BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014038
(432 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 174/300 (58%), Gaps = 21/300 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-E 152
V + +S ++LQ A+ NF+ ++G+G FG VYK +++ G VAVK L + QG E
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE 79
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWN 210
+FQTEV ++ HRNL+ L G+C + +LVY +M+ GS+AS L + E+ PL W
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR-EEMVDKHA 269
R IAL ARGL YLHD P +IHRD+K++NILLD+ A V DFGL++ + D H
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 199
Query: 270 AN-IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEG 328
+RGT G++ PEY+ST ++K+DV+ +GV+L ELI G Q + LA +
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG----QRAFDLARLANDDDVM 255
Query: 329 KTGW----------EEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLS 378
W E +VD L G + EE+ ++ +A C +P +RP M ++V++L
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 174/292 (59%), Gaps = 21/292 (7%)
Query: 104 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-EKEFQTEVM 160
+S ++LQ A+ NF ++G+G FG VYK +++ G VAVK L + QG E +FQTEV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALD 218
++ HRNL+ L G+C + +LVY +M+ GS+AS L + E+ PL W R IAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR-EEMVDKHAAN-IRGTF 276
ARGL YLHD P +IHRD+K++NILLD+ A V DFGL++ + D H +RG
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ----------GLMEYVELAAMNT 326
G++ PEY+ST ++K+DV+ +GV+L ELI G+ L+++V+ +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK--GLLK 257
Query: 327 EGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLS 378
E K E +VD L G + EE+ ++ +A C +P +RP M ++V++L
Sbjct: 258 EKKL--EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 174/299 (58%), Gaps = 18/299 (6%)
Query: 101 IPEYSYK----DLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
+P SY+ DL++AT NF LIG G FG VYK + G VA+K +S QG +E
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLR 212
F+TE+ L H +LV+L+G+C E+ + +L+Y +M G+L HLY D ++W R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE--EMVDKHAA 270
+ I + ARGL YLH A +IHRD+KS NILLD++ ++ DFG+S++ E+ H
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 271 N-IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPL-QGL-MEYVELA--AMN 325
++GT GY+DPEY T+KSDVYSFGV+LFE++ RS + Q L E V LA A+
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 326 TEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
+ E+IVD L E L + A KC+ + RPSM D++ L L+++
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 174/299 (58%), Gaps = 18/299 (6%)
Query: 101 IPEYSYK----DLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
+P SY+ DL++AT NF LIG G FG VYK + G VA+K +S QG +E
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLR 212
F+TE+ L H +LV+L+G+C E+ + +L+Y +M G+L HLY D ++W R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE--EMVDKHAA 270
+ I + ARGL YLH A +IHRD+KS NILLD++ ++ DFG+S++ E+ H
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 271 N-IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPL-QGL-MEYVELA--AMN 325
++GT GY+DPEY T+KSDVYSFGV+LFE++ RS + Q L E V LA A+
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 326 TEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
+ E+IVD L E L + A KC+ + RPSM D++ L L+++
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 96 VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
VS + +S+ +L+ T NF +G+G FG VYK ++ TVAVK LA
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAM 65
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-E 202
+++ +++F E+ ++ + H NLV L+G+ ++ LVYV+M GSL L +
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE 262
PL+W++R IA A G+ +LH+ IHRDIKS+NILLD++ A+++DFGL+R
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 263 EMVDKHA-----ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAG-------RS 310
+K A + I GT Y+ PE + T KSD+YSFGV+L E+I G R
Sbjct: 183 S--EKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 311 PLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSM 370
P Q L++ E + + +D +++ D + + S+A +C++ KRP +
Sbjct: 240 P-QLLLDIKEEIEDEEKTIEDY---IDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 371 RDIVQVLSRI 380
+ + Q+L +
Sbjct: 295 KKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 165/310 (53%), Gaps = 37/310 (11%)
Query: 96 VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
VS + +S+ +L+ T NF +G+G FG VYK ++ TVAVK LA
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAM 65
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-E 202
+++ +++F E+ ++ + H NLV L+G+ ++ LVYV+M GSL L +
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE 262
PL+W++R IA A G+ +LH+ IHRDIKS+NILLD++ A+++DFGL+R
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 263 EMVDKHAAN-----IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAG-------RS 310
+K A I GT Y+ PE + T KSD+YSFGV+L E+I G R
Sbjct: 183 S--EKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 311 PLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSM 370
P Q L++ E + + +D +++ D + + S+A +C++ KRP +
Sbjct: 240 P-QLLLDIKEEIEDEEKTIEDY---IDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 371 RDIVQVLSRI 380
+ + Q+L +
Sbjct: 295 KKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 165/310 (53%), Gaps = 37/310 (11%)
Query: 96 VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
VS + +S+ +L+ T NF +G+G FG VYK ++ TVAVK LA
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAM 59
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-E 202
+++ +++F E+ ++ + H NLV L+G+ ++ LVYV+M GSL L +
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE 262
PL+W++R IA A G+ +LH+ IHRDIKS+NILLD++ A+++DFGL+R
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 263 EMVDKHA-----ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAG-------RS 310
+K A I GT Y+ PE + T KSD+YSFGV+L E+I G R
Sbjct: 177 S--EKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 311 PLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSM 370
P Q L++ E + + +D +++ D + + S+A +C++ KRP +
Sbjct: 234 P-QLLLDIKEEIEDEEKTIEDY---IDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDI 288
Query: 371 RDIVQVLSRI 380
+ + Q+L +
Sbjct: 289 KKVQQLLQEM 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 147/282 (52%), Gaps = 23/282 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK--EFQTEVMLLGRL 165
D+ N IG G+FG V++A+ G VAVK+L E+ EF EV ++ RL
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENY-GPLTWNLRVHIALDVARGLE 224
H N+V +G + +V ++S+GSL L+ L R+ +A DVA+G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREE----MVDKHAANIRGTFGYLD 280
YLH+ PP++HRD+KS N+L+D+ +V DFGLSR + + K AA GT ++
Sbjct: 152 YLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA---GTPEWMA 207
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRL 340
PE + +KSDVYSFGV+L+EL + P L +AA+ + K RL
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK---------RL 258
Query: 341 DGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+ ++ +VA++ C P KRPS I+ +L ++K
Sbjct: 259 EIPRNLNP--QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 37/299 (12%)
Query: 104 YSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT----DSKQG 151
+S+ +L+ T NF G+G FG VYK ++ TVAVK LA +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWN 210
+++F E+ + + H NLV L+G+ ++ LVYV+ GSL L + PL+W+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHA- 269
R IA A G+ +LH+ IHRDIKS+NILLD++ A+++DFGL+R +K A
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS--EKFAQ 179
Query: 270 ----ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAG-------RSPLQGLMEY 318
+ I GT Y PE + T KSD+YSFGV+L E+I G R P Q L++
Sbjct: 180 XVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDI 237
Query: 319 VELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVL 377
E + + +D + + D + S+A +C++ KRP ++ + Q+L
Sbjct: 238 KEEIEDEEKTIEDY---IDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 23/282 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK--EFQTEVMLLGRL 165
D+ N IG G+FG V++A+ G VAVK+L E+ EF EV ++ RL
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENY-GPLTWNLRVHIALDVARGLE 224
H N+V +G + +V ++S+GSL L+ L R+ +A DVA+G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREE----MVDKHAANIRGTFGYLD 280
YLH+ PP++HR++KS N+L+D+ +V DFGLSR + + K AA GT ++
Sbjct: 152 YLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA---GTPEWMA 207
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRL 340
PE + +KSDVYSFGV+L+EL + P L +AA+ + K RL
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK---------RL 258
Query: 341 DGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+ ++ +VA++ C P KRPS I+ +L ++K
Sbjct: 259 EIPRNLNP--QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 138/288 (47%), Gaps = 34/288 (11%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS----KQGEKEFQTEVMLLG 163
++ A +IG G FG VY+A G+ VAVK D Q + + E L
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
L H N++ L G C ++ LV F G L L + P ++ V+ A+ +ARG+
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGM 118
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMR--------ARVADFGLSRE-EMVDKHAANIRG 274
YLHD A+ P+IHRD+KSSNIL+ Q + ++ DFGL+RE K +A G
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA--AG 176
Query: 275 TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGW 332
+ ++ PE I F+K SDV+S+GVLL+EL+ G P +G+ + AMN
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP-- 234
Query: 333 EEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+ S F A L C N P RPS +I+ L+ I
Sbjct: 235 ---IPSTCPEPF--------AKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 40/305 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE-- 152
+ S P+ L + IG+G FG V+K ++ ++V A+K L +GE
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 153 -----KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
+EFQ EV ++ L+H N+V L G + +V F+ G L L D+ + P+
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PI 119
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILL-----DQSMRARVADFGLSRE 262
W++++ + LD+A G+EY+ + PP++HRD++S NI L + + A+VADFGLS++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
Query: 263 EMVDKHAANIRGTFGYLDPEYIST--RNFTKKSDVYSFGVLLFELIAGRSPLQ----GLM 316
+ + + G F ++ PE I ++T+K+D YSF ++L+ ++ G P G +
Sbjct: 179 SV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 317 EYVELAAMNTEG-KTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+++ + + EG + E RL + ++ C + P+KRP IV+
Sbjct: 237 KFINM--IREEGLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVK 282
Query: 376 VLSRI 380
LS +
Sbjct: 283 ELSEL 287
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 162/327 (49%), Gaps = 43/327 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRKHHRKSQ 394
P+ + +V+ L RIL + N ++ SQ
Sbjct: 304 PTFKQLVEDLDRILTLTTNEEYLDLSQ 330
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 154/305 (50%), Gaps = 40/305 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE-- 152
+ S P+ L + IG+G FG V+K ++ ++V A+K L +GE
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 153 -----KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
+EFQ EV ++ L+H N+V L G + +V F+ G L L D+ + P+
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PI 119
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILL-----DQSMRARVADFGLSRE 262
W++++ + LD+A G+EY+ + PP++HRD++S NI L + + A+VADFG S++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ 178
Query: 263 EMVDKHAANIRGTFGYLDPEYIST--RNFTKKSDVYSFGVLLFELIAGRSPLQ----GLM 316
+ + + G F ++ PE I ++T+K+D YSF ++L+ ++ G P G +
Sbjct: 179 SV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 317 EYVELAAMNTEG-KTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+++ + + EG + E RL + ++ C + P+KRP IV+
Sbjct: 237 KFINM--IREEGLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVK 282
Query: 376 VLSRI 380
LS +
Sbjct: 283 ELSEL 287
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 162/327 (49%), Gaps = 43/327 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRKHHRKSQ 394
P+ + +V+ L RIL + N ++ SQ
Sbjct: 304 PTFKQLVEDLDRILTLTTNEEYLDLSQ 330
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 154/305 (50%), Gaps = 40/305 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE-- 152
+ S P+ L + IG+G FG V+K ++ ++V A+K L +GE
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 153 -----KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
+EFQ EV ++ L+H N+V L G + +V F+ G L L D+ + P+
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PI 119
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILL-----DQSMRARVADFGLSRE 262
W++++ + LD+A G+EY+ + PP++HRD++S NI L + + A+VADF LS++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ 178
Query: 263 EMVDKHAANIRGTFGYLDPEYIST--RNFTKKSDVYSFGVLLFELIAGRSPLQ----GLM 316
+ + + G F ++ PE I ++T+K+D YSF ++L+ ++ G P G +
Sbjct: 179 SV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 317 EYVELAAMNTEG-KTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+++ + + EG + E RL + ++ C + P+KRP IV+
Sbjct: 237 KFINM--IREEGLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVK 282
Query: 376 VLSRI 380
LS +
Sbjct: 283 ELSEL 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
R+ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 160/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K+ N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 6 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 65
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 66 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 125
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNV 182
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 183 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 242
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 243 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 290
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N++
Sbjct: 291 PTFKQLVEDLDRILTLTTNQE 311
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 8 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 67
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 68 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 127
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 184
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 185 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 244
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 245 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 292
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 293 PTFKQLVEDLDRILTLTTNEE 313
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 65 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 124
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 241
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 301
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 302 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 349
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 350 PTFKQLVEDLDRILTLTTNEE 370
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 11 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 70
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 71 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 130
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 187
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 188 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 247
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 248 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 295
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 296 PTFKQLVEDLDRILTLTTNEE 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++ L+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N+++L+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
YD N P +T+ V +ARG+EYL A IHRD+ + N+L+ ++
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVL++E+
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 256 GGSPYPGI-PVEELFKLLKEG---------HRMDKPANCT--NELYMMMRDCWHAVPSQR 303
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RIL + N +
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 163/322 (50%), Gaps = 43/322 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 132 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 188
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 249 GGSPYPGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQR 296
Query: 368 PSMRDIVQVLSRILKMRHNRKH 389
P+ + +V+ L RI+ + N+++
Sbjct: 297 PTFKQLVEDLDRIVALTSNQEY 318
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 5 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 64
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 65 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 124
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 125 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 181
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 242 GGSPYPGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQR 289
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RI+ + N++
Sbjct: 290 PTFKQLVEDLDRIVALTSNQE 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 4 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 63
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 64 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 123
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 124 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 180
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 241 GGSPYPGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQR 288
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RI+ + N++
Sbjct: 289 PTFKQLVEDLDRIVALTSNQE 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 188
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 249 GGSPYPGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQR 296
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RI+ + N++
Sbjct: 297 PTFKQLVEDLDRIVALTSNQE 317
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 188
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 249 GGSPYPGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQR 296
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RI+ + N++
Sbjct: 297 PTFKQLVEDLDRIVALTSNQE 317
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 53 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 112
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 113 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 172
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 229
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 290 GGSPYPGV-PVEELFKLLKEGH---------RMDKPSNCT--NELYMMMRDCWHAVPSQR 337
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RI+ + N++
Sbjct: 338 PTFKQLVEDLDRIVALTSNQE 358
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 43/321 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE +L + +G+GAFG V A+ + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMR 251
++ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ +
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV 188
Query: 252 ARVADFGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA- 307
++ADFGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 308 GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKR 367
G SP G+ EL + EG R+D + NE+ + C + P +R
Sbjct: 249 GGSPYPGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQR 296
Query: 368 PSMRDIVQVLSRILKMRHNRK 388
P+ + +V+ L RI+ + N++
Sbjct: 297 PTFKQLVEDLDRIVALTSNQE 317
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 43/316 (13%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATDSKQGE 152
+PE +L + +G+GAFG V A+ + VAVK+L +D+ + +
Sbjct: 6 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 65
Query: 153 -KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
+ +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 66 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 125
Query: 200 YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVAD 256
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ + ++AD
Sbjct: 126 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 182
Query: 257 FGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPL 312
FGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+ G SP
Sbjct: 183 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
Query: 313 QGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRD 372
G+ EL + EG R+D + NE+ + C + P +RP+ +
Sbjct: 243 PGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQ 290
Query: 373 IVQVLSRILKMRHNRK 388
+V+ L RI+ + N++
Sbjct: 291 LVEDLDRIVALTSNQE 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 43/316 (13%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATDSKQGE 152
+PE +L + +G+GAFG V A+ + VAVK+L +D+ + +
Sbjct: 2 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 61
Query: 153 -KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
+ +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
Query: 200 YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVAD 256
Y+ ++ P L+ V A VARG+EYL A IHRD+ + N+L+ + ++AD
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 178
Query: 257 FGLSRE-EMVD--KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPL 312
FGL+R+ +D K N R ++ PE + R +T +SDV+SFGVLL+E+ G SP
Sbjct: 179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 313 QGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRD 372
G+ EL + EG R+D + NE+ + C + P +RP+ +
Sbjct: 239 PGV-PVEELFKLLKEG---------HRMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQ 286
Query: 373 IVQVLSRILKMRHNRK 388
+V+ L RI+ + N++
Sbjct: 287 LVEDLDRIVALTSNQE 302
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF-- 276
++ +EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F
Sbjct: 120 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWE 333
+ PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--------- 227
Query: 334 EIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKS 393
D R++ E +V L C P RPS +I Q + +
Sbjct: 228 ---DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ----------- 271
Query: 394 QSTTADEVSIDM 405
+S+ +DEV ++
Sbjct: 272 ESSISDEVEKEL 283
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF-- 276
++ +EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F
Sbjct: 120 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWE 333
+ PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--------- 227
Query: 334 EIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKS 393
D R++ E +V L C P RPS +I Q + +
Sbjct: 228 ---DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ----------- 271
Query: 394 QSTTADEVSIDM 405
+S+ +DEV ++
Sbjct: 272 ESSISDEVEKEL 283
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 148
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 258
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 259 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 294
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF-- 276
++ +EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F
Sbjct: 120 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWE 333
+ PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--------- 227
Query: 334 EIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKS 393
D R++ E +V L C P RPS +I Q + +
Sbjct: 228 ---DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ----------- 271
Query: 394 QSTTADEVSIDM 405
+S+ +DEV ++
Sbjct: 272 ESSISDEVEKEL 283
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF-- 276
++ +EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F
Sbjct: 120 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWE 333
+ PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--------- 227
Query: 334 EIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKS 393
D R++ E +V L C P RPS +I Q + +
Sbjct: 228 ---DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ----------- 271
Query: 394 QSTTADEVSIDM 405
+S+ +DEV ++
Sbjct: 272 ESSISDEVEKEL 283
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 139/268 (51%), Gaps = 23/268 (8%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
++G+GAFG V KA+ + VA+K + ++S++ K F E+ L R++H N+V L G C
Sbjct: 16 VVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH---IALDVARGLEYLHDGAVPPVI 235
LV + GSL + L+ PL + H L ++G+ YLH +I
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 236 HRDIKSSNILLDQSMRA-RVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSD 294
HRD+K N+LL ++ DFG + + + H N +G+ ++ PE N+++K D
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVAS 354
V+S+G++L+E+I R P + + W +R I ++ + + S
Sbjct: 187 VFSWGIILWEVITRRKPFDEI--------GGPAFRIMWAVHNGTRPPLIKNLPK--PIES 236
Query: 355 LAYKCVNRAPRKRPSMRDIVQVLSRILK 382
L +C ++ P +RPSM +IV++++ +++
Sbjct: 237 LMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 139/268 (51%), Gaps = 23/268 (8%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
++G+GAFG V KA+ + VA+K + ++S++ K F E+ L R++H N+V L G C
Sbjct: 15 VVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH---IALDVARGLEYLHDGAVPPVI 235
LV + GSL + L+ PL + H L ++G+ YLH +I
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 236 HRDIKSSNILLDQSMRA-RVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSD 294
HRD+K N+LL ++ DFG + + + H N +G+ ++ PE N+++K D
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVAS 354
V+S+G++L+E+I R P + + W +R I ++ + + S
Sbjct: 186 VFSWGIILWEVITRRKPFDEI--------GGPAFRIMWAVHNGTRPPLIKNLPK--PIES 235
Query: 355 LAYKCVNRAPRKRPSMRDIVQVLSRILK 382
L +C ++ P +RPSM +IV++++ +++
Sbjct: 236 LMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 35/312 (11%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 14 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 72
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF-- 276
++ +EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F
Sbjct: 133 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWE 333
+ PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--------- 240
Query: 334 EIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKS 393
D R++ E +V L C P RPS +I Q + +
Sbjct: 241 ---DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ----------- 284
Query: 394 QSTTADEVSIDM 405
+S+ +DEV ++
Sbjct: 285 ESSISDEVEKEL 296
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 149
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 259
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 260 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 232
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 233 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 278
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 279 SISDEVEKEL 288
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 35/299 (11%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
Y L F +IG+G FG V KA++ + ++ SK ++F E+ +
Sbjct: 19 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------------ASHLYDENYGP 206
L +L HH N++NL+G C +G L + G+L A + +
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
L+ +H A DVARG++YL IHRD+ + NIL+ ++ A++ADFGLSR + V
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVY 195
Query: 267 KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMN 325
R ++ E ++ +T SDV+S+GVLL+E+++ G +P G M EL
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKL 254
Query: 326 TEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
+G RL+ + ++ EV L +C P +RPS I+ L+R+L+ R
Sbjct: 255 PQG---------YRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 144
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 254
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 255 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 290
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 147
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 257
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 258 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 168
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 278
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 279 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 314
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 141
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 251
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 252 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 167
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 277
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 278 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 313
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 35/299 (11%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
Y L F +IG+G FG V KA++ + ++ SK ++F E+ +
Sbjct: 9 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------------ASHLYDENYGP 206
L +L HH N++NL+G C +G L + G+L A + +
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
L+ +H A DVARG++YL IHRD+ + NIL+ ++ A++ADFGLSR + V
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVY 185
Query: 267 KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMN 325
R ++ E ++ +T SDV+S+GVLL+E+++ G +P G M EL
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKL 244
Query: 326 TEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
+G RL+ + ++ EV L +C P +RPS I+ L+R+L+ R
Sbjct: 245 PQG---------YRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 292
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 149
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 259
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 260 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 148
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 258
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 259 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL-- 146
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 256
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 257 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 292
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 150
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M+DK ++ G ++ E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 260
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 261 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 232
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 233 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 278
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 279 SISDEVEKEL 288
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 210 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 268
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHR++ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 329 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 434
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 435 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 480
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 481 SISDEVEKEL 490
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 229
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 230 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 275
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 276 SISDEVEKEL 285
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 229
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 230 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 275
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 276 SISDEVEKEL 285
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 24/287 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 232
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D R++ E +V L C P RPS +I Q + +
Sbjct: 233 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 24/287 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 232
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D R++ E +V L C P RPS +I Q + +
Sbjct: 233 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 150
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 260
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 261 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 249 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 307
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHR++ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 368 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 473
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 474 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 519
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 520 SISDEVEKEL 529
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 207 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 265
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHR++ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 326 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 431
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 432 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 477
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 478 SISDEVEKEL 487
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 154
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 264
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 265 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 300
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 149
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 259
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 260 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 24/287 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 65
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 126 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 231
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D R++ E +V L C P RPS +I Q + +
Sbjct: 232 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 147
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 257
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 258 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 149
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 259
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 260 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 170 LVNLVGYCA-EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL-- 208
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG------YLDPE 282
A +HRD+ + N +LD+ +VADFGL+R+ M DK ++ G ++ E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ T+ FT KSDV+SFGVLL+EL+ +P + ++ +G+ L
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQP 318
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ + L EV KC + RPS ++V +S I
Sbjct: 319 EYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAIF 354
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A F +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 229
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 230 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 275
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 276 SISDEVEKEL 285
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D A+ F +
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 228
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 229 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 274
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 275 SISDEVEKEL 284
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 35/310 (11%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A F +
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 228
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
D R++ E +V L C P RPS +I Q + + +S
Sbjct: 229 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ES 274
Query: 396 TTADEVSIDM 405
+ +DEV ++
Sbjct: 275 SISDEVEKEL 284
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 24/287 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 227
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D R++ E +V L C P RPS +I Q + +
Sbjct: 228 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 35/299 (11%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
Y L F +IG+G FG V KA++ + ++ SK ++F E+ +
Sbjct: 16 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------------ASHLYDENYGP 206
L +L HH N++NL+G C +G L + G+L A + +
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
L+ +H A DVARG++YL IHR++ + NIL+ ++ A++ADFGLSR + V
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQEVY 192
Query: 267 KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMN 325
R ++ E ++ +T SDV+S+GVLL+E+++ G +P G M EL
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKL 251
Query: 326 TEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
+G RL+ + ++ EV L +C P +RPS I+ L+R+L+ R
Sbjct: 252 PQG---------YRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 299
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 24/286 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D + A+ F +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 227
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
D R++ E +V L C P RPS +I Q +
Sbjct: 228 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 24/287 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GY 278
+EYL IHRD+ + N L+ ++ +VADFGLSR D A+ F +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQG--LMEYVELAAMNTEGKTGWEEI 335
PE ++ F+ KSDV++FGVLL+E+ G SP G L + EL
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----------- 232
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D R++ E +V L C P RPS +I Q + +
Sbjct: 233 -DYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 35/292 (11%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G G FG VY+ TVAVK L D+ + E EF E ++ + H NLV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ FM+ G+L +L + N ++ + +++A ++ +EYL IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVY 296
+ + N L+ ++ +VADFGLSR D A+ F + PE ++ F+ KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 297 SFGVLLFELIA-GRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVA 353
+FGVLL+E+ G SP G+ + EL D R++ E +V
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEK------------DYRMERPEGCPE--KVY 240
Query: 354 SLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTADEVSIDM 405
L C P RPS +I Q + + +S+ +DEV ++
Sbjct: 241 ELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ESSISDEVEKEL 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 35/275 (12%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F IG G FG V+ + VA+K + + E++F E ++ +L H LV L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E+ LV+ FM G L+ +L + G + + LDV G+ YL + V
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKK 292
IHRD+ + N L+ ++ +V+DFG++R + D++ ++ F + PE S ++ K
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 293 SDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWE-----EIVDSRLDGIFDVE 347
SDV+SFGVL++E+ +EGK +E E+V+ G F +
Sbjct: 188 SDVWSFGVLMWEVF-------------------SEGKIPYENRSNSEVVEDISTG-FRLY 227
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+ ++ Y+ +N R+RP R SR+L+
Sbjct: 228 KPRLASTHVYQIMNHCWRERPEDRP---AFSRLLR 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 120 IGQGAFGPVYKAQMST------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S+ ++FQ E LL L H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
G C E ++V+ +M G L L D GPL + +A VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG-- 277
G+ YL A +HRD+ + N L+ Q + ++ DFG+SR+ D + R
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVD 337
++ PE I R FT +SDV+SFGV+L+E+ T GK W ++ +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIF-------------------TYGKQPWYQLSN 237
Query: 338 SR-LDGIFDVEELN-------EVASLAYKCVNRAPRKRPSMRDI 373
+ +D I EL EV ++ C R P++R S++D+
Sbjct: 238 TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 120 IGQGAFGPVYKAQMST------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S+ ++FQ E LL L H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
G C E ++V+ +M G L L D GPL + +A VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG-- 277
G+ YL A +HRD+ + N L+ Q + ++ DFG+SR+ D + R
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVD 337
++ PE I R FT +SDV+SFGV+L+E+ T GK W ++ +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIF-------------------TYGKQPWYQLSN 243
Query: 338 SR-LDGIFDVEELN-------EVASLAYKCVNRAPRKRPSMRDI 373
+ +D I EL EV ++ C R P++R S++D+
Sbjct: 244 TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 120 IGQGAFGPVYKAQMST------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S+ ++FQ E LL L H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
G C E ++V+ +M G L L D GPL + +A VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG-- 277
G+ YL A +HRD+ + N L+ Q + ++ DFG+SR+ D + R
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVD 337
++ PE I R FT +SDV+SFGV+L+E+ T GK W ++ +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIF-------------------TYGKQPWYQLSN 266
Query: 338 SR-LDGIFDVEELN-------EVASLAYKCVNRAPRKRPSMRDI 373
+ +D I EL EV ++ C R P++R S++D+
Sbjct: 267 TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 145/289 (50%), Gaps = 41/289 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDEN-----YGP-------LTWNLRVHIALD 218
NL+G C + G ++V V F G+L+++L + Y P LT + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIRGT 275
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 276 FGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEE 334
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG------ 267
Query: 335 IVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 268 ---TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F IG G FG V+ + VA+K + + E++F E ++ +L H LV L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E+ LV+ FM G L+ +L + G + + LDV G+ YL + + V
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAS---V 124
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKK 292
IHRD+ + N L+ ++ +V+DFG++R + D++ ++ F + PE S ++ K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SDV+SFGVL++E+ + G+ P +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F IG G FG V+ + VA+K + + E++F E ++ +L H LV L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E+ LV+ FM G L+ +L + G + + LDV G+ YL + V
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKK 292
IHRD+ + N L+ ++ +V+DFG++R + D++ ++ F + PE S ++ K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SDV+SFGVL++E+ + G+ P +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F IG G FG V+ + VA+K + + E++F E ++ +L H LV L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E+ LV+ FM G L+ +L + G + + LDV G+ YL + V
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKK 292
IHRD+ + N L+ ++ +V+DFG++R + D++ ++ F + PE S ++ K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SDV+SFGVL++E+ + G+ P +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 39/292 (13%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-H 166
N +G+GAFG V +A + +T TVAVK+L + E + +E+ +L + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 167 HRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHL---------YDENYGP-LTWNLRVHI 215
H N+VNL+G C + G ++V V F G+L+++L Y + Y LT +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 216 ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANI 272
+ VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 273 RGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTG 331
R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG--- 263
Query: 332 WEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 264 ------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F IG G FG V+ + VA+K + S E +F E ++ +L H LV L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E+ LV+ FM G L+ +L + G + + LDV G+ YL + V
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKK 292
IHRD+ + N L+ ++ +V+DFG++R + D++ ++ F + PE S ++ K
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SDV+SFGVL++E+ + G+ P +
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 35/292 (11%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G G +G VY+ TVAVK L D+ + E EF E ++ + H NLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ FM+ G+L +L + N ++ + +++A ++ +EYL IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVY 296
+ + N L+ ++ +VADFGLSR D A+ F + PE ++ F+ KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 297 SFGVLLFELIA-GRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVA 353
+FGVLL+E+ G SP G+ + EL D R++ E +V
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEK------------DYRMERPEGCPE--KVY 240
Query: 354 SLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTADEVSIDM 405
L C P RPS +I Q + + +S+ +DEV ++
Sbjct: 241 ELMRACWQWNPSDRPSFAEIHQAFETMFQ-----------ESSISDEVEKEL 281
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 39/292 (13%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-H 166
N +G+GAFG V +A + +T TVAVK+L + E + +E+ +L + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 167 HRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHL---------YDENYGP-LTWNLRVHI 215
H N+VNL+G C + G ++V V F G+L+++L Y + Y LT +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 216 ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANI 272
+ VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 273 RGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTG 331
R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEG--- 263
Query: 332 WEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 264 ------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 146/295 (49%), Gaps = 42/295 (14%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-H 166
N +G+GAFG V +A + +T TVAVK+L + E + +E+ +L + H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 167 HRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP-----------LTWNLR 212
H N+VNL+G C + G ++V V F G+L+++L + + P LT
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HA 269
+ + VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 270 ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEG 328
+ R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 329 KTGWEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 268 ---------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 24/269 (8%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G G +G VY+ TVAVK L D+ + E EF E ++ + H NLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ FM+ G+L +L + N ++ + +++A ++ +EYL IHRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVY 296
+ + N L+ ++ +VADFGLSR D A+ F + PE ++ F+ KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 297 SFGVLLFELIA-GRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVA 353
+FGVLL+E+ G SP G+ + EL D R++ E +V
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEK------------DYRMERPEGCPE--KVY 240
Query: 354 SLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
L C P RPS +I Q + +
Sbjct: 241 ELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 35/275 (12%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F IG G FG V+ + VA+K + + E++F E ++ +L H LV L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E+ LV FM G L+ +L + G + + LDV G+ YL + V
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKK 292
IHRD+ + N L+ ++ +V+DFG++R + D++ ++ F + PE S ++ K
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 293 SDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWE-----EIVDSRLDGIFDVE 347
SDV+SFGVL++E+ +EGK +E E+V+ G F +
Sbjct: 186 SDVWSFGVLMWEVF-------------------SEGKIPYENRSNSEVVEDISTG-FRLY 225
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+ ++ Y+ +N R+RP R SR+L+
Sbjct: 226 KPRLASTHVYQIMNHCWRERPEDRP---AFSRLLR 257
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 38/297 (12%)
Query: 108 DLQKATCNFTT-----------LIGQGAFGPVYKAQMSTGE-----TVAVKVLATDSKQG 151
D +A FTT +IG G FG VYK + T VA+K L +
Sbjct: 29 DPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK 88
Query: 152 EK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
++ +F E ++G+ H N++ L G ++ M++ +M G+L L +++ G +
Sbjct: 89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVL 147
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA 270
V + +A G++YL + +HRD+ + NIL++ ++ +V+DFGLSR D A
Sbjct: 148 QLVGMLRGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 271 NI----RGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMN 325
+ + PE IS R FT SDV+SFG++++E++ G P L + + A+N
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 264
Query: 326 TEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + + L +C + +RP DIV +L ++++
Sbjct: 265 D----------GFRLPTPMDCP--SAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 258
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 259 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 267
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 268 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 269
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 270 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 312
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 267
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 268 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 267
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 268 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 304
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 305 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 347
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 107/206 (51%), Gaps = 28/206 (13%)
Query: 121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
+G FG V+KAQ+ E VAVK+ KQ + + EV L + H N++ +G AEK
Sbjct: 33 ARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIG--AEK 88
Query: 181 G------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH------- 227
L+ F KGSL+ L ++WN HIA +ARGL YLH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG---YLDPEYI 284
DG P + HRDIKS N+LL ++ A +ADFGL+ + K A + G G Y+ PE +
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 285 -STRNFTKKS----DVYSFGVLLFEL 305
NF + + D+Y+ G++L+EL
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 258
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 259 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 258
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 259 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ F+ GSL +L R+ HI L + +G
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 243
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 244 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G G +G VY TVAVK L D+ + E EF E ++ + H NLV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ +V +M G+L +L + N +T + +++A ++ +EYL IHRD
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRD 155
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVY 296
+ + N L+ ++ +VADFGLSR D + A+ F + PE ++ F+ KSDV+
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 297 SFGVLLFELIA-GRSPLQGL 315
+FGVLL+E+ G SP G+
Sbjct: 216 AFGVLLWEIATYGMSPYPGI 235
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 43/291 (14%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIR 273
VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D + R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 274 GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGW 332
++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E EG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---- 258
Query: 333 EEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+R+ + E+ + C + P +RP+ ++V+ L +L+
Sbjct: 259 -----TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
KG +V +M+KGSL +L L + + +LDV +EYL +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRD 314
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSF 298
+ + N+L+ + A+V+DFGL++E + + + PE + + F+ KSDV+SF
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSF 372
Query: 299 GVLLFELIA-GRSP 311
G+LL+E+ + GR P
Sbjct: 373 GILLWEIYSFGRVP 386
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
KG +V +M+KGSL +L L + + +LDV +EYL +HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRD 142
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSF 298
+ + N+L+ + A+V+DFGL++E + + + PE + + F+ KSDV+SF
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSF 200
Query: 299 GVLLFELIA-GRSP 311
G+LL+E+ + GR P
Sbjct: 201 GILLWEIYSFGRVP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
KG +V +M+KGSL +L L + + +LDV +EYL +HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRD 127
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSF 298
+ + N+L+ + A+V+DFGL++E + + + PE + + F+ KSDV+SF
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSF 185
Query: 299 GVLLFELIA-GRSP 311
G+LL+E+ + GR P
Sbjct: 186 GILLWEIYSFGRVP 199
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 240
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 241 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 243
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 244 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 124
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 125 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 238
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 239 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 131
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 132 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 245
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 246 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 133
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 134 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 247
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 248 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 125
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 126 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 239
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 240 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 132
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 133 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 246
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 247 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 240
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 241 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 144
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 258
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 259 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 157
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 158 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 271
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 272 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 144
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 258
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 259 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 130
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 131 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 244
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 245 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 39/282 (13%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L + K+FQ E LL L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 174 VGYCAEKGQHMLVYVFMSKGSL----------ASHLYD----ENYGPLTWNLRVHIALDV 219
G C + ++V+ +M G L A L D + G L + +HIA +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH---AANIRGTF 276
A G+ YL A +HRD+ + N L+ ++ ++ DFG+SR+ + +
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEI 335
++ PE I R FT +SDV+SFGV+L+E+ G+ P L E+ T+G+
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-TEVIECITQGRVLERPR 258
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVL 377
V + EV + C R P++R ++++I ++L
Sbjct: 259 VCPK-----------EVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 240
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 241 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHRD+ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 243
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 244 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
+L++ +G G FG V + VAVK++ S E EF E + +L H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV G C+++ +V ++S G L ++L G L + + + DV G+ +L
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLE 121
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
IHRD+ + N L+D+ + +V+DFG++R + D++ +++ F + PE
Sbjct: 122 SHQF---IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFH 178
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIF 344
++ KSDV++FG+L++E+ + G+ P L E+ ++G + + S D I+
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPYD-LYTNSEVVLKVSQGHRLYRPHLAS--DTIY 235
Query: 345 DVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKH 389
+ Y C + P KRP+ + Q+LS I +R KH
Sbjct: 236 QI---------MYSCWHELPEKRPTFQ---QLLSSIEPLREKDKH 268
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
KG +V +M+KGSL +L L + + +LDV +EYL +HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHRD 133
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSF 298
+ + N+L+ + A+V+DFGL++E + + + PE + F+ KSDV+SF
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSF 191
Query: 299 GVLLFELIA-GRSP 311
G+LL+E+ + GR P
Sbjct: 192 GILLWEIYSFGRVP 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 127/286 (44%), Gaps = 40/286 (13%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S K+F E LL L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-------------LTWNLRVHIALDVA 220
G C E ++V+ +M G L L +GP LT + +HIA +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH---AANIRGTFG 277
G+ YL A +HRD+ + N L+ +++ ++ DFG+SR+ + +
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
++ PE I R FT +SDV+S GV+L+E+ G+ P L E+ T+G+
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRT 254
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+ EV L C R P R +++ I +L + K
Sbjct: 255 CPQ-----------EVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 139/302 (46%), Gaps = 34/302 (11%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A G+ VAVK+L + +
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------Y 200
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 201 DENYG-PLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGL 259
D+ G PL +H + VA+G+ +L A IHRD+ + N+LL A++ DFGL
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 260 SREEMVDKH---AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
+R+ M D + N R ++ PE I +T +SDV+S+G+LL+E+ + G +P G+
Sbjct: 199 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 258
Query: 316 MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ + + +G + + + S+ C P RP+ + I
Sbjct: 259 LVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTFQQICS 307
Query: 376 VL 377
L
Sbjct: 308 FL 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 139/302 (46%), Gaps = 34/302 (11%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A G+ VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------Y 200
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 201 DENYG-PLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGL 259
D+ G PL +H + VA+G+ +L A IHRD+ + N+LL A++ DFGL
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 206
Query: 260 SREEMVDKH---AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
+R+ M D + N R ++ PE I +T +SDV+S+G+LL+E+ + G +P G+
Sbjct: 207 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 266
Query: 316 MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ + + +G + + + S+ C P RP+ + I
Sbjct: 267 LVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTFQQICS 315
Query: 376 VL 377
L
Sbjct: 316 FL 317
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMS-TGE---TVAVKVLATD-SKQGEKEFQTEVML 161
K+++ + +IG G FG V ++ G+ VA+K L +++ ++F E +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M+V +M GSL + L +N G T V + ++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISA 135
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 136 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++++E+++ G P Y E+ N + EE
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP------YWEMT--NQDVIKAVEE-- 242
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP +IV +L ++++
Sbjct: 243 GYRLPSPMDCPA--ALYQLMLDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 156
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 157 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 264
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 265 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 307
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 127
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGY 278
+EYL IHR++ + NIL++ R ++ DFGL++ DK ++ +
Sbjct: 128 MEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA----GRSPLQGLMEYVELAAMNTEGKTGWEE 334
PE ++ F+ SDV+SFGV+L+EL +SP E++ + + +G+
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFH 241
Query: 335 IVD--------SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
+++ R DG D E+ + +C N +RPS RD+ + +I
Sbjct: 242 LIELLKNNGRLPRPDGCPD-----EIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 146
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 147 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 254
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 255 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 130 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 237
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 238 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 40/308 (12%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A G+ VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------- 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL 149
Query: 200 ---YDENYGP---LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRAR 253
Y+ ++ P L+ +H + VA+G+ +L A IHRD+ + N+LL A+
Sbjct: 150 EYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 206
Query: 254 VADFGLSREEMVDKH---AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GR 309
+ DFGL+R+ M D + N R ++ PE I +T +SDV+S+G+LL+E+ + G
Sbjct: 207 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 310 SPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPS 369
+P G++ + + +G + + + S+ C P RP+
Sbjct: 267 NPYPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPT 315
Query: 370 MRDIVQVL 377
+ I L
Sbjct: 316 FQQICSFL 323
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE--KEFQTEVMLLG 163
Y +++ + +T IG G+FG VYK + VAVK+L E + F+ EV +L
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
+ H N++ +GY K +V + SL HL+ + + L + IA A+G+
Sbjct: 88 KTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGM 145
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLD 280
+YLH +IHRD+KS+NI L + + ++ DFGL+ + + + G+ ++
Sbjct: 146 DYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 281 PEYISTRN---FTKKSDVYSFGVLLFELIAGRSP 311
PE I ++ F+ +SDVYS+G++L+EL+ G P
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 103 EYSYK---DLQKATCNFTTLIGQGAFGPVYKAQM----STGET--VAVKVLATDSKQGEK 153
EY Y + + F ++G GAFG V A TG + VAVK+L + E+
Sbjct: 33 EYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER 92
Query: 154 E-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY----------- 200
E +E+ ++ +L H N+VNL+G C G L++ + G L ++L
Sbjct: 93 EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 201 ----------DENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSM 250
+E+ LT+ + A VA+G+E+L +HRD+ + N+L+
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGK 209
Query: 251 RARVADFGLSREEMVDKHAA---NIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
++ DFGL+R+ M D + N R ++ PE + +T KSDV+S+G+LL+E+ +
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
Query: 308 -GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRK 366
G +P G+ + G ++D F E E+ + C RK
Sbjct: 270 LGVNPYPGIPVDANFYKLIQNG---------FKMDQPFYATE--EIYIIMQSCWAFDSRK 318
Query: 367 RPSMRDIVQVL 377
RPS ++ L
Sbjct: 319 RPSFPNLTSFL 329
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 28/287 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD-GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TF 276
G++YL D GAV HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGAV----HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEI 335
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG------- 266
Query: 336 VDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 --YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 139/314 (44%), Gaps = 43/314 (13%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVK----VLA 145
K+S VV +P+ + L IG+G FG V+ ++ T VAVK L
Sbjct: 94 KKSGVVLHRAVPKDKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP 152
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
D K +F E +L + H N+V L+G C +K +V + G + L E
Sbjct: 153 PDLK---AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA- 208
Query: 206 PLTWNLRVHIAL----DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR 261
LRV L D A G+EYL IHRD+ + N L+ + +++DFG+SR
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 262 EEMVDKHAAN--IRGT-FGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLME 317
EE +AA+ +R + PE ++ ++ +SDV+SFG+LL+E + G SP L
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 318 YVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVL 377
+ G+ E+ D +F + E +C P +RPS I Q L
Sbjct: 322 QQTREFVEKGGRLPCPELCP---DAVFRLME---------QCWAYEPGQRPSFSTIYQEL 369
Query: 378 SRILKMRHNRKHHR 391
I RK HR
Sbjct: 370 QSI------RKRHR 377
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGL+R D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 15/217 (6%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
IG G+FG VYK + VAVK+L + Q + F+ EV +L + H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
+ K Q +V + SL HL+ + IA ARG++YLH ++ IHR
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSI---IHR 144
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMV---DKHAANIRGTFGYLDPEYISTRN---FTK 291
D+KS+NI L + ++ DFGL+ E+ + G+ ++ PE I ++ ++
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEG 328
+SDVY+FG++L+EL+ G+ P + ++ M G
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 334 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 389
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 450 FGILLTELTTKGRVPYPGMV 469
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 78 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 133
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 194 FGILLTELTTKGRVPYPGMV 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 251 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 367 FGILLTELTTKGRVPYPGMV 386
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 251 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 367 FGILLTELTTKGRVPYPGMV 386
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGL R D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 159 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 266
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 267 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V M GSL S L + T V + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D AA RG
Sbjct: 130 GMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++L+E+++ G P + + A++ EG
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EG-------- 237
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 238 -YRLPPPMDCPA--ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 251 EPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 367 FGILLTELTTKGRVPYPGMV 386
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 137/314 (43%), Gaps = 43/314 (13%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVK----VLA 145
K+S VV +P+ + L IG+G FG V+ ++ T VAVK L
Sbjct: 94 KKSGVVLHRAVPKDKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP 152
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
D K +F E +L + H N+V L+G C +K +V + G + L E
Sbjct: 153 PDLK---AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA- 208
Query: 206 PLTWNLRVHIAL----DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR 261
LRV L D A G+EYL IHRD+ + N L+ + +++DFG+SR
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 262 EEM--VDKHAANIRGT-FGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLME 317
EE V + +R + PE ++ ++ +SDV+SFG+LL+E + G SP L
Sbjct: 262 EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 318 YVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVL 377
+ G+ E+ D +F + E +C P +RPS I Q L
Sbjct: 322 QQTREFVEKGGRLPCPELCP---DAVFRLME---------QCWAYEPGQRPSFSTIYQEL 369
Query: 378 SRILKMRHNRKHHR 391
I RK HR
Sbjct: 370 QSI------RKRHR 377
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ ++++ +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 76 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 131
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 192 FGILLTELTTKGRVPYPGMV 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 28/288 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V + VA+K L + +++ ++F +E +
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ FM GSL S L +N G T V + +A
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 146
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG---- 277
G++YL D +HRD+ + NIL++ ++ +V+DFGLSR D G
Sbjct: 147 GMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 278 --YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEE 334
+ PE I R FT SDV+S+G++++E+++ G P + + A+
Sbjct: 204 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-------- 255
Query: 335 IVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D RL D + + L C + RP IV L ++++
Sbjct: 256 --DYRLPPPMDCP--SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 299
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 74 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 129
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 190 FGILLTELTTKGRVPYPGMV 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 73 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R +++ A F + PE I+
Sbjct: 132 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 188
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 189 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 77
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 78 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R +++ A F + PE I+
Sbjct: 137 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 193
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 194 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 224
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 73
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 74 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R +++ A F + PE I+
Sbjct: 133 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 189
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 78
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ + IA ARG++YLH + +IHRD+
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 134
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 294 DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEG 328
DVY+FG++L+EL+ G+ P + ++ M G
Sbjct: 195 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 94
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 150
Query: 240 KSSNILLDQSMRARVADFGLSREEMV---DKHAANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ E+ + G+ ++ PE I ++ ++ +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 211 DVYAFGIVLYELMTGQLP 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R +++ A F + PE I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ + VAVK L + + F E L+ L H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L + ++ +M+KGSL L + G + + + +A G+ Y+
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
IHRD++++N+L+ +S+ ++ADFGL+R +++ A F + PE I+
Sbjct: 128 RKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 184
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQG 314
FT KSDV+SFG+LL+E++ G+ P G
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPG 214
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 158
Query: 240 KSSNILLDQSMRARVADFGLSREEMV---DKHAANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ E+ + G+ ++ PE I ++ ++ +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 130
Query: 240 KSSNILLDQSMRARVADFGLSREEMV---DKHAANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ E+ + G+ ++ PE I ++ ++ +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ ++++ +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIYIVIE-YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSR----EEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+++NIL+ +++ +VADFGL+R E + A + PE FT KSDV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDV 198
Query: 296 YSFGVLLFELIA-GRSPLQGLM 316
+SFG+LL EL GR P G++
Sbjct: 199 WSFGILLTELTTKGRVPYPGMV 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 29/283 (10%)
Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V + +TGE VAVK L +S + + E+ +L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C E G + L+ F+ GSL +L +N + ++ A+ + +G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQY 147
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRG-----TFGYLDPEYIST 286
+HRD+ + N+L++ + ++ DFGL++ DK ++ F Y PE +
Sbjct: 148 ---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQ 203
Query: 287 RNFTKKSDVYSFGVLLFELI----AGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
F SDV+SFGV L EL+ + SP+ ++ + T G+ +V++ +G
Sbjct: 204 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIG----PTHGQMTVTRLVNTLKEG 259
Query: 343 ---IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+EV L KC P R S +++++ +LK
Sbjct: 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 7/210 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ + VAVK L + + F E L+ L H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 66
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ ++ FM+KGSL L + G + + + +A G+ Y+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
IHRD++++N+L+ +S+ ++ADFGL+R +++ A F + PE I+
Sbjct: 127 RKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQG 314
FT KS+V+SFG+LL+E++ G+ P G
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYPG 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 63 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R +++ A F + PE I+
Sbjct: 122 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 178
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 179 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 75 E-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 130
Query: 240 KSSNILLDQSMRARVADFGLSR----EEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+++NIL+ +++ +VADFGL+R E + A + PE FT KSDV
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDV 188
Query: 296 YSFGVLLFELIA-GRSPLQGLM 316
+SFG+LL EL GR P G++
Sbjct: 189 WSFGILLTELTTKGRVPYPGMV 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 120 IGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
IG+GAFG V++A+ VAVK+L + S + +FQ E L+ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL----------------------YDENYGPLTWN 210
L+G CA L++ +M+ G L L PL+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHA 269
++ IA VA G+ YL + +HRD+ + N L+ ++M ++ADFGLSR D +
Sbjct: 175 EQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 270 A--NIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTE 327
A N ++ PE I +T +SDV+++GV+L+E+ + GL Y +A
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS-----YGLQPYYGMAH---- 282
Query: 328 GKTGWEEIVDSRLDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
EE++ DG N E+ +L C ++ P RPS I ++L R+ +
Sbjct: 283 -----EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 252 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 307
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL R +++ A F + PE FT KSDV+S
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 368 FGILLTELTTKGRVPYPGMV 387
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 29/283 (10%)
Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V + +TGE VAVK L +S + + E+ +L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C E G + L+ F+ GSL +L +N + ++ A+ + +G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQY 135
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRG-----TFGYLDPEYIST 286
+HRD+ + N+L++ + ++ DFGL++ DK ++ F Y PE +
Sbjct: 136 ---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQ 191
Query: 287 RNFTKKSDVYSFGVLLFELI----AGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
F SDV+SFGV L EL+ + SP+ ++ + T G+ +V++ +G
Sbjct: 192 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIG----PTHGQMTVTRLVNTLKEG 247
Query: 343 ---IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+EV L KC P R S +++++ +LK
Sbjct: 248 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 290
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
Q +V + SL HL+ + IA ARG++YLH ++ IHRD+
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSI---IHRDL 146
Query: 240 KSSNILLDQSMRARVADFGLSREEMV---DKHAANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + ++ DFGL+ E+ + G+ ++ PE I ++ ++ +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 207 DVYAFGIVLYELMTGQLP 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ ++ H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 39/248 (15%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ +L+H+N+V +G + ++ M+ G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQS 249
L S L + P L +H+A D+A G +YL + IHRDI + N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 177
Query: 250 MRARVA---DFGLSREEMVDKHAANIRGTFG-------YLDPEYISTRNFTKKSDVYSFG 299
RVA DFG++R D + A+ G ++ PE FT K+D +SFG
Sbjct: 178 GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 300 VLLFELIA 307
VLL+E+ +
Sbjct: 234 VLLWEIFS 241
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 73
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 74 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 133 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 189
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKGSL L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 75
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 76 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 135 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 191
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 222
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKG L L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 70 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 129 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 185
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 76
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 77 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 136 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 192
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 223
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 47/315 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A G+ VAVK+L + +
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------- 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 200 ------------YDENYG-PLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILL 246
D+ G PL +H + VA+G+ +L A IHRD+ + N+LL
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 191
Query: 247 DQSMRARVADFGLSREEMVDKH---AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLF 303
A++ DFGL+R+ M D + N R ++ PE I +T +SDV+S+G+LL+
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 304 ELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNR 362
E+ + G +P G++ + + +G + + + S+ C
Sbjct: 252 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWAL 300
Query: 363 APRKRPSMRDIVQVL 377
P RP+ + I L
Sbjct: 301 EPTHRPTFQQICSFL 315
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 68
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 69 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R ++ A F + PE I+
Sbjct: 128 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 184
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +M+KGSL L E L V ++ +A G+ Y+ +HRD+
Sbjct: 82 EPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 198 FGILLTELTTKGRVPYPGMV 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 119 LIGQGAFGPVYKA----QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
+IG+G FG VY Q A+K L+ ++ + E F E +L+ L+H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 174 VG-YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
+G +G ++ +M G L + P +L + L VARG+EYL +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQKF- 145
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI------RGTFGYLDPEYIST 286
+HRD+ + N +LD+S +VADFGL+R +++D+ ++ R + E + T
Sbjct: 146 --VHRDLAARNCMLDESFTVKVADFGLAR-DILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDV 346
FT KSDV+SFGVLL+EL+ +P ++ +L +G+ + + D ++ V
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP--EYCPDSLYQV 260
Query: 347 EELNEVASLAYKCVNRAPRKRPSMRDIV----QVLSRIL 381
+ +C P RP+ R +V Q++S +L
Sbjct: 261 MQ---------QCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +MSKG L L E L V +A +A G+ Y+ +HRD+
Sbjct: 85 EPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKKSDVYS 297
+++NIL+ +++ +VADFGL+R +++ A F + PE FT KSDV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 298 FGVLLFELIA-GRSPLQGLM 316
FG+LL EL GR P G++
Sbjct: 201 FGILLTELTTKGRVPYPGMV 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 144/310 (46%), Gaps = 42/310 (13%)
Query: 119 LIGQGAFGPVYKAQMSTGE----TVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G+G FG V +AQ+ + VAVK+L D + +EF E + H ++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 173 LVGYCAE---KGQ---HMLVYVFMSKGSLASHLYDENYGPLTWNLR----VHIALDVARG 222
LVG KG+ M++ FM G L + L G +NL V +D+A G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD---KHAANIRGTFGYL 279
+EYL IHRD+ + N +L + M VADFGLSR+ + + +L
Sbjct: 150 MEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 280 DPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDS 338
E ++ +T SDV++FGV ++E++ G++P G+ E E+ G +
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI-ENAEIYNYLIGG---------N 256
Query: 339 RLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTA 398
RL E + EV L Y+C + P++RPS + L IL H ST+
Sbjct: 257 RLKQ--PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG-------HLSVLSTSQ 307
Query: 399 DEVSIDMEQA 408
D + I++E+A
Sbjct: 308 DPLYINIERA 317
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 101
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 157
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 218 DVYAFGIVLYELMTGQLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 76
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 132
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 193 DVYAFGIVLYELMTGQLP 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 11/217 (5%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML 161
PE+ ++ + T +G G FG V+ + VAVK L S + F E L
Sbjct: 2 PEW---EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANL 57
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ +L H+ LV L ++ +++ +M GSL L + LT N + +A +A
Sbjct: 58 MKQLQHQRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YL 279
G+ ++ + IHR+++++NIL+ ++ ++ADFGL+R +++ A F +
Sbjct: 117 GMAFIEERNY---IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 173
Query: 280 DPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
PE I+ FT KSDV+SFG+LL E++ GR P G+
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 158
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 38/306 (12%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A G+ VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------- 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 200 YDENYGPLTWNLR----VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA 255
D + L +H + VA+G+ +L A IHRD+ + N+LL A++
Sbjct: 150 TDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 256 DFGLSREEMVDKH---AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSP 311
DFGL+R+ M D + N R ++ PE I +T +SDV+S+G+LL+E+ + G +P
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 312 LQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMR 371
G++ + + +G + + + S+ C P RP+ +
Sbjct: 267 YPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTFQ 315
Query: 372 DIVQVL 377
I L
Sbjct: 316 QICSFL 321
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 19/219 (8%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GETV A+K+L T + EF E +++
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
+ H +LV L+G C LV M G L ++++ +N G L ++ + +A
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QLLLNWCVQIA 150
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRG---TFG 277
+G+ YL + + +HRD+ + N+L+ ++ DFGL+R D+ N G
Sbjct: 151 KGMMYLEERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
++ E I R FT +SDV+S+GV ++EL+ G P G+
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 246
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 135
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVL-ATDSKQGEKEFQTEVML 161
K++ + +IG G FG V ++ VA+K L A + + ++F +E +
Sbjct: 24 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ +M GSL + L +N G T V + +
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 142
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D + +HRD+ + NIL++ ++ +V+DFG+SR D AA RG
Sbjct: 143 GMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
+ PE I+ R FT SDV+S+G++++E+++ G P + + A+ EG
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-EG-------- 250
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + RP IV +L ++++
Sbjct: 251 -YRLPPPMDCP--IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 293
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ + VA+K L + E F E ++ +L H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +M+KGSL L D L V +A VA G+ Y+
Sbjct: 64 DKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR----EEMVDKHAANIRGTFGYLDPEY 283
IHRD++S+NIL+ + ++ADFGL+R E + A + PE
Sbjct: 123 RMNY---IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF--PIKWTAPEA 177
Query: 284 ISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL EL+ GR P G+
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 135
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
K Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 130
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+GQG FG V+ + VA+K L + E F E ++ +L H LV L +E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ + +V +M+KGSL L E L V ++ +A G+ Y+ +HRD+
Sbjct: 82 EPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 240 KSSNILLDQSMRARVADFGLSR----EEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+++NIL+ +++ +VADFGL+R E + A + PE FT KSDV
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF--PIKWTAPEAALYGRFTIKSDV 195
Query: 296 YSFGVLLFELIA-GRSPLQGLM 316
+SFG+LL EL GR P G++
Sbjct: 196 WSFGILLTELTTKGRVPYPGMV 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 19/219 (8%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GETV A+K+L T + EF E +++
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
+ H +LV L+G C LV M G L ++++ +N G L ++ + +A
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QLLLNWCVQIA 127
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRG---TFG 277
+G+ YL + + +HRD+ + N+L+ ++ DFGL+R D+ N G
Sbjct: 128 KGMMYLEERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
++ E I R FT +SDV+S+GV ++EL+ G P G+
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 54/318 (16%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 27 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 86
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 87 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 146
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQS 249
L S L + P L +H+A D+A G +YL + IHRDI + N LL
Sbjct: 147 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCP 203
Query: 250 MRARVA---DFGLSREEMVDKHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVL 301
RVA DFG++R+ + + + +G ++ PE FT K+D +SFGVL
Sbjct: 204 GPGRVAKIGDFGMARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 261
Query: 302 LFELIAGRSPLQGLMEYVELAAMNTEGKTGWE--EIVDS--RLDGIFDVEELNEVASLAY 357
L+E+ + L M K+ E E V S R+D + V +
Sbjct: 262 LWEIFS-------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP--GPVYRIMT 306
Query: 358 KCVNRAPRKRPSMRDIVQ 375
+C P RP+ I++
Sbjct: 307 QCWQHQPEDRPNFAIILE 324
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ +L+H+N+V +G + ++ M+ G L S L + P L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 209
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ + +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 40/307 (13%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A G+ VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE----- 202
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L +
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 203 --------NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARV 254
N T +L +H + VA+G+ +L A IHRD+ + N+LL A++
Sbjct: 150 TDPAFAIANSTASTRDL-LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 205
Query: 255 ADFGLSREEMVDKH---AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRS 310
DFGL+R+ M D + N R ++ PE I +T +SDV+S+G+LL+E+ + G +
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 311 PLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSM 370
P G++ + + +G + + + S+ C P RP+
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTF 314
Query: 371 RDIVQVL 377
+ I L
Sbjct: 315 QQICSFL 321
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 30/288 (10%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVML 161
K+L + +IG G FG V ++ VA+K L +++ ++F E +
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+V+L G M+V FM G+L + L + G T V + +A
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQLVGMLRGIAA 156
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG---- 277
G+ YL D +HRD+ + NIL++ ++ +V+DFGLSR +++ + T G
Sbjct: 157 GMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSR--VIEDDPEAVYTTTGGKIP 211
Query: 278 --YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEE 334
+ PE I R FT SDV+S+G++++E+++ G P + + A+ EG
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-EG------ 264
Query: 335 IVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
RL D + L C + +RP IV +L ++++
Sbjct: 265 ---YRLPAPMDCPA--GLHQLMLDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 14/215 (6%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVL-ATDSKQGEKEFQTEVML 161
K++ + +IG G FG V ++ VA+K L A + + ++F +E +
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ +M GSL + L +N G T V + +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 127
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D + +HRD+ + NIL++ ++ +V+DFG+SR D AA RG
Sbjct: 128 GMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSP 311
+ PE I+ R FT SDV+S+G++++E+++ G P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQS 249
L S L + P L +H+A D+A G +YL + IHRDI + N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCP 177
Query: 250 MRARVA---DFGLSREEMVDKHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVL 301
RVA DFG++R+ + + + +G ++ PE FT K+D +SFGVL
Sbjct: 178 GPGRVAKIGDFGMARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 302 LFELIA 307
L+E+ +
Sbjct: 236 LWEIFS 241
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + +G + A+KVL AT + + E +L ++H +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L +G+ L+ F+ G L + L E +++ ++A ++A L++LH +
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLA-ELALALDHLHSLGI- 147
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K NILLD+ ++ DFGLS+E + +K A + GT Y+ PE ++ R T+
Sbjct: 148 --IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 292 KSDVYSFGVLLFELIAGRSPLQG 314
+D +SFGVL+FE++ G P QG
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQG 228
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 14/215 (6%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVL-ATDSKQGEKEFQTEVML 161
K++ + +IG G FG V ++ VA+K L A + + ++F +E +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ +M GSL + L +N G T V + +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 121
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRG---TFG 277
G++YL D + +HRD+ + NIL++ ++ +V+DFG+SR D AA RG
Sbjct: 122 GMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSP 311
+ PE I+ R FT SDV+S+G++++E+++ G P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 9/223 (4%)
Query: 94 NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK 153
N S +G+ Y ++ F +G G FG V + VA+K++ S E
Sbjct: 7 NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
EF E ++ L H LV L G C ++ ++ +M+ G L ++L + + T L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-L 123
Query: 214 HIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR 273
+ DV +EYL +HRD+ + N L++ +V+DFGLSR + D++ +++
Sbjct: 124 EMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 274 GTFG--YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQ 313
F + PE + F+ KSD+++FGVL++E+ + G+ P +
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 28/288 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V + VA+K L + +++ ++F +E +
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ FM GSL S L +N G T V + +A
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 120
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG---- 277
G++YL D +HR + + NIL++ ++ +V+DFGLSR D G
Sbjct: 121 GMKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 278 --YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEE 334
+ PE I R FT SDV+S+G++++E+++ G P + + A+
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-------- 229
Query: 335 IVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D RL D + + L C + RP IV L ++++
Sbjct: 230 --DYRLPPPMDCP--SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 273
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 7 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 67 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQS 249
L S L + P L +H+A D+A G +YL + IHRDI + N LL
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCP 183
Query: 250 MRARVA---DFGLSREEMVDKHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVL 301
RVA DFG++R+ + + + +G ++ PE FT K+D +SFGVL
Sbjct: 184 GPGRVAKIGDFGMARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 241
Query: 302 LFELIA 307
L+E+ +
Sbjct: 242 LWEIFS 247
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 119 LIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG-- 175
LIG G FG V+KA+ G+T +K + ++++ E+E V L +L H N+V+ G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGCW 73
Query: 176 ----YCAE---------KGQHMLVYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
Y E K + + + + F KG+L + L L + + + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
G++Y+H +I+RD+K SNI L + + ++ DFGL D +GT Y+ P
Sbjct: 134 GVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSP 190
Query: 282 EYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLD 341
E IS++++ K+ D+Y+ G++L EL+ + E + ++ D +
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELL-------------HVCDTAFETSKFFTDLRDGIIS 237
Query: 342 GIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLS 378
IFD +E +L K +++ P RP+ +I++ L+
Sbjct: 238 DIFDKKE----KTLLQKLLSKKPEDRPNTSEILRTLT 270
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + +G + A+KVL AT + + E +L ++H +V
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L +G+ L+ F+ G L + L E +++ ++A ++A L++LH +
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA-ELALALDHLHSLGI- 148
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K NILLD+ ++ DFGLS+E + +K A + GT Y+ PE ++ R T+
Sbjct: 149 --IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 206
Query: 292 KSDVYSFGVLLFELIAGRSPLQG 314
+D +SFGVL+FE++ G P QG
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQG 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + +G + A+KVL AT + + E +L ++H +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L +G+ L+ F+ G L + L E +++ ++A ++A L++LH +
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA-ELALALDHLHSLGI- 147
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K NILLD+ ++ DFGLS+E + +K A + GT Y+ PE ++ R T+
Sbjct: 148 --IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 292 KSDVYSFGVLLFELIAGRSPLQG 314
+D +SFGVL+FE++ G P QG
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQG 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 29/219 (13%)
Query: 111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
+ + + +G FG V+KAQ+ + VAVK+ KQ + + E+ + H NL
Sbjct: 14 RGSLQLLEIKARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENL 71
Query: 171 VNLVGYCAEK-GQHM-----LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
+ + AEK G ++ L+ F KGSL +L +TWN H+A ++RGL
Sbjct: 72 LQFIA--AEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLS 126
Query: 225 YLHD--------GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF 276
YLH+ G P + HRD KS N+LL + A +ADFGL+ K + G
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 277 G---YLDPEYIS-TRNFTKKS----DVYSFGVLLFELIA 307
G Y+ PE + NF + + D+Y+ G++L+EL++
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R D
Sbjct: 140 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR----D 192
Query: 267 KHAANIRGTFG-------YLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ A+ G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ A + VAVK + S E F E ++ L H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 242
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ +++ FM+KGSL L + + + +A G+ ++
Sbjct: 243 DKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF--GYLDPEYIS 285
IHRD++++NIL+ S+ ++ADFGL+R +++ A F + PE I+
Sbjct: 302 QRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIF 344
+FT KSDV+SFG+LL E++ GR P G+ + A+ + G+ R+
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL----ERGY------RMPRPE 408
Query: 345 DVEELNEVASLAYKCVNRAPRKRPSMRDIVQVL 377
+ E E+ ++ +C P +RP+ I VL
Sbjct: 409 NCPE--ELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 20/273 (7%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ A + VAVK + S E F E ++ L H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ +++ FM+KGSL L + + + +A G+ ++
Sbjct: 70 DKLVKLHAVVTKEPIYIITE-FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYIS 285
IHRD++++NIL+ S+ ++ADFGL+R +++ A F + PE I+
Sbjct: 129 QRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIF 344
+FT KSDV+SFG+LL E++ GR P G+ + A+ R+
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER----------GYRMPRPE 235
Query: 345 DVEELNEVASLAYKCVNRAPRKRPSMRDIVQVL 377
+ E E+ ++ +C P +RP+ I VL
Sbjct: 236 NCPE--ELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 140 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 194
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ + +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 157 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 211
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ + +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 212 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 94 NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK 153
N S +G+ Y ++ F +G G FG V + VA+K++ S E
Sbjct: 7 NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
EF E ++ L H LV L G C ++ ++ +M+ G L ++L + + T L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-L 123
Query: 214 HIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR 273
+ DV +EYL +HRD+ + N L++ +V+DFGLSR + D+ +++
Sbjct: 124 EMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 274 GTFG--YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQ 313
F + PE + F+ KSD+++FGVL++E+ + G+ P +
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLVG 175
+G G VY A+ + VA+K + ++ E K F+ EV +L H+N+V+++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
E + LV ++ +L+ ++ E++GPL+ + ++ + G+++ HD + +
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRI---V 133
Query: 236 HRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFGYLDPEYISTRNFTKKS 293
HRDIK NIL+D + ++ DFG+++ E ++ GT Y PE + +
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D+YS G++L+E++ G P G
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNG 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R D
Sbjct: 158 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR----D 210
Query: 267 KHAANIRGTFG-------YLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ A G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 211 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G G FG V + VA+K++ S E EF E ++ L H LV L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQF--- 121
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKK 292
+HRD+ + N L++ +V+DFGLSR + D++ +++ F + PE + F+ K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SD+++FGVL++E+ + G+ P +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYE 203
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 132 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 186
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ + +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 187 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
++G+G FG K TGE + +K L ++ ++ F EV ++ L H N++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 178 AEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ + + ++ G+L + D Y W+ RV A D+A G+ YLH + I
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVSFAKDIASGMAYLHSMNI---I 130
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVD----------------KHAANIRGTFGYL 279
HRD+ S N L+ ++ VADFGL+R MVD K + G ++
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLAR-LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 280 DPEYISTRNFTKKSDVYSFGVLLFELIA 307
PE I+ R++ +K DV+SFG++L E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G G FG V + VA+K++ S E EF E ++ L H LV L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQF--- 125
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKK 292
+HRD+ + N L++ +V+DFGLSR + D++ +++ F + PE + F+ K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SD+++FGVL++E+ + G+ P +
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 181 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 235
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 209
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ + +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G G FG V + VA+K++ S E EF E ++ L H LV L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLES---KQF 132
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKK 292
+HRD+ + N L++ +V+DFGLSR + D++ +++ F + PE + F+ K
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SD+++FGVL++E+ + G+ P +
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYE 214
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
Q +V + SL HL+ L + IA A+G++YLH ++ IHRD+
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSI---IHRDL 130
Query: 240 KSSNILLDQSMRARVADFGLS--REEMVDKHA-ANIRGTFGYLDPEYISTRN---FTKKS 293
KS+NI L + + ++ DFGL+ + H + G+ ++ PE I ++ ++ +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 294 DVYSFGVLLFELIAGRSP 311
DVY+FG++L+EL+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKK 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + AA + GT YL PE I R
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-LCGTLDYLPPEMIEGRMHD 184
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT T ++ I SR++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQDT-YKRI--SRVEFTFPDFVTE 231
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 131
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + AA + GT YL PE I R
Sbjct: 132 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-LCGTLDYLPPEMIEGRMHD 187
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 234
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G G FG V + VA+K++ S E EF E ++ L H LV L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQF--- 126
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKK 292
+HRD+ + N L++ +V+DFGLSR + D++ +++ F + PE + F+ K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SD+++FGVL++E+ + G+ P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVA---DFGLSREEMVD 266
+H+A D+A G +YL + IHRDI + N LL RVA DFG++R+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IY 209
Query: 267 KHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ + +G ++ PE FT K+D +SFGVLL+E+ +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + AA + GT YL PE I R
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-LCGTLDYLPPEMIEGRMHD 184
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 231
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQS 249
L S L + P L +H+A D+A G +YL + IHRDI + N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF---IHRDIAARNCLLTCP 177
Query: 250 MRARVA---DFGLSREEMVDKHAANIRG-----TFGYLDPEYISTRNFTKKSDVYSFGVL 301
RVA DFG++++ + + + +G ++ PE FT K+D +SFGVL
Sbjct: 178 GPGRVAKIGDFGMAQD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 302 LFELIA 307
L+E+ +
Sbjct: 236 LWEIFS 241
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
+F ++G GAF V A+ T + VA+K +A ++ +G E + E+ +L ++ H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G L+ +S G L + ++ + T + V ++YLHD +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGI- 137
Query: 233 PVIHRDIKSSNIL---LDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
+HRD+K N+L LD+ + ++DFGLS+ E + GT GY+ PE ++ + +
Sbjct: 138 --VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG-----LMEYVELAAMNTEGKTGWEEIVDSRLDGI 343
+K D +S GV+ + L+ G P L E + L A W++I DS D I
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI-LKAEYEFDSPYWDDISDSAKDFI 253
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
+F ++G GAF V A+ T + VA+K +A ++ +G E + E+ +L ++ H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G L+ +S G L + ++ + T + V ++YLHD +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGI- 137
Query: 233 PVIHRDIKSSNIL---LDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
+HRD+K N+L LD+ + ++DFGLS+ E + GT GY+ PE ++ + +
Sbjct: 138 --VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG-----LMEYVELAAMNTEGKTGWEEIVDSRLDGI 343
+K D +S GV+ + L+ G P L E + L A W++I DS D I
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI-LKAEYEFDSPYWDDISDSAKDFI 253
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
+F ++G GAF V A+ T + VA+K +A ++ +G E + E+ +L ++ H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G L+ +S G L + ++ + T + V ++YLHD +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGI- 137
Query: 233 PVIHRDIKSSNIL---LDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
+HRD+K N+L LD+ + ++DFGLS+ E + GT GY+ PE ++ + +
Sbjct: 138 --VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG-----LMEYVELAAMNTEGKTGWEEIVDSRLDGI 343
+K D +S GV+ + L+ G P L E + L A W++I DS D I
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI-LKAEYEFDSPYWDDISDSAKDFI 253
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 27/280 (9%)
Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++G+G +G VY + +S +A+K + + + E+ L L H+N+V +G
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 177 CAEKGQHMLVYVFMSK--GSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGAVP 232
+E G + +FM + G S L +GPL N + + GL+YLHD
Sbjct: 88 FSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 142
Query: 233 PVIHRDIKSSNILLDQ-SMRARVADFGLS-REEMVDKHAANIRGTFGYLDPEYIS--TRN 288
++HRDIK N+L++ S +++DFG S R ++ GT Y+ PE I R
Sbjct: 143 -IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE 348
+ K +D++S G + E+ G+ P L E AAM G + +
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGE--PQAAMFKVGMFKVHPEIPESMSA------ 253
Query: 349 LNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRK 388
E + KC P KR D+ ++ LK+ +K
Sbjct: 254 --EAKAFILKCFEPDPDKRACANDL--LVDEFLKVSSKKK 289
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G G V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD++++NIL+ ++ ++ADFGL+R E+ + + PE I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
FT KSDV+SFG+LL E++ GR P G+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 33/268 (12%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVM----LLGRLHHRNLVNL 173
++G+G+FG V+ A+ T + A+K L D + + + ++ L H L ++
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 174 VGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
+C + + L +V +++ G L H+ ++ + A ++ GL++LH +
Sbjct: 85 --FCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGI 140
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRNFT 290
++RD+K NILLD+ ++ADFG+ +E M+ D GT Y+ PE + + +
Sbjct: 141 ---VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDS-RLDGIFDVEEL 349
D +SFGVLL+E++ G+SP G E EE+ S R+D F L
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDE---------------EELFHSIRMDNPFYPRWL 242
Query: 350 -NEVASLAYKCVNRAPRKRPSMR-DIVQ 375
E L K R P KR +R DI Q
Sbjct: 243 EKEAKDLLVKLFVREPEKRLGVRGDIRQ 270
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 26/259 (10%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
+G G FG V+ A + VAVK + S E F E ++ L H LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDI 239
+ +++ FM+KGSL L + + + +A G+ ++ IHRD+
Sbjct: 249 EPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDL 304
Query: 240 KSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSFG 299
+++NIL+ S+ ++ADFGL+R + + PE I+ +FT KSDV+SFG
Sbjct: 305 RAANILVSASLVCKIADFGLAR--------VGAKFPIKWTAPEAINFGSFTIKSDVWSFG 356
Query: 300 VLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYK 358
+LL E++ GR P G+ + A+ + G+ R+ + E E+ ++ +
Sbjct: 357 ILLMEIVTYGRIPYPGMSNPEVIRAL----ERGY------RMPRPENCPE--ELYNIMMR 404
Query: 359 CVNRAPRKRPSMRDIVQVL 377
C P +RP+ I VL
Sbjct: 405 CWKNRPEERPTFEYIQSVL 423
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 16/239 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
+F ++G GAF V A+ T + VA+K +A + +G E + E+ +L ++ H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G L+ +S G L + ++ + T + V ++YLHD +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGI- 137
Query: 233 PVIHRDIKSSNIL---LDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
+HRD+K N+L LD+ + ++DFGLS+ E + GT GY+ PE ++ + +
Sbjct: 138 --VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 290 TKKSDVYSFGVLLFELIAGRSPL-----QGLMEYVELAAMNTEGKTGWEEIVDSRLDGI 343
+K D +S GV+ + L+ G P L E + L A W++I DS D I
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI-LKAEYEFDSPYWDDISDSAKDFI 253
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 149/300 (49%), Gaps = 52/300 (17%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVN 172
+G+G FG V KA + TVAVK+L ++ E ++ +E +L +++H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGP---------------------LTWN 210
L G C++ G +L+ + GSL L + GP LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA 270
+ A +++G++YL + ++ +HRD+ + NIL+ + + +++DFGLSR+ V + +
Sbjct: 151 DLISFAWQISQGMQYLAEMSL---VHRDLAARNILVAEGRKMKISDFGLSRD--VYEEDS 205
Query: 271 NIRGTFGYLDPEYISTRN-----FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAM 324
++ + G + ++++ + +T +SDV+SFGVLL+E++ G +P G + +
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----IPPERL 261
Query: 325 NTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
KTG R++ + E E+ L +C + P KRP DI + L +++ R
Sbjct: 262 FNLLKTG------HRMERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 33/268 (12%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVM----LLGRLHHRNLVNL 173
++G+G+FG V+ A+ T + A+K L D + + + ++ L H L ++
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 174 VGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
+C + + L +V +++ G L H+ ++ + A ++ GL++LH +
Sbjct: 84 --FCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRNFT 290
++RD+K NILLD+ ++ADFG+ +E M+ D GT Y+ PE + + +
Sbjct: 140 ---VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDS-RLDGIFDVEEL 349
D +SFGVLL+E++ G+SP G E EE+ S R+D F L
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDE---------------EELFHSIRMDNPFYPRWL 241
Query: 350 -NEVASLAYKCVNRAPRKRPSMR-DIVQ 375
E L K R P KR +R DI Q
Sbjct: 242 EKEAKDLLVKLFVREPEKRLGVRGDIRQ 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-H 166
+F +G GAFG V +A + TVAVK+L + E+E +E+ +L L +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----------- 215
H N+VNL+G C G +++ + G L + L + + I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 216 -----ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH-- 268
+ VA+G+ +L A IHRD+ + NILL ++ DFGL+R+ D +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 269 -AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNT 326
N R ++ PE I +T +SDV+S+G+ L+EL + G SP G+ + M
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
Query: 327 EGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSR 379
EG + E+ + C + P KRP+ + IVQ++ +
Sbjct: 279 EG-----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-H 166
+F +G GAFG V +A + TVAVK+L + E+E +E+ +L L +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----------- 215
H N+VNL+G C G +++ + G L + L + + I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 216 -----ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH-- 268
+ VA+G+ +L A IHRD+ + NILL ++ DFGL+R+ D +
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 269 -AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNT 326
N R ++ PE I +T +SDV+S+G+ L+EL + G SP G+ + M
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
Query: 327 EGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSR 379
EG + E+ + C + P KRP+ + IVQ++ +
Sbjct: 263 EG-----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-H 166
+F +G GAFG V +A + TVAVK+L + E+E +E+ +L L +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----------- 215
H N+VNL+G C G +++ + G L + L + + I
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 216 -----ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH-- 268
+ VA+G+ +L A IHRD+ + NILL ++ DFGL+R+ D +
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 269 -AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNT 326
N R ++ PE I +T +SDV+S+G+ L+EL + G SP G+ + M
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 327 EGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSR 379
EG + E+ + C + P KRP+ + IVQ++ +
Sbjct: 281 EG-----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + +G + L +DE +I ++A L Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 133
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + + GT YL PE I R
Sbjct: 134 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LXGTLDYLPPEMIEGRMHD 189
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 236
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + +G + L +DE +I ++A L Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 133
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 134 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 231
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-H 166
+F +G GAFG V +A + TVAVK+L + E+E +E+ +L L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----------- 215
H N+VNL+G C G +++ + G L + L + + I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 216 -----ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH-- 268
+ VA+G+ +L A IHRD+ + NILL ++ DFGL+R+ D +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 269 -AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNT 326
N R ++ PE I +T +SDV+S+G+ L+EL + G SP G+ + M
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 327 EGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSR 379
EG + E+ + C + P KRP+ + IVQ++ +
Sbjct: 286 EG-----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
NF ++G+G+FG V A + T E A+K+L D + + + E +L L
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + C + + V +++ G L H+ + G V A +++ GL +LH
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRN 288
+ I+RD+K N++LD ++ADFG+ +E M+D GT Y+ PE I+ +
Sbjct: 140 GI---IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
+ K D +++GVLL+E++AG+ P G
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 12/203 (5%)
Query: 119 LIGQGAFGPVYKAQMST----GETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + T G A+KVL AT + + E +L ++H +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L +G+ L+ F+ G L + L E +++ ++A ++A GL++LH +
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA-ELALGLDHLHSLGI- 151
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K NILLD+ ++ DFGLS+E + +K A + GT Y+ PE ++ + +
Sbjct: 152 --IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 292 KSDVYSFGVLLFELIAGRSPLQG 314
+D +S+GVL+FE++ G P QG
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQG 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 54/290 (18%)
Query: 119 LIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG-- 175
LIG G FG V+KA+ G+T ++ + ++++ E+E V L +L H N+V+ G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGCW 74
Query: 176 ------------------YCAEKGQH---------MLVYVFMSKGSLASHLYDENYGPLT 208
Y E ++ + F KG+L + L
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 209 WNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH 268
L + + + +G++Y+H +IHRD+K SNI L + + ++ DFGL D
Sbjct: 135 KVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 191
Query: 269 AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEG 328
+GT Y+ PE IS++++ K+ D+Y+ G++L EL+ + E
Sbjct: 192 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------------HVCDTAFET 238
Query: 329 KTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLS 378
+ ++ D + IFD +E +L K +++ P RP+ +I++ L+
Sbjct: 239 SKFFTDLRDGIISDIFDKKE----KTLLQKLLSKKPEDRPNTSEILRTLT 284
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 148/300 (49%), Gaps = 52/300 (17%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVN 172
+G+G FG V KA + TVAVK+L ++ E ++ +E +L +++H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGP---------------------LTWN 210
L G C++ G +L+ + GSL L + GP LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA 270
+ A +++G++YL + + +HRD+ + NIL+ + + +++DFGLSR+ V + +
Sbjct: 151 DLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLSRD--VYEEDS 205
Query: 271 NIRGTFGYLDPEYISTRN-----FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAM 324
++ + G + ++++ + +T +SDV+SFGVLL+E++ G +P G + +
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----IPPERL 261
Query: 325 NTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
KTG R++ + E E+ L +C + P KRP DI + L +++ R
Sbjct: 262 FNLLKTG------HRMERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMST-GE---TVAVKVL-ATDSKQGEKEFQTEVML 161
++++ + + +IG G G V ++ G+ VA+K L A +++ ++F +E +
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M+V +M GSL + L + G T V + V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGA 162
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI----RGTFG 277
G+ YL D +HRD+ + N+L+D ++ +V+DFGLSR D AA +
Sbjct: 163 GMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ PE I+ R F+ SDV+SFGV+++E++A
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 133
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 134 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEXIE 184
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 185 GRXHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 231
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 154
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 155 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 205
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 252
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ---GEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G FG V Q+ +TG+ A K L + GE E +L +++ R +V+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
K LV M+ G L H+Y V A ++ GLE LH +
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI--- 307
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSD 294
++RD+K NILLD R++D GL+ + GT GY+ PE + +T D
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 295 VYSFGVLLFELIAGRSPLQ 313
++ G LL+E+IAG+SP Q
Sbjct: 368 WWALGCLLYEMIAGQSPFQ 386
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 42/293 (14%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-H 166
+F +G GAFG V +A + TVAVK+L + E+E +E+ +L L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----------- 215
H N+VNL+G C G +++ + G L + L + + I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 216 -----ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKH-- 268
+ VA+G+ +L A IHRD+ + NILL ++ DFGL+R D +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 269 -AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNT 326
N R ++ PE I +T +SDV+S+G+ L+EL + G SP G+ + M
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 327 EGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSR 379
EG + E+ + C + P KRP+ + IVQ++ +
Sbjct: 286 EG-----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 148/300 (49%), Gaps = 52/300 (17%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVN 172
+G+G FG V KA + TVAVK+L ++ E ++ +E +L +++H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGP---------------------LTWN 210
L G C++ G +L+ + GSL L + GP LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA 270
+ A +++G++YL + + +HRD+ + NIL+ + + +++DFGLSR+ V + +
Sbjct: 151 DLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLSRD--VYEEDS 205
Query: 271 NIRGTFGYLDPEYISTRN-----FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAM 324
++ + G + ++++ + +T +SDV+SFGVLL+E++ G +P G + +
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----IPPERL 261
Query: 325 NTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMR 384
KTG R++ + E E+ L +C + P KRP DI + L +++ R
Sbjct: 262 FNLLKTG------HRMERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 25/266 (9%)
Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++G+G +G VY + +S +A+K + + + E+ L L H+N+V +G
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 177 CAEKGQHMLVYVFMSK--GSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGAVP 232
+E G + +FM + G S L +GPL N + + GL+YLHD
Sbjct: 74 FSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 128
Query: 233 PVIHRDIKSSNILLDQ-SMRARVADFGLS-REEMVDKHAANIRGTFGYLDPEYI--STRN 288
++HRDIK N+L++ S +++DFG S R ++ GT Y+ PE I R
Sbjct: 129 -IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE 348
+ K +D++S G + E+ G+ P L E AAM G + +
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELGE--PQAAMFKVGMFKVHPEIPESMSA------ 239
Query: 349 LNEVASLAYKCVNRAPRKRPSMRDIV 374
E + KC P KR D++
Sbjct: 240 --EAKAFILKCFEPDPDKRACANDLL 263
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMST-GE---TVAVKVL-ATDSKQGEKEFQTEVML 161
++++ + + +IG G G V ++ G+ VA+K L A +++ ++F +E +
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M+V +M GSL + L + G T V + V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGA 162
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI----RGTFG 277
G+ YL D +HRD+ + N+L+D ++ +V+DFGLSR D AA +
Sbjct: 163 GMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIA 307
+ PE I+ R F+ SDV+SFGV+++E++A
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ---GEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G FG V Q+ +TG+ A K L + GE E +L +++ R +V+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
K LV M+ G L H+Y V A ++ GLE LH +
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI--- 307
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSD 294
++RD+K NILLD R++D GL+ + GT GY+ PE + +T D
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 295 VYSFGVLLFELIAGRSPLQ 313
++ G LL+E+IAG+SP Q
Sbjct: 368 WWALGCLLYEMIAGQSPFQ 386
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 154
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 155 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDDLCGTLDYLPPEMIE 205
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 252
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G G FG V + VA+K++ S E EF E ++ L H LV L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ---F 126
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG--YLDPEYISTRNFTKK 292
+HRD+ + N L++ +V+DFGLSR + D++ ++ F + PE + F+ K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 293 SDVYSFGVLLFELIA-GRSPLQ 313
SD+++FGVL++E+ + G+ P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 145
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 146 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 196
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 243
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 129
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + + GT YL PE I R
Sbjct: 130 V---IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT-TLSGTLDYLPPEMIEGRMHD 185
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 232
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + ++ GT YL PE I R
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHD 184
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 231
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 133
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + ++ GT YL PE I R
Sbjct: 134 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHD 189
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 236
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 131
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 132 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 229
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 130
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 131 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEMIE 181
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 228
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 133
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 134 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 231
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 129
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + ++ GT YL PE I R
Sbjct: 130 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHD 185
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 232
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
V IHRDIK N+LL + ++ADFG S + ++ GT YL PE I R
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHD 184
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
+K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFPDFVTE 231
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 28/288 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V + ++ VA+K L +++ +EF +E +
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M++ FM G+L S L N G T V + +A
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIAS 127
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG---- 277
G+ YL + + +HRD+ + NIL++ ++ +V+DFGLSR + + G
Sbjct: 128 GMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 278 --YLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEE 334
+ PE I+ R FT SD +S+G++++E+++ G P + + A+
Sbjct: 185 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-------- 236
Query: 335 IVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D RL D + L C + RP +V L ++++
Sbjct: 237 --DYRLPPPPDCP--TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 28/288 (9%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V + ++ VA+K L +++ +EF +E +
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M++ FM G+L S L N G T V + +A
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRG---T 275
G+ YL + + +HRD+ + NIL++ ++ +V+DFGLSR E D + G
Sbjct: 130 GMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 276 FGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEE 334
+ PE I+ R FT SD +S+G++++E+++ G P + + A+
Sbjct: 187 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-------- 238
Query: 335 IVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
D RL D + L C + RP +V L ++++
Sbjct: 239 --DYRLPPPPDCP--TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 129
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 130 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDTLCGTLDYLPPEMIE 180
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 227
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 179
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 226
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTELCGTLDYLPPEMIE 179
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 226
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 127
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 128 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 178
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 225
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 132
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 133 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 230
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 131
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 132 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 229
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNL 173
L+G G +G VYK + + TG+ A+KV+ + E+E + E+ +L + HHRN+
Sbjct: 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATY 86
Query: 174 VGYCAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G +K Q LV F GS+ + + L +I ++ RGL +LH
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE--EMVDKHAANIRGTFGYLDPEYIS 285
V IHRDIK N+LL ++ ++ DFG+S + V + I GT ++ PE I+
Sbjct: 147 QHKV---IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIA 202
Query: 286 T-----RNFTKKSDVYSFGVLLFELIAGRSPL 312
+ KSD++S G+ E+ G PL
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTXLCGTLDYLPPEMIE 179
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 226
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 131
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 132 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDDLCGTLDYLPPEMIE 182
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 229
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 131
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 132 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEMIE 182
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 229
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGE-KEFQTEVMLLGRLHHRNLVNLV 174
L+G+G+F VY+A+ + TG VA+K++ + K G + Q EV + +L H +++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
Y + LV G + +L + P + N H + G+ YLH +
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGI--- 133
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFGYLDPEYISTRNFTKKS 293
+HRD+ SN+LL ++M ++ADFGL+ + +M + + GT Y+ PE + +S
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLES 193
Query: 294 DVYSFGVLLFELIAGRSPL 312
DV+S G + + L+ GR P
Sbjct: 194 DVWSLGCMFYTLLIGRPPF 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 129 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEMIE 179
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 226
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 125
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 126 V---IHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 176
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 223
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
K LV M+ G + H+Y DE+ + + GLE+LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK-HAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K N+LLD R++D GL+ E + GT G++ PE + +
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVE 320
D ++ GV L+E+IA R P + E VE
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
K LV M+ G + H+Y DE+ + + GLE+LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK-HAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K N+LLD R++D GL+ E + GT G++ PE + +
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVE 320
D ++ GV L+E+IA R P + E VE
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 119 LIGQGAFGPVYKA-QMSTGETV----AVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V A+KVL + S + KE E ++ + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L+G C LV M G L H+ EN G L ++ + +A+G+ YL D +
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQIAKGMSYLEDVRL- 140
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIRGTFGYLDPEYISTRNF 289
+HRD+ + N+L+ ++ DFGL+R +D+ HA + ++ E I R F
Sbjct: 141 --VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 290 TKKSDVYSFGVLLFELIA-GRSPLQGL 315
T +SDV+S+GV ++EL+ G P G+
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 130
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++A+FG S HA + R GT YL PE I
Sbjct: 131 V---IHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 181
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 228
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
K LV M+ G + H+Y DE+ + + GLE+LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK-HAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K N+LLD R++D GL+ E + GT G++ PE + +
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVE 320
D ++ GV L+E+IA R P + E VE
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------RTATYIT-ELANALSYCHSKR 131
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++A+FG S HA + R GT YL PE I
Sbjct: 132 V---IHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
R +K D++S GVL +E + G+ P + NT +T ++ I SR++ F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEA----------NTYQET-YKRI--SRVEFTFP 229
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
L + + P +RP +R++++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
K LV M+ G + H+Y DE+ + + GLE+LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK-HAANIRGTFGYLDPEYISTRNFTK 291
I+RD+K N+LLD R++D GL+ E + GT G++ PE + +
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVE 320
D ++ GV L+E+IA R P + E VE
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 48/296 (16%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTE 158
K++ + F +G+ FG VYK + + GE VA+K L D +G +EF+ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 79
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DEN---Y 204
ML RL H N+V L+G + +++ + S G L L D++
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM 264
L VH+ +A G+EYL V+H+D+ + N+L+ + +++D GL RE
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFRE-- 194
Query: 265 VDKHAANIRGTFG-------YLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+AA+ G ++ PE I F+ SD++S+GV+L+E+ + GL
Sbjct: 195 --VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-----YGLQP 247
Query: 318 YVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDI 373
Y + + E++ +R + V +L +C N P +RP +DI
Sbjct: 248 YCGYSNQDV------VEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 28/295 (9%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE- 154
G P+Y + + ++G+G FG VY+ + GE VAVK D KE
Sbjct: 15 GSPQYG---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK 71
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
F +E +++ L H ++V L+G E+ +++ ++ G L H + N L V
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVL 129
Query: 215 IALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANI- 272
+L + + + YL +HRDI NIL+ ++ DFGLSR E D + A++
Sbjct: 130 YSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 186
Query: 273 RGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTG 331
R ++ PE I+ R FT SDV+ F V ++E+++ G+ P L + + +
Sbjct: 187 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP 246
Query: 332 WEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHN 386
++ L +L +C + P RP ++V LS + +M +
Sbjct: 247 KPDLCPPVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 48/296 (16%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTE 158
K++ + F +G+ FG VYK + + GE VA+K L D +G +EF+ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 62
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DEN---Y 204
ML RL H N+V L+G + +++ + S G L L D++
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM 264
L VH+ +A G+EYL V+H+D+ + N+L+ + +++D GL RE
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFRE-- 177
Query: 265 VDKHAANIRGTFG-------YLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+AA+ G ++ PE I F+ SD++S+GV+L+E+ + GL
Sbjct: 178 --VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-----YGLQP 230
Query: 318 YVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDI 373
Y + + E++ +R + V +L +C N P +RP +DI
Sbjct: 231 YCGYSNQDV------VEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 119 LIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
++G+G FG VY+ + GE VAVK D KE F +E +++ L H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+G E+ +++ ++ G L +L + N L V +L + + + YL
Sbjct: 75 IGIIEEEPTWIIMELY-PYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 130
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANI-RGTFGYLDPEYISTRNFTK 291
+HRDI NIL+ ++ DFGLSR E D + A++ R ++ PE I+ R FT
Sbjct: 131 -VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 292 KSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
SDV+ F V ++E+++ G+ P L + + + ++ L
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVL---------- 239
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHN 386
+L +C + P RP ++V LS + +M +
Sbjct: 240 --YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDS----KQGEKEFQ 156
P+YS +D Q +G G+FG V+ + G A+KVL + KQ E
Sbjct: 1 PKYSLQDFQ-----ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-N 54
Query: 157 TEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA 216
E ++L + H ++ + G + Q ++ ++ G L S L P + A
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP--VAKFYA 112
Query: 217 LDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTF 276
+V LEYLH + I+RD+K NILLD++ ++ DFG ++ V + GT
Sbjct: 113 AEVCLALEYLHSKDI---IYRDLKPENILLDKNGHIKITDFGFAK--YVPDVTYXLCGTP 167
Query: 277 GYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPL 312
Y+ PE +ST+ + K D +SFG+L++E++AG +P
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 40/286 (13%)
Query: 119 LIGQGAFGPVYKAQMS----TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G+G FG V + + T VAVK + D S++ +EF +E + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 173 LVGYCAEKGQH-----MLVYVFMSKGSLASHLYDENY--GP--LTWNLRVHIALDVARGL 223
L+G C E M++ FM G L ++L GP + + +D+A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLD 280
EYL + +HRD+ + N +L M VADFGLS++ + R ++
Sbjct: 161 EYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
E ++ R +T KSDV++FGV ++E+ G +P G+ + E+ D
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---------------EMYDYL 262
Query: 340 LDG--IFDVEE-LNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
L G + E+ L+E+ + Y C P RP+ + L ++L+
Sbjct: 263 LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 119 LIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
++G+G FG VY+ + GE VAVK D KE F +E +++ L H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+G E+ +++ ++ G L +L + N L V +L + + + YL
Sbjct: 79 IGIIEEEPTWIIMELY-PYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 134
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANI-RGTFGYLDPEYISTRNFTK 291
+HRDI NIL+ ++ DFGLSR E D + A++ R ++ PE I+ R FT
Sbjct: 135 -VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 292 KSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELN 350
SDV+ F V ++E+++ G+ P L + + + ++ L
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVL---------- 243
Query: 351 EVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHN 386
+L +C + P RP ++V LS + +M +
Sbjct: 244 --YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 24/228 (10%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVL--ATDSKQG-E 152
++SG P+ + +G+G FG VY A+ VA+KVL + K+G E
Sbjct: 8 NSSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR 212
+ + E+ + LHH N++ L Y ++ + L+ + +G L Y E T++ +
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQ 123
Query: 213 --VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA 270
I ++A L Y H V IHRDIK N+LL ++ADFG S HA
Sbjct: 124 RTATIMEELADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWS------VHAP 174
Query: 271 NIR-----GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
++R GT YL PE I R +K D++ GVL +EL+ G P +
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNL 170
NF ++G+G+FG V ++ T E AVK+L D + + + E +L
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 403
Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + C + + V +++ G L H+ + G V A ++A GL +L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRN 288
+ I+RD+K N++LD ++ADFG+ +E + D GT Y+ PE I+ +
Sbjct: 462 GI---IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
+ K D ++FGVLL+E++AG++P +G
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Query: 113 TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV 171
T + T ++G G FG V+K + +TG +A K++ T + ++E + E+ ++ +L H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L K +LV ++ G L + DE+Y LT + + G+ ++H
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMY- 207
Query: 232 PPVIHRDIKSSNILL--DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
++H D+K NIL + + ++ DFGL+R + GT +L PE ++
Sbjct: 208 --ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG 314
+ +D++S GV+ + L++G SP G
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ +KG LV + G L + R I V G+ Y+H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KI 171
Query: 235 IHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK 291
+HRD+K N+LL+ + R+ DFGLS K + GT Y+ PE + + +
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDE 230
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKT----GWEEIVDSRLDGIFDVE 347
K DV+S GV+L+ L++G P G EY L + T W+++ +S D
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD------ 284
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTADEVSIDM 405
L K + P R S RD + H Q+ T +++S+D+
Sbjct: 285 -------LIRKMLTYVPSMRISARDALD--------------HEWIQTYTKEQISVDV 321
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ +KG LV + G L + R I V G+ Y+H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KI 147
Query: 235 IHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK 291
+HRD+K N+LL+ + R+ DFGLS K + GT Y+ PE + + +
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDE 206
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKT----GWEEIVDSRLDGIFDVE 347
K DV+S GV+L+ L++G P G EY L + T W+++ +S D
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD------ 260
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTADEVSIDM 405
L K + P R S RD + H Q+ T +++S+D+
Sbjct: 261 -------LIRKMLTYVPSMRISARDALD--------------HEWIQTYTKEQISVDV 297
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
NF ++G+G+FG V ++ T E AVK+L D + + + E +L
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + C + + V +++ G L H+ + G V A ++A GL +L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRN 288
+ I+RD+K N++LD ++ADFG+ +E + D GT Y+ PE I+ +
Sbjct: 141 GI---IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
+ K D ++FGVLL+E++AG++P +G
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ +KG LV + G L + R I V G+ Y+H +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KI 170
Query: 235 IHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK 291
+HRD+K N+LL+ + R+ DFGLS K + GT Y+ PE + + +
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDE 229
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKT----GWEEIVDSRLDGIFDVE 347
K DV+S GV+L+ L++G P G EY L + T W+++ +S D
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD------ 283
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTADEVSIDM 405
L K + P R S RD + H Q+ T +++S+D+
Sbjct: 284 -------LIRKMLTYVPSMRISARDALD--------------HEWIQTYTKEQISVDV 320
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDS--KQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL K+G E + + E+ + L H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
Y ++ + L+ F +G L L + +G ++A L Y H+ V I
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKV---I 136
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYISTRNFT 290
HRDIK N+L+ ++ADFG S HA ++R GT YL PE I +
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 291 KKSDVYSFGVLLFELIAGRSPL 312
+K D++ GVL +E + G P
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDS--KQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL K+G E + + E+ + L H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
Y ++ + L+ F +G L L + +G ++A L Y H+ V I
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKV---I 137
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYISTRNFT 290
HRDIK N+L+ ++ADFG S HA ++R GT YL PE I +
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 291 KKSDVYSFGVLLFELIAGRSPL 312
+K D++ GVL +E + G P
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDS--KQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL K+G E + + E+ + L H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
Y ++ + L+ F +G L L + +G ++A L Y H+ V I
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKV---I 136
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYISTRNFT 290
HRDIK N+L+ ++ADFG S HA ++R GT YL PE I +
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 291 KKSDVYSFGVLLFELIAGRSPL 312
+K D++ GVL +E + G P
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG V++ + +TG K + T + + E+ ++ +LHH L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+K + +L+ F+S G L + E+Y ++ ++ GL+++H+ + ++H D
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHS---IVHLD 174
Query: 239 IKSSNILLD--QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVY 296
IK NI+ + ++ ++ DFGL+ + D+ T + PE + +D++
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMW 234
Query: 297 SFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVASLA 356
+ GVL + L++G SP G +L + + WE FD + + V+ A
Sbjct: 235 AIGVLGYVLLSGLSPFAGED---DLETLQNVKRCDWE----------FDEDAFSSVSPEA 281
Query: 357 YKCV----NRAPRKRPSMRDIVQ----------VLSRILKMRHNR 387
+ + PRKR ++ D ++ + SRI R+N+
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNK 326
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 44/298 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ +KG LV + G L + R I V G+ Y H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXHKN---KI 147
Query: 235 IHRDIKSSNILLD---QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK 291
+HRD+K N+LL+ + R+ DFGLS K + GT Y+ PE + + +
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYDE 206
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKT----GWEEIVDSRLDGIFDVE 347
K DV+S GV+L+ L++G P G EY L + T W+++ +S D
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD------ 260
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQSTTADEVSIDM 405
L K + P R S RD + H Q+ T +++S+D+
Sbjct: 261 -------LIRKXLTYVPSXRISARDALD--------------HEWIQTYTKEQISVDV 297
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 170 LVNL--VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+V V Y + + LV ++ G L L + L + + + + +G+EYL
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGYLDPEY 283
+HRD+ + NIL++ ++ADFGL++ +DK +R + PE
Sbjct: 129 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 284 ISTRNFTKKSDVYSFGVLLFELI 306
+S F+++SDV+SFGV+L+EL
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 30/265 (11%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ +KG LV + G L + R I V G+ Y+H +
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKI--- 153
Query: 235 IHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK 291
+HRD+K N+LL+ + R+ DFGLS K + GT Y+ PE + + +
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDE 212
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKT----GWEEIVDSRLDGIFDVE 347
K DV+S GV+L+ L++G P G EY L + T W+++ +S D
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD------ 266
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRD 372
L K + P R S RD
Sbjct: 267 -------LIRKMLTYVPSMRISARD 284
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ ++ DFG++R+ D + +G ++
Sbjct: 144 AYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 245
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P+ RP+ +IV +L
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 84 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ ++ DFG++R+ D + +G ++
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 244
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P+ RP+ +IV +L
Sbjct: 245 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 46/283 (16%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG-----Y 278
YL+ +HRD+ + N ++ ++ DFG++R+ + + A +G G +
Sbjct: 144 AYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRD--IYETAYYRKGGKGLLPVRW 198
Query: 279 LDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVD 337
+ PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLK 243
Query: 338 SRLDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P+ RP+ +IV +L
Sbjct: 244 FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 82 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ ++ DFG++R+ D +G ++
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 242
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P+ RP+ +IV +L
Sbjct: 243 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 16/248 (6%)
Query: 111 KATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHR 168
K F +G GAF V A+ +TG+ AVK + + +G E + E+ +L ++ H
Sbjct: 21 KKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
N+V L LV +S G L + ++ G T + V + YLH
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK--GFYTEKDASTLIRQVLDAVYYLHR 138
Query: 229 GAVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
+ +HRD+K N+L D+ + ++DFGLS+ E + GT GY+ PE ++
Sbjct: 139 MGI---VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 195
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPL-----QGLMEYVELAAMNTEGKTGWEEIVDSRL 340
+ ++K D +S GV+ + L+ G P L E + L A W++I DS
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQI-LKAEYEFDSPYWDDISDSAK 254
Query: 341 DGIFDVEE 348
D I ++ E
Sbjct: 255 DFIRNLME 262
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ ++ DFG++R+ D +G ++
Sbjct: 144 AYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 245
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P+ RP+ +IV +L
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
D ++ NF IG+G+ G V A + TG+ VAVK + +Q + EV+++ H
Sbjct: 42 DPREYLANFIK-IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH 100
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
H N+V++ + +V F+ G+L + + + + L V R L YL
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYL 157
Query: 227 HDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN---IRGTFGYLDPEY 283
H+ V IHRDIKS +ILL R +++DFG + V K + GT ++ PE
Sbjct: 158 HNQGV---IHRDIKSDSILLTSDGRIKLSDFGFCAQ--VSKEVPKRKXLVGTPYWMAPEV 212
Query: 284 ISTRNFTKKSDVYSFGVLLFELIAGRSP 311
IS + + D++S G+++ E+I G P
Sbjct: 213 ISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+GAF V + ++ TG A K++ T S + ++ + E + L H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+E+G H LV+ ++ G L + Y + H + + + H V +H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGV---VH 126
Query: 237 RDIKSSNILLDQSMRA---RVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRNFTKK 292
RD+K N+LL + ++ADFGL+ E D+ A GT GYL PE + + K
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKP 186
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D+++ GV+L+ L+ G P
Sbjct: 187 VDIWACGVILYILLVGYPPF 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 170 LVNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+V G G+ LV ++ G L L + L + + + + +G+EYL
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGYLDPEY 283
+HRD+ + NIL++ ++ADFGL++ +DK +R + PE
Sbjct: 132 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 284 ISTRNFTKKSDVYSFGVLLFELI 306
+S F+++SDV+SFGV+L+EL
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 15/207 (7%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL--ATDSKQGEKEFQ--TEVML-LGRLHHRNLVN 172
++G G FG V+K + GE++ + V + K G + FQ T+ ML +G L H ++V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L+G C LV ++ GSL H+ ++ G L L ++ + +A+G+ YL + +
Sbjct: 98 LLGLCPGSSLQ-LVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHGM- 154
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHA---ANIRGTFGYLDPEYISTRNF 289
+HR++ + N+LL + +VADFG++ D + + ++ E I +
Sbjct: 155 --VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 290 TKKSDVYSFGVLLFELIA-GRSPLQGL 315
T +SDV+S+GV ++EL+ G P GL
Sbjct: 213 THQSDVWSYGVTVWELMTFGAEPYAGL 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 170 LVNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+V G G+ LV ++ G L L + L + + + + +G+EYL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGYLDPEY 283
+HRD+ + NIL++ ++ADFGL++ +DK +R + PE
Sbjct: 133 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 284 ISTRNFTKKSDVYSFGVLLFELI 306
+S F+++SDV+SFGV+L+EL
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDS--KQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL K G E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ------RTATYIT-ELANALSYCHSKR 132
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 133 V---IHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
R +K D++S GVL +E + G P +
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ ++ DFG++R+ D +G ++
Sbjct: 144 AYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 245
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P RP+ +IV +L
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 24/220 (10%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L D Q ++ E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C ++G+ LV ++ GSL +L + G L A + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLHSQHY 138
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIST 286
IHR++ + N+LLD ++ DFGL++ +R F Y PE +
Sbjct: 139 ---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKE 194
Query: 287 RNFTKKSDVYSFGVLLFELI----AGRSPLQGLMEYVELA 322
F SDV+SFGV L+EL+ + +SP +E + +A
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDS--KQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL K G E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
Y + + L+ + G++ L +DE +I ++A L Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ------RTATYIT-ELANALSYCHSKR 132
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
V IHRDIK N+LL + ++ADFG S HA + R GT YL PE I
Sbjct: 133 V---IHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
R +K D++S GVL +E + G P +
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 15/207 (7%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL--ATDSKQGEKEFQ--TEVML-LGRLHHRNLVN 172
++G G FG V+K + GE++ + V + K G + FQ T+ ML +G L H ++V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L+G C LV ++ GSL H+ ++ G L L ++ + +A+G+ YL + +
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHGM- 136
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHA---ANIRGTFGYLDPEYISTRNF 289
+HR++ + N+LL + +VADFG++ D + + ++ E I +
Sbjct: 137 --VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 290 TKKSDVYSFGVLLFELIA-GRSPLQGL 315
T +SDV+S+GV ++EL+ G P GL
Sbjct: 195 THQSDVWSYGVTVWELMTFGAEPYAGL 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 170 LVNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+V G G+ LV ++ G L L + L + + + + +G+EYL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR----GTFGYLDPEY 283
+HRD+ + NIL++ ++ADFGL++ +DK +R + PE
Sbjct: 145 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 284 ISTRNFTKKSDVYSFGVLLFELI 306
+S F+++SDV+SFGV+L+EL
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 27/267 (10%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG VYK T E VA+K++ +++ ++ Q E+ +L + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRNFT 290
IHRDIK++N+LL + ++ADFG++ + + N GT ++ PE I +
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE 348
K+D++S G+ EL G P L M + L N+ L+G +
Sbjct: 195 FKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP----------PTLEG----QH 240
Query: 349 LNEVASLAYKCVNRAPRKRPSMRDIVQ 375
C+N+ PR RP+ +++++
Sbjct: 241 SKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 111 KATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ T F ++G GAF V+ Q TG+ A+K + + + E+ +L ++ H N
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V L + LV +S G L + + G T + V ++YLH+
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 230 AVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ +HRD+K N+L +++ + + DFGLS+ E + + GT GY+ PE ++
Sbjct: 126 GI---VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTACGTPGYVAPEVLAQ 181
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPL-----QGLMEYVELAAMNTEGKTGWEEIVDSRLD 341
+ ++K D +S GV+ + L+ G P L E ++ E W++I +S D
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF-WDDISESAKD 240
Query: 342 GI 343
I
Sbjct: 241 FI 242
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 24/220 (10%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L D Q ++ E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C ++G+ LV ++ GSL +L + G L A + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLHAQHY 138
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIST 286
IHR++ + N+LLD ++ DFGL++ +R F Y PE +
Sbjct: 139 ---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKE 194
Query: 287 RNFTKKSDVYSFGVLLFELI----AGRSPLQGLMEYVELA 322
F SDV+SFGV L+EL+ + +SP +E + +A
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L D+ Q ++ E+ +L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C + G LV ++ GSL +L + G L A + G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH---A 152
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIST 286
IHRD+ + N+LLD ++ DFGL++ +R F Y PE +
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PECLKE 211
Query: 287 RNFTKKSDVYSFGVLLFELI----AGRSPLQGLMEYVELA 322
F SDV+SFGV L+EL+ + +SP +E + +A
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 251
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKAQ T A KV+ T S++ +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ F + G++ + + E PLT + + L YLHD + IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKI---IHRD 160
Query: 239 IKSSNILLDQSMRARVADFGLS-REEMVDKHAANIRGTFGYLDPEYI-----STRNFTKK 292
+K+ NIL ++ADFG+S + + + GT ++ PE + R + K
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 293 SDVYSFGVLLFELIAGRSP 311
+DV+S G+ L E+ P
Sbjct: 221 ADVWSLGITLIEMAEIEPP 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 135/293 (46%), Gaps = 32/293 (10%)
Query: 88 EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLAT 146
E ++ ++ + G P+ Y +K IGQGA G VY A ++TG+ VA++ +
Sbjct: 5 EILEKLRIIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NY 204
+ ++ E++++ + N+VN + + +V +++ GSL + + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM 264
G + R + + LE+LH V IHR+IKS NILL ++ DFG +
Sbjct: 117 GQIAAVCR-----ECLQALEFLHSNQV---IHRNIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 265 VDKHA-ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAA 323
++ + + GT ++ PE ++ + + K D++S G++ E+I G P + L A
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRA 225
Query: 324 MNTEGKTGWEEIVD-SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ G E+ + +L IF +C+ KR S ++++Q
Sbjct: 226 LYLIATNGTPELQNPEKLSAIF--------RDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQT-----EVMLLGRLHHRN 169
F ++G+G+FG V A++ TG+ AVKVL D + + + ++ L R +H
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPF 85
Query: 170 LVNLVGYCAEKGQHMLVYV--FMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARG 222
L L +C + L +V F++ G L H+ +DE R + A ++
Sbjct: 86 LTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA------RFYAA-EIISA 136
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK-HAANIRGTFGYLDP 281
L +LHD + I+RD+K N+LLD ++ADFG+ +E + + A GT Y+ P
Sbjct: 137 LMFLHDKGI---IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAP 193
Query: 282 EYISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
E + + D ++ GVLL+E++ G +P +
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK 149
K ++VS G P+ Y +K IGQGA G VY A ++TG+ VA++ + +
Sbjct: 8 KLRSIVSV-GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 150 QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NYGPL 207
++ E++++ + N+VN + + +V +++ GSL + + + G +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI 118
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK 267
R + + LE+LH V IHRDIKS NILL ++ DFG + ++
Sbjct: 119 AAVCR-----ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 268 HA-ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNT 326
+ + GT ++ PE ++ + + K D++S G++ E+I G P + L A+
Sbjct: 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRALYL 227
Query: 327 EGKTGWEEIVD-SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
G E+ + +L IF +C++ KR S ++++Q
Sbjct: 228 IATNGTPELQNPEKLSAIF--------RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 139/340 (40%), Gaps = 92/340 (27%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + T TVAVK+L + E K TE+ +L + HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 172 NL--------------VGYCA------------------------------------EKG 181
NL V YC E+G
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 182 QHMLVYVFMSKGSLASHLYDENYG----------------PLTWNLRVHIALDVARGLEY 225
+ + S S AS + E+ P+T + + VARG+E+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK---HAANIRGTFGYLDPE 282
L IHRD+ + NILL ++ ++ DFGL+R+ + + R ++ PE
Sbjct: 215 LSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPE 271
Query: 283 YISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLD 341
I + ++ KSDV+S+GVLL+E+ + G SP G+ + + EG R+
Sbjct: 272 SIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREG---------MRMR 322
Query: 342 GIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
E+ + C +R P++RP ++V+ L +L
Sbjct: 323 A--PEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKAQ T A KV+ T S++ +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ F + G++ + + E PLT + + L YLHD + IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKI---IHRD 160
Query: 239 IKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-----STRNFTK 291
+K+ NIL ++ADFG+S + + + + I GT ++ PE + R +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDY 219
Query: 292 KSDVYSFGVLLFELIAGRSP 311
K+DV+S G+ L E+ P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK 149
K ++VS G P+ Y +K IGQGA G VY A ++TG+ VA++ + +
Sbjct: 8 KLRSIVSV-GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 150 QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NYGPL 207
++ E++++ + N+VN + + +V +++ GSL + + + G +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI 118
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK 267
R + + LE+LH V IHRDIKS NILL ++ DFG + ++
Sbjct: 119 AAVCR-----ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 268 HA-ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNT 326
+ + GT ++ PE ++ + + K D++S G++ E+I G P + L A+
Sbjct: 171 SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRALYL 227
Query: 327 EGKTGWEEIVD-SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
G E+ + +L IF +C++ KR S ++++Q
Sbjct: 228 IATNGTPELQNPEKLSAIF--------RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 122/286 (42%), Gaps = 40/286 (13%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
L+G+G++G V K + TG VA+K + D K +K E+ LL +L H NLVNL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGP--LTWNLRVHIALDVARGLEYLHDGAVPP 233
C +K + LV+ F+ L D P L + + + G+ + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILD----DLELFPNGLDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPE-YISTR 287
+IHRDIK NIL+ QS ++ DFG +R E+ D A T Y PE +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA----TRWYRAPELLVGDV 200
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPLQG----------LMEYVELAAMNTEGKTGWEEIVD 337
+ K DV++ G L+ E+ G G +M L + E
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 338 SRLDGIFDVEELNE--------VASLAYKCVNRAPRKRPSMRDIVQ 375
RL I + E L V LA KC++ P KRP +++
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 33/290 (11%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK 149
K ++VS G P+ Y +K IGQGA G VY A ++TG+ VA++ + +
Sbjct: 9 KLRSIVSV-GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 150 QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NYGPL 207
++ E++++ + N+VN + + +V +++ GSL + + + G +
Sbjct: 60 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI 119
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK 267
R + + LE+LH V IHRDIKS NILL ++ DFG + ++
Sbjct: 120 AAVCR-----ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 268 HA-ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNT 326
+ + GT ++ PE ++ + + K D++S G++ E+I G P + L A+
Sbjct: 172 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRALYL 228
Query: 327 EGKTGWEEIVD-SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
G E+ + +L IF +C+ KR S ++++Q
Sbjct: 229 IATNGTPELQNPEKLSAIF--------RDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HR++ + N ++ ++ DFG++R+ D + +G ++
Sbjct: 144 AYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 245
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P RP+ +IV +L
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 110/218 (50%), Gaps = 24/218 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 171 VNLVGYCAEKGQHMLVYVFMSK-GSLASHL-----YDENYGPLTWNLRVHIALDVARGLE 224
V L +C + + + + +K G L ++ +DE R + A ++ LE
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALE 151
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDP 281
YLH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ P
Sbjct: 152 YLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 282 EYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
E ++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 42/281 (14%)
Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL------YDENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 86 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HR++ + N ++ ++ DFG++R+ D + +G ++
Sbjct: 145 AYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SD++SFGV+L+E+ + P QGL E+++
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---------------EQVLKFV 246
Query: 340 LDGIFDVEELN---EVASLAYKCVNRAPRKRPSMRDIVQVL 377
+DG + + N V L C P RP+ +IV +L
Sbjct: 247 MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK 149
K ++VS G P+ Y +K IGQGA G VY A ++TG+ VA++ + +
Sbjct: 8 KLRSIVSV-GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 150 QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NYGPL 207
++ E++++ + N+VN + + +V +++ GSL + + + G +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI 118
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK 267
R + + LE+LH V IHRDIKS NILL ++ DFG + ++
Sbjct: 119 AAVCR-----ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 268 HA-ANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSP 311
+ + GT ++ PE ++ + + K D++S G++ E+I G P
Sbjct: 171 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 27/207 (13%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKAQ T A KV+ T S++ +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ F + G++ + + E PLT + + L YLHD + IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKI---IHRD 160
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---------GTFGYLDPEYI----- 284
+K+ NIL ++ADFG+S A N R GT ++ PE +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS--------AKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 285 STRNFTKKSDVYSFGVLLFELIAGRSP 311
R + K+DV+S G+ L E+ P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKA+ TG A KV+ T S++ +++ E+ +L H +V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
G+ ++ F G++ + + + + G ++V + + L +LH + IHRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRI---IHRD 142
Query: 239 IKSSNILLDQSMRARVADFGLSREEM--VDKHAANIRGTFGYLDPEYISTRN-----FTK 291
+K+ N+L+ R+ADFG+S + + + K + I GT ++ PE + +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDY 201
Query: 292 KSDVYSFGVLLFELIAGRSP 311
K+D++S G+ L E+ P
Sbjct: 202 KADIWSLGITLIEMAQIEPP 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 109 LQKATC-------NFTTLIGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKE 154
LQ TC +G G+FG V + + +G+TV AVK L D + +
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
F EV + L HRNL+ L G M V GSL L ++ G
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSR 125
Query: 215 IALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA--- 270
A+ VA G+ YL IHRD+ + N+LL ++ DFGL R D H
Sbjct: 126 YAVQVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 271 NIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
+ + F + PE + TR F+ SD + FGV L+E+ G+ P GL L ++ EG+
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 330 TGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPS---MRDIV 374
RL D + ++ ++ +C P RP+ +RD +
Sbjct: 243 ---------RLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKA+ TG A KV+ T S++ +++ E+ +L H +V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
G+ ++ F G++ + + + + G ++V + + L +LH + IHRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRI---IHRD 134
Query: 239 IKSSNILLDQSMRARVADFGLSREEM--VDKHAANIRGTFGYLDPEYISTRN-----FTK 291
+K+ N+L+ R+ADFG+S + + + K + I GT ++ PE + +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDY 193
Query: 292 KSDVYSFGVLLFELIAGRSP 311
K+D++S G+ L E+ P
Sbjct: 194 KADIWSLGITLIEMAQIEPP 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 31/270 (11%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF- 136
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA---NIRGTFGYLDPEYISTRN 288
IHRD+ + N+LL ++ DFGL R D H + + F + PE + TR
Sbjct: 137 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 289 FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
F+ SD + FGV L+E+ G+ P GL L ++ EG+ RL D
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---------RLPRPEDCP 245
Query: 348 ELNEVASLAYKCVNRAPRKRPS---MRDIV 374
+ ++ ++ +C P RP+ +RD +
Sbjct: 246 Q--DIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 31/270 (11%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF- 132
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA---NIRGTFGYLDPEYISTRN 288
IHRD+ + N+LL ++ DFGL R D H + + F + PE + TR
Sbjct: 133 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 289 FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
F+ SD + FGV L+E+ G+ P GL L ++ EG+ RL D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---------RLPRPEDCP 241
Query: 348 ELNEVASLAYKCVNRAPRKRPS---MRDIV 374
+ ++ ++ +C P RP+ +RD +
Sbjct: 242 Q--DIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 143 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 256
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 257 PDMLFE---------LMRMCWQYNPKMRPSFLEII 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 152 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 265
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 266 PDMLFE---------LMRMCWQYNPKMRPSFLEII 291
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 139 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 252
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 253 PDMLFE---------LMRMCWQYNPKMRPSFLEII 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 146 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 259
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 260 PDMLFE---------LMRMCWQYNPKMRPSFLEII 285
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D +G ++
Sbjct: 146 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 259
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 260 PDMLFE---------LMRMCWQYNPKMRPSFLEII 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 145 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 258
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 259 PDMLFE---------LMRMCWQYNPKMRPSFLEII 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 145 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 258
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 259 PDMLFE---------LMRMCWQYNPKMRPSFLEII 284
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ TG+ A K++ T S + ++ + E + L H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+E+G H LV+ ++ G L + Y + H + + + H + +H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILESVNHCHLNGI---VH 126
Query: 237 RDIKSSNILLDQSMRA---RVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRNFTKK 292
RD+K N+LL + ++ADFGL+ E D+ A GT GYL PE + + K
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D+++ GV+L+ L+ G P
Sbjct: 187 VDMWACGVILYILLVGYPPF 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 109 LQKATC-------NFTTLIGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKE 154
LQ TC +G G+FG V + + +G+TV AVK L D + +
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
F EV + L HRNL+ L G M V GSL L ++ G
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSR 125
Query: 215 IALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA--- 270
A+ VA G+ YL IHRD+ + N+LL ++ DFGL R D H
Sbjct: 126 YAVQVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 271 NIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
+ + F + PE + TR F+ SD + FGV L+E+ G+ P GL L ++ EG+
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 330 TGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPS---MRDIV 374
RL D + ++ ++ +C P RP+ +RD +
Sbjct: 243 ---------RLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET------CTRFYTA-EIVSALEY 147
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A + GT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ +K SD+++ G ++++L+AG P + EY+
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 174 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 287
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F++ + C P+ RPS +I+
Sbjct: 288 PDMLFELMRM---------CWQYNPKMRPSFLEII 313
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG V++ + +TG A K + T + ++ + E+ + L H LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ + +++Y FMS G L + DE + ++ + V V +GL ++H+ +H D
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLD 280
Query: 239 IKSSNILL--DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVY 296
+K NI+ +S ++ DFGL+ + GT + PE + +D++
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW 340
Query: 297 SFGVLLFELIAGRSPLQG 314
S GVL + L++G SP G
Sbjct: 341 SVGVLSYILLSGLSPFGG 358
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLY--------DENYGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L + P + + + +A ++A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 142 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 255
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F++ + C P+ RPS +I+
Sbjct: 256 PDMLFELMRM---------CWQYNPKMRPSFLEII 281
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 31/270 (11%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF- 132
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA---NIRGTFGYLDPEYISTRN 288
IHRD+ + N+LL ++ DFGL R D H + + F + PE + TR
Sbjct: 133 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 289 FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
F+ SD + FGV L+E+ G+ P GL L ++ EG+ RL D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---------RLPRPEDCP 241
Query: 348 ELNEVASLAYKCVNRAPRKRPS---MRDIV 374
+ ++ ++ +C P RP+ +RD +
Sbjct: 242 Q--DIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ TG+ A K++ T S + ++ + E + L H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+E+G H LV+ ++ G L + Y + + + LE ++ + ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQILESVNHCHLNGIVH 126
Query: 237 RDIKSSNILL---DQSMRARVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRNFTKK 292
RD+K N+LL + ++ADFGL+ E D+ A GT GYL PE + + K
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D+++ GV+L+ L+ G P
Sbjct: 187 VDMWACGVILYILLVGYPPF 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLY--------DENYGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L + P + + + +A ++A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D + +G ++
Sbjct: 152 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL ++ EG G + D+
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEG--GLLDKPDNC 265
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D +F+ L C P+ RPS +I+
Sbjct: 266 PDMLFE---------LMRMCWQYNPKMRPSFLEII 291
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG V++ + +TG A K + T + ++ + E+ + L H LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ + +++Y FMS G L + DE + ++ + V V +GL ++H+ +H D
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLD 174
Query: 239 IKSSNILL--DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVY 296
+K NI+ +S ++ DFGL+ + GT + PE + +D++
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW 234
Query: 297 SFGVLLFELIAGRSPLQG 314
S GVL + L++G SP G
Sbjct: 235 SVGVLSYILLSGLSPFGG 252
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 31/270 (11%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF- 136
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA---NIRGTFGYLDPEYISTRN 288
IHRD+ + N+LL ++ DFGL R D H + + F + PE + TR
Sbjct: 137 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 289 FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
F+ SD + FGV L+E+ G+ P GL L ++ EG+ RL D
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---------RLPRPEDCP 245
Query: 348 ELNEVASLAYKCVNRAPRKRPS---MRDIV 374
+ ++ ++ +C P RP+ +RD +
Sbjct: 246 Q--DIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
NF T + + G ++K + G + VKVL S + ++F E L H N++
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 173 LVGYC-AEKGQH-MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
++G C + H L+ +M GSL + L++ + + V ALD+ARG+ +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--T 129
Query: 231 VPPVIHRD-IKSSNILLDQSMRARV--ADFGLSREEMVDKHAANIRGTFGYLDPEYISTR 287
+ P+I R + S ++++D+ M AR+ AD S + +A ++ PE + +
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP------AWVAPEALQKK 183
Query: 288 ---NFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIF 344
+ +D++SF VLL+EL+ P + +L+ M K E + + GI
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVP------FADLSNMEIGMKVALEGLRPTIPPGIS 237
Query: 345 DVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRI 380
V+ L C+N P KRP IV +L ++
Sbjct: 238 P-----HVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 125
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 126 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNL---- 173
+G G FG V + TGE VA+K + S + + + E+ ++ +L+H N+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 174 --VGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ A +L + G L +L ++ G +R ++ D++ L YLH+
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHEN 141
Query: 230 AVPPVIHRDIKSSNILLD---QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ IHRD+K NI+L Q + ++ D G ++E + GT YL PE +
Sbjct: 142 RI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 198
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPL 312
+ +T D +SFG L FE I G P
Sbjct: 199 KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNL---- 173
+G G FG V + TGE VA+K + S + + + E+ ++ +L+H N+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 174 --VGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ A +L + G L +L ++ G +R ++ D++ L YLH+
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHEN 140
Query: 230 AVPPVIHRDIKSSNILLD---QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ IHRD+K NI+L Q + ++ D G ++E + GT YL PE +
Sbjct: 141 RI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 197
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPL 312
+ +T D +SFG L FE I G P
Sbjct: 198 KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 148
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A + GT Y+ PE
Sbjct: 149 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 31/270 (11%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF- 132
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAA---NIRGTFGYLDPEYISTRN 288
IHRD+ + N+LL ++ DFGL R D H + + F + PE + TR
Sbjct: 133 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 289 FTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
F+ SD + FGV L+E+ G+ P GL L ++ EG+ RL D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE---------RLPRPEDCP 241
Query: 348 ELNEVASLAYKCVNRAPRKRPS---MRDIV 374
+ ++ ++ +C P RP+ +RD +
Sbjct: 242 Q--DIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 136 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
+G+G +G VYKA+ S G VA+K + D++ +G E+ LL LHH N+V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL-DVARGLEYLHDGAVPPVIH 236
+ LV+ FM K + DEN L + ++ I L + RG+ + H + +H
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHRI---LH 142
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYI-STRNFTKKSD 294
RD+K N+L++ ++ADFGL+R + + + T Y P+ + ++ ++ D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVEL----AAMNTEGKTGWEEI 335
++S G + E+I G+ G+ + +L + + T W ++
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 124
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 125 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 139 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 135 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 122
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 123 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 137 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 116 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 168
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 169 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
+G+G +G VYKA+ S G VA+K + D++ +G E+ LL LHH N+V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL-DVARGLEYLHDGAVPPVIH 236
+ LV+ FM K + DEN L + ++ I L + RG+ + H + +H
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHRI---LH 142
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYI-STRNFTKKSD 294
RD+K N+L++ ++ADFGL+R + + + T Y P+ + ++ ++ D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVEL----AAMNTEGKTGWEEI 335
++S G + E+I G+ G+ + +L + + T W ++
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 123
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 124 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 138 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 135 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 76 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 128
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 129 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 115 NFTTLIGQ-GAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+F +IG+ G FG VYKAQ T A KV+ T S++ +++ E+ +L H N+V
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L+ + ++ F + G++ + + E PLT + + L YLHD +
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKI- 129
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREE---MVDKHAANIRGTFGYLDPEYI----- 284
IHRD+K+ NIL ++ADFG+S + + + + I GT ++ PE +
Sbjct: 130 --IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCETS 186
Query: 285 STRNFTKKSDVYSFGVLLFELIAGRSP 311
R + K+DV+S G+ L E+ P
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 135 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 145
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 92 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 144
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 145 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 88 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 140
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 141 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 147
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 68 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 122
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 123 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 136 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 147
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 63 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 117
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 118 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 145
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 71 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 125
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 126 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 148
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 149 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 137 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 147
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 138 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 69 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 123
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 124 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 120
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 121 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 142 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 145
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 144
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A + GT Y+ PE
Sbjct: 145 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 138 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 120
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 121 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 150
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 151 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 107 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 159
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 160 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 33/248 (13%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EK 153
S SG+P + + + T IG+G FG V++ + GE VAVK+ ++ ++ E
Sbjct: 15 SGSGLPLLVQRTIAR-TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREA 72
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTW 209
E VML H N++ + + Q LV + GSL +L N +T
Sbjct: 73 EIYQTVML----RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 125
Query: 210 NLRVHIALDVARGLEYLHDGAV-----PPVIHRDIKSSNILLDQSMRARVADFGL----- 259
+ +AL A GL +LH V P + HRD+KS NIL+ ++ +AD GL
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 260 SREEMVDKHAANIRGTFGYLDPEY----ISTRNFT--KKSDVYSFGVLLFELIAGRSPLQ 313
S + +D + GT Y+ PE I+ ++F K++D+Y+ G++ +E IA R +
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG 244
Query: 314 GLMEYVEL 321
G+ E +L
Sbjct: 245 GIHEDYQL 252
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 138 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 176 YCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
E+ H LV+ ++ G L A Y E H + + Y H
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHSNG 148
Query: 231 VPPVIHRDIKSSNILLDQSMRA---RVADFGLSREEMVDKHAANIRGTFGYLDPEYISTR 287
+ +HR++K N+LL + ++ADFGL+ E + GT GYL PE +
Sbjct: 149 I---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++K D+++ GV+L+ L+ G P
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L + L + A +
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQL 120
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 121 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDS-KQGEKE-FQTEVMLLGRLHHRNLVNLVGY 176
IG G++G K + S G+ + K L S + EK+ +EV LL L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 177 CAEKGQHMLVYV--FMSKGSLASHLY----DENYGPLTWNLRVHIALDVARGLEYLH--- 227
++ L V + G LAS + + Y + LRV L +A L+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK-HAANIRGTFGYLDPEYIST 286
DG V+HRD+K +N+ LD ++ DFGL+R D+ A GT Y+ PE ++
Sbjct: 132 DGG-HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNR 190
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDV 346
++ +KSD++S G LL+EL A P + ELA EGK R+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKF-------RRIPYRYS- 241
Query: 347 EELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ELNE+ + + +N RPS+ +I++
Sbjct: 242 DELNEIIT---RMLNLKDYHRPSVEEILE 267
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 94 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 148
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 149 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 244
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 135 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 129
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 130 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 33/248 (13%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EK 153
S SG+P + + + T IG+G FG V++ + GE VAVK+ ++ ++ E
Sbjct: 28 SGSGLPLLVQRTIAR-TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREA 85
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTW 209
E VML H N++ + + Q LV + GSL +L N +T
Sbjct: 86 EIYQTVML----RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 138
Query: 210 NLRVHIALDVARGLEYLHDGAV-----PPVIHRDIKSSNILLDQSMRARVADFGL----- 259
+ +AL A GL +LH V P + HRD+KS NIL+ ++ +AD GL
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 260 SREEMVDKHAANIRGTFGYLDPEY----ISTRNFT--KKSDVYSFGVLLFELIAGRSPLQ 313
S + +D + GT Y+ PE I+ ++F K++D+Y+ G++ +E IA R +
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG 257
Query: 314 GLMEYVEL 321
G+ E +L
Sbjct: 258 GIHEDYQL 265
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDS-KQGEKE-FQTEVMLLGRLHHRNLVNLVGY 176
IG G++G K + S G+ + K L S + EK+ +EV LL L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 177 CAEKGQHMLVYV--FMSKGSLASHLY----DENYGPLTWNLRVHIALDVARGLEYLH--- 227
++ L V + G LAS + + Y + LRV L +A L+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYIST 286
DG V+HRD+K +N+ LD ++ DFGL+R D A GT Y+ PE ++
Sbjct: 132 DGG-HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDV 346
++ +KSD++S G LL+EL A P + ELA EGK R+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKF-------RRIPYRYS- 241
Query: 347 EELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ELNE+ + + +N RPS+ +I++
Sbjct: 242 DELNEIIT---RMLNLKDYHRPSVEEILE 267
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N ++ + ++ DFG++R+ D +G ++
Sbjct: 137 AYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGKTGWEEIVDSR 339
PE + FT SDV+SFGV+L+E+ P QGL L + G ++D +
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG------LLD-K 246
Query: 340 LDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
D D+ + L C P+ RPS +I+
Sbjct: 247 PDNCPDM-----LLELMRMCWQYNPKMRPSFLEII 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 176 YCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
E+ H LV+ ++ G L A Y E H + + Y H
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHSNG 124
Query: 231 VPPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTR 287
+ +HR++K N+LL + ++ADFGL+ E + GT GYL PE +
Sbjct: 125 I---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++K D+++ GV+L+ L+ G P
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 176 YCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
E+ H LV+ ++ G L A Y E H + + Y H
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHSNG 125
Query: 231 VPPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTR 287
+ +HR++K N+LL + ++ADFGL+ E + GT GYL PE +
Sbjct: 126 I---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++K D+++ GV+L+ L+ G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 176 YCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
E+ H LV+ ++ G L A Y E H + + Y H
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIAYCHSNG 125
Query: 231 VPPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTR 287
+ +HR++K N+LL + ++ADFGL+ E + GT GYL PE +
Sbjct: 126 I---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++K D+++ GV+L+ L+ G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA--NIRGTFGYLDPEYISTRNF 289
IHRDIK++N+LL + ++ADFG++ ++ D GT ++ PE I +
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
K+D++S G+ EL G P L M+ + L N L+G +
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN----------PPTLEGNYS-- 229
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ C+N+ P RP+ +++++
Sbjct: 230 --KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 119 LIGQGAFGPVYKAQMSTG-ETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGY 176
+IG GA V A + E VA+K + + Q E E+ + + HH N+V+
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 177 CAEKGQHMLVYVFMSKGS---LASHLY---DENYGPLTWNLRVHIALDVARGLEYLHDGA 230
K + LV +S GS + H+ + G L + I +V GLEYLH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSR------EEMVDKHAANIRGTFGYLDPEYI 284
IHRD+K+ NILL + ++ADFG+S + +K GT ++ PE +
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 285 -STRNFTKKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLD 341
R + K+D++SFG+ EL G +P M+ + L N S
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP---------PSLET 249
Query: 342 GIFDVEELNEVASLAYK----CVNRAPRKRPSMRDIVQ 375
G+ D E L + K C+ + P KRP+ ++++
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 27/267 (10%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRNFT 290
IHRDIK++N+LL + ++ADFG++ + + N GT ++ PE I +
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE 348
K+D++S G+ EL G P L M+ + L N L+G +
Sbjct: 198 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP----------PTLEGNYS--- 244
Query: 349 LNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ C+N+ P RP+ +++++
Sbjct: 245 -KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 119 LIGQGAFGPVYKAQMSTG-ETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGY 176
+IG GA V A + E VA+K + + Q E E+ + + HH N+V+
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 177 CAEKGQHMLVYVFMSKGS---LASHLY---DENYGPLTWNLRVHIALDVARGLEYLHDGA 230
K + LV +S GS + H+ + G L + I +V GLEYLH
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSR------EEMVDKHAANIRGTFGYLDPEYI 284
IHRD+K+ NILL + ++ADFG+S + +K GT ++ PE +
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 285 -STRNFTKKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLD 341
R + K+D++SFG+ EL G +P M+ + L N S
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP---------PSLET 244
Query: 342 GIFDVEELNEVASLAYK----CVNRAPRKRPSMRDIVQ 375
G+ D E L + K C+ + P KRP+ ++++
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 144
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 145 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 27/267 (10%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRNFT 290
IHRDIK++N+LL + ++ADFG++ + + N GT ++ PE I +
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 291 KKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE 348
K+D++S G+ EL G P L M+ + L N L+G +
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN----------PPTLEGNYS--- 229
Query: 349 LNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ C+N+ P RP+ +++++
Sbjct: 230 -KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 37/310 (11%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTL--------IGQGAFGPVYKAQ-MSTGETVAV 141
++S + +P++ + + + TL IG+G F VY+A + G VA+
Sbjct: 3 EQSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVAL 62
Query: 142 K---VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 198
K + + + E+ LL +L+H N++ E + +V G L+
Sbjct: 63 KKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 122
Query: 199 LY----DENYGP--LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA 252
+ + P W V + LE++H V +HRDIK +N+ + +
Sbjct: 123 IKHFKKQKRLIPERTVWKYFVQLC----SALEHMHSRRV---MHRDIKPANVFITATGVV 175
Query: 253 RVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSP 311
++ D GL R AA+ + GT Y+ PE I + KSD++S G LL+E+ A +SP
Sbjct: 176 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
Query: 312 LQGLMEYVELAAMNTEGKTGWEEIVD-SRLDGIFDVEELNEVASLAYKCVNRAPRKRPSM 370
G MN E D L EEL ++ ++ C+N P KRP +
Sbjct: 236 FYG-------DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM---CINPDPEKRPDV 285
Query: 371 RDIVQVLSRI 380
+ V R+
Sbjct: 286 TYVYDVAKRM 295
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDS-KQGEKE-FQTEVMLLGRLHHRNLVNLVGY 176
IG G++G K + S G+ + K L S + EK+ +EV LL L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 177 CAEKGQHMLVYV--FMSKGSLASHLY----DENYGPLTWNLRVHIALDVARGLEYLH--- 227
++ L V + G LAS + + Y + LRV L +A L+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYIST 286
DG V+HRD+K +N+ LD ++ DFGL+R D A GT Y+ PE ++
Sbjct: 132 DGG-HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDV 346
++ +KSD++S G LL+EL A P + ELA EGK R+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKF-------RRIPYRYS- 241
Query: 347 EELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ELNE+ + + +N RPS+ +I++
Sbjct: 242 DELNEIIT---RMLNLKDYHRPSVEEILE 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ L+H N+V L + LV + S G + +L +G + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVS 124
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD M ++ADFG S E G+ Y P
Sbjct: 125 AVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A G+ YL
Sbjct: 79 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLE 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 132 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLG 163
DL IG+G F V A+ + TG+ VAVK++ +S +K F+ EV ++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMK 61
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
L+H N+V L + LV + S G + +L +G + + +
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGWMKEKEARAKFRQIVSAV 119
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY 283
+Y H + +HRD+K+ N+LLD M ++ADFG S E G+ Y PE
Sbjct: 120 QYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 176
Query: 284 ISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
+ + + DV+S GV+L+ L++G P G
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ L+H N+V L + LV + S G + +L +G + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVS 124
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD M ++ADFG S E G+ Y P
Sbjct: 125 AVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA--NIRGTFGYLDPEYISTRNF 289
IHRDIK++N+LL + ++ADFG++ ++ D GT ++ PE I +
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
K+D++S G+ EL G P L M+ + L N L+G +
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP----------PTLEGNYS-- 249
Query: 348 ELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+ C+N+ P RP+ +++++
Sbjct: 250 --KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L + L + A +
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQL 120
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 121 STALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 115 NFTTLIGQGAFGP-VYKAQMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V +++T A+K+L K+ + + T E ++ RL H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 145
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYV 319
++ ++ K SD+++ G ++++L+AG P + EY+
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G+G++G VYKA TG+ VA+K + +S +E E+ ++ + ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ +V + GS++ + N LT + I +GLEYLH IHRD
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRK---IHRD 150
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVDKHAAN--IRGTFGYLDPEYISTRNFTKKSDVY 296
IK+ NILL+ A++ADFG++ ++ D A + GT ++ PE I + +D++
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAG-QLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 297 SFGVLLFELIAGRSP 311
S G+ E+ G+ P
Sbjct: 210 SLGITAIEMAEGKPP 224
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKAQ + GET A+K + + K+ E T E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
K + +LV+ + + L D G L L + G+ Y HD V +H
Sbjct: 69 IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LH 123
Query: 237 RDIKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-STRNFTKKS 293
RD+K N+L+++ ++ADFGL+R V K+ I T Y P+ + ++ ++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTI 182
Query: 294 DVYSFGVLLFELIAGRSPLQGLMEYVELA----AMNTEGKTGWEEIVD-SRLDGIFDVEE 348
D++S G + E++ G G+ E +L + T W + + + D F V E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L + L + A +
Sbjct: 446 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQL 500
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 501 STALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVL----------ATDSKQGEK---EFQTEVMLLGRL 165
+G GA+G V + G + A+KV+ + D+K EK E E+ LL L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS-----HLYDENYGPLTWNLRVHIALDVA 220
H N++ L +K LV F G L H +DE +I +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-------NIMKQIL 156
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQS---MRARVADFGLSREEMVDKHAANIRGTFG 277
G+ YLH ++HRDIK NILL+ + ++ DFGLS D + GT
Sbjct: 157 SGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
Y+ PE + + + +K DV+S GV+++ L+ G P G
Sbjct: 214 YIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L + L + A +
Sbjct: 446 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQL 500
Query: 220 ARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFG 277
+ L YL +HRDI + N+L+ + ++ DFGLSR E+ A+ +
Sbjct: 501 STALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 278 YLDPEYISTRNFTKKSDVYSFGVLLFE-LIAGRSPLQGL 315
++ PE I+ R FT SDV+ FGV ++E L+ G P QG+
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L + R +++LV
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLAL---NERIMLSLVSTG 248
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST- 286
+ V ++RD+K +NILLD+ R++D GL+ + K A++ GT GY+ PE +
Sbjct: 309 NRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 364
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ +D +S G +LF+L+ G SP +
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFR 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L + R +++LV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLAL---NERIMLSLVSTG 249
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST- 286
+ V ++RD+K +NILLD+ R++D GL+ + K A++ GT GY+ PE +
Sbjct: 310 NRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 365
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ +D +S G +LF+L+ G SP +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++ GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 89 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 142 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
+GQG+FG VY+ ++ G ET VA+K + + E+ EF E ++ + ++V
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGL 223
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFG--YLD 280
YL+ +HRD+ + N + + ++ DFG++R+ D + +G ++
Sbjct: 139 AYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 281 PEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
PE + FT SDV+SFGV+L+E+ P QGL
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 231
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L + R +++LV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLAL---NERIMLSLVSTG 249
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST- 286
+ V ++RD+K +NILLD+ R++D GL+ + K A++ GT GY+ PE +
Sbjct: 310 NRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 365
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ +D +S G +LF+L+ G SP +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L + R +++LV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLAL---NERIMLSLVSTG 249
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST- 286
+ V ++RD+K +NILLD+ R++D GL+ + K A++ GT GY+ PE +
Sbjct: 310 NRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 365
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ +D +S G +LF+L+ G SP +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKAQ + GET A+K + + K+ E T E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
K + +LV+ + + L D G L L + G+ Y HD V +H
Sbjct: 69 IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LH 123
Query: 237 RDIKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-STRNFTKKS 293
RD+K N+L+++ ++ADFGL+R V K+ + T Y P+ + ++ ++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTI 182
Query: 294 DVYSFGVLLFELIAGRSPLQGLMEYVELA----AMNTEGKTGWEEIVD-SRLDGIFDVEE 348
D++S G + E++ G G+ E +L + T W + + + D F V E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFG ++ E + HA + ++ E I
Sbjct: 139 DRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ G+ A K++ T S + ++ + E + L H N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+E+G H L++ ++ G L + Y + H + + + H V +H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGV---VH 144
Query: 237 RDIKSSNILLDQSMRA---RVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRNFTKK 292
RD+K N+LL ++ ++ADFGL+ E ++ A GT GYL PE + + K
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 204
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D+++ GV+L+ L+ G P
Sbjct: 205 VDLWACGVILYILLVGYPPF 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFG ++ E + HA + ++ E I
Sbjct: 137 DRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 32/225 (14%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G FG V++ + GE VAVK+ ++ ++ E E VML H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAA 65
Query: 177 CAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV- 231
+ Q LV + GSL +L N +T + +AL A GL +LH V
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 232 ----PPVIHRDIKSSNILLDQSMRARVADFGL-----SREEMVDKHAANIRGTFGYLDPE 282
P + HRD+KS NIL+ ++ +AD GL S + +D + GT Y+ PE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 283 Y----ISTRNFT--KKSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
I+ ++F K++D+Y+ G++ +E IA R + G+ E +L
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAV+++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ L+H N+V L + LV + S G + +L +G + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVS 124
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD M ++ADFG S E G+ Y P
Sbjct: 125 AVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++ GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 135 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAV+++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ L+H N+V L + LV + S G + +L +G + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVS 124
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD M ++ADFG S E G+ Y P
Sbjct: 125 AVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAP 181
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 18/240 (7%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
N ++G+G+FG V K + T + AVKV+ A+ + EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + +V + G L + + + I V G+ Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 232 PPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+HRD+K NILL+ + ++ DFGLS + + GT Y+ PE +
Sbjct: 143 ---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDSRLDGI 343
+ +K DV+S GV+L+ L++G P G EY L + T GK W I D D I
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET-GKYAFDLPQWRTISDDAKDLI 257
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFG ++ E + HA + ++ E I
Sbjct: 137 DRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 32/225 (14%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G FG V++ + GE VAVK+ ++ ++ E E VML H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAA 66
Query: 177 CAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV- 231
+ Q LV + GSL +L N +T + +AL A GL +LH V
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 232 ----PPVIHRDIKSSNILLDQSMRARVADFGL-----SREEMVDKHAANIRGTFGYLDPE 282
P + HRD+KS NIL+ ++ +AD GL S + +D + GT Y+ PE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 283 Y----ISTRNFT--KKSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
I+ ++F K++D+Y+ G++ +E IA R + G+ E +L
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
IG+G F V A+ + TG VAVK++ + +K F+ EV ++ L+H N+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ LV + S G + +L +G + + ++Y H + +
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKYI---V 136
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KKSD 294
HRD+K+ N+LLD M ++ADFG S E V G+ Y PE + + + D
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 295 VYSFGVLLFELIAGRSPLQG 314
V+S GV+L+ L++G P G
Sbjct: 197 VWSLGVILYTLVSGSLPFDG 216
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ L+H N+V L + LV + S G + +L +G + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVS 124
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD M ++ADFG S E G Y P
Sbjct: 125 AVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 147
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
++ ++ K SD+++ G ++++L+AG P +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKAQ + GET A+K + + K+ E T E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
K + +LV+ + + L D G L L + G+ Y HD V +H
Sbjct: 69 IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LH 123
Query: 237 RDIKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-STRNFTKKS 293
RD+K N+L+++ ++ADFGL+R V K+ + T Y P+ + ++ ++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTI 182
Query: 294 DVYSFGVLLFELIAGRSPLQGLMEYVELA----AMNTEGKTGWEEIVD-SRLDGIFDVEE 348
D++S G + E++ G G+ E +L + T W + + + D F V E
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 32/225 (14%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G FG V++ + GE VAVK+ ++ ++ E E VML H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAA 68
Query: 177 CAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV- 231
+ Q LV + GSL +L N +T + +AL A GL +LH V
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 232 ----PPVIHRDIKSSNILLDQSMRARVADFGL-----SREEMVDKHAANIRGTFGYLDPE 282
P + HRD+KS NIL+ ++ +AD GL S + +D + GT Y+ PE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 283 Y----ISTRNFT--KKSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
I+ ++F K++D+Y+ G++ +E IA R + G+ E +L
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 229
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 32/225 (14%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G FG V++ + GE VAVK+ ++ ++ E E VML H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAA 71
Query: 177 CAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV- 231
+ Q LV + GSL +L N +T + +AL A GL +LH V
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 232 ----PPVIHRDIKSSNILLDQSMRARVADFGL-----SREEMVDKHAANIRGTFGYLDPE 282
P + HRD+KS NIL+ ++ +AD GL S + +D + GT Y+ PE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 283 Y----ISTRNFT--KKSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
I+ ++F K++D+Y+ G++ +E IA R + G+ E +L
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 232
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++ GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFGL++ E + HA + ++ E I
Sbjct: 142 DRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
IG G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +M G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +VADFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 18/240 (7%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
N ++G+G+FG V K + T + AVKV+ A+ + EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + +V + G L + + + I V G+ Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 232 PPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+HRD+K NILL+ + ++ DFGLS + + GT Y+ PE +
Sbjct: 143 ---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDSRLDGI 343
+ +K DV+S GV+L+ L++G P G EY L + T GK W I D D I
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET-GKYAFDLPQWRTISDDAKDLI 257
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
IG G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +M G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +VADFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFG ++ E + HA + ++ E I
Sbjct: 135 DRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 38/271 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
+G G + VYK +TG VA+K + DS++G E+ L+ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 178 AEKGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + LV+ FM K + S L NL + + +GL + H+ +
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI--- 129
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-STRNFTK 291
+HRD+K N+L+++ + ++ DFGL+R V+ ++ + T Y P+ + +R ++
Sbjct: 130 LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYST 188
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNE 351
D++S G +L E+I G+ G + + +L IFD+ +
Sbjct: 189 SIDIWSCGCILAEMITGKPLFPGTND-------------------EEQLKLIFDI--MGT 227
Query: 352 VASLAYKCVNRAPRKRPSM-----RDIVQVL 377
+ V + P+ P++ RD+ QVL
Sbjct: 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVL 258
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFG ++ E + HA + ++ E I
Sbjct: 137 DRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 24/298 (8%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
N ++G+G+FG V K + T + AVKV+ A+ + EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + +V + G L + + + I V G+ Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 232 PPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+HRD+K NILL+ + ++ DFGLS + + GT Y+ PE +
Sbjct: 143 ---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDSRLDGI 343
+ +K DV+S GV+L+ L++G P G EY L + T GK W I D D I
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET-GKYAFDLPQWRTISDDAKDLI 257
Query: 344 FDV------EELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHHRKSQS 395
+ + L + + + + P++ D+ + S + +R + + +Q+
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQA 315
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKEFQT-EVMLLGRLHHRNL 170
F ++G+G+F V A +++T A+K+L K+ + + T E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEY 225
V L + + + G L ++ +DE R + A ++ LEY
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET------CTRFYTA-EIVSALEY 147
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPE 282
LH + IHRD+K NILL++ M ++ DFG ++ E A GT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
++ ++ K SD+++ G ++++L+AG P +
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR---EEMVDKHAANIRGTFGYLDPEYI 284
D + +HRD+ + N+L+ ++ DFG ++ E + HA + ++ E I
Sbjct: 142 DRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 285 STRNFTKKSDVYSFGVLLFELIA-GRSPLQGL 315
R +T +SDV+S+GV ++EL+ G P G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K + GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----MXGTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L Q +Q E+ +L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C ++G+ LV ++ GSL +L G L A + G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYLH---A 129
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIST 286
IHR + + N+LLD ++ DFGL++ +R F Y PE +
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 188
Query: 287 RNFTKKSDVYSFGVLLFELI 306
F SDV+SFGV L+EL+
Sbjct: 189 CKFYYASDVWSFGVTLYELL 208
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 41 NSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRS-NVVSAS 99
NS R + P RA + + + GP SP + + + E F+ + +V
Sbjct: 95 NSLRRDSPPPPARARQENG---MPEKPPGPRSPQREPQRVSH-----EQFRAALQLVVDP 146
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTE 158
G P SY D NF IG+G+ G V A + S+G+ VAVK + +Q + E
Sbjct: 147 GDPR-SYLD------NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 198
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA-----SHLYDENYGPLTWNLRV 213
V+++ H N+V + + +V F+ G+L + + +E
Sbjct: 199 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------- 250
Query: 214 HIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-- 271
+ L V + L LH V IHRDIKS +ILL R +++DFG + V K
Sbjct: 251 AVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRK 305
Query: 272 -IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSP 311
+ GT ++ PE IS + + D++S G+++ E++ G P
Sbjct: 306 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG VA+K++ + +K F+ EV +
Sbjct: 6 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRI 64
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ L+H N+V L + L+ + S G + +L +G + +
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVS 122
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD M ++ADFG S E V G+ Y P
Sbjct: 123 AVQYCHQKRI---VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAP 179
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L Q +Q E+ +L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G C ++G+ LV ++ GSL +L G L A + G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYLH---A 130
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIST 286
IHR + + N+LLD ++ DFGL++ +R F Y PE +
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 189
Query: 287 RNFTKKSDVYSFGVLLFELI 306
F SDV+SFGV L+EL+
Sbjct: 190 CKFYYASDVWSFGVTLYELL 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K + GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----MXGTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLV 174
++G G V+ A+ + VAVKVL D + F+ E L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 175 GYC-AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
AE L Y+ M +L ++ E GP+T + + D + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG 136
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K +NIL+ + +V DFG++R V + AA I GT YL PE
Sbjct: 137 I---IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI-GTAQYLSPEQAR 192
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ +SDVYS G +L+E++ G P G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K + GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----MXGTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 64
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 122
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 123 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 175
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 31/288 (10%)
Query: 41 NSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASG 100
N RRA +R + S ++L+++ ++ K N +SM E +
Sbjct: 33 NREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEF 92
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEV 159
+Y KD+ IG+G V + +TG AVK++ +++ E EV
Sbjct: 93 YQKYDPKDV----------IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEV 142
Query: 160 ---------MLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
+L H +++ L+ LV+ M KG L +L ++ L+
Sbjct: 143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEK 200
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA 270
I + + +LH + +HRD+K NILLD +M+ R++DFG S +
Sbjct: 201 ETRSIMRSLLEAVSFLHANNI---VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR 257
Query: 271 NIRGTFGYLDPEYISTR------NFTKKSDVYSFGVLLFELIAGRSPL 312
+ GT GYL PE + + K+ D+++ GV+LF L+AG P
Sbjct: 258 ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K + GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----MXGTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K + GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----MXGTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA+G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 66
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 124
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 125 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 177
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLV 174
++G G V+ A+ + VAVKVL D + F+ E L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 175 GYC-AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
AE L Y+ M +L ++ E GP+T + + D + L + H
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG 136
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K +NI++ + +V DFG++R V + AA I GT YL PE
Sbjct: 137 I---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQAR 192
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ +SDVYS G +L+E++ G P G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 105 SYKDLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTE 158
S D Q N+ L IG+G F V A+ + TG VA+K++ + +K F+ E
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-E 64
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
V ++ L+H N+V L + L+ + S G + +L +G +
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQ 122
Query: 219 VARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGY 278
+ ++Y H + +HRD+K+ N+LLD M ++ADFG S E V G Y
Sbjct: 123 IVSAVQYCHQKRI---VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPY 179
Query: 279 LDPEYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
PE + + + DV+S GV+L+ L++G P G
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 41/271 (15%)
Query: 120 IGQGAFG-PVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G+FG + G +K + S + +E + EV +L + H N+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 177 CAEKGQHMLVYVFMSKGSLASH-------LYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
E G +V + G L L+ E+ L W +++ +AL +++HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED-QILDWFVQICLAL------KHVHDR 144
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSR--EEMVDKHAANIRGTFGYLDPEYISTR 287
+ +HRDIKS NI L + ++ DFG++R V+ A I GT YL PE +
Sbjct: 145 KI---LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICENK 200
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVE 347
+ KSD+++ G +L+EL L E +M + +V + G F
Sbjct: 201 PYNNKSDIWALGCVLYELCT-------LKHAFEAGSM--------KNLVLKIISGSFPPV 245
Query: 348 ELN---EVASLAYKCVNRAPRKRPSMRDIVQ 375
L+ ++ SL + R PR RPS+ I++
Sbjct: 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + T + A K++ T S + ++ + E + L H N+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+E+G H LV+ ++ G L + E Y + +H L+ + + HD ++
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI-HQHD-----IV 152
Query: 236 HRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRNFTK 291
HRD+K N+LL + ++ADFGL+ E ++ A GT GYL PE + + K
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGK 212
Query: 292 KSDVYSFGVLLFELIAGRSPL 312
D+++ GV+L+ L+ G P
Sbjct: 213 PVDIWACGVILYILLVGYPPF 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V K Q +G +A K++ + K + E+ +L + +V G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + P +V IA V RGL YL + ++HR
Sbjct: 84 YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQ--IMHR 139
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWS 198
Query: 298 FGVLLFELIAGRSPL 312
G+ L EL GR P+
Sbjct: 199 MGLSLVELAVGRYPI 213
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLV 174
++G G V+ A+ + VAVKVL D + F+ E L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 175 GYC-AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
AE L Y+ M +L ++ E GP+T + + D + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG 136
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K +NI++ + +V DFG++R V + AA I GT YL PE
Sbjct: 137 I---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQAR 192
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ +SDVYS G +L+E++ G P G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
+F+ E+ ++ + + + G + ++Y +M S+ +DE + L N
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK--FDEYFFVLDKNYTC 146
Query: 214 HIALDVAR--------GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMV 265
I + V + Y+H+ + HRD+K SNIL+D++ R +++DFG S E MV
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGES-EYMV 203
Query: 266 DKHAANIRGTFGYLDPEYISTRNFTK--KSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
DK RGT+ ++ PE+ S + K D++S G+ L+ + P + VEL
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+G G FG V + TG VAVK+L S + + E+ L H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++S G L ++ G L + + G++Y H V +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMV---V 138
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KKSD 294
HRD+K N+LLD M A++ADFGLS + G+ Y PE IS R + + D
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVD 198
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE-LN-EV 352
++S GV+L+ L+ G P + T +++I DGIF + LN V
Sbjct: 199 IWSSGVILYALLCGTLPFD-----------DDHVPTLFKKIC----DGIFYTPQYLNPSV 243
Query: 353 ASLAYKCVNRAPRKRPSMRDI 373
SL + P KR +++DI
Sbjct: 244 ISLLKHMLQVDPMKRATIKDI 264
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLV 174
++G G V+ A+ + VAVKVL D + F+ E L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 175 GYC-AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
AE L Y+ M +L ++ E GP+T + + D + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG 136
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K +NI++ + +V DFG++R V + AA I GT YL PE
Sbjct: 137 I---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQAR 192
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ +SDVYS G +L+E++ G P G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETV-AVKVL---ATDSKQGEKEFQTE-VMLLGRLHHRN 169
+F +IG+G+FG V A+ E AVKVL A K+ EK +E +LL + H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
LV L + V +++ G L HL E L R + A ++A L YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAA-EIASALGYLHSL 158
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPEYISTRN 288
+ ++RD+K NILLD + DFGL +E + + + GT YL PE + +
Sbjct: 159 NI---VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ + D + G +L+E++ G P
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLV 174
++G G V+ A+ + VAVKVL D + F+ E L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 175 GYC-AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
AE L Y+ M +L ++ E GP+T + + D + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG 136
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K +NI++ + +V DFG++R V + AA I GT YL PE
Sbjct: 137 I---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQAR 192
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ +SDVYS G +L+E++ G P G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
IG G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +VADFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---T 157
PE + DL++ IG G+FG VY A+ + E VA+K ++ KQ +++Q
Sbjct: 13 PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
EV L +L H N + G C + + + GS AS L + + PL +
Sbjct: 65 EVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTH 122
Query: 218 DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG 277
+GL YLH + IHRD+K+ NILL + ++ DFG + + A GT
Sbjct: 123 GALQGLAYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSAS---IMAPANXFVGTPY 176
Query: 278 YLDPEYISTRN---FTKKSDVYSFGVLLFELIAGRSPL 312
++ PE I + + K DV+S G+ EL + PL
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---T 157
PE + DL++ IG G+FG VY A+ + E VA+K ++ KQ +++Q
Sbjct: 52 PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 103
Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
EV L +L H N + G C + + + GS AS L + + PL +
Sbjct: 104 EVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTH 161
Query: 218 DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG 277
+GL YLH + IHRD+K+ NILL + ++ DFG + + A GT
Sbjct: 162 GALQGLAYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSAS---IMAPANXFVGTPY 215
Query: 278 YLDPEYISTRN---FTKKSDVYSFGVLLFELIAGRSPL 312
++ PE I + + K DV+S G+ EL + PL
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 32/287 (11%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
LIG+G FG VY + + + + D++ K F+ EVM + H N+V +G C
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
H+ + + KG + + L N IA ++ +G+ YLH ++H+D
Sbjct: 100 SP-PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 239 IKSSNILLDQSMRARVADFGL---SREEMVDKHAANIR---GTFGYLDPEYISTRN---- 288
+KS N+ D + + DFGL S + +R G +L PE I +
Sbjct: 156 LKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 289 -----FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGI 343
F+K SDV++ G + +EL A P + + M T K +I +
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGK---- 270
Query: 344 FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILKMRHNRKHH 390
E++ + C +RP+ ++ +L ++ K R+ R H
Sbjct: 271 -------EISDILLFCWAFEQEERPTFTKLMDMLEKLPK-RNRRLSH 309
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKGQHMLVYVFMSKGS--LASHLYDENYGPLTWNLRVHIALD--------VARGLEYL 226
C K KGS L + + L N+ V L + GL Y+
Sbjct: 86 CRTKASPY----NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 227 HDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRG-----TFGYLDP 281
H + +HRD+K++N+L+ + ++ADFGL+R + K++ R T Y P
Sbjct: 142 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 282 E-YISTRNFTKKSDVYSFGVLLFELIAGRSP-LQGLMEYVELAAMN 325
E + R++ D++ G ++ E+ RSP +QG E +LA ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+G G FG V + TG VAVK+L S + + E+ L H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++S G L Y +G + + + ++Y H V +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFD--YICKHGRVEEMEARRLFQQILSAVDYCHRHMV---V 133
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KKSD 294
HRD+K N+LLD M A++ADFGLS + + G+ Y PE IS R + + D
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVD 193
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE-LNE-V 352
++S GV+L+ L+ G P E+V G G+F + E LN V
Sbjct: 194 IWSCGVILYALLCGTLPFDD--EHVPTLFKKIRG-------------GVFYIPEYLNRSV 238
Query: 353 ASLAYKCVNRAPRKRPSMRDI 373
A+L + P KR +++DI
Sbjct: 239 ATLLMHMLQVDPLKRATIKDI 259
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 93 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 148
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 207
Query: 298 FGVLLFELIAGRSPL---QGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNEVAS 354
G+ L E+ GR P+ G M EL E G+F + E
Sbjct: 208 MGLSLVEMAVGRYPIGSGSGSMAIFELLDYIV------NEPPPKLPSGVFSL----EFQD 257
Query: 355 LAYKCVNRAPRKRPSMRDIV 374
KC+ + P +R ++ ++
Sbjct: 258 FVNKCLIKNPAERADLKQLM 277
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 491
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 590
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRN 169
+ +G+GA G V A T E VAVK++ A D + K+ E+ + L+H N
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 65
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V G+ E L + S G L + + P R L G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI 123
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLS-------REEMVDKHAANIRGTFGYLDPE 282
+ HRDIK N+LLD+ +++DFGL+ RE +++K GT Y+ PE
Sbjct: 124 GI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC----GTLPYVAPE 176
Query: 283 YISTRNF-TKKSDVYSFGVLLFELIAGRSP 311
+ R F + DV+S G++L ++AG P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
NF IG+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 35 NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 93
Query: 174 VGYCAEKGQHMLVYVFMSKGSLA-----SHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ +V F+ G+L + + +E + L V + L LH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA--------AVCLAVLQALSVLHA 145
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN---IRGTFGYLDPEYIS 285
V IHRDIKS +ILL R +++DFG + V K + GT ++ PE IS
Sbjct: 146 QGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 200
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSP 311
+ + D++S G+++ E++ G P
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLV 174
++G G V+ A+ + VAVKVL D + F+ E L+H +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 175 GYC-AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
AE L Y+ M +L ++ E GP+T + + D + L + H
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG 153
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K +NI++ + +V DFG++R V + AA I GT YL PE
Sbjct: 154 I---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQAR 209
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ +SDVYS G +L+E++ G P G
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
NF IG+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 33 NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 91
Query: 174 VGYCAEKGQHMLVYVFMSKGSLA-----SHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ +V F+ G+L + + +E + L V + L LH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA--------AVCLAVLQALSVLHA 143
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN---IRGTFGYLDPEYIS 285
V IHRDIKS +ILL R +++DFG + V K + GT ++ PE IS
Sbjct: 144 QGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 198
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSP 311
+ + D++S G+++ E++ G P
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 490
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 589
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 136 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHR 191
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 192 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 250
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 251 MGLSLVEMAVGRYPI 265
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
NF IG+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 24 NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 82
Query: 174 VGYCAEKGQHMLVYVFMSKGSLA-----SHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ +V F+ G+L + + +E + L V + L LH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA--------AVCLAVLQALSVLHA 134
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN---IRGTFGYLDPEYIS 285
V IHRDIKS +ILL R +++DFG + V K + GT ++ PE IS
Sbjct: 135 QGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 189
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSP 311
+ + D++S G+++ E++ G P
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 31/240 (12%)
Query: 82 GKSMWLEGFKRS-NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETV 139
G M E F+ + +V G P SY D NF IG+G+ G V A + S+G+ V
Sbjct: 1 GSHMSHEQFRAALQLVVDPGDPR-SYLD------NFIK-IGEGSTGIVCIATVRSSGKLV 52
Query: 140 AVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA--- 196
AVK + +Q + EV+++ H N+V + + +V F+ G+L
Sbjct: 53 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 112
Query: 197 --SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARV 254
+ + +E + L V + L LH V IHRDIKS +ILL R ++
Sbjct: 113 THTRMNEEQIA--------AVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKL 161
Query: 255 ADFGLSREEMVDKHAAN---IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSP 311
+DFG + V K + GT ++ PE IS + + D++S G+++ E++ G P
Sbjct: 162 SDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 119 LIGQGAFGPVYKAQ----MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNL 170
++G+G +G V++ + +TG+ A+KVL + + + E +L + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
V+L+ G+ L+ ++S G L L E G + +++ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRNF 289
+ I+RD+K NI+L+ ++ DFGL +E + D + GT Y+ PE +
Sbjct: 142 I---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG 314
+ D +S G L+++++ G P G
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+G G FG V + TG VAVK+L S + + E+ L H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++S G L Y +G + + + ++Y H V +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFD--YICKHGRVEEMEARRLFQQILSAVDYCHRHMV---V 133
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KKSD 294
HRD+K N+LLD M A++ADFGLS + G+ Y PE IS R + + D
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVD 193
Query: 295 VYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEE-LNE-V 352
++S GV+L+ L+ G P E+V G G+F + E LN V
Sbjct: 194 IWSCGVILYALLCGTLPFDD--EHVPTLFKKIRG-------------GVFYIPEYLNRSV 238
Query: 353 ASLAYKCVNRAPRKRPSMRDI 373
A+L + P KR +++DI
Sbjct: 239 ATLLMHMLQVDPLKRATIKDI 259
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 177 CAEKGQHMLVYVFMSKGS--LASHLYDENYGPLTWNLRVHIALD--------VARGLEYL 226
C K KGS L + + L N+ V L + GL Y+
Sbjct: 85 CRTKASP----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 227 HDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDP 281
H + +HRD+K++N+L+ + ++ADFGL+R + K++ R T Y P
Sbjct: 141 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 282 E-YISTRNFTKKSDVYSFGVLLFELIAGRSP-LQGLMEYVELAAMN 325
E + R++ D++ G ++ E+ RSP +QG E +LA ++
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 242
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKGQHMLVYVFMSKGS--LASHLYDENYGPLTWNLRVHIALD--------VARGLEYL 226
C K KGS L + + L N+ V L + GL Y+
Sbjct: 86 CRTKASPY----NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 227 HDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDP 281
H + +HRD+K++N+L+ + ++ADFGL+R + K++ R T Y P
Sbjct: 142 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 282 E-YISTRNFTKKSDVYSFGVLLFELIAGRSP-LQGLMEYVELAAMN 325
E + R++ D++ G ++ E+ RSP +QG E +LA ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 119 LIGQGAFGPVYKAQ----MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNL 170
++G+G +G V++ + +TG+ A+KVL + + + E +L + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
V+L+ G+ L+ ++S G L L E G + +++ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-IRGTFGYLDPEYISTRNF 289
+ I+RD+K NI+L+ ++ DFGL +E + D + GT Y+ PE +
Sbjct: 142 I---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG 314
+ D +S G L+++++ G P G
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLH-HRNLVNLV 174
+G+GA+G V+K+ TGE VAVK + +S ++ F+ E+M+L L H N+VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 175 GYCAEKGQHMLVYVF-MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ VF + L + + P+ + ++ + + ++YLH G +
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGGL-- 130
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANI-----RGTFGYLDPE----- 282
+HRD+K SNILL+ +VADFGLSR + + + NI T + D +
Sbjct: 131 -LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 283 YISTR------------NFTKKSDVYSFGVLLFELIAGRSPLQG 314
Y++TR +TK D++S G +L E++ G+ G
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 63 LSDSTVGPESPVKSGRNGNGKSMWLEGFKRS-NVVSASGIPEYSYKDLQKATCNFTTLIG 121
+ + GP SP + + + E F+ + +V G P SY D NF IG
Sbjct: 37 MPEKPPGPRSPQREPQRVSH-----EQFRAALQLVVDPGDPR-SYLD------NFIK-IG 83
Query: 122 QGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 84 EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 143
Query: 181 GQHMLVYVFMSKGSLA-----SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V F+ G+L + + +E + L V + L LH V I
Sbjct: 144 DELWVVMEFLEGGALTDIVTHTRMNEEQIA--------AVCLAVLQALSVLHAQGV---I 192
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN---IRGTFGYLDPEYISTRNFTKK 292
HRDIKS +ILL R +++DFG + V K + GT ++ PE IS + +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 293 SDVYSFGVLLFELIAGRSP 311
D++S G+++ E++ G P
Sbjct: 251 VDIWSLGIMVIEMVDGEPP 269
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHH-RNLVNLVGY 176
+G G G V+K + TG +AVK + + +K+ K ++ ++ + H +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ M G+ A L GP+ + + + + + L YL + VIH
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVIH 148
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK----- 291
RD+K SNILLD+ + ++ DFG+S + DK G Y+ PE I + TK
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 292 KSDVYSFGVLLFELIAGRSPLQ 313
++DV+S G+ L EL G+ P +
Sbjct: 209 RADVWSLGISLVELATGQFPYK 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 156
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 215
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 216 MGLSLVEMAVGRYPI 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 148
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 247
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 148
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 247
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 132
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 231
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 132
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 231
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 128
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 138
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 237
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 11 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 128
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYISTRNF 289
V ++RDIK N++LD+ ++ DFGL +E + D GT YL PE + ++
Sbjct: 129 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 290 TKKSDVYSFGVLLFELIAGRSPL 312
+ D + GV+++E++ GR P
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 120 IGQGAFGPVYKA--QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLV 174
+G G FG V K QM + + + E E ++ +L + +V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
G C E MLV G L +L +N N+ + + V+ G++YL +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNI-IELVHQVSMGMKYLEESNF--- 126
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTF--GYLDPEYISTRNFT 290
+HRD+ + N+LL A+++DFGLS+ D+ + A G + + PE I+ F+
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 291 KKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
KSDV+SFGVL++E + G+ P +G M+ E+ AM +G+
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLEKGE 225
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 41/274 (14%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
G + + ++ ++ GS L GP + ++ +GL+YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAA--NIRGTFGYLDPEYISTRNF 289
IHRDIK++N+LL + ++ADFG++ ++ D GT ++ PE I +
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQGL--MEYVELAAMNT------EGKTGWEEIVDSRLD 341
K+D++S G+ EL G P + M + L N + ++E +D+
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDA--- 254
Query: 342 GIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
C+N+ P RP+ +++++
Sbjct: 255 -----------------CLNKDPSFRPTAKELLK 271
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 125
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYISTRNF 289
V ++RDIK N++LD+ ++ DFGL +E + D GT YL PE + ++
Sbjct: 126 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 290 TKKSDVYSFGVLLFELIAGRSPL 312
+ D + GV+++E++ GR P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D A + GT Y+ PE + +++ +SD++S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 298 FGVLLFELIAGRSPL 312
G+ L E+ GR P+
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 125
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYISTRNF 289
V ++RDIK N++LD+ ++ DFGL +E + D GT YL PE + ++
Sbjct: 126 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 290 TKKSDVYSFGVLLFELIAGRSPL 312
+ D + GV+++E++ GR P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLA----TDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K Q TG+ A K + + S++G +E + EV +L + H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ +S G L L ++ LT + + G+ YLH +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIA 130
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFG++ + NI GT ++ PE ++
Sbjct: 131 ---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 187
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVD-SRLDGIFDVE 347
++D++S GV+ + L++G SP G+T E + + S ++ FD E
Sbjct: 188 LGLEADMWSIGVITYILLSGASPFL--------------GETKQETLTNISAVNYDFDEE 233
Query: 348 ELNEVASLAYKCVNRAPRKRPSMR 371
+ + LA + R K P R
Sbjct: 234 YFSNTSELAKDFIRRLLVKDPKRR 257
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 13 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 130
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTR 287
V ++RDIK N++LD+ ++ DFGL +E + D A ++ GT YL PE +
Sbjct: 131 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDN 185
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++ + D + GV+++E++ GR P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L KE + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFGL++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ G+ A ++ T S + ++ + E + L H N+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+E+G H L++ ++ G L + Y + H + + + H V +H
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGV---VH 133
Query: 237 RDIKSSNILLDQSMRA---RVADFGLSREEMVDKHAA-NIRGTFGYLDPEYISTRNFTKK 292
R++K N+LL ++ ++ADFGL+ E ++ A GT GYL PE + + K
Sbjct: 134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 193
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D+++ GV+L+ L+ G P
Sbjct: 194 VDLWACGVILYILLVGYPPF 213
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 125
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTR 287
V ++RDIK N++LD+ ++ DFGL +E + D A ++ GT YL PE +
Sbjct: 126 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDN 180
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++ + D + GV+++E++ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 125
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTR 287
V ++RDIK N++LD+ ++ DFGL +E + D A ++ GT YL PE +
Sbjct: 126 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDN 180
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++ + D + GV+++E++ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
++ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
L + V + + G L HL E T ++ LEYLH
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRD 125
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTR 287
V ++RDIK N++LD+ ++ DFGL +E + D A ++ GT YL PE +
Sbjct: 126 V---VYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDN 180
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
++ + D + GV+++E++ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA- 178
+G+G +G V++ + GE+VAVK+ ++ +Q +TE+ L H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 179 ---EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-----DGA 230
Q L+ + GSL L + P +L + +A+ A GL +LH
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 231 VPPVIHRDIKSSNILLDQSMRARVADFGLSR-----EEMVDKHAANIRGTFGYLDPEYIS 285
P + HRD KS N+L+ +++ +AD GL+ + +D GT Y+ PE +
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLD 190
Query: 286 TRNFT------KKSDVYSFGVLLFELIAGRSPLQGLME 317
+ T K +D+++FG++L+E IA R+ + G++E
Sbjct: 191 EQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVNGIVE 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLA----TDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K Q TG+ A K + + S++G +E + EV +L + H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ +S G L L ++ LT + + G+ YLH +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFG++ + NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVD-SRLDGIFDVE 347
++D++S GV+ + L++G SP G+T E + + S ++ FD E
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFL--------------GETKQETLTNISAVNYDFDEE 240
Query: 348 ELNEVASLAYKCVNRAPRKRPSMR 371
+ + LA + R K P R
Sbjct: 241 YFSNTSELAKDFIRRLLVKDPKRR 264
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 30/285 (10%)
Query: 51 PIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQ 110
P R D + T ESP K ++L KR N++ A D++
Sbjct: 296 PARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFL---KRDNLLIA---------DIE 343
Query: 111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
NF + + QG + + K Q+ VA+KVL +++ + +E E ++ +L +
Sbjct: 344 LGCGNFGS-VRQGVYR-MRKKQID----VAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 397
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V L+G C + MLV G L L + N+ + V+ G++YL +
Sbjct: 398 IVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEK 455
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGT----FGYLDPEYIS 285
+HR++ + N+LL A+++DFGLS+ D R + PE I+
Sbjct: 456 NF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 286 TRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
R F+ +SDV+S+GV ++E ++ G+ P + M+ E+ A +GK
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKK-MKGPEVMAFIEQGK 556
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L KE + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFGL++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G G G V+K + +G +A K++ + K + E+ +L + +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
G+ + M GSL L + G + + +++ V +GL YL + ++HR
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 132
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
D+K SNIL++ ++ DFG+S + ++D+ A GT Y+ PE + +++ +SD++S
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSGQ-LIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWS 191
Query: 298 FGVLLFELIAGRSP 311
G+ L E+ GR P
Sbjct: 192 MGLSLVEMAVGRYP 205
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF--MSKGSLASHLYDENYGPLTW 209
E+ +Q E+ +L +L H N+V LV + + L VF +++G + PL+
Sbjct: 81 EQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---PTLKPLSE 136
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKH 268
+ D+ +G+EYLH +IHRDIK SN+L+ + ++ADFG+S E + D
Sbjct: 137 DQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 269 AANIRGTFGYLDPEYIS-TRN-FTKKS-DVYSFGVLLFELIAGRSPL 312
+N GT ++ PE +S TR F+ K+ DV++ GV L+ + G+ P
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 89 GFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVL--A 145
GF R V + Y+DLQ +G GA+G V A TG VA+K L
Sbjct: 10 GFYRQEVTKTAWEVRAVYRDLQP--------VGSGAYGAVCSAVDGRTGAKVAIKKLYRP 61
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA------EKGQHMLVYVFMSK--GSLAS 197
S+ K E+ LL + H N++ L+ + LV FM G L
Sbjct: 62 FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK 121
Query: 198 HLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADF 257
H E G V+ L +GL Y+H + IHRD+K N+ +++ ++ DF
Sbjct: 122 H---EKLGEDRIQFLVYQML---KGLRYIHAAGI---IHRDLKPGNLAVNEDCELKILDF 172
Query: 258 GLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
GL+R+ D T Y PE I + +T+ D++S G ++ E+I G++ +G
Sbjct: 173 GLARQ--ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+IG+GAF V + TG+ AVK++ + ++ + E + L H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGA 230
L+ + G +V+ FM L + ++ V H + L Y HD
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 231 VPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIR-GTFGYLDPEYIST 286
+ IHRD+K N+LL + S ++ DFG++ + A R GT ++ PE +
Sbjct: 151 I---IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ K DV+ GV+LF L++G P G E
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 31/264 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLA----TDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K Q TG+ A K + S++G +E + EV +L + H N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ +S G L L ++ LT + + G+ YLH +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIA 151
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFG++ + NI GT ++ PE ++
Sbjct: 152 ---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 208
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVD-SRLDGIFDVE 347
++D++S GV+ + L++G SP G+T E + + S ++ FD E
Sbjct: 209 LGLEADMWSIGVITYILLSGASPFL--------------GETKQETLTNISAVNYDFDEE 254
Query: 348 ELNEVASLAYKCVNRAPRKRPSMR 371
+ + LA + R K P R
Sbjct: 255 YFSNTSELAKDFIRRLLVKDPKRR 278
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
L+H N+V L + LV + S G + +L +G +
Sbjct: 67 XKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLV--AHGRXKEKEARAKFRQIVS 124
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
++Y H + +HRD+K+ N+LLD ++ADFG S E G Y P
Sbjct: 125 AVQYCHQKFI---VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 282 EYISTRNFT-KKSDVYSFGVLLFELIAGRSPLQG 314
E + + + DV+S GV+L+ L++G P G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV---NL 173
IG GA+G V A+ TG+ VA+K + A D K E+ +L H N++ ++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ G+ VYV + H + PLT + + RGL+Y+H V
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV-- 180
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTR------ 287
IHRD+K SN+L++++ ++ DFG++R Y EY++TR
Sbjct: 181 -IHRDLKPSNLLVNENCELKIGDFGMARGLCTSP------AEHQYFMTEYVATRWYRAPE 233
Query: 288 ------NFTKKSDVYSFGVLLFELIAGRSPLQG 314
+T+ D++S G + E++A R G
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
LT + + VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 267 K---HAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELA 322
+ R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 306
Query: 323 AMNTEGKTGWEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
EG +R+ + E+ + C + P +RP+ ++V+ L +L
Sbjct: 307 RRLKEG---------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLL 354
Query: 382 K 382
+
Sbjct: 355 Q 355
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
LT + + VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 267 K---HAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELA 322
+ R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 304
Query: 323 AMNTEGKTGWEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
EG +R+ + E+ + C + P +RP+ ++V+ L +L
Sbjct: 305 RRLKEG---------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLL 352
Query: 382 K 382
+
Sbjct: 353 Q 353
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKGQHMLVYVFMSKGS--LASHLYDENYGPLTWNLRVHIALD--------VARGLEYL 226
C K K S L + + L N+ V L + GL Y+
Sbjct: 86 CRTKASPY----NRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 227 HDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDP 281
H + +HRD+K++N+L+ + ++ADFGL+R + K++ R T Y P
Sbjct: 142 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 282 E-YISTRNFTKKSDVYSFGVLLFELIAGRSP-LQGLMEYVELAAMN 325
E + R++ D++ G ++ E+ RSP +QG E +LA ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV---NL 173
IG GA+G V A+ TG+ VA+K + A D K E+ +L H N++ ++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ G+ VYV + H + PLT + + RGL+Y+H V
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV-- 179
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTR------ 287
IHRD+K SN+L++++ ++ DFG++R Y EY++TR
Sbjct: 180 -IHRDLKPSNLLVNENCELKIGDFGMARGLCTSP------AEHQYFMTEYVATRWYRAPE 232
Query: 288 ------NFTKKSDVYSFGVLLFELIAGRSPLQG 314
+T+ D++S G + E++A R G
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
LT + + VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 267 K---HAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELA 322
+ R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 311
Query: 323 AMNTEGKTGWEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
EG +R+ + E+ + C + P +RP+ ++V+ L +L
Sbjct: 312 RRLKEG---------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLL 359
Query: 382 K 382
+
Sbjct: 360 Q 360
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH + I
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDL---I 149
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 207
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 208 WALGVLIYEMAAGYPPF 224
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
Query: 120 IGQGAFGPVYKA--QMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVG 175
+G G FG V + +M + VA+KVL +++ + +E E ++ +L + +V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
C + MLV G L L + N+ + V+ G++YL + +
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEKNF---V 132
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGT----FGYLDPEYISTRNFTK 291
HRD+ + N+LL A+++DFGLS+ D R + PE I+ R F+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 292 KSDVYSFGVLLFELIA-GRSPLQGLMEYVELAAMNTEGK 329
+SDV+S+GV ++E ++ G+ P + M+ E+ A +GK
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKK-MKGPEVMAFIEQGK 230
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 207 LTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
LT + + VA+G+E+L A IHRD+ + NILL + ++ DFGL+R+ D
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 267 K---HAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIA-GRSPLQGLMEYVELA 322
+ R ++ PE I R +T +SDV+SFGVLL+E+ + G SP G+ E
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 313
Query: 323 AMNTEGKTGWEEIVDSRLDGI-FDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
EG +R+ + E+ + C + P +RP+ ++V+ L +L
Sbjct: 314 RRLKEG---------TRMRAPDYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLL 361
Query: 382 K 382
+
Sbjct: 362 Q 362
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 135
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 136 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 192
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 193 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 236
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNLVNLV 174
+G+G F Y+ M T E A KV+ K +KE TE+ + L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
G+ + VYV + S L + +T + +G++YLH+ V
Sbjct: 109 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV-- 163
Query: 234 VIHRDIKSSNILLDQSMRARVADFGL-SREEMVDKHAANIRGTFGYLDPEYISTRNFTKK 292
IHRD+K N+ L+ M ++ DFGL ++ E + ++ GT Y+ PE + + + +
Sbjct: 164 -IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 293 SDVYSFGVLLFELIAGRSPLQ 313
D++S G +L+ L+ G+ P +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFE 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 135
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 136 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 192
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 193 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 236
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNLVNLV 174
+G+G F Y+ M T E A KV+ K +KE TE+ + L + ++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
G+ + VYV + S L + +T + +G++YLH+ V
Sbjct: 93 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV-- 147
Query: 234 VIHRDIKSSNILLDQSMRARVADFGL-SREEMVDKHAANIRGTFGYLDPEYISTRNFTKK 292
IHRD+K N+ L+ M ++ DFGL ++ E + ++ GT Y+ PE + + + +
Sbjct: 148 -IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 293 SDVYSFGVLLFELIAGRSPLQ 313
D++S G +L+ L+ G+ P +
Sbjct: 207 VDIWSLGCILYTLLVGKPPFE 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 33 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 84
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 85 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 141 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 196
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 197 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 312 LQG 314
G
Sbjct: 257 FPG 259
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G GA+G V + T A+K++ + S + EV +L L H N++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL---DVARGLEYLHDGAVPP 233
+K + LV G L+DE + +N V A+ V G+ YLH
Sbjct: 105 FEDKRNYYLVMECYKGG----ELFDEIIHRMKFN-EVDAAVIIKQVLSGVTYLHK---HN 156
Query: 234 VIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT 290
++HRD+K N+LL+ + ++ DFGLS K GT Y+ PE + + +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYD 215
Query: 291 KKSDVYSFGVLLFELIAGRSPLQG 314
+K DV+S GV+LF L+AG P G
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGG 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNLVNLV 174
+G+G F Y+ M T E A KV+ K +KE TE+ + L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
G+ + VYV + S L + +T + +G++YLH+ V
Sbjct: 109 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV-- 163
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFGYLDPEYISTRNFTKK 292
IHRD+K N+ L+ M ++ DFGL+ + E + + GT Y+ PE + + + +
Sbjct: 164 -IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFE 222
Query: 293 SDVYSFGVLLFELIAGRSPLQ 313
D++S G +L+ L+ G+ P +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFE 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 18 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 69
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 70 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 125
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 126 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 181
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 182 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
Query: 312 LQG 314
G
Sbjct: 242 FPG 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 35 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 86
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 87 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 142
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 143 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 198
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 199 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258
Query: 312 LQG 314
G
Sbjct: 259 FPG 261
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 33 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 84
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 85 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 141 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 196
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 197 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 312 LQG 314
G
Sbjct: 257 FPG 259
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 11 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 62
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 63 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 119 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 174
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 312 LQG 314
G
Sbjct: 235 FPG 237
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVK-VLATDSKQGEKEFQTEVMLLGRLHH-RNLVNLVGY 176
IG+GA+G V K +G+ +AVK + +T ++ +K+ ++ ++ R +V G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 177 CAEKGQHMLVYVFMSKG--SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+G + MS ++Y + + I L + L +L + +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KI 147
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHA-ANIRGTFGYLDPEYI----STRNF 289
IHRDIK SNILLD+S ++ DFG+S ++VD A G Y+ PE I S + +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISG-QLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 290 TKKSDVYSFGVLLFELIAGRSP 311
+SDV+S G+ L+EL GR P
Sbjct: 207 DVRSDVWSLGITLYELATGRFP 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 27 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 78
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 79 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 134
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 135 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 190
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 191 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 250
Query: 312 LQG 314
G
Sbjct: 251 FPG 253
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 37 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 88
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 89 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 144
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 145 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 200
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 201 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260
Query: 312 LQG 314
G
Sbjct: 261 FPG 263
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 11 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 62
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 63 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 119 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 174
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 312 LQG 314
G
Sbjct: 235 FPG 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 7 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 58
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 59 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 114
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 115 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 170
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 171 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
Query: 312 LQG 314
G
Sbjct: 231 FPG 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 78 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 129
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 130 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 185
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 186 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 241
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 242 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 301
Query: 312 LQG 314
G
Sbjct: 302 FPG 304
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNLVNLV 174
+G+G F Y+ M T E A KV+ K +KE TE+ + L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
G+ + VYV + S L + +T + +G++YLH+ V
Sbjct: 109 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV-- 163
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSRE-EMVDKHAANIRGTFGYLDPEYISTRNFTKK 292
IHRD+K N+ L+ M ++ DFGL+ + E + + GT Y+ PE + + + +
Sbjct: 164 -IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 293 SDVYSFGVLLFELIAGRSPLQ 313
D++S G +L+ L+ G+ P +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFE 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + S++G ++ + EV +L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L K +L+ ++ G L L ++ LT + G+ YLH +
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ R ++ DFGL+ + NI GT ++ PE ++
Sbjct: 137 ---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA---AMNTEGKTGWEEIVDSRLDGIFD 345
++D++S GV+ + L++G SP G + LA A+N E F+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE----------------FE 237
Query: 346 VEELNEVASLAYKCVNRA----PRKRPSMRDIVQ 375
E + ++LA + R P+KR +++D +Q
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 32/243 (13%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 12 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 63
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 64 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 119
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA- 252
+A H +++++ + R L Y+H + HRDIK N+LLD
Sbjct: 120 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 175
Query: 253 RVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSP 311
++ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 176 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235
Query: 312 LQG 314
G
Sbjct: 236 FPG 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 116 FTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLV 171
+ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 155 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 214
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + V + + G L HL E + + ++ L+YLH +
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH--SE 270
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTRN 288
V++RD+K N++LD+ ++ DFGL +E + D A ++ GT YL PE + +
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEYLAPEVLEDND 328
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ + D + GV+++E++ GR P
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 17/232 (7%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLY--DENYGPLT 208
+E Q ++ +L H N+V L + G+ +VY+ + + +Y +Y
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 209 WNLRV-HIAL---DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSREE 263
L V ++ L + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 264 MVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 116 FTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLV 171
+ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 211
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + V + + G L HL E + + ++ L+YLH +
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH--SE 267
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTRN 288
V++RD+K N++LD+ ++ DFGL +E + D A ++ GT YL PE + +
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEYLAPEVLEDND 325
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ + D + GV+++E++ GR P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 22/214 (10%)
Query: 115 NFTTL--IGQGAFGPVYKAQM----STGETVAVKVL--ATDSKQGE--KEFQTEVMLLGR 164
NF L +G GA+G V+ + TG+ A+KVL AT ++ + + +TE +L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 165 LHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARG 222
+ + + Y + + L+ +++ G L +HL E + +++++ ++
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF--TEHEVQIYVG-EIVLA 171
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD--KHAANIRGTFGYLD 280
LE+LH + I+RDIK NILLD + + DFGLS+E + D + A + GT Y+
Sbjct: 172 LEHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 281 PEYI--STRNFTKKSDVYSFGVLLFELIAGRSPL 312
P+ + K D +S GVL++EL+ G SP
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 6 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 65
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 66 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 121
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 122 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 178 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 230
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 116 FTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLV 171
+ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 12 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 71
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + V + + G L HL E + + ++ L+YLH +
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH--SE 127
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTRN 288
V++RD+K N++LD+ ++ DFGL +E + D A ++ GT YL PE + +
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAPEVLEDND 185
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ + D + GV+++E++ GR P
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 116 FTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLV 171
+ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 13 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 72
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + V + + G L HL E + + ++ L+YLH +
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH--SE 128
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTRN 288
V++RD+K N++LD+ ++ DFGL +E + D A ++ GT YL PE + +
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAPEVLEDND 186
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ + D + GV+++E++ GR P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 116 FTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLV 171
+ L+G+G FG V + +TG A+K+L + + E TE +L H L
Sbjct: 14 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 73
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV 231
L + V + + G L HL E + + ++ L+YLH +
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH--SE 129
Query: 232 PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR---GTFGYLDPEYISTRN 288
V++RD+K N++LD+ ++ DFGL +E + D A ++ GT YL PE + +
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAPEVLEDND 187
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ + D + GV+++E++ GR P
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 32/242 (13%)
Query: 89 GFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVK 142
G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+K
Sbjct: 4 GSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIK 55
Query: 143 VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGS 194
+ D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 56 KVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 111
Query: 195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-R 253
+A H +++++ + R L Y+H + HRDIK N+LLD +
Sbjct: 112 VARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLK 167
Query: 254 VADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPL 312
+ DFG +++ + + + + Y PE I ++T DV+S G +L EL+ G+
Sbjct: 168 LCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
Query: 313 QG 314
G
Sbjct: 228 PG 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 2 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 61
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 62 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 117
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 118 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 173
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 174 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 30/275 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
NF T + + G ++K + G + VKVL S + ++F E L H N++
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 173 LVGYC-AEKGQH-MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGA 230
++G C + H L+ + GSL + L++ + + V ALD ARG +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--T 129
Query: 231 VPPVIHRD-IKSSNILLDQSMRARV--ADFGLSREEMVDKHAANIRGTFGYLDPEYISTR 287
+ P+I R + S ++ +D+ AR+ AD S + +A ++ PE + +
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP------AWVAPEALQKK 183
Query: 288 ---NFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIF 344
+ +D +SF VLL+EL+ P + +L+ K E + + GI
Sbjct: 184 PEDTNRRSADXWSFAVLLWELVTREVP------FADLSNXEIGXKVALEGLRPTIPPGIS 237
Query: 345 DVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSR 379
V+ L C N P KRP IV +L +
Sbjct: 238 P-----HVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
F +G GAFG V+ + S+G +K + D Q E + E+ +L L H N++ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENY--GPLTWNLRVHIALDVARGLEYLHDGAV 231
+ +V G L + L+ + + L Y H V
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 232 PPVIHRDIKSSNILL-DQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+H+D+K NIL D S + ++ DFGL+ D+H+ N GT Y+ PE + R+
Sbjct: 146 ---VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE-VFKRD 201
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
T K D++S GV+++ L+ G P G
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTG 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G+G F V + + G A+K + +Q +E Q E + +H N++ LV
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 175 GYC----AEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHD 228
YC K + L+ F +G+L + + + LT + + + L + RGLE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGL----------SREEMVDKHAANIRGTFGY 278
HRD+K +NILL + + D G SR+ + + A R T Y
Sbjct: 153 KGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 279 LDPEYISTRN---FTKKSDVYSFGVLLFELIAGRSP 311
PE S ++ +++DV+S G +L+ ++ G P
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG G F V A + TGE VA+K++ ++ + +TE+ L L H+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
+ +V + G L ++ ++ L+ + + + Y+H HR
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQGYA---HR 132
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMVDK--HAANIRGTFGYLDPEYISTRNFT-KKSD 294
D+K N+L D+ + ++ DFGL + +K H G+ Y PE I +++ ++D
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEAD 192
Query: 295 VYSFGVLLFELIAGRSPL 312
V+S G+LL+ L+ G P
Sbjct: 193 VWSMGILLYVLMCGFLPF 210
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 8/194 (4%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG+G+ G V A + +G VAVK++ +Q + EV+++ H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ ++ F+ G+L + L + V + L YLH V IHRD
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQGV---IHRD 166
Query: 239 IKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPEYISTRNFTKKSDVYS 297
IKS +ILL R +++DFG + D + GT ++ PE IS + + D++S
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 298 FGVLLFELIAGRSP 311
G+++ E++ G P
Sbjct: 227 LGIMVIEMVDGEPP 240
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 41/241 (17%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGEKE-FQTEVMLLGRL 165
D + C +G+G FG V++A+ + A+K + +++ +E EV L +L
Sbjct: 6 DFEPIQC-----LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 60
Query: 166 HHRNLVNLVGYCAEKG-------QHMLVYVFMS-KGSLASHLYDENYGPLTWNLR----- 212
H +V EK VY+++ + +L D G T R
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGL-------SREEMV 265
+HI L +A +E+LH + +HRD+K SNI +V DFGL E+ V
Sbjct: 121 LHIFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 266 -------DKHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEY 318
+H + GT Y+ PE I +++ K D++S G++LFEL+ P ME
Sbjct: 178 LTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER 233
Query: 319 V 319
V
Sbjct: 234 V 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+S L + + L + +GL + H V +H
Sbjct: 74 IHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 129
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 190 IWSLGCIFAEMVTRRALFPG 209
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+S L + + L + +GL + H V +H
Sbjct: 74 IHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 129
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 130 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 190 IWSLGCIFAEMVTRRALFPG 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 38/273 (13%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQTEVMLLGR-LHHRNLVNLVGY 176
+G+GA+G V K + + +G+ +AVK + AT + Q +K ++ + R + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 177 CAEKGQHMLVYVFM--SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+G + M S + D+ + ++ IA+ + + LE+LH V
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQT-IPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI-RGTFGYLDPEYIST----RNF 289
IHRD+K SN+L++ + ++ DFG+S +VD A I G Y+ PE I+ + +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 290 TKKSDVYSFGVLLFELIAGR-------SPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ KSD++S G+ + EL R +P Q L + VE + E VD
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD----- 289
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+C+ + ++RP+ +++Q
Sbjct: 290 ------------FTSQCLKKNSKERPTYPELMQ 310
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH + I
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDL---I 156
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 215 WALGVLIYEMAAGYPPF 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGY 176
++ +G F VY+AQ + +G A+K L ++ ++ + EV + +L H N+V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 177 CA------EKGQ-HMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHD 228
+ + GQ L+ + KG L L E+ GPL+ + + I R ++++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFG--------------LSREEMVDKHAANIRG 274
PP+IHRD+K N+LL ++ DFG R +V++
Sbjct: 155 QK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR-NT 212
Query: 275 TFGYLDPEYIST-RNFT--KKSDVYSFGVLLFELIAGRSPLQ 313
T Y PE I NF +K D+++ G +L+ L + P +
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+S L + + L + +GL + H V +H
Sbjct: 73 IHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 128
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 189 IWSLGCIFAEMVTRRALFPG 208
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+S L + + L + +GL + H V +H
Sbjct: 72 IHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 127
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 188 IWSLGCIFAEMVTRRALFPG 207
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 17/256 (6%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 145
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFDVEELNE 351
D++S G +L E+++ R G +L + G G E D L+ I +++ N
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLN--HILGILGSPEQED--LNCIINLKARNY 261
Query: 352 VASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 262 LLSLPHK--NKVPWNR 275
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 12/227 (5%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYK-AQMSTGETVAVKV----LATD 147
S A IPE + +G+G F ++ + T E A K+ L
Sbjct: 2 SAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK 61
Query: 148 SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
Q EK E+ + L H+++V G+ + +V + SL L+
Sbjct: 62 PHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALT 119
Query: 208 TWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD- 266
R ++ + G +YLH V IHRD+K N+ L++ + ++ DFGL+ + D
Sbjct: 120 EPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 175
Query: 267 KHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ + GT Y+ PE +S + + + DV+S G +++ L+ G+ P +
Sbjct: 176 ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 41/271 (15%)
Query: 119 LIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKEF------QTEVMLLGRLH----H 167
L+G+G FG V+ T VA+KV+ + G EV LL ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEY 225
++ L+ + + MLV + + A L+D GPL V +++
Sbjct: 98 PGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 226 LHDGAVPPVIHRDIKSSNILLD-QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYI 284
H V +HRDIK NIL+D + A++ DFG S + D+ + GT Y PE+I
Sbjct: 155 CHSRGV---VHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWI 210
Query: 285 STRNF-TKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGI 343
S + + V+S G+LL++++ G P + +EI+++ L
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERD-----------------QEILEAELH-- 251
Query: 344 FDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
F + +L +C+ P RPS+ +I+
Sbjct: 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G + A + EYLH +I
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 184
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + + L + +GL + H V +H
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 129
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 190 IWSLGCIFAEMVTRRALFPG 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G GA+G V + TG A+K++ T S G EV +L +L H N++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDHPNIMKL 86
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
+ +K + LV G L + + + + + I V G YLH +
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHKHNI- 142
Query: 233 PVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
+HRD+K N+LL+ R ++ DFGLS V GT Y+ PE + + +
Sbjct: 143 --VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE-VLRKKY 199
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG 314
+K DV+S GV+L+ L+ G P G
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 98 ASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYK-AQMSTGETVAVKV----LATDSKQGE 152
A IPE + +G+G F ++ + T E A K+ L Q E
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR 212
K E+ + L H+++V G+ + +V + SL L+ R
Sbjct: 63 K-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 120
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAAN 271
++ + G +YLH V IHRD+K N+ L++ + ++ DFGL+ + D +
Sbjct: 121 YYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 272 IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ GT Y+ PE +S + + + DV+S G +++ L+ G+ P +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 149
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 264
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 265 YLLSLPHK--NKVPWNR 279
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
IG+G+FG V Q + T + A+K + E + E+ ++ L H LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
++ +V + G L HL +N +++ I ++ L+YL + + I
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFIC-ELVMALDYLQNQRI---I 137
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN---FTKK 292
HRD+K NILLD+ + DF ++ + + GT Y+ PE S+R ++
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 293 SDVYSFGVLLFELIAGRSP 311
D +S GV +EL+ GR P
Sbjct: 198 VDWWSLGVTAYELLRGRRP 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANV---LH 151
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 266
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 267 YLLSLPHK--NKVPWNR 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEF---QTEVMLLGRL-HHRNLVNL 173
+IG+G++ V ++ T A+KV+ + +++ QTE + + +H LV L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ + V +++ G L H+ + P + R + A +++ L YLH+ +
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLHERGI-- 142
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFGYLDPEYISTRNFTKK 292
I+RD+K N+LLD ++ D+G+ +E + + GT Y+ PE + ++
Sbjct: 143 -IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D ++ GVL+FE++AGRSP
Sbjct: 202 VDWWALGVLMFEMMAGRSPF 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D A T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 167
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 282
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 283 YLLSLPHK--NKVPWNR 297
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 98 ASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYK-AQMSTGETVAVKV----LATDSKQGE 152
A IPE + +G+G F ++ + T E A K+ L Q E
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR 212
K E+ + L H+++V G+ + +V + SL L+ R
Sbjct: 63 K-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 120
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAAN 271
++ + G +YLH V IHRD+K N+ L++ + ++ DFGL+ + D +
Sbjct: 121 YYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 272 IRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ GT Y+ PE +S + + + DV+S G +++ L+ G+ P +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 147
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 262
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 263 YLLSLPHK--NKVPWNR 277
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 30/229 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
++D+ K T + L+G+GA+ V A + G+ AVK++ + EV L +
Sbjct: 10 FEDMYKLT---SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 165 LH-HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR--VHIALDVAR 221
++N++ L+ + + + LV+ + GS+ +H+ + + +N R + DVA
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAA 122
Query: 222 GLEYLHDGAVPPVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIR----- 273
L++LH + HRD+K NIL + + ++ DF L ++ I
Sbjct: 123 ALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 274 ---GTFGYLDPEYISTRN-----FTKKSDVYSFGVLLFELIAGRSPLQG 314
G+ Y+ PE + + K+ D++S GV+L+ +++G P G
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D A T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 147
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNXIINLKARN 262
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 263 YLLSLPHK--NKVPWNR 277
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 151
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 266
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 267 YLLSLPHK--NKVPWNR 281
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 152
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 267
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 268 YLLSLPHK--NKVPWNR 282
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 147
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 262
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 263 YLLSLPHK--NKVPWNR 277
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 125
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 186 IWSLGCIFAEMVTRRALFPG 205
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G GA+G V + TG A+K++ T S G EV +L +L H N++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDHPNIMKL 69
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
+ +K + LV G L + + + + + I V G YLH
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHK---H 123
Query: 233 PVIHRDIKSSNILLDQSMR---ARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNF 289
++HRD+K N+LL+ R ++ DFGLS V GT Y+ PE + + +
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKY 182
Query: 290 TKKSDVYSFGVLLFELIAGRSPLQG 314
+K DV+S GV+L+ L+ G P G
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 155
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 216 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 270
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 271 YLLSLPHK--NKVPWNR 285
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 147
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 262
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 263 YLLSLPHK--NKVPWNR 277
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 125
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 186 IWSLGCIFAEMVTRRALFPG 205
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 151
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 266
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 267 YLLSLPHK--NKVPWNR 281
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 127
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 188 IWSLGCIFAEMVTRRALFPG 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 142
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D A T Y PE ++ ++ +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTV 200
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 201 DIWSVGCIMAELLTGRTLFPG 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 152
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 267
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 268 YLLSLPHK--NKVPWNR 282
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 153
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 214 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 268
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 269 YLLSLPHK--NKVPWNR 283
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 144
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 205 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 259
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 260 YLLSLPHK--NKVPWNR 274
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 151
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 266
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 267 YLLSLPHK--NKVPWNR 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + M TG A+K+L K+ + E +L ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 39/315 (12%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLAT-DSKQGEKEF 155
S SG+P + + + +G+G +G V++ GE VAVK+ ++ D K +E
Sbjct: 23 SGSGLPFLVQRTVARQI-TLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE- 79
Query: 156 QTEVMLLGRLHHRNLVNLVGYCA----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNL 211
TE+ L H N++ + Q L+ + GSL +L ++
Sbjct: 80 -TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS--- 135
Query: 212 RVHIALDVARGLEYLH-----DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD 266
+ I L +A GL +LH P + HRD+KS NIL+ ++ + +AD GL+
Sbjct: 136 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 195
Query: 267 KHAANI-----RGTFGYLDPEY------ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGL 315
+ ++ GT Y+ PE + + K+ D+++FG++L+E +A R G+
Sbjct: 196 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE-VARRMVSNGI 254
Query: 316 MEYVELAAMN-TEGKTGWEEI-----VDSRLDGI----FDVEELNEVASLAYKCVNRAPR 365
+E + + +E++ VD + I F L +A L +C + P
Sbjct: 255 VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPS 314
Query: 366 KRPSMRDIVQVLSRI 380
R + I + L++I
Sbjct: 315 ARLTALRIKKTLTKI 329
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 75 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 130
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 191 IWSLGCIFAEMVTRRALFPG 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 78 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 133
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 193
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 194 IWSLGCIFAEMVTRRALFPG 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 38/273 (13%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQTEVMLLGR-LHHRNLVNLVGY 176
+G+GA+G V K + + +G+ +AVK + AT + Q +K ++ + R + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 177 CAEKGQHMLVYVFM--SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+G + M S + D+ + ++ IA+ + + LE+LH V
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQT-IPEDILGKIAVSIVKALEHLHSKL--SV 131
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI-RGTFGYLDPEYIST----RNF 289
IHRD+K SN+L++ + ++ DFG+S +VD A +I G Y+ PE I+ + +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 290 TKKSDVYSFGVLLFELIAGR-------SPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ KSD++S G+ + EL R +P Q L + VE + E VD
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD----- 245
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+C+ + ++RP+ +++Q
Sbjct: 246 ------------FTSQCLKKNSKERPTYPELMQ 266
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 145
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 260
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 261 YLLSLPHK--NKVPWNR 275
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 129
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 190 IWSLGCIFAEMVTRRALFPG 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 128
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 189 IWSLGCIFAEMVTRRALFPG 208
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V ++ G + SHL G A + EYLH + I
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDL---I 156
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 215 WALGVLIYEMAAGYPPF 231
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 128
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 189 IWSLGCIFAEMVTRRALFPG 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 129
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 190 IWSLGCIFAEMVTRRALFPG 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEF---QTEVMLLGRL-HHRNLVNL 173
+IG+G++ V ++ T A+KV+ + +++ QTE + + +H LV L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ + V +++ G L H+ + P + R + A +++ L YLH+ +
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLHERGI-- 131
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFGYLDPEYISTRNFTKK 292
I+RD+K N+LLD ++ D+G+ +E + + GT Y+ PE + ++
Sbjct: 132 -IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 190
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D ++ GVL+FE++AGRSP
Sbjct: 191 VDWWALGVLMFEMMAGRSPF 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 127
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 188 IWSLGCIFAEMVTRRALFPG 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 128
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 189 IWSLGCIFAEMVTRRALFPG 208
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 46/278 (16%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
T +G GA+G V A +GE VA+K L+ S+ K E++LL + H N++ L+
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 175 GYCAEKG------QHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
LV FM + + +E L + + +GL+Y
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQM--------LKGLKY 159
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYI- 284
+H V +HRD+K N+ +++ ++ DFGL+R D T Y PE I
Sbjct: 160 IHSAGV---VHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEVIL 214
Query: 285 STRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVE--LAAMNTEGKTGWEEIVDSRLDG 342
S ++ + D++S G ++ E++ G++ +G +Y++ + G G E
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKG-KDYLDQLTQILKVTGVPGTEF-------- 265
Query: 343 IFDVEELNEVASLAY-KCVNRAPRKRPSMRDIVQVLSR 379
V++LN+ A+ +Y + + + PRK D Q+ R
Sbjct: 266 ---VQKLNDKAAKSYIQSLPQTPRK-----DFTQLFPR 295
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 125
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 186 IWSLGCIFAEMVTRRALFPG 205
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEF---QTEVMLLGRL-HHRNLVNL 173
+IG+G++ V ++ T A+KV+ + +++ QTE + + +H LV L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ + V +++ G L H+ + P + R + A +++ L YLH+ +
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLHERGI-- 127
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFGYLDPEYISTRNFTKK 292
I+RD+K N+LLD ++ D+G+ +E + + GT Y+ PE + ++
Sbjct: 128 -IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 186
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D ++ GVL+FE++AGRSP
Sbjct: 187 VDWWALGVLMFEMMAGRSPF 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 127
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 188 IWSLGCIFAEMVTRRALFPG 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 151
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 266
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 267 YLLSLPHK--NKVPWNR 281
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 184
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGATWTLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 75 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 130
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 191 IWSLGCIFAEMVTRRALFPG 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 125
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 186 IWSLGCIFAEMVTRRALFPG 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 127
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 188 IWSLGCIFAEMVTRRALFPG 207
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 12/222 (5%)
Query: 98 ASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYK-AQMSTGETVAVKV----LATDSKQGE 152
A IPE + +G+G F ++ + T E A K+ L Q E
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR 212
K E+ + L H+++V G+ + +V + SL L+ R
Sbjct: 61 K-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 118
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI 272
++ + G +YLH V IHRD+K N+ L++ + ++ DFGL+ + D +
Sbjct: 119 YYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 174
Query: 273 R-GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
GT Y+ PE +S + + + DV+S G +++ L+ G+ P +
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 78 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 133
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVD 193
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 194 IWSLGCIFAEMVTRRALFPG 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
+G+G F VYKA+ +T + VA+K + +++K G + E+ LL L H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L+ K LV+ FM + L + D + +++ ++ + + +GLEYLH +
Sbjct: 77 LLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL-QGLEYLHQHWI- 133
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-GTFGYLDPEYI-STRNFT 290
+HRD+K +N+LLD++ ++ADFGL++ A + T Y PE + R +
Sbjct: 134 --LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 291 KKSDVYSFGVLLFEL------IAGRSPLQGLMEYVELAAMNTEGKTGWEEI 335
D+++ G +L EL + G S L L E TE + W ++
Sbjct: 192 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ--WPDM 240
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEF---QTEVMLLGRL-HHRNLVNL 173
+IG+G++ V ++ T A++V+ + +++ QTE + + +H LV L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
+ + V +++ G L H+ + P + R + A +++ L YLH+ +
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLHERGI-- 174
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEM-VDKHAANIRGTFGYLDPEYISTRNFTKK 292
I+RD+K N+LLD ++ D+G+ +E + + GT Y+ PE + ++
Sbjct: 175 -IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 233
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D ++ GVL+FE++AGRSP
Sbjct: 234 VDWWALGVLMFEMMAGRSPF 253
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
+G+G + VYK + T VA+K + + ++G EV LL L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
+ LV+ ++ K L +L D N+++ + + RGL Y H V +HR
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHRQKV---LHR 124
Query: 238 DIKSSNILLDQSMRARVADFGLSREEMV-DKHAANIRGTFGYLDPE-YISTRNFTKKSDV 295
D+K N+L+++ ++ADFGL+R + + K N T Y P+ + + +++ + D+
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184
Query: 296 YSFGVLLFELIAGRSPLQG 314
+ G + +E+ GR G
Sbjct: 185 WGVGCIFYEMATGRPLFPG 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVNL 173
IG GA+G VYKA+ +G VA+K + + + T EV LL RL H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 174 VGYCA-----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ CA + + LV+ + + L ++L L + RGL++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+ +HRD+K NIL+ ++ADFGL+R A + T Y PE +
Sbjct: 131 NCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQST 187
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ D++S G + E+ R PL
Sbjct: 188 YATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + LY L+ + + + RGL+Y+H V +H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 167
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 282
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 283 YLLSLPHK--NKVPWNR 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 147
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNXIINLKARN 262
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 263 YLLSLPHK--NKVPWNR 277
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + QG
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG 56
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+ E+ ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY--- 176
IG+G +G V+ + GE VAVKV T +++ +TE+ + H N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFT-TEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 177 -CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAV---- 231
Q L+ + GSL +L L + +A GL +LH
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159
Query: 232 -PPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-----GTFGYLDPEYIS 285
P + HRD+KS NIL+ ++ +AD GL+ + + D + +I GT Y+ PE +
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD 219
Query: 286 ---TRNFTKK---SDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
RN + +D+YSFG++L+E +A R G++E +L
Sbjct: 220 ESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGGIVEEYQL 260
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + TG A+K+L K+ + E + ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V + G + SHL G + A + EYLH +I
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 164
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +VADFG ++ V + GT YL PE I ++ + K D
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 119/290 (41%), Gaps = 54/290 (18%)
Query: 119 LIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH--------- 167
++GQGAFG V KA+ + + K+ T+ K +EVMLL L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST--ILSEVMLLASLNHQYVVRYYAA 70
Query: 168 ----RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLT---WNLRVHIALDVA 220
RN V + +K + + G+L ++ EN W L I
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL---- 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIR-- 273
L Y+H + IHRD+K NI +D+S ++ DFGL++ +++ + N+
Sbjct: 127 EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 274 --------GTFGYLDPEYIS-TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAM 324
GT Y+ E + T ++ +K D+YS G++ FE+I P ME V +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 325 NTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
V FD ++ + ++ P KRP R ++
Sbjct: 241 LRS--------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+++DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIIISKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G A + EYLH +I
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 184
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYK-AQMSTGETVAVKV----LATDSKQGEKEF 155
IPE + +G+G F ++ + T E A K+ L Q EK
Sbjct: 30 IPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-M 88
Query: 156 QTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI 215
E+ + L H+++V G+ + +V + SL L+ R ++
Sbjct: 89 SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL 147
Query: 216 ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-G 274
+ G +YLH V IHRD+K N+ L++ + ++ DFGL+ + D + G
Sbjct: 148 R-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 203
Query: 275 TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
T Y+ PE +S + + + DV+S G +++ L+ G+ P +
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G A + EYLH +I
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLI 158
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 217 WALGVLIYEMAAGYPPF 233
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 46/278 (16%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
T +G GA+G V A +GE VA+K L+ S+ K E++LL + H N++ L+
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 175 GYCAEKG------QHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
LV FM + + +E L + + +GL+Y
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM--------LKGLKY 141
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYI- 284
+H V +HRD+K N+ +++ ++ DFGL+R D T Y PE I
Sbjct: 142 IHSAGV---VHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEVIL 196
Query: 285 STRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVE--LAAMNTEGKTGWEEIVDSRLDG 342
S ++ + D++S G ++ E++ G++ +G +Y++ + G G E
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKG-KDYLDQLTQILKVTGVPGTEF-------- 247
Query: 343 IFDVEELNEVASLAY-KCVNRAPRKRPSMRDIVQVLSR 379
V++LN+ A+ +Y + + + PRK D Q+ R
Sbjct: 248 ---VQKLNDKAAKSYIQSLPQTPRK-----DFTQLFPR 277
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYK-AQMSTGETVAVKV----LATDSKQGEKEF 155
IPE + +G+G F ++ + T E A K+ L Q EK
Sbjct: 28 IPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-M 86
Query: 156 QTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI 215
E+ + L H+++V G+ + +V + SL L+ R ++
Sbjct: 87 SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL 145
Query: 216 ALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIR-G 274
+ G +YLH V IHRD+K N+ L++ + ++ DFGL+ + D + G
Sbjct: 146 R-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 201
Query: 275 TFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
T Y+ PE +S + + + DV+S G +++ L+ G+ P +
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA++ ++ Q + E+ +L R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 151
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 266
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 267 YLLSLPHK--NKVPWNR 281
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + QG
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG 56
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+ E+ ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + QG
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG 56
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+ E+ ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRA-RVADFGLSRE 262
+++++ + R L Y+H + HRDIK N+LLD ++ DFG +++
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 263 EMVDKHAANIRGTFGYLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + + + Y PE I ++T DV+S G +L EL+ G+ G
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++++ AG P
Sbjct: 222 WALGVLIYQMAAGYPPF 238
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 109 LQKATCNFTTL---IGQGAFGPVYKAQMSTGETVAVKVLAT-DSKQGEKEFQTEVMLLGR 164
+Q+ + TL +G+G +G V++ GE VAVK+ ++ D K +E TE+
Sbjct: 2 MQRTVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVM 58
Query: 165 LHHRNLVNLVGYCA----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
L H N++ + Q L+ + GSL +L ++ + I L +A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIA 115
Query: 221 RGLEYLH-----DGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI--- 272
GL +LH P + HRD+KS NIL+ ++ + +AD GL+ + ++
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 273 --RGTFGYLDPEY------ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
GT Y+ PE + + K+ D+++FG++L+E +A R G++E
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE-VARRMVSNGIVE 227
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLAT-DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G+G +G V++ GE VAVK+ ++ D K +E TE+ L H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 179 ----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-----DG 229
Q L+ + GSL +L ++ + I L +A GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQ 129
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI-----RGTFGYLDPEY- 283
P + HRD+KS NIL+ ++ + +AD GL+ + ++ GT Y+ PE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 284 -----ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ + K+ D+++FG++L+E +A R G++E
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWE-VARRMVSNGIVE 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADI--- 142
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 201 DIWSVGCIMAELLTGRTLFPG 221
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVK-----VLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G+FG V A +TG+ VA+K VLA QG E E+ L L H +++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
K + ++V + + L ++ + ++ + +EY H +
Sbjct: 80 YDVIKSKDEIIMVIEY-AGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI-- 134
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KK 292
+HRD+K N+LLD+ + ++ADFGLS G+ Y PE IS + + +
Sbjct: 135 -VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 293 SDVYSFGVLLFELIAGRSPL 312
DV+S GV+L+ ++ R P
Sbjct: 194 VDVWSCGVILYVMLCRRLPF 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVK-----VLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G+FG V A +TG+ VA+K VLA QG E E+ L L H +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
K + ++V + + L ++ + ++ + +EY H +
Sbjct: 70 YDVIKSKDEIIMVIEY-AGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI-- 124
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KK 292
+HRD+K N+LLD+ + ++ADFGLS G+ Y PE IS + + +
Sbjct: 125 -VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 293 SDVYSFGVLLFELIAGRSPL 312
DV+S GV+L+ ++ R P
Sbjct: 184 VDVWSCGVILYVMLCRRLPF 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVK-----VLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G+FG V A +TG+ VA+K VLA QG E E+ L L H +++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
K + ++V + + L ++ + ++ + +EY H +
Sbjct: 79 YDVIKSKDEIIMVIEY-AGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI-- 133
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KK 292
+HRD+K N+LLD+ + ++ADFGLS G+ Y PE IS + + +
Sbjct: 134 -VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 293 SDVYSFGVLLFELIAGRSPL 312
DV+S GV+L+ ++ R P
Sbjct: 193 VDVWSCGVILYVMLCRRLPF 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+IG+GAFG V + ST + A+K+L+ K+ + F E + + V +
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 176 YCAEKGQHM-LVYVFMSKGSLASHLYDENYG-PLTWNLRVHIALDVARGLEYLHDGAVPP 233
Y + +++ +V +M G L + + NY P W R + A +V L+ +H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKW-ARFYTA-EVVLALDAIHSMGF-- 189
Query: 234 VIHRDIKSSNILLDQSMRARVADFG----LSREEMVDKHAANIRGTFGYLDPEYISTRN- 288
IHRD+K N+LLD+S ++ADFG +++E MV A GT Y+ PE + ++
Sbjct: 190 -IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGG 246
Query: 289 ---FTKKSDVYSFGVLLFELIAGRSPL 312
+ ++ D +S GV L+E++ G +P
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 15/224 (6%)
Query: 97 SASGIPEY----SYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG 151
+AS +P+Y S +D + +G+GA VY+ Q T + A+KVL +
Sbjct: 34 TASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK- 92
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNL 211
K +TE+ +L RL H N++ L + LV ++ G L + ++ Y +
Sbjct: 93 -KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERD 149
Query: 212 RVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQ---SMRARVADFGLSREEMVDKH 268
+ + YLH+ + +HRD+K N+L ++ADFGLS+
Sbjct: 150 AADAVKQILEAVAYLHENGI---VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206
Query: 269 AANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPL 312
+ GT GY PE + + + D++S G++ + L+ G P
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVK-----VLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G+FG V A +TG+ VA+K VLA QG E E+ L L H +++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
K + ++V + + L ++ + ++ + +EY H +
Sbjct: 74 YDVIKSKDEIIMVIEY-AGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI-- 128
Query: 234 VIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-KK 292
+HRD+K N+LLD+ + ++ADFGLS G+ Y PE IS + + +
Sbjct: 129 -VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 293 SDVYSFGVLLFELIAGRSPL 312
DV+S GV+L+ ++ R P
Sbjct: 188 VDVWSCGVILYVMLCRRLPF 207
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+IG+GAFG V + ST + A+K+L+ K+ + F E + + V +
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 176 YCAEKGQHM-LVYVFMSKGSLASHLYDENYG-PLTWNLRVHIALDVARGLEYLHDGAVPP 233
Y + +++ +V +M G L + + NY P W R + A +V L+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKW-ARFYTA-EVVLALDAIHSMGF-- 194
Query: 234 VIHRDIKSSNILLDQSMRARVADFG----LSREEMVDKHAANIRGTFGYLDPEYISTRN- 288
IHRD+K N+LLD+S ++ADFG +++E MV A GT Y+ PE + ++
Sbjct: 195 -IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGG 251
Query: 289 ---FTKKSDVYSFGVLLFELIAGRSPL 312
+ ++ D +S GV L+E++ G +P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 150
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+D+ +V DFG ++ V + GT YL PE I ++ + K D
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 209 WALGVLIYEMAAGYPPF 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+IG+GAFG V + ST + A+K+L+ K+ + F E + + V +
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 176 YCAEKGQHM-LVYVFMSKGSLASHLYDENYG-PLTWNLRVHIALDVARGLEYLHDGAVPP 233
Y + +++ +V +M G L + + NY P W R + A +V L+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKW-ARFYTA-EVVLALDAIHSMGF-- 194
Query: 234 VIHRDIKSSNILLDQSMRARVADFG----LSREEMVDKHAANIRGTFGYLDPEYISTRN- 288
IHRD+K N+LLD+S ++ADFG +++E MV A GT Y+ PE + ++
Sbjct: 195 -IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGG 251
Query: 289 ---FTKKSDVYSFGVLLFELIAGRSPL 312
+ ++ D +S GV L+E++ G +P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 156
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 214
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 215 DIWSVGCIMAELLTGRTLFPG 235
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 35/231 (15%)
Query: 106 YKDLQKATCNFTTL--------IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKE 154
+ +Q A FT L IG GA G V A G VAVK L+ ++ K
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 67
Query: 155 FQTEVMLLGRLHHRNLVNLVG-YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
E++LL ++H+N+++L+ + +K V+ L L D N + +
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY-----LVMELMDANLCQV-----I 117
Query: 214 HIALDVAR----------GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREE 263
H+ LD R G+++LH + IHRD+K SNI++ ++ DFGL+R
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA 174
Query: 264 MVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ T Y PE I + + D++S G ++ EL+ G QG
Sbjct: 175 STNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 166
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 224
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 225 DIWSVGCIMAELLTGRTLFPG 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 165
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 223
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 224 DIWSVGCIMAELLTGRTLFPG 244
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+ + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 126
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 187 IWSLGCIFAEMVTRRALFPG 206
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+ + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ F+ + L + + L + +GL + H V +H
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 125
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 186 IWSLGCIFAEMVTRRALFPG 205
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 166
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMHYNQTV 224
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 225 DIWSVGCIMAELLTGRTLFPG 245
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTE--VMLLGRLHHRNLVN-LVG 175
LIG+G +G VYK + VAVKV + ++Q F E + + + H N+ +VG
Sbjct: 20 LIGRGRYGAVYKGSLDE-RPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVG 75
Query: 176 ----YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH---- 227
+ +++LV + GSL +L + W +A V RGL YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 228 --DGAVPPVIHRDIKSSNILLDQSMRARVADFGLS---------REEMVDKHAANIRGTF 276
D P + HRD+ S N+L+ ++DFGLS R D A + GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 277 GYLDPEYI-------STRNFTKKSDVYSFGVLLFELI 306
Y+ PE + + K+ D+Y+ G++ +E+
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 152
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 211 DIWSVGCIMAELLTGRTLFPG 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 142
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 201 DIWSVGCIMAELLTGRTLFPG 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 151
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 210 DIWSVGCIMAELLTGRTLFPG 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 41/285 (14%)
Query: 116 FTTLIGQGAFGPVYKA---------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
F +GQG F ++K Q+ E V +KVL + + F ++ +L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEY 225
H++LV G C +++LV F+ GSL ++L ++N + W L V A +A + +
Sbjct: 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAAAMHF 128
Query: 226 LHDGAVPPVIHRDIKSSNILL--------DQSMRARVADFGLSREEMVDKHAANIRGTFG 277
L + +IH ++ + NILL +++D G+S ++ K R
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI-TVLPKDILQER--IP 182
Query: 278 YLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
++ PE I + +N +D +SFG L+E+ +G L+A++++ K + E
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK--------PLSALDSQRKLQFYEDR 234
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ E+A+L C++ P RPS R I++ L+ +
Sbjct: 235 HQ-----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVN 172
IG+GA+G V+KA+ + G VA+K + + + T EV +L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LVGYCA---EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH-IALDVARGLEYLHD 228
L C + L VF + D+ P + + + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
V +HRD+K NIL+ S + ++ADFGL+R ++ T Y PE + +
Sbjct: 139 HRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA----AMNTEGKTGWEEIVDSRLDG-- 342
+ D++S G + E+ + +G + +L + G+ W V
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 343 ----------IFDVEELNEVASLAYKCVNRAPRKRPS 369
+ D++EL + L KC+ P KR S
Sbjct: 256 SKSAQPIEKFVTDIDELGK--DLLLKCLTFNPAKRIS 290
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 19/257 (7%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 149
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 292 KSDVYSFGVLLFELIAGRSPLQGLMEYVELA-AMNTEGKTGWEEIVDSRLDGIFDVEELN 350
D++S G +L E+++ R G +L + G E+ L+ I +++ N
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-----LNCIINLKARN 264
Query: 351 EVASLAYKCVNRAPRKR 367
+ SL +K N+ P R
Sbjct: 265 YLLSLPHK--NKVPWNR 279
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT YL P I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPAIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 158
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 216
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 217 DIWSVGCIMAELLTGRTLFPG 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 25/269 (9%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD----SKQGEKEFQTEVMLLGRLHHRNL 170
F IG+G+F VYK + T TV V +K + F+ E L L H N+
Sbjct: 29 KFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNI 87
Query: 171 VNLVGYCAE--KGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
V KG+ +V V + G+L ++L + + + + +GL++L
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 227 HDGAVPPVIHRDIKSSNILLD-QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
H PP+IHRD+K NI + + ++ D GL+ + A + GT + PE
Sbjct: 146 HT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFXAPEXYE 203
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ + + DVY+FG E P ++ T G FD
Sbjct: 204 EK-YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVK----------PASFD 252
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIV 374
+ EV + C+ + +R S++D++
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G +G V+KA+ T E VA+K V D +G E+ LL L H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ LV+ F + +D G L + + +GL + H V +H
Sbjct: 70 LHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV---LH 124
Query: 237 RDIKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-STRNFTKKS 293
RD+K N+L++++ ++ADFGL+R V ++A + T Y P+ + + ++
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSI 183
Query: 294 DVYSFGVLLFELIAGRSPL 312
D++S G + EL PL
Sbjct: 184 DMWSAGCIFAELANAARPL 202
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 158
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 216
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 217 DIWSVGCIMAELLTGRTLFPG 237
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 158
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 216
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 217 DIWSVGCIMAELLTGRTLFPG 237
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGY 176
++G+GA V + T + AVK++ EV +L + HRN++ L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
E+ + LV+ M GS+ SH++ ++ L ++ V DVA L++LH+ +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKG---IA 133
Query: 236 HRDIKSSNILLD---QSMRARVADFGLSREEMVDKHAANIR--------GTFGYLDPEYI 284
HRD+K NIL + Q ++ DFGL ++ + I G+ Y+ PE +
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 285 STRN-----FTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + K+ D++S GV+L+ L++G P G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 148
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 207 DIWSVGCIMAELLTGRTLFPG 227
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVN 172
IG+GA+G V+KA+ + G VA+K + + + T EV +L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LVGYCA---EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH-IALDVARGLEYLHD 228
L C + L VF + D+ P + + + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
V +HRD+K NIL+ S + ++ADFGL+R ++ T Y PE + +
Sbjct: 139 HRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA----AMNTEGKTGWEEIVDSRLDG-- 342
+ D++S G + E+ + +G + +L + G+ W V
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 343 ----------IFDVEELNEVASLAYKCVNRAPRKRPS 369
+ D++EL + L KC+ P KR S
Sbjct: 256 SKSAQPIEKFVTDIDELGK--DLLLKCLTFNPAKRIS 290
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 148
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 207 DIWSVGCIMAELLTGRTLFPG 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 157
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 215
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 216 DIWSVGCIMAELLTGRTLFPG 236
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL-DVARGLEY 225
H N++ L LV+ M KG L +L ++ ++ AL +V L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
L+ ++HRD+K NILLD M ++ DFG S + + ++ GT YL PE I
Sbjct: 143 LN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIE 196
Query: 286 TR------NFTKKSDVYSFGVLLFELIAGRSPL----QGLMEYVELAAMNTEGKTGWEEI 335
+ K+ D++S GV+++ L+AG P Q LM + ++ G W++
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 256
Query: 336 VDSRLD 341
D+ D
Sbjct: 257 SDTVKD 262
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A +T VA+K ++ Q + E+ +L R H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANV---LH 167
Query: 237 RDIKSSNILLDQSMRARVADFGLSR----EEMVDKHAANIRGTFGYLDPE-YISTRNFTK 291
RD+K SN+L++ + ++ DFGL+R E T Y PE ++++ +TK
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK 227
Query: 292 KSDVYSFGVLLFELIAGRSPLQG 314
D++S G +L E+++ R G
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPG 250
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVY--------VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ + LV+ FM +L + L + +GL + H
Sbjct: 70 IHTENKLYLVFEHVHQDLKTFMDASALTG---------IPLPLIKSYLFQLLQGLAFCHS 120
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YIST 286
V +HRD+K N+L++ ++ADFGL+R V + + T Y PE +
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ ++ D++S G + E++ R+ G
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 151
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 210 DIWSVGCIMAELLTGRTLFPG 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 148
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 207 DIWSVGCIMAELLTGRTLFPG 227
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 145
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 203
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 204 DIWSVGCIMAELLTGRTLFPG 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVNL 173
IG GA+G VYKA+ +G VA+K + + + T EV LL RL H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 174 VGYCA-----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ CA + + LV+ + + L ++L L + RGL++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+ +HRD+K NIL+ ++ADFGL+R + T Y PE +
Sbjct: 131 NCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQST 187
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ D++S G + E+ R PL
Sbjct: 188 YATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVN 172
IG+GA+G V+KA+ + G VA+K + + + T EV +L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LVGYCA---EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH-IALDVARGLEYLHD 228
L C + L VF + D+ P + + + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
V +HRD+K NIL+ S + ++ADFGL+R ++ T Y PE + +
Sbjct: 139 HRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELA----AMNTEGKTGWEEIVDSRLDG-- 342
+ D++S G + E+ + +G + +L + G+ W V
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 343 ----------IFDVEELNEVASLAYKCVNRAPRKRPS 369
+ D++EL + L KC+ P KR S
Sbjct: 256 SKSAQPIEKFVTDIDELGK--DLLLKCLTFNPAKRIS 290
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 153
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 211
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 212 DIWSVGCIMAELLTGRTLFPG 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 157
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 215
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 216 DIWSVGCIMAELLTGRTLFPG 236
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 143
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 201
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 202 DIWSVGCIMAELLTGRTLFPG 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 38/248 (15%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+K+++ +++ + +TE+ +L +L+H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA------LDVARGLE 224
+ + + + + +V M G L+D+ G N R+ A + ++
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVG----NKRLKEATCKLYFYQMLLAVQ 128
Query: 225 YLHDGAVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
YLH+ + IHRD+K N+LL ++ ++ DFG S+ + GT YL P
Sbjct: 129 YLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 282 EY---ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WE 333
E + T + + D +S GV+LF ++G P V L T GK W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 334 EIVDSRLD 341
E+ + LD
Sbjct: 246 EVSEKALD 253
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVNL 173
IG GA+G VYKA+ +G VA+K + + + T EV LL RL H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 174 VGYCA-----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
+ CA + + LV+ + + L ++L L + RGL++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+ +HRD+K NIL+ ++ADFGL+R + T Y PE +
Sbjct: 131 NCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQST 187
Query: 289 FTKKSDVYSFGVLLFELIAGRSPL 312
+ D++S G + E+ R PL
Sbjct: 188 YATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+K+++ +++ + +TE+ +L +L+H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + + + + +V M G L + ++ T L + L ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 133
Query: 230 AVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY--- 283
+ IHRD+K N+LL ++ ++ DFG S+ + GT YL PE
Sbjct: 134 GI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 284 ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDS 338
+ T + + D +S GV+LF ++G P V L T GK W E+ +
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 339 RLD 341
LD
Sbjct: 251 ALD 253
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 152
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 211 DIWSVGCIMAELLTGRTLFPG 231
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 38/248 (15%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+K+++ +++ + +TE+ +L +L+H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA------LDVARGLE 224
+ + + + + +V M G L+D+ G N R+ A + ++
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVG----NKRLKEATCKLYFYQMLLAVQ 127
Query: 225 YLHDGAVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
YLH+ + IHRD+K N+LL ++ ++ DFG S+ + GT YL P
Sbjct: 128 YLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 282 EY---ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WE 333
E + T + + D +S GV+LF ++G P V L T GK W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 334 EIVDSRLD 341
E+ + LD
Sbjct: 245 EVSEKALD 252
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 151
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 210 DIWSVGCIMAELLTGRTLFPG 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 143
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 201
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 202 DIWSVGCIMAELLTGRTLFPG 222
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+K+++ +++ + +TE+ +L +L+H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + + + + +V M G L + ++ T L + L ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 133
Query: 230 AVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY--- 283
+ IHRD+K N+LL ++ ++ DFG S+ + GT YL PE
Sbjct: 134 GI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 284 ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDS 338
+ T + + D +S GV+LF ++G P V L T GK W E+ +
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 339 RLD 341
LD
Sbjct: 251 ALD 253
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 165
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 223
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 224 DIWSVGCIMAELLTGRTLFPG 244
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 169
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 227
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 228 DIWSVGCIMAELLTGRTLFPG 248
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 151
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 210 DIWSVGCIMAELLTGRTLFPG 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL-DVARGLEY 225
H N++ L LV+ M KG L +L ++ ++ AL +V L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
L+ ++HRD+K NILLD M ++ DFG S + + + GT YL PE I
Sbjct: 143 LN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 196
Query: 286 TR------NFTKKSDVYSFGVLLFELIAGRSPL----QGLMEYVELAAMNTEGKTGWEEI 335
+ K+ D++S GV+++ L+AG P Q LM + ++ G W++
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 256
Query: 336 VDSRLD 341
D+ D
Sbjct: 257 SDTVKD 262
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 142
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 201 DIWSVGCIMAELLTGRTLFPG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 169
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMHYNQTV 227
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 228 DIWSVGCIMAELLTGRTLFPG 248
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 166
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 224
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 225 DIWSVGCIMAELLTGRTLFPG 245
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL-DVARGLEY 225
H N++ L LV+ M KG L +L ++ ++ AL +V L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
L+ ++HRD+K NILLD M ++ DFG S + + + GT YL PE I
Sbjct: 130 LN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 183
Query: 286 TR------NFTKKSDVYSFGVLLFELIAGRSPL----QGLMEYVELAAMNTEGKTGWEEI 335
+ K+ D++S GV+++ L+AG P Q LM + ++ G W++
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 243
Query: 336 VDSRLD 341
D+ D
Sbjct: 244 SDTVKD 249
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 38/248 (15%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+K+++ +++ + +TE+ +L +L+H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA------LDVARGLE 224
+ + + + + +V M G L+D+ G N R+ A + ++
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVG----NKRLKEATCKLYFYQMLLAVQ 134
Query: 225 YLHDGAVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDP 281
YLH+ + IHRD+K N+LL ++ ++ DFG S+ + GT YL P
Sbjct: 135 YLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 282 EY---ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WE 333
E + T + + D +S GV+LF ++G P V L T GK W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 334 EIVDSRLD 341
E+ + LD
Sbjct: 252 EVSEKALD 259
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+IG+G F V + TG+ AVK++ + ++ + E + L H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGA 230
L+ + G +V+ FM L + ++ V H + L Y HD
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 231 VPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIR-GTFGYLDPEYIST 286
+ IHRD+K +LL + S ++ FG++ + A R GT ++ PE +
Sbjct: 153 I---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 209
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ K DV+ GV+LF L++G P G E
Sbjct: 210 EPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 144
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 202
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 203 DIWSVGCIMAELLTGRTLFPG 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 152
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 211 DIWSVGCIMAELLTGRTLFPG 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 41/285 (14%)
Query: 116 FTTLIGQGAFGPVYKA---------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
F +GQG F ++K Q+ E V +KVL + + F ++ +L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEY 225
H++LV G C +++LV F+ GSL ++L ++N + W L V A +A + +
Sbjct: 71 HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAWAMHF 128
Query: 226 LHDGAVPPVIHRDIKSSNILL--------DQSMRARVADFGLSREEMVDKHAANIRGTFG 277
L + +IH ++ + NILL +++D G+S ++ K R
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI-TVLPKDILQER--IP 182
Query: 278 YLDPEYI-STRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIV 336
++ PE I + +N +D +SFG L+E+ +G L+A++++ K + E
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK--------PLSALDSQRKLQFYEDR 234
Query: 337 DSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRIL 381
+ E+A+L C++ P RPS R I++ L+ +
Sbjct: 235 HQ-----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 106 YKDLQKATCNFTTL--------IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKE 154
+ ++ A FT L IG GA G V A G VAVK L+ ++ K
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 155 FQTEVMLLGRLHHRNLVNLVG-YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
E++LL ++H+N+++L+ + +K V+ L L D N + +
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY-----LVMELMDANLCQV-----I 119
Query: 214 HIALDVAR----------GLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREE 263
H+ LD R G+++LH + IHRD+K SNI++ ++ DFGL+R
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 264 MVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+ T Y PE I + D++S G ++ EL+ G QG
Sbjct: 177 CTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQG 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 152
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 211 DIWSVGCIMAELLTGRTLFPG 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 148
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D T Y PE ++ ++ +
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 207 DIWSVGCIMAELLTGRTLFPG 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETV-AVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNL 170
+ +IG+GAFG V + + V A+K+L+ + F E ++ + +
Sbjct: 78 DVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV 137
Query: 171 VNLVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYG-PLTWNLRVHIALDVARGLEYLH 227
V L +CA + L V +M G L + + NY P W + + A +V L+ +H
Sbjct: 138 VQL--FCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKW-AKFYTA-EVVLALDAIH 191
Query: 228 DGAVPPVIHRDIKSSNILLDQSMRARVADFG--LSREEMVDKHAANIRGTFGYLDPEYIS 285
+ IHRD+K N+LLD+ ++ADFG + +E H GT Y+ PE +
Sbjct: 192 SMGL---IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 286 TRN----FTKKSDVYSFGVLLFELIAGRSPL 312
++ + ++ D +S GV LFE++ G +P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+IG+G F V + TG+ AVK++ + ++ + E + L H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGA 230
L+ + G +V+ FM L + ++ V H + L Y HD
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 231 VPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIR-GTFGYLDPEYIST 286
+ IHRD+K +LL + S ++ FG++ + A R GT ++ PE +
Sbjct: 151 I---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ K DV+ GV+LF L++G P G E
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
+G G+FG V + +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +V +++ G + SHL G + A + EYLH +I
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLI 163
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
+RD+K N+L+DQ +V DFG ++ V + GT L PE I ++ + K D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEALAPEIILSKGYNKAVDW 221
Query: 296 YSFGVLLFELIAGRSPL 312
++ GVL++E+ AG P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV---HIAL---DVARGLEYLHDG 229
+ + V+ L +HL + + + ++ H+ + RGL+Y+H
Sbjct: 90 FTPARSLEEFNDVY-----LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 230 AVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRN 288
+ IHRD+K SN+ +++ ++ DFGL R D T Y PE ++ +
Sbjct: 145 DI---IHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + D++S G ++ EL+ GR+ G
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ + LV+ + + L + + L + +GL + H V +H
Sbjct: 74 IHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 129
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTRNFTKKSD 294
RD+K N+L++ ++ADFGL+R V + + T Y PE + + ++ D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 295 VYSFGVLLFELIAGRSPLQG 314
++S G + E++ R+ G
Sbjct: 190 IWSLGCIFAEMVTRRALFPG 209
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + + S++G +E + EV +L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L + +L+ +S G L L + L+ + G+ YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ ++ DFGL+ E NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
++D++S GV+ + L++G SP G
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLG 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 54/290 (18%)
Query: 119 LIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH--------- 167
++GQGAFG V KA+ + + K+ T+ K +EVMLL L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST--ILSEVMLLASLNHQYVVRYYAA 70
Query: 168 ----RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLT---WNLRVHIALDVA 220
RN V + +K + + +L ++ EN W L I
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---- 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIR-- 273
L Y+H + IHRD+K NI +D+S ++ DFGL++ +++ + N+
Sbjct: 127 EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 274 --------GTFGYLDPEYIS-TRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAM 324
GT Y+ E + T ++ +K D+YS G++ FE+I P ME V +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 325 NTEGKTGWEEIVDSRLDGIFDVEELNEVASLAYKCVNRAPRKRPSMRDIV 374
V FD ++ + ++ P KRP R ++
Sbjct: 241 LRS--------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ D+GL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+++++ +++ + +TE+ +L +L+H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + + + + +V M G L + ++ T L + L ++YLH+
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 258
Query: 230 AVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY--- 283
+ IHRD+K N+LL ++ ++ DFG S+ + GT YL PE
Sbjct: 259 GI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315
Query: 284 ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDS 338
+ T + + D +S GV+LF ++G P V L T GK W E+ +
Sbjct: 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 375
Query: 339 RLD 341
LD
Sbjct: 376 ALD 378
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + + S++G +E + EV +L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L + +L+ +S G L L + L+ + G+ YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ ++ DFGL+ E NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
++D++S GV+ + L++G SP G
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 45/218 (20%)
Query: 120 IGQGAFGPV---YKAQMSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGRLHH 167
+G GA+G V Y A++ + VAVK L+ + FQ+ E+ LL L H
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLS-------RPFQSLIHARRTYRELRLLKHLKH 78
Query: 168 RNLVNLVGY------CAEKGQHMLVYVFMSKG----SLASHLYDENYGPLTWNLRVHIAL 217
N++ L+ + + LV M L DE+ L + L
Sbjct: 79 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL------ 132
Query: 218 DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG 277
RGL+Y+H + IHRD+K SN+ +++ R+ DFGL+R+ D+ T
Sbjct: 133 --LRGLKYIHSAGI---IHRDLKPSNVAVNEDCELRILDFGLARQ--ADEEMTGYVATRW 185
Query: 278 YLDPE-YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
Y PE ++ ++ + D++S G ++ EL+ G++ G
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + + S++G +E + EV +L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L + +L+ +S G L L + L+ + G+ YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ ++ DFGL+ E NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
++D++S GV+ + L++G SP G
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLG 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + + S++G +E + EV +L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L + +L+ +S G L L + L+ + G+ YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ ++ DFGL+ E NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
++D++S GV+ + L++G SP G
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + + S++G +E + EV +L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L + +L+ +S G L L + L+ + G+ YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ ++ DFGL+ E NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
++D++S GV+ + L++G SP G
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 45/218 (20%)
Query: 120 IGQGAFGPV---YKAQMSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGRLHH 167
+G GA+G V Y A++ + VAVK L+ + FQ+ E+ LL L H
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLS-------RPFQSLIHARRTYRELRLLKHLKH 86
Query: 168 RNLVNLVGY------CAEKGQHMLVYVFMSKG----SLASHLYDENYGPLTWNLRVHIAL 217
N++ L+ + + LV M + L DE+ L + L
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL------ 140
Query: 218 DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG 277
RGL+Y+H + IHRD+K SN+ +++ R+ DFGL+R+ D+ T
Sbjct: 141 --LRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRW 193
Query: 278 YLDPE-YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
Y PE ++ ++ + D++S G ++ EL+ G++ G
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
IG+GA+G V A + + VA+K ++ Q + E+ +L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ V++ + + + LY L+ + + + RGL+Y+H V +H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---LH 149
Query: 237 RDIKSSNILLDQSMRARVADFGLSREEMVD-KHAANIR---GTFGYLDPE-YISTRNFTK 291
RD+K SN+LL+ + ++ DFGL+R D H + T Y PE ++++ +TK
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 292 KSDVYSFGVLLFELIAGRSPLQG 314
D++S G +L E+++ R G
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEF--QTEVMLLGRLHHRNL 170
+G GA G V A + T + VA+++++ +++ + +TE+ +L +L+H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLHDG 229
+ + + + + +V M G L + ++ T L + L ++YLH+
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 272
Query: 230 AVPPVIHRDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY--- 283
+ IHRD+K N+LL ++ ++ DFG S+ + GT YL PE
Sbjct: 273 GI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 329
Query: 284 ISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTG-----WEEIVDS 338
+ T + + D +S GV+LF ++G P V L T GK W E+ +
Sbjct: 330 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 389
Query: 339 RLD 341
LD
Sbjct: 390 ALD 392
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYC 177
+G+G+F K + + AVK++ SK+ E Q E+ L H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
++ LV ++ G L + + + + +I + + ++HD V +HR
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGV---VHR 130
Query: 238 DIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRG-TFGYLDPEYISTRNFTKKS 293
D+K N+L + ++ ++ DFG +R + D T Y PE ++ + +
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 294 DVYSFGVLLFELIAGRSPLQ 313
D++S GV+L+ +++G+ P Q
Sbjct: 191 DLWSLGVILYTMLSGQVPFQ 210
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL----ATDSKQG--EKEFQTEVMLLGRLHHRNLVN 172
+G G F V K + STG A K + + S++G +E + EV +L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L + +L+ +S G L L + L+ + G+ YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 233 PVIHRDIKSSNI-LLDQSM---RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
H D+K NI LLD+++ ++ DFGL+ E NI GT ++ PE ++
Sbjct: 138 ---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 289 FTKKSDVYSFGVLLFELIAGRSPLQG 314
++D++S GV+ + L++G SP G
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 153
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D+ + T Y PE ++ ++ +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV-ATRWYRAPEIMLNWMHYNQTV 211
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 212 DIWSVGCIMAELLTGRTLFPG 232
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G +G V+KA+ T E VA+K V D +G E+ LL L H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ LV+ F + +D G L + + +GL + H V +H
Sbjct: 70 LHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV---LH 124
Query: 237 RDIKSSNILLDQSMRARVADFGLSREE--MVDKHAANIRGTFGYLDPEYI-STRNFTKKS 293
RD+K N+L++++ ++A+FGL+R V ++A + T Y P+ + + ++
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSI 183
Query: 294 DVYSFGVLLFELIAGRSPL 312
D++S G + EL PL
Sbjct: 184 DMWSAGCIFAELANAGRPL 202
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 45/218 (20%)
Query: 120 IGQGAFGPV---YKAQMSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGRLHH 167
+G GA+G V Y A++ + VAVK L+ + FQ+ E+ LL L H
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLS-------RPFQSLIHARRTYRELRLLKHLKH 86
Query: 168 RNLVNLVGY------CAEKGQHMLVYVFMSKG----SLASHLYDENYGPLTWNLRVHIAL 217
N++ L+ + + LV M L DE+ L + L
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL------ 140
Query: 218 DVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFG 277
RGL+Y+H + IHRD+K SN+ +++ R+ DFGL+R+ D+ T
Sbjct: 141 --LRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRW 193
Query: 278 YLDPE-YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
Y PE ++ ++ + D++S G ++ EL+ G++ G
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 153
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D+ + T Y PE ++ ++ +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV-ATRWYRAPEIMLNWMHYNQTV 211
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 212 DIWSVGCIMAELLTGRTLFPG 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 153
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DFGL+R D+ + T Y PE ++ ++ +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV-ATRWYRAPEIMLNWMHYNQTV 211
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 212 DIWSVGCIMAELLTGRTLFPG 232
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ DF L+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 10/203 (4%)
Query: 115 NFTTLIGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+F IG G FG T E VAVK + + E Q E++ L H N+V
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRF 81
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPP 233
++ + S G L + N G + + + G+ Y H +
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERIC--NAGRFSEDEARFFFQQLLSGVSYCHSMQI-- 137
Query: 234 VIHRDIKSSNILLDQSM--RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTK 291
HRD+K N LLD S R ++ DFG S+ ++ + GT Y+ PE + + +
Sbjct: 138 -CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196
Query: 292 K-SDVYSFGVLLFELIAGRSPLQ 313
K +DV+S GV L+ ++ G P +
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFE 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGY 176
++G+GA V + T + AVK++ EV +L + HRN++ L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
E+ + LV+ M GS+ SH++ ++ L ++ V DVA L++LH+ +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKG---IA 133
Query: 236 HRDIKSSNILLD---QSMRARVADFGLSREEMVDKHAANIR--------GTFGYLDPEYI 284
HRD+K NIL + Q ++ DF L ++ + I G+ Y+ PE +
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 285 STRN-----FTKKSDVYSFGVLLFELIAGRSPLQG 314
+ + K+ D++S GV+L+ L++G P G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT-----EVMLLGRLH---HRNL 170
IG GA+G VYKA+ +G VA+K + + G EV LL RL H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 171 VNLVGYCA-----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
V L+ CA + + LV+ + + L ++L L + RGL++
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
LH + +HRD+K NIL+ ++ADFGL+R + T Y PE +
Sbjct: 136 LHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL 192
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPL 312
+ D++S G + E+ R PL
Sbjct: 193 QSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC- 177
+IG G+FG V++A++ + VA+K + D + +E Q ++ + H N+V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ----IMRIVKHPNVVDLKAFFY 102
Query: 178 --AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----ALDVARGLEYLHDGAV 231
+K + + + + + +Y L + + + + R L Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG- 161
Query: 232 PPVIHRDIKSSNILLD-QSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYI-STRNF 289
+ HRDIK N+LLD S ++ DFG ++ + + + + Y PE I N+
Sbjct: 162 --ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNY 219
Query: 290 TKKSDVYSFGVLLFELIAGRSPL----QGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
T D++S G ++ EL+ G+ PL G+ + VE+ + G E+I ++ +
Sbjct: 220 TTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQLVEI--IKVLGTPSREQI--KTMNPNYM 274
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDIVQVLSRILK 382
+ ++ + V R PR P D + ++SR+L+
Sbjct: 275 EHKFPQIRPHPFSKVFR-PRTPP---DAIDLISRLLE 307
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 38/273 (13%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQTEVMLLGR-LHHRNLVNLVGY 176
+G+GA+G V K + + +G+ AVK + AT + Q +K ++ + R + V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 177 CAEKGQHMLVYVF--MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+G + S + D+ + ++ IA+ + + LE+LH V
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQT-IPEDILGKIAVSIVKALEHLHSKL--SV 158
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI-RGTFGYLDPEYIST----RNF 289
IHRD+K SN+L++ + + DFG+S +VD A +I G Y PE I+ + +
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISG-YLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 290 TKKSDVYSFGVLLFELIAGR-------SPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDG 342
+ KSD++S G+ EL R +P Q L + VE + E VD
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD----- 272
Query: 343 IFDVEELNEVASLAYKCVNRAPRKRPSMRDIVQ 375
+C+ + ++RP+ ++ Q
Sbjct: 273 ------------FTSQCLKKNSKERPTYPELXQ 293
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ FGL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 213 VHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI 272
+HI + +A +E+LH + +HRD+K SNI +V DFGL D+ +
Sbjct: 167 LHIFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 273 R-------------GTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRS 310
GT Y+ PE I N++ K D++S G++LFEL+ S
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G++G V+K + TG+ VA+K + D +K E+ +L +L H NLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
K + LV+ + L H D + +L I + + + H IH
Sbjct: 71 FRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC---IH 125
Query: 237 RDIKSSNILLDQSMRARVADFGLSR-----EEMVDKHAANIRGTFGYLDPE-YISTRNFT 290
RD+K NIL+ + ++ DFG +R + D A T Y PE + +
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA----TRWYRSPELLVGDTQYG 181
Query: 291 KKSDVYSFGVLLFELIAG 308
DV++ G + EL++G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE-----------KEFQTEVMLLGRLHH 167
I G++G V S G VA+K + G K E+ LL HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 168 RNLVNL---VGYCAEKGQHMLVYVF-MSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
N++ L + E H L V + + LA ++D+ +++ + + GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ-YFMYHILLGL 147
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY 283
LH+ V +HRD+ NILL + + DF L+RE+ D + + Y PE
Sbjct: 148 HVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 284 I-STRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
+ + FTK D++S G ++ E+ ++ +G Y +L
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G GA+G V + + +G +AVK L+ S K E+ LL + H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 117
Query: 177 CAEKGQHMLVYVFMSKGSL--------ASHLYDENYG------PLTWNLRVHIALDVARG 222
VF SL +HL + LT + + + RG
Sbjct: 118 -----------VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 223 LEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE 282
L+Y+H + IHRD+K SN+ +++ ++ DFGL+R D T Y PE
Sbjct: 167 LKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPE 221
Query: 283 -YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
++ ++ D++S G ++ EL+ GR+ G
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE-----------KEFQTEVMLLGRLHH 167
I G++G V S G VA+K + G K E+ LL HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 168 RNLVNL---VGYCAEKGQHMLVYVF-MSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
N++ L + E H L V + + LA ++D+ +++ + + GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ-YFMYHILLGL 147
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY 283
LH+ V +HRD+ NILL + + DF L+RE+ D + + Y PE
Sbjct: 148 HVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 284 I-STRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVEL 321
+ + FTK D++S G ++ E+ ++ +G Y +L
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ D GL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 119 LIGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+ GQG FG V + STG +VA+K + D + +E Q + L LHH N+V L Y
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYF 88
Query: 178 AEKGQH---------MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
G+ ++ YV + + Y P ++V + + R + LH
Sbjct: 89 YTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL-FQLIRSIGCLHL 147
Query: 229 GAVPPVIHRDIKSSNILLDQS-MRARVADFGLSRE-EMVDKHAANIRGTFGYLDPEYI-S 285
+V V HRDIK N+L++++ ++ DFG +++ + + A I + Y PE I
Sbjct: 148 PSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPELIFG 205
Query: 286 TRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
+++T D++S G + E++ G +G
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G++ + +T AVKV+ + +E + +LL H N++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKD-VY 90
Query: 179 EKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
+ G+H+ LV M G L + + + + + + + +EYLH V +HR
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQGV---VHR 145
Query: 238 DIKSSNIL-LDQSMRA---RVADFGLSREE-------MVDKHAANIRGTFGYLDPEYIST 286
D+K SNIL +D+S R+ DFG +++ M + AN ++ PE +
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN------FVAPEVLKR 199
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPL 312
+ + + D++S G+LL+ ++AG +P
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ D GL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 120 IGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G FG + E VAVK + K E + E++ L H N+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVIL 84
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+V + S G L + N G + + + G+ Y H V HRD
Sbjct: 85 TPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQV---CHRD 139
Query: 239 IKSSNILLDQSM--RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKK-SDV 295
+K N LLD S R ++ DFG S+ ++ + GT Y+ PE + + + K +DV
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 199
Query: 296 YSFGVLLFELIAGRSPLQ 313
+S GV L+ ++ G P +
Sbjct: 200 WSCGVTLYVMLVGAYPFE 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G++ + +T AVKV+ + +E + +LL H N++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKD-VY 90
Query: 179 EKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
+ G+H+ LV M G L + + + + + + + +EYLH V +HR
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQGV---VHR 145
Query: 238 DIKSSNIL-LDQSMRA---RVADFGLSREE-------MVDKHAANIRGTFGYLDPEYIST 286
D+K SNIL +D+S R+ DFG +++ M + AN ++ PE +
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN------FVAPEVLKR 199
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPL 312
+ + + D++S G+LL+ ++AG +P
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
+G GA+G V A TG VAVK L+ S K E+ LL + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ + V++ + + L + LT + + + RGL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI--- 146
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPE-YISTRNFTKKS 293
IHRD+K SN+ +++ ++ D GL+R D T Y PE ++ ++ +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 294 DVYSFGVLLFELIAGRSPLQG 314
D++S G ++ EL+ GR+ G
Sbjct: 205 DIWSVGCIMAELLTGRTLFPG 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKE------FQTEVMLLGRLHHRNLVN 172
+G+G+FG V A T + VA+K + S+Q K+ + E+ L L H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFI---SRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVP 232
L ++V + + G L ++ ++ +T + + +EY H +
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKI- 129
Query: 233 PVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFT-K 291
+HRD+K N+LLD ++ ++ADFGLS G+ Y PE I+ + +
Sbjct: 130 --VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 292 KSDVYSFGVLLFELIAGRSPL 312
+ DV+S G++L+ ++ GR P
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPF 208
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 34/254 (13%)
Query: 98 ASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA--QMSTGETVAVKVLATDSKQGEKEF 155
A G Y D + + +G+G FG V + G VA+K++ K E
Sbjct: 19 AEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAA- 77
Query: 156 QTEVMLLGRLHHRN------LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTW 209
+ E+ +L +++ ++ V + + G HM + + S L D NY P
Sbjct: 78 RLEINVLEKINEKDPDNKNLCVQMFDWFDYHG-HMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 210 NLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLD-------------------QSM 250
+ H+A + + +++LHD + H D+K NIL +S
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKL---THTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 251 RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVLLFELIAGRS 310
RV DFG + + +H + I T Y PE I +++ DV+S G ++FE G +
Sbjct: 194 AVRVVDFGSATFD--HEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFT 251
Query: 311 PLQGLMEYVELAAM 324
Q LA M
Sbjct: 252 LFQTHDNREHLAMM 265
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 120 IGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G FG E VAVK + K E + E++ L H N+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVIL 85
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+V + S G L + N G + + + G+ Y H V HRD
Sbjct: 86 TPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYAHAMQV---AHRD 140
Query: 239 IKSSNILLDQSM--RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKK-SDV 295
+K N LLD S R ++ADFG S+ ++ + GT Y+ PE + + + K +DV
Sbjct: 141 LKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 296 YSFGVLLFELIAGRSPLQ 313
+S GV L+ ++ G P +
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 128 VYKAQMSTGETVAVKVLATDSKQGEKEFQT----EVMLLGRLHHRNLVNLVGYCAEKGQH 183
VY+A+ + E + L +++ + F+T E GRL ++V + + GQ
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSN 243
+ ++ LA+ L GPL V I + L+ H HRD+K N
Sbjct: 110 YVDXRLINGVDLAAXL--RRQGPLAPPRAVAIVRQIGSALDAAHAAGA---THRDVKPEN 164
Query: 244 ILLDQSMRARVADFGLSREEMVDK--HAANIRGTFGYLDPEYISTRNFTKKSDVYSFGVL 301
IL+ A + DFG++ +K N GT Y PE S + T ++D+Y+ +
Sbjct: 165 ILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCV 224
Query: 302 LFELIAGRSPLQGLMEYVELAAMN 325
L+E + G P QG V A +N
Sbjct: 225 LYECLTGSPPYQGDQLSVXGAHIN 248
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 120 IGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEK---EFQTEVMLLGRLHHRNLVNLVG 175
IG G FG + E VAVK + ++GEK + E++ L H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI----ERGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+V + S G L + N G + + + G+ Y H V
Sbjct: 83 VILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQV---C 137
Query: 236 HRDIKSSNILLDQSM--RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKK- 292
HRD+K N LLD S R ++ DFG S+ ++ + GT Y+ PE + + + K
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 293 SDVYSFGVLLFELIAGRSPLQ 313
+DV+S GV L+ ++ G P +
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFE 218
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
Y DL+ C G G V+ A + VA+K + Q K E+ ++ R
Sbjct: 13 YMDLKPLGC--------GGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 165 LHHRNLVNLVGYCAEKGQHM---------LVYVFMSKGSLASHLYDE-NYGPLTWNLRVH 214
L H N+V + G + L V++ + + + L + GPL
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124
Query: 215 IALDVARGLEYLHDGAVPPVIHRDIKSSNILLD-QSMRARVADFGLSREEMVDKHAANIR 273
+ RGL+Y+H V+HRD+K +N+ ++ + + ++ DFGL+R ++D H ++ +
Sbjct: 125 FMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLAR--IMDPHYSH-K 178
Query: 274 G-------TFGYLDPE-YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
G T Y P +S N+TK D+++ G + E++ G++ G E
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNL 173
+ ++GQGA V++ + TG+ A+KV S + Q E +L +L+H+N+V L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 174 VGYCAEKG--QHMLVYVFMSKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDG 229
E +L+ F GSL + L + + YG L + + + DV G+ +L +
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNHLREN 131
Query: 230 AVPPVIHRDIKSSNILL----DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
+ +HR+IK NI+ D ++ DFG +RE D+ + GT YL P+
Sbjct: 132 GI---VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYE 188
Query: 286 --------TRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ + D++S GV + G P +
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNL 173
+ ++GQGA V++ + TG+ A+KV S + Q E +L +L+H+N+V L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 174 VGYCAEKG--QHMLVYVFMSKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDG 229
E +L+ F GSL + L + + YG L + + + DV G+ +L +
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNHLREN 131
Query: 230 AVPPVIHRDIKSSNILL----DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYIS 285
+ +HR+IK NI+ D ++ DFG +RE D+ ++ GT YL P+
Sbjct: 132 GI---VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 286 --------TRNFTKKSDVYSFGVLLFELIAGRSPLQ 313
+ + D++S GV + G P +
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVK-VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+L+G+GA+G V A TGE VA+K + D E+ +L H N++ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIALDVARGLEYLHDGAVPPV 234
V++ + + + L+ + + + + R ++ LH V
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV--- 133
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLD--PEYISTR----- 287
IHRD+K SN+L++ + +V DFGL+R ++D+ AA+ G EY++TR
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 288 -------NFTKKSDVYSFGVLLFELIAGRSPLQG 314
+++ DV+S G +L EL R G
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVK-VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+L+G+GA+G V A TGE VA+K + D E+ +L H N++ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIALDVARGLEYLHDGAVPPV 234
V++ + + + L+ + + + + R ++ LH V
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV--- 133
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-------------IRGTFGYLDP 281
IHRD+K SN+L++ + +V DFGL+R ++D+ AA+ T Y P
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 282 E-YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
E +++ +++ DV+S G +L EL R G
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 56/249 (22%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVNL 173
IGQG++G V A + T A+K++ + + + + +TEV L+ +LHH N+ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 174 VGYCAEK-----------GQHML----VYVFMSKGSLASHLYDENYGPL------TWNLR 212
++ G H+L V++ S G A + P N
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 213 VH-----------------IALDVARGLEYLHDGAVPPVIHRDIKSSNILL--DQSMRAR 253
+H I + L YLH+ + HRDIK N L ++S +
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI---CHRDIKPENFLFSTNKSFEIK 210
Query: 254 VADFGLSREEMVDKHA-----ANIRGTFGYLDPEYISTRN--FTKKSDVYSFGVLLFELI 306
+ DFGLS+E + GT ++ PE ++T N + K D +S GVLL L+
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 307 AGRSPLQGL 315
G P G+
Sbjct: 271 MGAVPFPGV 279
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVK-VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
+L+G+GA+G V A TGE VA+K + D E+ +L H N++ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIALDVARGLEYLHDGAVPPV 234
V++ + + + L+ + + + + R ++ LH V
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV--- 133
Query: 235 IHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-------------IRGTFGYLDP 281
IHRD+K SN+L++ + +V DFGL+R ++D+ AA+ T Y P
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 282 E-YISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
E +++ +++ DV+S G +L EL R G
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 115 NFTTL----IGQGAFGPVYKA-QMSTGETVAVKVLATDSK----QGEKEFQTEVMLLGRL 165
NF L +G+G F V + STG+ A K L + + E + V+ L +
Sbjct: 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKS 87
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
R ++NL + +L+ + + G + S E ++ N + + + G+ Y
Sbjct: 88 CPR-VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSM---RARVADFGLSREEMVDKHAANIR---GTFGYL 279
LH + +H D+K NILL ++ DFG+SR+ HA +R GT YL
Sbjct: 147 LHQNNI---VHLDLKPQNILLSSIYPLGDIKIVDFGMSRK---IGHACELREIMGTPEYL 200
Query: 280 DPEYISTRNFTKKSDVYSFGVLLFELIAGRSPLQG 314
PE ++ T +D+++ G++ + L+ SP G
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 120 IGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G FG + E VAVK + K E + E++ L H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVIL 85
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+V + S G L + N G + + + G+ Y H V HRD
Sbjct: 86 TPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQV---CHRD 140
Query: 239 IKSSNILLDQSM--RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKK-SDV 295
+K N LLD S R ++ FG S+ ++ + GT Y+ PE + + + K +DV
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 296 YSFGVLLFELIAGRSPLQ 313
+S GV L+ ++ G P +
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVK-VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
++G GA G + M VAVK +L ++E Q +L H N++ +C
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQ---LLRESDEHPNVIRY--FC 85
Query: 178 AEKG-QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
EK Q + + + +L ++ +++ L + + GL +LH + +H
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNI---VH 141
Query: 237 RDIKSSNILLDQ-----SMRARVADFGLSREEMVDKHA----ANIRGTFGYLDPEYIS-- 285
RD+K NIL+ ++A ++DFGL ++ V +H+ + + GT G++ PE +S
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 286 -TRNFTKKSDVYSFGVLLFELIA-GRSPL 312
N T D++S G + + +I+ G P
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S GV++ E+I G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 120 IGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G FG + E VAVK + K E + E++ L H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVIL 85
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+V + S G L + N G + + + G+ Y H V HRD
Sbjct: 86 TPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQV---CHRD 140
Query: 239 IKSSNILLDQSM--RARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKK-SDV 295
+K N LLD S R ++ FG S+ ++ + GT Y+ PE + + + K +DV
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 296 YSFGVLLFELIAGRSPLQ 313
+S GV L+ ++ G P +
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S GV++ E+I G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 75 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 132 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 233
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 234 -----ECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 150
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDI 210
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 211 WSVGCIMGEMIKG 223
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 133 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 188
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 234
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 235 -----ECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 118 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 175 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 230
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 276
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 277 -----ECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 133 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 188
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 234
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 235 -----ECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 90 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 147 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 202
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 248
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 249 -----ECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 133 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 188
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 234
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 235 -----ECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 148 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 203
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 249
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 250 -----ECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQT----EVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE T EV+LL ++
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 110 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 167 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 222
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 268
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 269 -----ECQHLIRWCLALRPSDRPTFEEI 291
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KE 154
P K+ ++ L+G G FG VY ++S VA+K + D S GE
Sbjct: 21 PHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR 80
Query: 155 FQTEVMLLGRLH--HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWN 210
EV+LL ++ ++ L+ + +L+ + + L+D G L
Sbjct: 81 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEE 137
Query: 211 LRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHA 269
L V + + H+ V +HRDIK NIL+D + ++ DFG S + D
Sbjct: 138 LARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 193
Query: 270 ANIRGTFGYLDPEYISTRNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ GT Y PE+I + +S V+S G+LL++++ G P +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQT----EVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE T EV+LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 161 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 216
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + EEI+ ++ F
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD-----------------EEIIGGQV--FFR 257
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
+E L C+ P RP+ +I
Sbjct: 258 QRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 160 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 215
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 261
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 262 -----ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 74 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 131 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 186
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 232
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 233 -----ECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 128 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 229
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 230 -----ECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 160 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 215
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + EEI+ ++ F
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD-----------------EEIIGGQV--FFR 256
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
+E L C+ P RP+ +I
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 119 LIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH--------- 167
++GQGAFG V KA+ + + K+ T+ K +EV LL L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST--ILSEVXLLASLNHQYVVRYYAA 70
Query: 168 ----RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLT---WNLRVHIALDVA 220
RN V +K + + +L ++ EN W L I
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---- 126
Query: 221 RGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSRE-----EMVDKHAANIR-- 273
L Y+H + IHR++K NI +D+S ++ DFGL++ +++ + N+
Sbjct: 127 EALSYIHSQGI---IHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 274 --------GTFGYLDPEYIS-TRNFTKKSDVYSFGVLLFELI 306
GT Y+ E + T ++ +K D YS G++ FE I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 160 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 215
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + EEI+ ++ F
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD-----------------EEIIGGQV--FFR 256
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
+E L C+ P RP+ +I
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 75 VIRLLDWFERPDSFVLI---LERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 132 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + E + G+ + + V S
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQRVSS------- 233
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
E L C+ P RP+ +I
Sbjct: 234 -----ECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 161 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 216
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + EEI+ ++ F
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD-----------------EEIIGGQV--FFR 257
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
+E L C+ P RP+ +I
Sbjct: 258 QRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 90 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 147 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 202
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 128 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQGLMEYVELAAMNTEGKTGWEEIVDSRLDGIFD 345
+ +S V+S G+LL++++ G P + EEI+ ++ F
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD-----------------EEIIGGQV--FFR 224
Query: 346 VEELNEVASLAYKCVNRAPRKRPSMRDI 373
+E L C+ P RP+ +I
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQT----EVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE T EV+LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 148 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 203
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 148 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 203
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 149
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 210 WSVGCIMGEMIKG 222
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 118 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 175 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 230
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 161 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 216
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 160 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 215
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 161 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 216
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 128 NXGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G++ + +T AVK++ + +E + +LL H N++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYD 86
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
+ +V M G L + + + + + + + +EYLH V +HRD
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQGV---VHRD 141
Query: 239 IKSSNIL-LDQSMRA---RVADFGLSREE-------MVDKHAANIRGTFGYLDPEYISTR 287
+K SNIL +D+S R+ DFG +++ M + AN ++ PE + +
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN------FVAPEVLERQ 195
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
+ D++S GVLL+ ++ G +P
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGE----KEFQTEVMLLGRLH--HRN 169
L+G G FG VY ++S VA+K + D S GE EV+LL ++
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
++ L+ + +L+ + + L+D G L L V + + H
Sbjct: 123 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 228 DGAVPPVIHRDIKSSNILLDQSM-RARVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
+ V +HRDIK NIL+D + ++ DFG S + D + GT Y PE+I
Sbjct: 180 NCGV---LHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 235
Query: 287 RNFTKKS-DVYSFGVLLFELIAGRSPLQ 313
+ +S V+S G+LL++++ G P +
Sbjct: 236 HRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAG 308
+S G ++ E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 176 YCAEKG--QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR----------GL 223
+ +K + VY+ M L D N + + + LD R G+
Sbjct: 92 FTPQKSLEEFQDVYIVME-------LMDANLSQV-----IQMELDHERMSYLLYQMLCGI 139
Query: 224 EYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEY 283
++LH + IHRD+K SNI++ ++ DFGL+R T Y PE
Sbjct: 140 KHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 284 ISTRNFTKKSDVYSFGVLLFELIAG 308
I + + D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 120 IGQGAFGPVYKA-----------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+G GAFG V+ A + E V D K G+ E+ +L R+ H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK--VTLEIAILSRVEHA 89
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
N++ ++ +G LV G L + + + L L +I + + YL
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR- 147
Query: 229 GAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRN 288
+ +IHRDIK NI++ + ++ DFG + K GT Y PE +
Sbjct: 148 --LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNP 205
Query: 289 FT-KKSDVYSFGVLLFELIAGRSPLQGLMEYVELA 322
+ + +++S GV L+ L+ +P L E VE A
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENPFCELEETVEAA 240
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
IG G++ + +T AVK++ + +E + +LL H N++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKD-VY 85
Query: 179 EKGQHMLVYVFMSKGS-LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHR 237
+ G+++ V + KG L + + + + + + + +EYLH V +HR
Sbjct: 86 DDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQGV---VHR 140
Query: 238 DIKSSNIL-LDQSMRA---RVADFGLSREEMVDKHAANIRG-TFGYLDPEYISTRNFTKK 292
D+K SNIL +D+S R+ DFG +++ + T ++ PE + + +
Sbjct: 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAA 200
Query: 293 SDVYSFGVLLFELIAGRSPL 312
D++S GVLL+ + G +P
Sbjct: 201 CDIWSLGVLLYTXLTGYTPF 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR---NLVNLV 174
+IG+G+FG V KA + VA+K + + K+ ++ E+ +L L + N +N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALK-MVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 175 GYCAEKGQHMLV------YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLE 224
HML ++ M+ L+ +LY+ + + L A + + L+
Sbjct: 163 --------HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPE 282
LH + IH D+K NILL Q R+ +V DFG S E + I+ F Y PE
Sbjct: 215 ALHKNRI---IHCDLKPENILLKQQGRSGIKVIDFGSSCYEH-QRVYTXIQSRF-YRAPE 269
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAM 324
I + D++S G +L EL+ G L G E +LA M
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACM 311
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDS-------KQGEKEFQTEVMLLGRLHHRNLV 171
L+G+G++G V ++ ET+ + + GE + E+ LL RL H+N++
Sbjct: 12 LLGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 172 NLVG--YCAEKGQHMLV--YVFMSKGSLASHLYDENYGPLTWNLRVH-IALDVARGLEYL 226
LV Y EK + +V Y + + ++ + P+ + H + GLEYL
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF-PVC---QAHGYFCQLIDGLEYL 125
Query: 227 HDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAN-----IRGTFGYLDP 281
H ++H+DIK N+LL +++ G++ E + AA+ +G+ + P
Sbjct: 126 HSQG---IVHKDIKPGNLLLTTGGTLKISALGVA--EALHPFAADDTCRTSQGSPAFQPP 180
Query: 282 EYISTRN-FTK-KSDVYSFGVLLFELIAGRSPLQG 314
E + + F+ K D++S GV L+ + G P +G
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+LIG+G+FG V KA E VA+K++ + K + Q EV LL L +++ + Y
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLL-ELMNKHDTEMKYY 98
Query: 177 CAEKGQHMLV--YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYLHDGA 230
+H + ++ + L+ +LYD N+ ++ NL A + L +L A
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL---A 155
Query: 231 VP--PVIHRDIKSSNILLDQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
P +IH D+K NILL R+ ++ DFG S ++ + I+ F Y PE +
Sbjct: 156 TPELSIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQXIQSRF-YRSPEVLLG 213
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ D++S G +L E+ G G E
Sbjct: 214 MPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+LIG+G+FG V KA E VA+K++ + K + Q EV LL L +++ + Y
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLL-ELMNKHDTEMKYY 117
Query: 177 CAEKGQHMLV--YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYLHDGA 230
+H + ++ + L+ +LYD N+ ++ NL A + L +L A
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL---A 174
Query: 231 VP--PVIHRDIKSSNILLDQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
P +IH D+K NILL R+ ++ DFG S ++ + I+ F Y PE +
Sbjct: 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQXIQSRF-YRSPEVLLG 232
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ D++S G +L E+ G G E
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR---NLVNLV 174
+IG+G+FG V KA + VA+K + + K+ ++ E+ +L L + N +N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALK-MVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 175 GYCAEKGQHMLV------YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLE 224
HML ++ M+ L+ +LY+ + + L A + + L+
Sbjct: 163 --------HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPE 282
LH + IH D+K NILL Q R+ +V DFG S E + I+ F Y PE
Sbjct: 215 ALHKNRI---IHCDLKPENILLKQQGRSGIKVIDFGSSCYEH-QRVYTXIQSRF-YRAPE 269
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAM 324
I + D++S G +L EL+ G L G E +LA M
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACM 311
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
++G G G V + TG+ A+K+L DS + +E G H ++++
Sbjct: 17 VLGLGVNGKVLECFHRRTGQKCALKLLY-DSPKARQEVDHHWQASGGPHIVCILDVYENM 75
Query: 178 AEKGQHMLVYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ +L+ + M G L S + + T I D+ +++LH + H
Sbjct: 76 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI---AH 132
Query: 237 RDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKS 293
RD+K N+L ++ ++ DFG ++E + + Y+ PE + + K
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVLGPEKYDKSC 191
Query: 294 DVYSFGVLLFELIAGRSPL 312
D++S GV+++ L+ G P
Sbjct: 192 DMWSLGVIMYILLCGFPPF 210
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR---NLVNLV 174
+IG+G FG V KA + VA+K + + K+ ++ E+ +L L + N +N++
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALK-MVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 175 GYCAEKGQHMLV------YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLE 224
HML ++ M+ L+ +LY+ + + L A + + L+
Sbjct: 163 --------HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPE 282
LH + IH D+K NILL Q R+ +V DFG S E + I+ F Y PE
Sbjct: 215 ALHKNRI---IHCDLKPENILLKQQGRSGIKVIDFGSSCYEH-QRVYXXIQSRF-YRAPE 269
Query: 283 YISTRNFTKKSDVYSFGVLLFELIAGRSPLQGLMEYVELAAM 324
I + D++S G +L EL+ G L G E +LA M
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACM 311
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+LIG+G+FG V KA E VA+K++ + K + Q EV LL L +++ + Y
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLL-ELMNKHDTEMKYY 117
Query: 177 CAEKGQHMLV--YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYLHDGA 230
+H + ++ + L+ +LYD N+ ++ NL A + L +L A
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL---A 174
Query: 231 VP--PVIHRDIKSSNILLDQSMRA--RVADFGLSREEMVDKHAANIRGTFGYLDPEYIST 286
P +IH D+K NILL R ++ DFG S ++ + I+ F Y PE +
Sbjct: 175 TPELSIIHCDLKPENILLCNPKRXAIKIVDFG-SSCQLGQRIYQXIQSRF-YRSPEVLLG 232
Query: 287 RNFTKKSDVYSFGVLLFELIAGRSPLQGLME 317
+ D++S G +L E+ G G E
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 153
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 296 YSFGVLLFELIAGRSPLQG 314
+S G ++ E++ + G
Sbjct: 214 WSVGCIMGEMVCHKILFPG 232
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
++G G G V + TG+ A+K+L DS + +E G H ++++
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLY-DSPKARQEVDHHWQASGGPHIVCILDVYENM 94
Query: 178 AEKGQHMLVYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIH 236
+ +L+ + M G L S + + T I D+ +++LH + H
Sbjct: 95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI---AH 151
Query: 237 RDIKSSNILL---DQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKS 293
RD+K N+L ++ ++ DFG ++E + + Y+ PE + + K
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVLGPEKYDKSC 210
Query: 294 DVYSFGVLLFELIAGRSPL 312
D++S GV+++ L+ G P
Sbjct: 211 DMWSLGVIMYILLCGFPPF 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 209 WSVGCIMGEMV 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 142
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 202
Query: 296 YSFGVLLFELIAGRSPLQG 314
+S G ++ E++ + G
Sbjct: 203 WSVGCIMGEMVCHKILFPG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 186
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 247 WSVGCIMGEMV 257
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELIAGRSPLQG 314
+S G ++ E++ + G
Sbjct: 209 WSVGCIMGEMVCHKILFPG 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 209 WSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 209 WSVGCIMGEMV 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 215 IALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDK--HAANI 272
IA+D L Y +HRDIK NIL+D + R+ADFG + M D ++
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 273 RGTFGYLDPEYISTRN-----FTKKSDVYSFGVLLFELIAGRSPL 312
GT Y+ PE + + + D +S GV ++E++ G +P
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI---I 141
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 202 WSVGCIMGEMV 212
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 209 WSVGCIMGEMV 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLHHRNLVNLV 174
T +G+G +G VYKA T ETVA+K + + ++ EV LL L HRN++ L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPV 234
+ L++ + ++ L ++ D+N ++ + + G+ + H
Sbjct: 100 SVIHHNHRLHLIFEY-AENDLKKYM-DKNPD-VSMRVIKSFLYQLINGVNFCHSRR---C 153
Query: 235 IHRDIKSSNILLDQSMRA-----RVADFGLSREEMVD-KHAANIRGTFGYLDPE-YISTR 287
+HRD+K N+LL S + ++ DFGL+R + + + T Y PE + +R
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 288 NFTKKSDVYSFGVLLFELIAGRSPL 312
+++ D++S + E++ ++PL
Sbjct: 214 HYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 209 WSVGCIMGEMV 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 209 WSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 149
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 210 WSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 147
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 207
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 208 WSVGCIMGEMV 218
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 186
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 247 WSVGCIMGEMV 257
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 149
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 210 WSVGCIMGEMV 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + E VA+K L+ ++ K E++L+ ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 148
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDL 208
Query: 296 YSFGVLLFELIAGRSPLQG 314
+S G ++ E++ + G
Sbjct: 209 WSVGCIMGEMVCHKILFPG 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 142
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 203 WSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 142
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 203 WSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 120 IGQGAFGPVYKAQMSTGE-TVAVKVLAT--DSKQGEKEFQTEVMLLGRLHHRNLVNLVG- 175
IG GA G V A + + VA+K L+ ++ K E++L+ ++H+N+++L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVI 235
+ +K V++ + ++L L ++ + G+++LH + I
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI---I 141
Query: 236 HRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANIRGTFGYLDPEYISTRNFTKKSDV 295
HRD+K SNI++ ++ DFGL+R T Y PE I + + D+
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 296 YSFGVLLFELI 306
+S G ++ E++
Sbjct: 202 WSVGCIMGEMV 212
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
LIG+G++G VY A +T + VA+K + + K E+ +L RL ++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 176 YCAE----KGQHMLVYVFMSKGSLAS------HLYDENYGPLTWNLRVHIALDVARGLEY 225
K + + + ++ L L +E+ + +NL + G +
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLL--------GENF 144
Query: 226 LHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSR----------------EEMVDKHA 269
+H+ + IHRD+K +N LL+Q +V DFGL+R E H
Sbjct: 145 IHESGI---IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 270 ANIRG-------TFGYLDPEYISTR-NFTKKSDVYSFGVLLFELI 306
N++ T Y PE I + N+TK D++S G + EL+
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G+G+FG V++ + TG AVK + + + E E+M L +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
E G + +++ + +G L E G L + ++ GLEYLH + +H D
Sbjct: 137 E-GPWVNIFMELLEGGSLGQLVKEQ-GCLPEDRALYYLGQALEGLEYLHSRRI---LHGD 191
Query: 239 IKSSNILLDQ-SMRARVADFGLSREEMVDKHAAN------IRGTFGYLDPEYISTRNFTK 291
+K+ N+LL A + DFG + D + I GT ++ PE + R+
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDA 251
Query: 292 KSDVYSFGVLLFELIAGRSP 311
K DV+S ++ ++ G P
Sbjct: 252 KVDVWSSCCMMLHMLNGCHP 271
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G+G+FG V++ + TG AVK + + + E E+M L +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGAVPPVIHRD 238
E G + +++ + +G L E G L + ++ GLEYLH + +H D
Sbjct: 156 E-GPWVNIFMELLEGGSLGQLVKEQ-GCLPEDRALYYLGQALEGLEYLHSRRI---LHGD 210
Query: 239 IKSSNILLDQ-SMRARVADFGLSREEMVDKHAAN------IRGTFGYLDPEYISTRNFTK 291
+K+ N+LL A + DFG + D + I GT ++ PE + R+
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDA 270
Query: 292 KSDVYSFGVLLFELIAGRSP 311
K DV+S ++ ++ G P
Sbjct: 271 KVDVWSSCCMMLHMLNGCHP 290
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKE-FQTEVMLLGR 164
LQ+ +IG+GAF V +M TG+ A+K++ K+GE F+ E +L
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN 117
Query: 165 LHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
R + L ++ LV + G L + L R ++A ++ ++
Sbjct: 118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAID 176
Query: 225 YLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAANI--RGTFGYLDPE 282
+H +HRDIK NILLD+ R+ADFG + D ++ GT YL PE
Sbjct: 177 SVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233
Query: 283 YIST-------RNFTKKSDVYSFGVLLFELIAGRSPL 312
+ ++ + D ++ GV +E+ G++P
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,941,381
Number of Sequences: 62578
Number of extensions: 488358
Number of successful extensions: 3861
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 1119
Number of HSP's gapped (non-prelim): 1146
length of query: 432
length of database: 14,973,337
effective HSP length: 102
effective length of query: 330
effective length of database: 8,590,381
effective search space: 2834825730
effective search space used: 2834825730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)