.+ +..+...+--++.+.++ +++....+... +.+...+ ..+..++
T Consensus 166 i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~sv 243 (316)
T KOG1441|consen 166 ISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFL-ILLLNSV 243 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhH-HHHHHHH
Confidence 4444555555677788888885 244 66666666666666666 55443222111 2222333 3334457
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 198 ~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
+..+.+...+..+..+++=++++.....=+++...++++++++.+..+.+|..+.++|+.+...
T Consensus 244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 7777788889999999999999998888888888899999999999999999999999988753
No 96
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.42 E-value=4.9 Score=39.52 Aligned_cols=143 Identities=18% Similarity=0.161 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHH-HhcchhhhhhhHHHHHhhhchhHHHHHHH
Q 014037 268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAV-LIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (432)
Q Consensus 268 ~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (432)
..|+++..+++++.+.+.+=.||. ++-+..+.-..+.+++-++ +|... ..+-|+..+ .+.......+ ....
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~-----i~~~~~~~~l-~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFS-----IYSATPASTL-FWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHH-----HHHhCChhHH-HHHH
Confidence 579999999999999988888886 3444333333455555544 34433 234443322 2222221111 1112
Q ss_pred HHHH----HHHHHHHHHHHHhhccC-hhHHHHHHHHHHHHHHHHHHHhhC-------cccchhhhHHHHHHHHHHHHHHH
Q 014037 347 WIGM----FYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSIVVFG-------NKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 347 ~~g~----~~~~~~~~~~~~l~~~s-a~t~sv~~~lk~v~~ills~l~fg-------e~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
+.|+ .+..|. ..+++++ ++..++.--+-.++..++--++.| ++-....++|.+++++|+.+..+
T Consensus 78 l~G~lWGIGgltfG----l~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~ 153 (344)
T PF06379_consen 78 LFGVLWGIGGLTFG----LAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK 153 (344)
T ss_pred HHHHHHhcchhhHh----HHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence 2222 222222 2233332 233344333333444444333333 22234678899999999999887
Q ss_pred hhhhhHHh
Q 014037 415 IKANMEEG 422 (432)
Q Consensus 415 ~k~~~~~~ 422 (432)
.-..++++
T Consensus 154 AG~~Ke~~ 161 (344)
T PF06379_consen 154 AGSMKEKE 161 (344)
T ss_pred HHHhhhhh
Confidence 65544443
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.17 E-value=0.86 Score=37.52 Aligned_cols=50 Identities=28% Similarity=0.254 Sum_probs=38.5
Q ss_pred HhhccChhH-HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHH
Q 014037 362 TLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAI 411 (432)
Q Consensus 362 ~l~~~sa~t-~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~l 411 (432)
.+++.+-.. .-+.|.+.-+++.+.++++.+|..+...++|+++++.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 444444332 34557888899999999888888899999999999999864
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=92.07 E-value=0.067 Score=49.66 Aligned_cols=133 Identities=14% Similarity=0.180 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 014037 269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (432)
Q Consensus 269 ~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (432)
.+++.+++-++.|+.--....|... +|.+...-+.+-++++.+...++. .|.. .+ ..+..-+.+
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~GG--~p~qQ~lGtT~GALifaiiv~~~~-~p~~---T~----------~~~iv~~is 65 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKFGG--KPYQQTLGTTLGALIFAIIVFLFV-SPEL---TL----------TIFIVGFIS 65 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeecCC--ChhHhhhhccHHHHHHHHHHheee-cCcc---ch----------hhHHHHHHh
Confidence 3577888888999987776666532 344444444444444433333332 2211 11 233344666
Q ss_pred HHHHHHHHHHHHHHhhccChhHHH-HHHHHHHHHHHHHHHHhhCcccchhhh----HHHHHHHHHHHHHHHhhh
Q 014037 349 GMFYHLYNQLATNTLERVAPLTHA-VGNVLKRVFVIGFSIVVFGNKISTQTG----IGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 349 g~~~~~~~~~~~~~l~~~sa~t~s-v~~~lk~v~~ills~l~fge~~s~~~~----iG~~lii~Gv~ly~~~k~ 417 (432)
|.+..+.+...++..+..+..... +.+-++.+-+.++++++|||=.++.++ +..++++.|+++-++.++
T Consensus 66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 777776666667777666655543 345578889999999999996665543 355677788888776654
No 99
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=87.83 E-value=0.43 Score=47.09 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 345 LFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 345 l~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
.+..|..+++.|+.....+++++....++.....-.++..++.++-+|++|..+.++.++.++|+++.+..+.
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence 3455666777777777889999999999999999999999999999999999999999999999988765543
No 100
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=87.06 E-value=1.1 Score=41.51 Aligned_cols=73 Identities=15% Similarity=0.195 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhh
Q 014037 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (432)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~ 259 (432)
..+..+...+++.+++..+.+.-..+-++=+-+++..+--+|+++.+.++++..++.++|++.++++.|...-
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 4567778889999999999888877776666677777888999999999999999999999999999887643
No 101
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=85.58 E-value=6.3 Score=36.34 Aligned_cols=122 Identities=11% Similarity=0.040 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 014037 136 FLNVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQR-----APINKELLVILTPVAFCHALGHVMSNV 208 (432)
Q Consensus 136 ~~s~~~~~~nK~~l~--~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~l~~~ 208 (432)
..+..+.+..|...+ +|. -....++.-+.+..+++.+.+.-.... .....+-...+++-|++.++-..+.-|
T Consensus 165 lssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saW 243 (309)
T COG5070 165 LSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAW 243 (309)
T ss_pred HhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccce
Confidence 333444445555443 343 344566777777776665433222111 122334455677778888888888999
Q ss_pred HhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhh
Q 014037 209 SFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM 258 (432)
Q Consensus 209 al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l 258 (432)
.+.-++..++.++.++.-...++.+.++++|..+...+.++++++...++
T Consensus 244 cvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred eEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999888889899999999999888888777664443
No 102
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=85.42 E-value=0.45 Score=42.75 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=53.6
Q ss_pred HHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 355 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 355 ~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
-|+.....+++++|...+-....+..++.+++++++||++....++..++.+.|+.+..+..+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 344444788899999999999999999999999999999999999999999999887665543
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.68 E-value=24 Score=34.40 Aligned_cols=131 Identities=14% Similarity=0.153 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCC-chhH--HHHHHHHHHHHHHHHHHHh--cchhhhhhhHHHHHhhhchhHHHHHH
Q 014037 271 FISAMISNIAFTYRSIYSKKAMTGMD-STNV--YAYTSIIALLFCIPPAVLI--EGPQLMQYGFKAAIAKVGLFKFLSDL 345 (432)
Q Consensus 271 ~l~~l~s~l~~Al~~vl~kk~~~~~~-~~~~--~~~~~~~~~~~l~p~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~l 345 (432)
...++.-+++..+-.+..|.....++ |..+ ..+|+..+.+.+...-..- +.+.. ++... .-|
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---~~~~~-------kk~--- 80 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---DLRTA-------KKW--- 80 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---ChHHH-------HHH---
Confidence 44444444444455566676666554 4444 4488888877765443321 11211 11110 001
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 346 ~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
+-..+.++...+.....+++.+--...+.....++.+.+...++||..++...+.....+++|...+..
T Consensus 81 ~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 81 FPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred ccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 222333344444555688899999999999999999999999999999999999999999888877643
No 104
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=78.21 E-value=4 Score=32.86 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHhhccchhHHHH-HhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 197 FCHALGHVMSNVSFATVAVSFTHT-IKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 197 ~~~~~~~~l~~~al~~v~vs~~~i-i~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
++.-.+..++++-++..|.+.+.- -++++-.|+.+++..+-.|......+++..+++.|+.+..
T Consensus 60 llNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 60 LLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 444456778888999998888754 4678889999998754444445888999999999987653
No 105
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.70 E-value=2.1 Score=41.48 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=77.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHH
Q 014037 266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL 345 (432)
Q Consensus 266 ~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l 345 (432)
.+..|.++++.+++..+...++.||...+...... -..+++. ... .. +.+|..
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~----------------ra~~gg~------~yl---~~-~~Ww~G- 70 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGL----------------RAGEGGY------GYL---KE-PLWWAG- 70 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhcc----------------cccCCCc------chh---hh-HHHHHH-
Confidence 45678899999988888888888887544221000 0011111 000 00 112222
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHH
Q 014037 346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSL 414 (432)
Q Consensus 346 ~~~g~~~~~~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~ 414 (432)
++.-..+-..|+.+|. ..++.-.+..+.+..+...+++..+++|+++....+|++++++|....-.
T Consensus 71 ~ltm~vGei~NFaAYa---FAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYA---FAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHhHhhHHHHh---hchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 2222333445555553 56777778888899999999999999999999999999999999875443
No 106
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=71.84 E-value=46 Score=26.96 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhhccchhHHHHHh-hhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhh
Q 014037 199 HALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM 258 (432)
Q Consensus 199 ~~~~~~l~~~al~~v~vs~~~ii~-s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l 258 (432)
+++..-.+-.|.+..+.+.--++. ..+-...+.++.+++||++++....|.+++++++.+
T Consensus 45 Y~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 45 YCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 444444455555554444433332 223333356788999999999999999988887754
No 107
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=70.91 E-value=1.3 Score=41.67 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=49.2
Q ss_pred HHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 355 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 355 ~~~~~~~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
.|+....+.++++-+......+-..+...+++|++++.+..+.++.|.++++.|+.+.-
T Consensus 91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV 149 (336)
T KOG2766|consen 91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVV 149 (336)
T ss_pred ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEE
Confidence 34444455667888888888999999999999999999999999999999999987643
No 108
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.82 E-value=61 Score=25.85 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=26.1
Q ss_pred HHHHHHHccCccChhhHHHHhHHhhhhhhh
Q 014037 230 AAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (432)
Q Consensus 230 ~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~ 259 (432)
+.++.++++|.+.+..+.+..++.+|+.++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999998888765
No 109
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=67.58 E-value=12 Score=35.83 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=45.1
Q ss_pred HHhhccChhHHHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHH
Q 014037 361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 361 ~~l~~~sa~t~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~ 413 (432)
..+..++|..+.+..-.-.+++-+++.-+++.+++..+|+|+..+.+|+....
T Consensus 105 vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 105 VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 34446788888888888888999999999999999999999999999987654
No 110
>PRK02237 hypothetical protein; Provisional
Probab=66.75 E-value=11 Score=30.61 Aligned_cols=46 Identities=20% Similarity=0.102 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHhh
Q 014037 371 HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLIK 416 (432)
Q Consensus 371 ~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~k 416 (432)
++..+-+-.+.+++..+.+-|.+++...++|.+++++|+.+..+.+
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 5667778888999999999999999999999999999998765443
No 111
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=63.93 E-value=68 Score=30.74 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=65.9
Q ss_pred HHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHH-hCCC-C----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 014037 144 LNKKVYNYFPY-PYFVSVIHLLVGVVYCLVSWT-VGLP-Q----RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVS 216 (432)
Q Consensus 144 ~nK~~l~~f~~-P~~lt~~r~~~~~l~l~~~~~-~~~~-~----~~~~~~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs 216 (432)
+.+..++.+|. ...+.++...+|.++++..+. .+.- . -.+...+.....+..++...++...-..-.+--.+.
T Consensus 208 vQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~ 287 (367)
T KOG1582|consen 208 VQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGAL 287 (367)
T ss_pred HHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchh
Confidence 34555554442 334555566666665543322 1110 0 011122333334444444333332211112223444
Q ss_pred HHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCc
Q 014037 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL 264 (432)
Q Consensus 217 ~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~ 264 (432)
.+.++...-=..|.++|++++.++++..-..+.++++.|+.+-.+++.
T Consensus 288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 555555555567788899999999999888899999999998766653
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=62.67 E-value=54 Score=26.54 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhCcccchhhhHHHHHHHHHHHH
Q 014037 380 VFVIGFSIVVFGNKISTQTGIGTAVAIAGVAI 411 (432)
Q Consensus 380 v~~ills~l~fge~~s~~~~iG~~lii~Gv~l 411 (432)
.+-+.++++++||++++.++.|.++++.+++.
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred heeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 34456789999999999999999999877653
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=62.16 E-value=12 Score=30.32 Aligned_cols=45 Identities=24% Similarity=0.179 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHh
Q 014037 371 HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 371 ~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~ 415 (432)
++..+-+-.+.+++.++.+-|++++...++|.++++.|+.+..+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 466777888999999999999999999999999999999875544
No 114
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=50.00 E-value=5.4 Score=37.96 Aligned_cols=92 Identities=7% Similarity=0.026 Sum_probs=0.0
Q ss_pred cchhHHHHHhhhhHHHHHHH-HHHHccCccC-hhhHHHHhHHhhhhhhhccCC--ccccHHHHHHHHHHH----HHHHHH
Q 014037 213 VAVSFTHTIKALEPFFNAAA-SQFVLGHQIP-LSLWLSLAPVVIGVSMASLTE--LSFNWTGFISAMISN----IAFTYR 284 (432)
Q Consensus 213 v~vs~~~ii~s~~Pvft~il-s~~~l~e~~~-~~~~lsl~~~~~Gv~l~~~~~--~~~~~~G~l~~l~s~----l~~Al~ 284 (432)
.+-+-.+++.+...+.++|+ -.+++++|+- ..-.++++++++-..+...-. .+.-+.|+++.++.. ..|. |
T Consensus 47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~-Y 125 (381)
T PF05297_consen 47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWF-Y 125 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH-H
Confidence 33333445555444443333 3455666664 444555555554444333221 122345655443322 2222 2
Q ss_pred HHHHhhhcCCCCchhHHHHHHHH
Q 014037 285 SIYSKKAMTGMDSTNVYAYTSII 307 (432)
Q Consensus 285 ~vl~kk~~~~~~~~~~~~~~~~~ 307 (432)
.-+.|++ +.+.|+++++...+
T Consensus 126 m~lLr~~--GAs~WtiLaFcLAF 146 (381)
T PF05297_consen 126 MWLLREL--GASFWTILAFCLAF 146 (381)
T ss_dssp -----------------------
T ss_pred HHHHHHh--hhHHHHHHHHHHHH
Confidence 2233333 34567776654433
No 115
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=49.25 E-value=2.1e+02 Score=26.09 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=23.8
Q ss_pred hhhHHHHHHHHHHHccCccCh-------------hhHHHHhHHhhhhhhh
Q 014037 223 ALEPFFNAAASQFVLGHQIPL-------------SLWLSLAPVVIGVSMA 259 (432)
Q Consensus 223 s~~Pvft~ils~~~l~e~~~~-------------~~~lsl~~~~~Gv~l~ 259 (432)
...|+...++.+.+.+||... +++.+.++.++|+.++
T Consensus 160 ~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~ 209 (214)
T PF11139_consen 160 ASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLL 209 (214)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 566777777788777776632 4455666666666554
No 116
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=48.92 E-value=1.5e+02 Score=28.60 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHH-------HHhCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHH
Q 014037 136 FLNVIFNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVS-------WTVGLPQRAPINKELLVILTPVAFCHALGH-VMS 206 (432)
Q Consensus 136 ~~s~~~~~~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~ 206 (432)
..+..+.++++..+++++ ++-...++--+....+.++. |.. ..+.++..-......+|....+.+.+ ..+
T Consensus 174 ~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~-~~~se~~~~p~~g~~vP~~~~yLl~n~L~Q 252 (330)
T KOG1583|consen 174 LLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRL-AFKSESYLIPLLGFKVPSMWVYLLFNVLTQ 252 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHH-HhcCcceeccccCccccHHHHHHHHHHHHH
Confidence 456778889999988654 45555555544444333221 100 00011000000011133333333332 223
Q ss_pred HHHhhcc-------chhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 207 NVSFATV-------AVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 207 ~~al~~v-------~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
+.+.+.+ +.=+.+++..+-=++..++|.+.++..++++.|+|.+++++|..+.+
T Consensus 253 y~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 253 YFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 3333332 11112233344456778889999999999999999999999988764
No 117
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=47.13 E-value=1.9e+02 Score=29.80 Aligned_cols=130 Identities=14% Similarity=0.148 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 014037 269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (432)
Q Consensus 269 ~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (432)
.|++..+.+ +.|++..-++--+.++.+|...+....+.+.+..+.+.... .+ ..+....++.
T Consensus 66 lG~i~s~f~-i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~---s~--------------~~~~~l~~ln 127 (448)
T COG2271 66 LGILGSAFS-ITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP---SL--------------FLFAVLWVLN 127 (448)
T ss_pred HHHHHHHHH-HHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh---HH--------------HHHHHHHHHH
Confidence 566665544 77888887777777778887777766666666554333221 10 0122222333
Q ss_pred HHHHHH------HHHHHHHHhhccC------hhHHHHHHHHHHHHHHHHHHHhhCcccchh-hhHHHHHHHHHHHHHHHh
Q 014037 349 GMFYHL------YNQLATNTLERVA------PLTHAVGNVLKRVFVIGFSIVVFGNKISTQ-TGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 349 g~~~~~------~~~~~~~~l~~~s------a~t~sv~~~lk~v~~ills~l~fge~~s~~-~~iG~~lii~Gv~ly~~~ 415 (432)
|.+... -.+..+..-++-+ ...+++.+.+-++++.+ +++.++...... -.-|++.++.|++++.+.
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 333221 1112222222211 34567777777776655 666655432222 334777778888888766
Q ss_pred hh
Q 014037 416 KA 417 (432)
Q Consensus 416 k~ 417 (432)
|.
T Consensus 207 rd 208 (448)
T COG2271 207 RD 208 (448)
T ss_pred CC
Confidence 54
No 118
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=45.95 E-value=3.1e+02 Score=27.20 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHHcc-------CccChhhHHHHhHHhhhhh
Q 014037 186 KELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLG-------HQIPLSLWLSLAPVVIGVS 257 (432)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii-~s~~Pvft~ils~~~l~-------e~~~~~~~lsl~~~~~Gv~ 257 (432)
.+.+......|++...+...+-.+.+|+.+|..+-+ --++-++-.++-.++.+ ++-....++++++.++|++
T Consensus 70 ~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 70 ASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA 149 (344)
T ss_pred hhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence 345566677899999999999999999888876543 33444444454444443 2334578899999999999
Q ss_pred hhccC----C-------cccc-HHHHHHHHHHHHHHHHHHHHHh
Q 014037 258 MASLT----E-------LSFN-WTGFISAMISNIAFTYRSIYSK 289 (432)
Q Consensus 258 l~~~~----~-------~~~~-~~G~l~~l~s~l~~Al~~vl~k 289 (432)
+.... | .++| -.|++.++++.+..|..+.=..
T Consensus 150 i~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 150 ICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 87431 1 1344 3699999999888887776443
No 119
>COG4147 DhlC Predicted symporter [General function prediction only]
Probab=37.51 E-value=2.8e+02 Score=28.95 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=39.0
Q ss_pred HHhhccChhHHHHHHHHHHHHHHHHHHHhh------------CcccchhhhHHHHHHHHHHHHHHHhhhhhHHh
Q 014037 361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVF------------GNKISTQTGIGTAVAIAGVAIYSLIKANMEEG 422 (432)
Q Consensus 361 ~~l~~~sa~t~sv~~~lk~v~~ills~l~f------------ge~~s~~~~iG~~lii~Gv~ly~~~k~~~~~~ 422 (432)
+=..+.++..-.+.+..-.+.-++++-.++ +-+++....+|+.+-+.+..+.+...+..+++
T Consensus 441 Kr~n~~GAi~G~~~GL~~tlv~i~l~~~i~~~~~~~~~~~~~~~~~~~~g~~sipv~F~~~~ivSllt~~~~~~ 514 (529)
T COG4147 441 KRLNTAGAIAGMLLGLIVTLVLIILSPTIWVVILGHPGFGWAGFPYEGPGLFSIPVGFLGAWIVSLLTKPPEED 514 (529)
T ss_pred hhccHHhHHHHHHHHHHHHHHHHHhCccccccccCccccccccCCCCCcchhhhhHHHHHhHheeccCCCCchH
Confidence 333445566666666655555555555333 33677888899999999988888665444333
No 120
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.75 E-value=2.2e+02 Score=22.79 Aligned_cols=31 Identities=10% Similarity=0.119 Sum_probs=26.2
Q ss_pred HHHHHHHHhhCcccchhhhHHHHHHHHHHHH
Q 014037 381 FVIGFSIVVFGNKISTQTGIGTAVAIAGVAI 411 (432)
Q Consensus 381 ~~ills~l~fge~~s~~~~iG~~lii~Gv~l 411 (432)
+-+.+|+++++|++.+..+.|.+++..|+.+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 3446799999999999999999999877765
No 121
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=35.78 E-value=51 Score=31.59 Aligned_cols=130 Identities=10% Similarity=0.012 Sum_probs=73.4
Q ss_pred HHHHHHHHHHH-HHHHHHHHhhC-CchHHHHHHHHHHHHHHHHHHHHhCCC--C--C--CCCCHHHHHHHHHHHHHHHHH
Q 014037 131 FFMWYFLNVIF-NILNKKVYNYF-PYPYFVSVIHLLVGVVYCLVSWTVGLP--Q--R--APINKELLVILTPVAFCHALG 202 (432)
Q Consensus 131 ~~~w~~~s~~~-~~~nK~~l~~f-~~P~~lt~~r~~~~~l~l~~~~~~~~~--~--~--~~~~~~~~~~~l~~~~~~~~~ 202 (432)
+.+|-.+...+ .+..|..+... +--|.++++..+.+.++.++....... + . .....+.|..+.+-|++....
T Consensus 189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m 268 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM 268 (347)
T ss_pred HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence 34444333333 36667665532 346778888888888776665443221 0 1 112445666666556654433
Q ss_pred HHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhc
Q 014037 203 HVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 203 ~~l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~ 260 (432)
.....+-.+.+++=++.+-....-..=.+++..+.+|.-+...|-+-+++..|..+..
T Consensus 269 gyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 269 GYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred hheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 3333333344444444333333344445678889999999888888888888776543
No 122
>PRK02237 hypothetical protein; Provisional
Probab=35.14 E-value=64 Score=26.26 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 224 LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 224 ~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
...+...+..+.+-|+++++..+++..++++|+.++.+
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 33444556678889999999999999999999987644
No 123
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=35.13 E-value=1.3e+02 Score=25.15 Aligned_cols=39 Identities=23% Similarity=0.444 Sum_probs=27.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHH
Q 014037 123 PALVTGFFFFMWYFLNVIFNILNKKVYNYFP-YPYFVSVI 161 (432)
Q Consensus 123 ~~l~~~~~~~~w~~~s~~~~~~nK~~l~~f~-~P~~lt~~ 161 (432)
..+.+.+++++..+.+++-.++-|.++..++ ||++++-+
T Consensus 54 e~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~Ql 93 (130)
T PF08627_consen 54 ENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQL 93 (130)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHh
Confidence 4566777777776666666688888888765 78777644
No 124
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=34.93 E-value=2.5e+02 Score=26.21 Aligned_cols=18 Identities=17% Similarity=0.283 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014037 270 GFISAMISNIAFTYRSIY 287 (432)
Q Consensus 270 G~l~~l~s~l~~Al~~vl 287 (432)
..+.+.++++.+..|.++
T Consensus 196 ~~vya~lgAllf~~yl~~ 213 (237)
T KOG2322|consen 196 VMVYAALGALLFCGYLVY 213 (237)
T ss_pred HHHHHHHHHHHHhHHHHh
Confidence 344444444444444443
No 125
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=33.87 E-value=60 Score=26.34 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhcc
Q 014037 224 LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (432)
Q Consensus 224 ~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~ 261 (432)
...+...+-.+.+-|+++++..+++..++++|+.++.+
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 34455566678889999999999999999999987654
No 126
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=33.10 E-value=4.7e+02 Score=25.52 Aligned_cols=43 Identities=28% Similarity=0.329 Sum_probs=33.2
Q ss_pred hhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHH
Q 014037 243 LSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRS 285 (432)
Q Consensus 243 ~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~ 285 (432)
.....++++++.|..++.+....++++=.++++++++..-...
T Consensus 18 ~Tl~aai~Pv~~G~a~A~~~~~~f~~~~~ll~Li~~~~iq~~v 60 (303)
T COG1575 18 KTLPAAIAPVIVGTALAFWYGKSFNLLVALLALIAAILLQILV 60 (303)
T ss_pred cchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 3446789999999999988887899888888777776554433
No 127
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=32.77 E-value=4.4e+02 Score=25.05 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=27.0
Q ss_pred HHHHHhhC-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH
Q 014037 145 NKKVYNYF-PYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHAL 201 (432)
Q Consensus 145 nK~~l~~f-~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 201 (432)
.|.+-+.+ +.|..+. +-+.++.+++...-..+.++.++.+.-.++..+.+|+++++
T Consensus 100 ~~~i~~~~~~~~~~v~-~~Li~~g~lL~~~~~~~~~~~~~~~~~~~~dal~iGl~Q~l 156 (259)
T PF02673_consen 100 KDFIEALFFSSPLVVA-IALIITGLLLWLADRLKRKGRKDEEDITFKDALIIGLAQGL 156 (259)
T ss_pred HHHHHHHhhhchHHHH-HHHHHHHHHHHHHHHHccCCCCCcccCCHHHHHHHHHHHHc
Confidence 34433334 3465554 44444444444433333321222233346677778888764
No 128
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=30.85 E-value=47 Score=32.26 Aligned_cols=136 Identities=15% Similarity=0.079 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHh---cchh-hhhhhHHHHHhhhchhHHHHHHHHHHHH
Q 014037 276 ISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLI---EGPQ-LMQYGFKAAIAKVGLFKFLSDLFWIGMF 351 (432)
Q Consensus 276 ~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~~~~---e~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 351 (432)
++.+||+.+...+|-..++-...+..+|=..++.++...+..+. -++. .....+-+-+.+.+++.+. ..+..|+.
T Consensus 3 itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~-~A~aGGvv 81 (336)
T PF07168_consen 3 ITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVL-FAMAGGVV 81 (336)
T ss_pred eehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHH-HHHHhhHh
Confidence 45677777666666554322222223333333333332222222 1110 0111122223445554433 34455666
Q ss_pred HHHHHHHHHHHhhccChhHH-HHHHHHHHHHHHHHHHHhhCcccc--hhhhHHHHHHHHHHHHHH
Q 014037 352 YHLYNQLATNTLERVAPLTH-AVGNVLKRVFVIGFSIVVFGNKIS--TQTGIGTAVAIAGVAIYS 413 (432)
Q Consensus 352 ~~~~~~~~~~~l~~~sa~t~-sv~~~lk~v~~ills~l~fge~~s--~~~~iG~~lii~Gv~ly~ 413 (432)
..+.|+.....+...+-... -+...+..++.+++-++. +++.. ..-+.|.+++++.+.+-.
T Consensus 82 fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 82 FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence 66666655544444332211 112222333333333332 33333 234457776666665533
No 129
>PRK10666 ammonium transporter; Provisional
Probab=28.87 E-value=6.6e+02 Score=25.87 Aligned_cols=47 Identities=13% Similarity=0.065 Sum_probs=23.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhcCCCC---chhHHHHHHHHHHHHHH
Q 014037 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMD---STNVYAYTSIIALLFCI 313 (432)
Q Consensus 267 ~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~---~~~~~~~~~~~~~~~l~ 313 (432)
.+..++.++++++..-+...+.|+..+-.| ...+=....+++.+...
T Consensus 303 p~~A~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~g 352 (428)
T PRK10666 303 VGGALIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTG 352 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHH
Confidence 355666666666655444334454333233 34444455555555443
No 130
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=28.44 E-value=2e+02 Score=24.74 Aligned_cols=10 Identities=20% Similarity=0.311 Sum_probs=5.3
Q ss_pred HHHHhhCccc
Q 014037 385 FSIVVFGNKI 394 (432)
Q Consensus 385 ls~l~fge~~ 394 (432)
...++++|.+
T Consensus 96 a~~L~~~e~~ 105 (150)
T COG3086 96 AQYLFFSELI 105 (150)
T ss_pred HHHHhhhhHH
Confidence 4555566643
No 131
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=26.33 E-value=89 Score=24.28 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=20.0
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhh
Q 014037 393 KISTQTGIGTAVAIAGVAIYSLIKA 417 (432)
Q Consensus 393 ~~s~~~~iG~~lii~Gv~ly~~~k~ 417 (432)
..++..++|++++++|..+|..++.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~ 28 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFF 28 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999975443
No 132
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=25.84 E-value=91 Score=21.38 Aligned_cols=24 Identities=13% Similarity=0.142 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHhHH
Q 014037 401 GTAVAIAGVAIYSLIKANMEEGKR 424 (432)
Q Consensus 401 G~~lii~Gv~ly~~~k~~~~~~~~ 424 (432)
-..++++|+++|.+.++++++-.+
T Consensus 18 ~~~~~Figiv~wa~~p~~k~~f~e 41 (48)
T cd01324 18 YLALFFLGVVVWAFRPGRKKAFDE 41 (48)
T ss_pred HHHHHHHHHHHHHhCCCcchhHHH
Confidence 346778899999988766554433
No 133
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=24.93 E-value=89 Score=26.52 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=26.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 014037 265 SFNWTGFISAMISNIAFTYRSIYSKKAMTGMD 296 (432)
Q Consensus 265 ~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~ 296 (432)
+.+..|.++.-.-.+.|++|.++.|.+-++.|
T Consensus 102 sn~~LgwIL~gVf~lIWslY~~~~~~l~eded 133 (138)
T PF07123_consen 102 SNNLLGWILLGVFGLIWSLYFVYTSTLDEDED 133 (138)
T ss_pred cCchhHHHHHHHHHHHHHHHHhhccccCCCcc
Confidence 45678888888888999999999998776544
No 134
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=24.45 E-value=7.8e+02 Score=25.27 Aligned_cols=22 Identities=14% Similarity=0.250 Sum_probs=16.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhh
Q 014037 397 QTGIGTAVAIAGVAIYSLIKAN 418 (432)
Q Consensus 397 ~~~iG~~lii~Gv~ly~~~k~~ 418 (432)
....|.++...|..+|.+.+++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3556888888998888775543
No 135
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=23.91 E-value=6.3e+02 Score=23.97 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHH-HHHHHHHH-HccC---cc--ChhhHHHHhHHhhhhhhhc
Q 014037 191 ILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPF-FNAAASQF-VLGH---QI--PLSLWLSLAPVVIGVSMAS 260 (432)
Q Consensus 191 ~~l~~~~~~~~~~~l~~~al~~v~vs~~~ii~s~~Pv-ft~ils~~-~l~e---~~--~~~~~lsl~~~~~Gv~l~~ 260 (432)
..++.|++++.++.+..-..+.+..+....+=++.-+ .--..+++ ++++ .+ ++..+++++++++|.++..
T Consensus 57 ~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 57 WAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred HHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 3455679999999999999999999998888665333 33333333 3332 22 3677788888888877653
No 136
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=23.79 E-value=1.9e+02 Score=20.30 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=30.3
Q ss_pred hHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHHHHHhhhc
Q 014037 245 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAM 292 (432)
Q Consensus 245 ~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~vl~kk~~ 292 (432)
.+++.+++++|+++...++. |.+..+++....+...-..|+..
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp-----G~l~i~~GL~iLa~ef~wArr~l 47 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP-----GLLVIFLGLAILATEFPWARRLL 47 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC-----cHHHHHHHHHHHHHhhHHHHHHH
Confidence 46788888999998887764 55566666666666666666654
No 137
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]
Probab=23.48 E-value=5.2e+02 Score=24.12 Aligned_cols=23 Identities=17% Similarity=0.319 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCCch
Q 014037 133 MWYFLNVIFNILNKKVYNYFPYP 155 (432)
Q Consensus 133 ~w~~~s~~~~~~nK~~l~~f~~P 155 (432)
+|.+.+......+|++.++++.|
T Consensus 9 f~l~lTl~~y~~a~~l~~r~~~~ 31 (230)
T COG1346 9 FGLLLTLLAYFAAKRLYKRTKSP 31 (230)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCc
Confidence 35556667778899999986633
No 138
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=23.45 E-value=2.5e+02 Score=27.56 Aligned_cols=49 Identities=16% Similarity=0.240 Sum_probs=31.9
Q ss_pred hccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhh
Q 014037 211 ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (432)
Q Consensus 211 ~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~ 259 (432)
..+++=+-++..-..-+.+.+++..+++++++...|+++.+...|+.+-
T Consensus 265 ~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 265 SRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred eeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 3344333344444444566677778888888888888888888877665
No 139
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=22.64 E-value=1e+02 Score=24.98 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccC
Q 014037 225 EPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (432)
Q Consensus 225 ~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~ 262 (432)
..+...+..+++-|++++++.+.+.+++++|+.++...
T Consensus 68 yI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 68 YIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34455566778889999999999999999998766543
No 140
>COG1299 FruA Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]
Probab=22.34 E-value=7.8e+02 Score=24.49 Aligned_cols=65 Identities=23% Similarity=0.281 Sum_probs=39.2
Q ss_pred HHHhhhhHHHHHHHHHHHccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 014037 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMT 293 (432)
Q Consensus 219 ~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~ 293 (432)
..++.+.|++..-.++=+- +|+ ++.++++|..+....- ...|++-++++.+.-+.--.+.||..+
T Consensus 55 ~af~lmvpvlagyia~Sia-drp------gLapG~igg~~a~~~~---g~aGFlG~ii~GflAGy~v~~l~k~~~ 119 (343)
T COG1299 55 LAFGLMVPVLAAYIAYSIA-DRP------GLAPGFIGGLLANSVI---GGAGFLGAIIAGFLAGYVVKWLKKYIE 119 (343)
T ss_pred HHHHHHHHHHHHHHHHHhh-ccc------cccchHHHhHHhhccc---ccchhhHHHHHHHHHHHHHHHHHHHhh
Confidence 3455667777766665333 232 6677777777766421 124677777777766666666666654
No 141
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=21.74 E-value=7.5e+02 Score=24.06 Aligned_cols=44 Identities=16% Similarity=0.291 Sum_probs=27.6
Q ss_pred HHHHHhhccchhHHHHHhhhhHHHHHHHHHHHccCccChhhHHHH
Q 014037 205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSL 249 (432)
Q Consensus 205 l~~~al~~v~vs~~~ii~s~~Pvft~ils~~~l~e~~~~~~~lsl 249 (432)
+.-.++++..++ ..=+..++|+++.+...++.++.-++...++.
T Consensus 180 L~Ga~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg~ 223 (299)
T PF05884_consen 180 LVGAGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLGI 223 (299)
T ss_pred HHHHHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHHH
Confidence 333455555444 36667788888877777777774456655554
No 142
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=21.74 E-value=2.1e+02 Score=24.00 Aligned_cols=19 Identities=16% Similarity=-0.033 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014037 370 THAVGNVLKRVFVIGFSIV 388 (432)
Q Consensus 370 t~sv~~~lk~v~~ills~l 388 (432)
..+...++-|++..+++.+
T Consensus 69 ~aa~l~Y~lPll~li~g~~ 87 (135)
T PF04246_consen 69 KAAFLVYLLPLLALIAGAV 87 (135)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555444
No 143
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=21.19 E-value=1.7e+02 Score=23.66 Aligned_cols=45 Identities=24% Similarity=0.183 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCcccchhhhHHHHHHHHHHHHHHHh
Q 014037 371 HAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAVAIAGVAIYSLI 415 (432)
Q Consensus 371 ~sv~~~lk~v~~ills~l~fge~~s~~~~iG~~lii~Gv~ly~~~ 415 (432)
++-.+-+-.+.+.+..+++=|..++...++|.+++++|+.+..+.
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 355566777888888999989999999999999999997665443
No 144
>COG4292 Predicted membrane protein [Function unknown]
Probab=20.93 E-value=4.2e+02 Score=26.51 Aligned_cols=85 Identities=26% Similarity=0.273 Sum_probs=0.0
Q ss_pred ccCccChhhHHHHhHHhhhhhhhccCCccccHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 014037 237 LGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPA 316 (432)
Q Consensus 237 l~e~~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~l~~Al~~vl~kk~~~~~~~~~~~~~~~~~~~~~l~p~~ 316 (432)
++++.-+.++.-+..++.|+.+...-+..|.-.|+.++++-+..+-.+..+-....++.|+-.....+-+.+.+.+..+.
T Consensus 75 ~g~e~~~~rl~l~~~Mf~~vlLa~sl~~aF~~tg~~Falay~~mq~~~~l~~l~a~r~~d~~~~~~~~r~~svl~vss~~ 154 (387)
T COG4292 75 LGTEIEPVRLLLLVLMFFGVLLAASLPPAFEKTGLPFALAYSIMQLSRSLFYLWAFRGLDPGDRRTFQRIASVLGVSSFF 154 (387)
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHhchHhHHhcCcHHHHHHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHH
Q ss_pred HHhcc
Q 014037 317 VLIEG 321 (432)
Q Consensus 317 ~~~e~ 321 (432)
.+..+
T Consensus 155 wl~s~ 159 (387)
T COG4292 155 WLTSG 159 (387)
T ss_pred HHHhh
Done!